Upload File

january 25, 2008. current and future database (ch) indexing vgd_common (jm; 1q) fully implement...

  • Home
  • Documents
  • January 25, 2008. Current and Future Database (CH) Indexing vgd_common (JM; 1Q) Fully implement Taxonomy tables (JO, DD; 2Q) Allow subspecies-level
27
January 25, 2008

Upload: ruth-mccormick

Post on 18-Dec-2015

214 views

Category:

Documents


1 download

Report

Tags:

TRANSCRIPT

Page 1: January 25, 2008. Current and Future Database (CH) Indexing vgd_common (JM; 1Q) Fully implement Taxonomy tables (JO, DD; 2Q) Allow subspecies-level

January 25, 2008

Page 2: January 25, 2008. Current and Future Database (CH) Indexing vgd_common (JM; 1Q) Fully implement Taxonomy tables (JO, DD; 2Q) Allow subspecies-level

Current and Future

Page 3: January 25, 2008. Current and Future Database (CH) Indexing vgd_common (JM; 1Q) Fully implement Taxonomy tables (JO, DD; 2Q) Allow subspecies-level
Page 4: January 25, 2008. Current and Future Database (CH) Indexing vgd_common (JM; 1Q) Fully implement Taxonomy tables (JO, DD; 2Q) Allow subspecies-level

Database (CH)

Indexing vgd_common (JM; 1Q) Fully implement Taxonomy tables

(JO, DD; 2Q) Allow subspecies-level taxonomy Fix Dengue Fix HCV

Fully update Pluto.vgd_common with all patches (CH)

Page 5: January 25, 2008. Current and Future Database (CH) Indexing vgd_common (JM; 1Q) Fully implement Taxonomy tables (JO, DD; 2Q) Allow subspecies-level
Page 6: January 25, 2008. Current and Future Database (CH) Indexing vgd_common (JM; 1Q) Fully implement Taxonomy tables (JO, DD; 2Q) Allow subspecies-level

Data (CH)

Data releases Data Release 6.4 (JM; 1Q) Data Release 6.5 (SC; 2Q)

Continuous data release (JM; 4Q) Replication between Pluto and Gendb

Databases Automated annotation Correct handling of “missing”

information by web site

Page 7: January 25, 2008. Current and Future Database (CH) Indexing vgd_common (JM; 1Q) Fully implement Taxonomy tables (JO, DD; 2Q) Allow subspecies-level

Reference Genomes (CH)

Define Curated strain RefSeq strain

Links from all VOCs orthologs Links to RefSeq and VBRC reference

Page 8: January 25, 2008. Current and Future Database (CH) Indexing vgd_common (JM; 1Q) Fully implement Taxonomy tables (JO, DD; 2Q) Allow subspecies-level
Page 9: January 25, 2008. Current and Future Database (CH) Indexing vgd_common (JM; 1Q) Fully implement Taxonomy tables (JO, DD; 2Q) Allow subspecies-level

BLAST (JM)

VBRC BLAST Processes (JM) Reevaluate process of storing all BLAST

data (2Q) Separate BLAST data into new db (2Q)

Add views to vgd_common Reassess BLAST XML Parsing tools

HCV BLAST (JO) Update HCV BLAST db (1Q) Move HCV BLAST from mars to VBRC

(2Q)

Page 10: January 25, 2008. Current and Future Database (CH) Indexing vgd_common (JM; 1Q) Fully implement Taxonomy tables (JO, DD; 2Q) Allow subspecies-level

Protein information (JM, SC) Generate all figures on-the-fly

Genome maps (1Q) Hydrophobicity plots (3Q)

Get rid of dependence on GCG (3Q) Display aa location of any motif hit (2Q) Epitopes (SC)

Evaluate HCV epitopes: Why so many (JO) Epitope identification by taxonomy (2Q)

EC numbers (SC; 2Q) Polymerase Protease

Page 11: January 25, 2008. Current and Future Database (CH) Indexing vgd_common (JM; 1Q) Fully implement Taxonomy tables (JO, DD; 2Q) Allow subspecies-level

