kaikay - br.caltech.edu
TRANSCRIPT
Lecture of 22 January 2020 (no lecture 20 January - MLK day)Outline of today's lecture
Statistical factors and cooperativity•Dicarboxylic acids and cooperativity •Activities•
Ka KanH2A F HA a f Eady
CHAIHut CA
Ht Ht
Gta CHA CA
Oxalic acidi correctedi figure from A02C COzHi i
lecturepka pka pka 1.23
pKa 4.19
species CHA ITA At
termini 1 Kathy Kaikaydenominator Ht
KaObs 910 oxalic acid
Kaiexpect za 4 for identical independent sites
carboxylate groups are notindependent
4 statistical factor
Useof Kafka to probe interaction betweenbinding sites
start with I E tyt2 Ya
at 2
3 examples with b
Hua Htt Ai KafkaCHA7µACAA 0 100 0 as
B 50 O 50 O
C 251 50 25 4
CA negative cooperative ETS 4
CB positive coops all or none a 41Cc stathstead behaviors K 4
caution the significanceof theratio depends on how K's are defined
Di protec vs monoprotec acid
conc 2 Co of monoprotic and with 1 carboxylgroup
in s ka dissoc constf It YET
Hw diprotic acid with 2 carboxyIs in a
singlehypotheticalmolecule identicalhw and independent non interactingConc Co
twoa E FETsttEIT.TK lgdcssoc
z constants
at E YYIthese two expressions ka 2 kafor h are equivalent if ka bag 4
check
ti i ii Idenomination for n idential independent sites
Gthft a ltnckjgxnhzDlehf.ITa r
It Effy KaikanHDL X
n n
dicarboxylic
tHAC CCHDncouH
O H oy Itami Y5
ka C C Ka foroxalica vO O andmalonicacids
Ka 2haka r n
Hoy CHIN Cont HEC Cata nKau
Hae CHIN WI E 02C CCHulu CdiCr
solvation repulsionG for firststep cdeprotonation
Gz for secondstep t Get
Ge 1389 22Ga G Tree Hml
ha Kayz ka 2 Kar
RThrkaz t RTlnkal Geta RT en Koe
4kg Get
originally analyzedby John Kirkwood
1389 GI Empiricalmodelinge CA Fitofc Coulomb's
RTenkai4km law type equationE 50
with effective dielectricconstant 50water 80
n
r 1.33n t 2 CA separation betweenchargesas a
functionof h GACS111,8238194
Activitiesnon idealeffects important for chargedmolecules
H Ac Htt Ai pKa 4.75additionof NaCl Nat Ce
shifts equilibrant rightandlowerspKaaccurate description at low concestneyk
Ht Ai concentrationKa HAC
Koi activitiesAHAc A 3 C
Ht Ai 7 2 5It t ka
non idealeffects