inbiomedvision poster enabling system biology

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INBIOMEDvision INBIOMEDvision: PROMOTING AND MONITORING BIOMEDICAL PROMOTING AND MONITORING BIOMEDICAL INFORMATICS IN EUROPE INFORMATICS IN EUROPE 2 Scientific Events (M7 M24): Nour Shublaq 1 and Peter Coveney 1 1 Centre for Computational Science, Department of Chemistry, University College London, UK Centre for Computational Science, Department of Chemistry, University College London, UK [email protected] [email protected] Overview Objectives 2 Scientific Events (M7-M24): large-scale, open to researchers in the EU and beyond foster integrative collaborations 1 workshop at VPH 2012 (Virtual Physiological Human Conference) • To promote the field of BMI by permanent monitoring of the scientific state-of-the-art and existing activities in the area, prospective analysis of the emerging challenges and opportunities, and dissemination of the knowledge to a wide range of experts. • Is a $1M European Coordination and Support Action project, funded by FP7-ICT. • Start Data = 1 February 2011 • End Date = 31 January 2013 Complementary expertise of seven partners: University Training Activities (M3-M24): To ensure the adoption of new techniques by researchers, clinicians and industry (developers and reserachers from VPH) T o develop the field of BMI by building bridges for the information transfer and integration between the basic research and the healthcare communities, To forge synergistic relationships between the two communities, and Complementary expertise of seven partners: University College London (Uk), University Pompeu Fabra (Spain), Fundacio IMIM (Spain), Danish Technical University (Denmark), Erasmus University Medical Centre (The Netherlands), Madrid Polytechnique University (Spain), and Instiute de Salud Carlos III (Spain). 30 + experts committed to participate Research Directory (M1-M24): Ongoing Open to all, and over the web, subject to agreement from the individuals concerned facilitate communication and collaboration • To help pave the way for the translation of Bioinformatics research to the clinical practice, as well as the re-use of clinical information by the research community. 30 + experts committed to participate • Biomedical Informatics (BMI) deals with the integrative management and synergic exploitation of wide-ranging and inter-related information generated in healthcare Biomedical Informatics: The Challenge ed tools featured to search for researchers, or conduct discussions among special interest groups and inter-related information generated in healthcare settings, biomedical research institutions and health- related industries. rative edical matics Fig 3.Two-side Interaction • There are heavy barriers to achieving this; mainly a mutual ignorance between the bioinformatics community (“omics” research and systems biology) and medical INBIOMEDvision Partners Fig 1. Integr Biome Inform • 3 Think tank activities (M3-M21): June/July 2011 invited individuals considered to be leaders/experts in their respective fields from a wide range of relevant Description of Specific Activities Fig 4. Work Packages informatics groups (focused on promoting healthcare and clinical research). their respective fields, from a wide range of relevant academic disciplines, clinical practice and industry. - Translational Bioinformatics (left to right arrow) - Research Re-use of Clinical Information (right to left) - Genotype/Phenotype resources - Genotype/Phenotype resources Outcome: a strategy report(s) on the current state of play in BMI and related fields, with ideas about possible areas to be promoted by means of topics in EU funded research. Fig 2. Barriers between Bioinformatics and Medical Informatics

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Poster of INBIOMEDvision presented in Enabling Systems Biology Conference & Bioinformatics Workshop.

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INBIOMEDvisionINBIOMEDvision:: PROMOTING AND MONITORING BIOMEDICAL PROMOTING AND MONITORING BIOMEDICAL INFORMATICS IN EUROPEINFORMATICS IN EUROPE

• 2 Scientific Events (M7 M24):

Nour Shublaq1 and Peter Coveney1

11Centre for Computational Science, Department of Chemistry, University College London, UKCentre for Computational Science, Department of Chemistry, University College London, [email protected]@ucl.ac.uk

Overview Objectives • 2 Scientific Events (M7-M24):

large-scale, open to researchers in the EU and beyond

foster integrative collaborations

1 workshop at VPH 2012 (Virtual Physiological Human Conference)

• To promote the field of BMI by permanent monitoring of the scientific state-of-the-art and existing activities in the area, prospective analysis of the emerging challenges and opportunities, and dissemination of the knowledge to a wide range of experts.

• Is a $1M European Coordination and Support Action project, funded by FP7-ICT.

• Start Data = 1 February 2011

• End Date = 31 January 2013

• Complementary expertise of seven partners: University

• Training Activities (M3-M24):

To ensure the adoption of new techniques by researchers, clinicians and industry (developers and reserachers from VPH)

• To develop the field of BMI by building bridges for the information transfer and integration between the basic research and the healthcare communities,

• To forge synergistic relationships between the two communities, and

Complementary expertise of seven partners: University College London (Uk), University Pompeu Fabra (Spain), Fundacio IMIM (Spain), Danish Technical University (Denmark), Erasmus University Medical Centre (The Netherlands), Madrid Polytechnique University (Spain), and Instiute de Salud Carlos III (Spain).

• 30 + experts committed to participate

• Research Directory (M1-M24): Ongoing

Open to all, and over the web, subject to agreement from the individuals concerned

facilitate communication and collaboration

• To help pave the way for the translation of Bioinformatics research to the clinical practice, as well as the re-use of clinical information by the research community.

• 30 + experts committed to participate

• Biomedical Informatics (BMI) deals with the integrative management and synergic exploitation of wide-ranging and inter-related information generated in healthcare

Biomedical Informatics: The Challenge

ed

tools featured to search for researchers, or conduct discussions among special interest groups

and inter-related information generated in healthcare settings, biomedical research institutions and health-related industries.

rative

ed

ical

m

atic

s

Fig 3

.Tw

o-s

ide

Inte

ract

ion

• There are heavy barriers to achieving this; mainly a mutual ignorance between the bioinformatics community (“omics” research and systems biology) and medical INBIOMEDvision Partners

Fig 1

.In

tegr

Bio

me

Info

rm

• 3 Think tank activities (M3-M21): June/July 2011

invited individuals considered to be leaders/experts in their respective fields from a wide range of relevant

Description of Specific ActivitiesFig 4. Work Packages

( y gy)informatics groups (focused on promoting healthcare and clinical research).

their respective fields, from a wide range of relevant academic disciplines, clinical practice and industry.

- Translational Bioinformatics (left to right arrow)

- Research Re-use of Clinical Information (right to left)

- Genotype/Phenotype resources - Genotype/Phenotype resources

Outcome: a strategy report(s) on the current state of play in BMI and related fields, with ideas about possible areas to be promoted by means of topics in EU funded research.

Fig 2. Barriers between Bioinformatics and

Medical Informatics