HCV annotation (JO)

HCV genotyping Alignments

Generate View

Trees Generate View

Manual method for genotyping (2Q) Automated genotyping (4Q)

Page 12: January 25, 2008. Current and Future Database (CH) Indexing vgd_common (JM; 1Q) Fully implement Taxonomy tables (JO, DD; 2Q) Allow subspecies-level

KDB (DD)

In production (1Q) Tie in with vgd_common (2Q)

Table/field relationships Annotation statistics updates

Page 13: January 25, 2008. Current and Future Database (CH) Indexing vgd_common (JM; 1Q) Fully implement Taxonomy tables (JO, DD; 2Q) Allow subspecies-level

UVic annotation pipeline (CH; 2Q) VOCs

Better annotation InterPro

Identify location DO NOT delete genome/gene IDs

Page 14: January 25, 2008. Current and Future Database (CH) Indexing vgd_common (JM; 1Q) Fully implement Taxonomy tables (JO, DD; 2Q) Allow subspecies-level

Curation (EK; continuous) Gene names

Consistent Meaningful Coordinate names in KDB with

vgd_common (CH, DD)

Page 15: January 25, 2008. Current and Future Database (CH) Indexing vgd_common (JM; 1Q) Fully implement Taxonomy tables (JO, DD; 2Q) Allow subspecies-level

Controlled vocabularies (JO; 2008-2009) GO SO

Page 16: January 25, 2008. Current and Future Database (CH) Indexing vgd_common (JM; 1Q) Fully implement Taxonomy tables (JO, DD; 2Q) Allow subspecies-level
Page 17: January 25, 2008. Current and Future Database (CH) Indexing vgd_common (JM; 1Q) Fully implement Taxonomy tables (JO, DD; 2Q) Allow subspecies-level

Genome search and display(JO; 2008-2009) New search interface

Combine genome and gene Visualization

Genome maps Search results Variation Features

Epitopes Functional motifs

Page 18: January 25, 2008. Current and Future Database (CH) Indexing vgd_common (JM; 1Q) Fully implement Taxonomy tables (JO, DD; 2Q) Allow subspecies-level
Page 19: January 25, 2008. Current and Future Database (CH) Indexing vgd_common (JM; 1Q) Fully implement Taxonomy tables (JO, DD; 2Q) Allow subspecies-level

Web site (JM)

Genome maps (1Q) Create all on-the-fly

Add contract # to web site (1Q) Update documents (1Q)

July 2007 Progress Report Bug fixes (2Q) How well do filters handle taxonomy

updates/changes? (CH, DD; 2Q)

Page 20: January 25, 2008. Current and Future Database (CH) Indexing vgd_common (JM; 1Q) Fully implement Taxonomy tables (JO, DD; 2Q) Allow subspecies-level
Page 21: January 25, 2008. Current and Future Database (CH) Indexing vgd_common (JM; 1Q) Fully implement Taxonomy tables (JO, DD; 2Q) Allow subspecies-level

Help (JM, CG)

Online (1Q) Tutorials (3Q)

Page 22: January 25, 2008. Current and Future Database (CH) Indexing vgd_common (JM; 1Q) Fully implement Taxonomy tables (JO, DD; 2Q) Allow subspecies-level
Page 23: January 25, 2008. Current and Future Database (CH) Indexing vgd_common (JM; 1Q) Fully implement Taxonomy tables (JO, DD; 2Q) Allow subspecies-level

IOWG (EJL, CH)

Annotation Lists (1Q) GFF3 File formats (2Q)

Properly annotate mature peptides Properly annotate RNA processing

Page 24: January 25, 2008. Current and Future Database (CH) Indexing vgd_common (JM; 1Q) Fully implement Taxonomy tables (JO, DD; 2Q) Allow subspecies-level

HCV (EJL)

Add LANL HCV advisory members to SWG (1Q)

