indonesia is the center of marine biodiversity
DESCRIPTION
Comparison of dispersal in two sea stars, Linckia laevigata and Protoreaster nodosus , across a known geographic barrier. Martha Muñoz, Bola Akinronbi, and Paul Barber (BUMP). Indonesia is the center of marine biodiversity. Fish Corals Snails. Coastal margins during glacial maxima. - PowerPoint PPT PresentationTRANSCRIPT
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Comparison of dispersal in two sea stars, Linckia
laevigata and Protoreaster nodosus, across a known
geographic barrier.
Martha Muñoz, Bola Akinronbi, and Paul Barber (BUMP)
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Indonesia is the center of marine biodiversityIndonesia is the center of marine biodiversity
Fish
Corals
Snails
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Coastal marginsduring glacial maxima
Pleistocene Sea Level Fluctuations
After Voris 2002 400km
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Lavery et al. 1996
McMillan & Palumbi 1996Williams & Benzie, Benzie & Williams 1997
Duke et al. 1999
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Linkia laevigata
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Williams et al. (2000).
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GOALS
To examine the genetic structure of Linckia laevigata
across a broad geographic scale and refine the location of a
biogeographic break.
To determine the degree of similarity genetic structure
between Linckia laevigata and Protoreaster nodosus, which have
similar larval pelagic dispersals.
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Protoreaster nodosus
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F-statisticsF-statistics
Fst: measure of genetic divergence by examining allelic
content.
Ranges from 0-1.
“0” means there is no genetic difference between sub- and
total population.
“1” means the sub- and total population are not related at all.
It is used to infer gene flow.
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MethodsI. Sampling
JavaSulawesi
Halmahera
Papua
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I. Sampling in the field- Collected 377 Linckia and 115
Protoreaster from 23 localities.
II. DNA extractions were performed using a 10% Chelex solution and
samples were incubated overnight.
III. Amplifications of mitochondrial CO-1 were performed and
fragments varying from 658 to 890 base pairs were isolated.
MethodsMethods
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IV. Isolated CO-1 fragments were sequenced on an ABI 377 using
ddNTP terminator chemistry
V.Resulting fragments were proofread using Sequencher software and
fragment alignments were visually made.
VI. Minimum-spanning trees and F-statistics were determined using
Arlequin software.
MethodsMethods
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Linckia laevigata Minimum Spanning
Tree
Gray Clade
White Clade
Black Clade
Clades were separated by 8 mutational steps.
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ResultsResults
Linckia laevigata
Relative Clade
Distribution
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White
Clade
Gray Clade
Black Clade
Protoreaster Haplotype Network
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Protoreaster
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Linckia
Protoreaster
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WestWest
EastEast
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---------------------------------------------------------------------- Source of Sum of Variance Percentage variation d.f. squares components of variation----------------------------------------------------------------------Between East and West 1 35.001 0.13108 Va 2.93
Within East orWest Groups 21 181.828 0.26882 Vb 6.02
Within populations 373 1517.555 4.06851 Vc 91.05---------------------------------------------------------------------- Total 395 1734.384 4.46841---------------------------------------------------------------------- Fixation Indices FSC : 0.06198, p=0.0000 FST : 0.08949, p=0.0000 FCT : 0.02933, p=0.0127----------------------------------------------------------------------
Fst and Genetic Variance Between Indian and Pacific Ocean Populations of Linckia
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Fst and Genetic Variance Between Indian and Pacific Ocean
Populations of Protoreaster---------------------------------------------------------------------- Source of Sum of Variance Percentage variation d.f. squares components of variation----------------------------------------------------------------------Between EastAnd West 1 1.787 0.01279 Va 1.58
Among populationswithin Eastor West 9 10.259 0.03303 Vb 4.08
Within populations 121 92.370 0.76339 Vc 94.34---------------------------------------------------------------------- Total 131 104.417 0.80921---------------------------------------------------------------------- Fixation Indices FSC : 0.04147, p=0.0088 FST : 0.05662, p=0.0098 FCT : 0.01581, p=0.1642----------------------------------------------------------------------
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y = 0.4229x + 0.0096
R2 = 0.6225
0
0.02
0.04
0.06
0.08
0.1
0.12
0.14
0 0.05 0.1 0.15 0.2 0.25 0.3
Linckia
Protoreaster
Fst of Linkia vs. ProtoreasterFst of Linkia vs. Protoreaster
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ConclusionsConclusions
High diversity in haplotypes with some High diversity in haplotypes with some
regional differentiation of clades.regional differentiation of clades.
LinckiaLinckia
ProtoreasterProtoreaster
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ProtoreasterProtoreaster LinckiaLinckia
ConclusionsConclusions
Three major clades among Three major clades among Linckia Linckia andand
Protoreaster. Protoreaster. Star phylogenies suggest recentStar phylogenies suggest recent
range expansions.range expansions.
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ConclusionsConclusions
Variation across a geographic gradient is positively orrelated between Variation across a geographic gradient is positively orrelated between
Protoreaster Protoreaster and and Linckia. Linckia. These similar taxa disperse and exchange These similar taxa disperse and exchange
genes in similar patterns.genes in similar patterns.y = 0.4229x + 0.0096
R2 = 0.6225
0
0.02
0.04
0.06
0.08
0.1
0.12
0.14
0 0.05 0.1 0.15 0.2 0.25 0.3
Linckia
Protoreaster
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Broader ImplicationsBroader Implications
Similar taxa, such as Similar taxa, such as Linckia Linckia and and ProtoreasterProtoreaster
can display similar patterns of dispersal.can display similar patterns of dispersal.
Marine protected areas require ranges largeMarine protected areas require ranges large
enough to ensure adequate gene flow.enough to ensure adequate gene flow.
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Acknowledgments
Thank you to Paul Barber, Bolanle Akinronbi, Elizabeth Jones,
and Eric Crandall for support both in the laboratory and in the
field.
NSF for funding