Genome information (2Q) Contact SLU for data

Page 25: January 25, 2008. Current and Future Database (CH) Indexing vgd_common (JM; 1Q) Fully implement Taxonomy tables (JO, DD; 2Q) Allow subspecies-level

ICTVdb (EJL)

Create link-outs (3Q)

Page 26: January 25, 2008. Current and Future Database (CH) Indexing vgd_common (JM; 1Q) Fully implement Taxonomy tables (JO, DD; 2Q) Allow subspecies-level

NCBI Interactions (CH)

Links GenBank record parsing

Page 27: January 25, 2008. Current and Future Database (CH) Indexing vgd_common (JM; 1Q) Fully implement Taxonomy tables (JO, DD; 2Q) Allow subspecies-level

Next Group Meeting

February 8th, 2008 2:30 – 4:30 AIDS Center Conference Room, BBRB

Room 256A Topic

KDB Presenter

Don Dempsey


PowerPoint Presentation...15-89 calendar days past due 10.9% 11.2% 11.1% 12.0% 12.2% 1Q '18 2Q '18 3Q '18 4Q '18 1Q '19 2.8x 2.7x 2.8x 2.7x 2.7x 1Q '18 2Q '18 3Q '18 4Q '18 1Q '19

Financial Results Presentation for the 3Q of FY2017...1Q 2Q 3Q 4Q 1Q 2Q 3Q 4Q 1Q 2Q 3Q Apparel inventory (left) Apparel GPM (right) (Billions of ¥) Past three years’ apparel inventory

Blackstone’s Second Quarter 2020 Supplemental Financial Data · Private Equity Year-to-Date ($ in thousands) 1Q'18 2Q'18 3Q'18 4Q'18 1Q'19 2Q'19 3Q'19 4Q'19 1Q'20 2Q'20 2Q'19 2Q'20

Nomura Holdings Investors' Day Presentation …...Recap 2 FY2008/09 FY2009/10 FY2010/11 FY2011/12 FY2012/13 4Q 1Q 2Q 3Q 4Q 1Q 2Q 3Q 4Q 1Q 2Q 3Q 4Q 1Q (billions of yen) (yen) Mar 4

Financial Results Briefing for the Fiscal Year Ended …pdf.irpocket.com/C8793/VuON/jIvx/pkVD.pdf-20-10 0 10 20 30 40 50 60 13/1Q 13/2Q 13/3Q 13/4Q 14/1Q 14/2Q 14/3Q 14/4Q 15/1Q 15/2Q

Panel Discussion Recent M&A Trends and Future Outlook · 2019-12-19 · 1Q 2014 2Q 2014 3Q 2014 4Q 2014 1Q 2015 2Q 2015 3Q 2015 4Q 2015 1Q 2016 2Q 2016 $ s Source: Thomson US Oil

FYE03/2003 1H Financial Results · FYE 03/2001 1Q 2Q 3Q 4Q FYE 03/2002 1Q 2Q 3Q 4Q FYE 03/2003 1Q 2Q Operating Revenue SGA Operating Revenue Breakdown 100%＝641(Yen million） 551

Blackstone’s 4Q’19 Supplemental Financial Data · Total Segments (Dollars in Thousands) 1Q'17 2Q'17 3Q'17 4Q'17 1Q'18 2Q'18 3Q'18 4Q'18 1Q'19 2Q'19 3Q'19 4Q'19 Management and

Pershing-Sqr-1Q-2Q-2014-Investor-Letter-1 (1)

OECD-NEA Perspective on Data EC Workshop: Medical … · 2019-02-19 · Quarter 1), 2). 1Q 2Q 3Q 4Q 1Q 2Q 3Q 4Q 1Q 2Q 3Q 4Q 1Q 2Q 3Q 4Q 1Q 2Q 3Q 4Q 1Q 2Q 3Q 4Q Number of Weeks of

FY2017 1Q - Amazon S3...25% 30% 0 1,000 2,000 3,000 4,000 5,000 6,000 7,000 8,000 9,000 FY2015 1Q FY2015 2Q FY2015 3Q FY2015 4Q FY2016 1Q FY2016 2Q FY2016 3Q FY2016 4Q FY2017 1Q （million¥）

Capital Financing – Trends and Realities...2014/04/14  · 2012 2013 2014 1Q 2Q 3Q 4Q 1Q 2Q 3Q 4Q 1Q 2Q 3Q 4Q Real GDP4 3.7 1.2 2.8 0.1 1.1 2.5 4.1 2.4 1.1 2.6 2.9 3.1 Unemployment

Intralinks Deal Flow Predictor › sites › default › files › ... · 2011 2Q 2011 3Q 2011 4Q 2011 1Q 2012 2Q 2012 3Q 2012 4Q 2012 1Q 2013 2Q 2013 3Q 2013 4Q 2013 1Q 2014 2Q

QUARTERLY REPORT 2Q 2007 - KBC.com · 2Q 2007 / In millions of EUR 2Q 2006 1Q 2007 2Q 2007 1Q 2007 2Q 2007 / 2Q 2006 Earnings release highlights: • Solid business dynamics in all

Blackstone’s 1Q’17 Supplemental Financial Data · Financial Advisory Last Twelve Months (Dollars in Thousands) 1Q'15 2Q'15 3Q'15 4Q'15 1Q'16 2Q'16 3Q'16 4Q'16 1Q'17 1Q'16 1Q'17

Seadrill Partners LLC - Seeking Alpha · 2/8/2016  · 2016 2017 2018 4Q 1Q 2Q 3Q 4Q 1Q 2Q 3Q 4Q 1Q 2Q 3Q 2020 1Q 2019 2Q 3Q 4Q 2Q 3Q 4Q 7 (1) (1) West Capella distributions based

AVC Networks Company Midterm Strategy - Panasonic · PDF file100% 1Q 2Q 3Q 4Q 1Q 2Q 3Q 4Q 1Q 2Q 3Q 4Q 100% 50% 0% Q1 Q2 Q3 Q4 For TVs For Non-TVs FY14 80% FY12 FY13 FY14 9/27.

Blackstone’s 4Q’16 Supplemental Financial Data Segments Year-to-Date (Dollars in Thousands) 1Q'14 2Q'14 3Q'14 4Q'14 1Q'15 2Q'15 3Q'15 4Q'15 1Q'16 2Q'16 3Q'16 4Q'16 4Q'15 4Q'16

Analysts - Pacific Basin Shipping Limited · Q1 Q2 Q3 Q4 1Q 2Q 3Q 4Q 2008 2009 1Q 2Q 3Q4Q 2010 1Q 2011 2Q 3Q 4Q 2012E -15 -10 -5 0 5 10 15 20 25 Q1 6.5% China coastal cargo, off-hire

SBI Holdings, Inc. 2009 Information Meeting · 2013. 7. 8. · 78 0 20 40 60 80 100 120 1Q 2Q 3Q 4Q 1Q 2Q 3Q 4Q 1Q 2Q 3Q 4Q 0 100 200 300 400 500 600 700 800 900 ... (1.4 bil yen

FY2020 Financial Results...CV-Japan Full-scale decline expected in 2Q (YoY 1Q-90％, 2Q-60％, 3Q-80％, 4Q-90％) CV-Overseas Forecasting the worst at 1Q, slight recovery from 2Q

Alpek 3Q19 Earnings Presentation · 2012 2013 2014 1Q 3Q 4Q 1Q 2Q 3Q 4Q 3Q 324 1Q 2Q 3Q 260 4Q 276 1Q 342 2Q PET PTA 393 248 333 255 2011 227 212 210 240 277 284 478 377 304 370

EBARA (6361) · March 31, 2015 FY ending March 31, 2016 1Q 2Q 3Q 4Q 1Q 2Q 3Q 4Q 0.3 1.0 3.0 6.2 0.1 1.4 FY ended March 31, 2015 FY ending March 31, 2016 1Q 2Q 3Q 4Q 1Q 2Q 3Q 4Q (unit：¥bn)

Tier 2 Fixed Income Roadshow - Deutsche Bank€¦ · 1Q 2Q 3Q 4Q 1Q (256) 2012 2013 2012 2013 (599) 1Q 2Q 3Q 4Q 1Q Deutsche Bank Tier 2 Fixed Income Roadshow Treasury / Investor Relations

Clean Energy Auctions · 2 New EU renewables investment 1Q 2005 – 1Q 2018 0 5 10 15 20 25 30 35 40 45 50 1Q 2Q 3Q 4Q 1Q 2Q 3Q 4Q 1Q 2Q 3Q 4Q 1Q 2Q 3Q 4Q 1Q 2Q 3Q 4Q 1Q 2Q 3Q 4Q

TECHNOLOGY ON THE HORIZON3Q 00 4Q 00 1Q 01 2Q 01 2Q 01 4Q 01 1Q 02 2Q 02 3Q 02 4Q 02 1Q 03 2Q 03 3Q 03 4Q 03 1Q 04 2Q 04 B illions $ Source: U.S. Census Bureau, 2004 Estimated Quarterly

3Q FY2016 Presentation Material€¦ · 1Q 2Q 3Q 4Q 1Q 2Q 3Q 4Q 1Q 2Q 3Q 4Q 1Q 2Q 3Q 4Q 1Q 2Q 3Q 4Q 1Q 2Q 3Q 4Q 1Q 2Q 3Q FY2010 FY2011 FY2012 FY2013 FY2014 FY2015 FY2016. Unit: billion

Seadrill Partners LLC...2Q 3Q 4Q 2Q 3Q 4Q 2016 2017 2018 1Q 2Q 3Q 4Q 1Q 2Q 3Q 4Q 1Q 2Q 3Q 4Q 1Q 7 (1) (1) West Capella distributions based on dayrate of US$562,000 (2) West Sirius

Investor presentation 2Q 2017 Results · 2020-04-17 · 2015 2016 1Q 2017 2Q 2017 1,136 1,171 1,118 1,176 2015 2016 1Q 2017 2Q 2017 2Q 2017 and 1H 2017 Operating Results Totals rounded

FY2015 for the 1st Quarter Financial Results …...Quarterly change Year-on-year comparison 0 100 200 300 400 500 1Q 2Q 3Q 4Q 1Q 2Q 3Q 4Q 1Q 0 100 200 300 400 500 1Q 2Q 3Q 4Q 2013年9月期

Challenges from stabilization ation to to growth 2Q 3Q 4Q 1Q 2Q 3Q 4Q 1Q 2Q 3Q 4Q 1Q 2Q 3Q 4Q 1Q 2Q 3Q 4Q Others Industrial Automation Info. & Comm. Test & Measurement Orders by business

Nihon Enterprise Co., Ltd.1Q 2Q 3Q 4Q 1Q 2Q 3Q 4Q 1Q 2Q 3Q 4Q Solutions Segment Mobile Content Segment 902 569 632 Continue to Increase Sales 611 631 612 716 830 FY 5/11 557 1,004

Earnings Presentation 3QFY16 - Sunshine Holdings€¦ · Earnings Presentation 3QFY16 11th February 2016. Forward Looking Statements ... 1Q FY14 2Q FY14 3Q FY14 4Q FY14 1Q FY15 2Q

13 April 2016 Serving Britain's shoppers a little better every day - Home - Tesco PLC · 1Q 2Q 3Q 4Q 1Q 2Q 3Q 4Q 1Q 2Q 3Q 4Q 2013/14 2014/15 2015/16 Year-on-year change in UK transactions

2Q 2017 EARNINGS PRESENTATION - JetBlueinvestor.jetblue.com/~/media/Files/J/Jetblue-IR-V2/reports-and... · 1Q 2016 2Q 2016 3Q 2016 4Q 2016 1Q 2017 2Q 2017 3Q 2017E 2017E UNIT COSTS: