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IFAC BIOMED Past, Present and Future Ewart Carson

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Page 1: IFAC BIOMEDbms.iit.bme.hu/files/kn0830c.pdfMy Beginnings CD Barr, ER Carson, L Finkelstein, EA Jones.A study of the dynamics of plasma protein metabolism, in: Proc 4th IFAC Congress,

IFAC BIOMED

Past, Present and Future

Ewart Carson

Page 2: IFAC BIOMEDbms.iit.bme.hu/files/kn0830c.pdfMy Beginnings CD Barr, ER Carson, L Finkelstein, EA Jones.A study of the dynamics of plasma protein metabolism, in: Proc 4th IFAC Congress,

The Beginnings of IFAC

1st IFAC Congress – 1960 (Moscow)

1st IFAC BIOMED Conference – 1973

(Rochester, NY)

Promoting the scientific and technological activities of modelling and control in biomedicine (including biology)

Page 3: IFAC BIOMEDbms.iit.bme.hu/files/kn0830c.pdfMy Beginnings CD Barr, ER Carson, L Finkelstein, EA Jones.A study of the dynamics of plasma protein metabolism, in: Proc 4th IFAC Congress,

Before the Beginning

“On Growth and Form” (1915) – D'Arcy Thompson

Page 4: IFAC BIOMEDbms.iit.bme.hu/files/kn0830c.pdfMy Beginnings CD Barr, ER Carson, L Finkelstein, EA Jones.A study of the dynamics of plasma protein metabolism, in: Proc 4th IFAC Congress,

Before the Beginning

“On Growth and Form” (1915) – D'Arcy Thompson

Simple examples of modelling of glucose metabolism, respiratory dynamics and population dynamics

Page 5: IFAC BIOMEDbms.iit.bme.hu/files/kn0830c.pdfMy Beginnings CD Barr, ER Carson, L Finkelstein, EA Jones.A study of the dynamics of plasma protein metabolism, in: Proc 4th IFAC Congress,

My Beginnings

CD Barr, ER Carson, L Finkelstein, EA Jones.

A study of the dynamics of plasma protein metabolism,

in: Proc 4th IFAC Congress, Warsaw. IFAC 1969; section 70: 87-100

ER Carson, DG Cramp, L Finkelstein, AS Tavill.

Problems in dynamic systems analysis of metabolic systems,

in: Regulation and Control in Physiological Systems, AS Iberall, AC Guyton (eds). Pittsburgh: Instrument Society of America 1973; 491-493

Page 6: IFAC BIOMEDbms.iit.bme.hu/files/kn0830c.pdfMy Beginnings CD Barr, ER Carson, L Finkelstein, EA Jones.A study of the dynamics of plasma protein metabolism, in: Proc 4th IFAC Congress,

IFAC BIOMED Old and New

Old series

Rochester NY 1973

Leipzig 1977

IFAC World Congresses in Helsinki, Kyoto, Budapest and Munich

New series

Venice 1988

…..............

Page 7: IFAC BIOMEDbms.iit.bme.hu/files/kn0830c.pdfMy Beginnings CD Barr, ER Carson, L Finkelstein, EA Jones.A study of the dynamics of plasma protein metabolism, in: Proc 4th IFAC Congress,

The Modelling Process

Modelling Purpose

Model Formulation

Conceptualisation

Realisation

Solution

Model Identification

Laws

Theories

Data

Model

Validation

Validated Model

Problem Perception

Page 8: IFAC BIOMEDbms.iit.bme.hu/files/kn0830c.pdfMy Beginnings CD Barr, ER Carson, L Finkelstein, EA Jones.A study of the dynamics of plasma protein metabolism, in: Proc 4th IFAC Congress,

Modelling the Data

Physiological system

Model structure Input-output representation

Parameter estimation

Model

Modelling methodology

Data

Modelling

purpose

Page 9: IFAC BIOMEDbms.iit.bme.hu/files/kn0830c.pdfMy Beginnings CD Barr, ER Carson, L Finkelstein, EA Jones.A study of the dynamics of plasma protein metabolism, in: Proc 4th IFAC Congress,

Modelling the System

Physiological system

Model structure Input-output representation

Parameter estimation

Model

Modelling methodology

Data

Modelling

purpose

A priori

knowledge

Assumptions

Page 10: IFAC BIOMEDbms.iit.bme.hu/files/kn0830c.pdfMy Beginnings CD Barr, ER Carson, L Finkelstein, EA Jones.A study of the dynamics of plasma protein metabolism, in: Proc 4th IFAC Congress,

Qualitative and Quantitative Models

Purpose Diagrammatic Mathematical Statistical Logical

Qual Quant Qual Quant Qual Quant Qual Quant

Description

Prediction

Explanation

Rarely if ever successful

Sometimes successful

Almost always successful

Page 11: IFAC BIOMEDbms.iit.bme.hu/files/kn0830c.pdfMy Beginnings CD Barr, ER Carson, L Finkelstein, EA Jones.A study of the dynamics of plasma protein metabolism, in: Proc 4th IFAC Congress,

Model Validation

Validation during model formulation

Page 12: IFAC BIOMEDbms.iit.bme.hu/files/kn0830c.pdfMy Beginnings CD Barr, ER Carson, L Finkelstein, EA Jones.A study of the dynamics of plasma protein metabolism, in: Proc 4th IFAC Congress,

Model Validation

Validation during model formulation

Validation of the completed model

(Empirical, Theoretical, Pragmatic, Heuristic)

Page 13: IFAC BIOMEDbms.iit.bme.hu/files/kn0830c.pdfMy Beginnings CD Barr, ER Carson, L Finkelstein, EA Jones.A study of the dynamics of plasma protein metabolism, in: Proc 4th IFAC Congress,

Validation Strategies

Validation of a single model

overall patterns of response

features of response

parameter precision

residuals of the mismatch between model and data

parameter plausibility

Page 14: IFAC BIOMEDbms.iit.bme.hu/files/kn0830c.pdfMy Beginnings CD Barr, ER Carson, L Finkelstein, EA Jones.A study of the dynamics of plasma protein metabolism, in: Proc 4th IFAC Congress,

Validation Strategies

Validation of a single model

overall patterns of response

features of response

parameter precision

residuals of the mismatch between model and data

parameter plausibility

Validation of competing models

goodness of fit

features of response

model plausibility

Page 15: IFAC BIOMEDbms.iit.bme.hu/files/kn0830c.pdfMy Beginnings CD Barr, ER Carson, L Finkelstein, EA Jones.A study of the dynamics of plasma protein metabolism, in: Proc 4th IFAC Congress,

Modelling Applications

Large scale models

Minimal models

Page 16: IFAC BIOMEDbms.iit.bme.hu/files/kn0830c.pdfMy Beginnings CD Barr, ER Carson, L Finkelstein, EA Jones.A study of the dynamics of plasma protein metabolism, in: Proc 4th IFAC Congress,

IFAC BIOMED – The New Series

Venice 1988

Galveston 1994

Warwick 1997

Greifswald 2000

Melbourne 2003

Reims 2006

Aalborg 2009

Budapest 2012

Page 17: IFAC BIOMEDbms.iit.bme.hu/files/kn0830c.pdfMy Beginnings CD Barr, ER Carson, L Finkelstein, EA Jones.A study of the dynamics of plasma protein metabolism, in: Proc 4th IFAC Congress,

The Last Two Decades

Clinical decision support (mathematics and artificial intelligence)

Model-based image analysis

Systems biology (“omics” modelling)

Cellular modelling

Page 18: IFAC BIOMEDbms.iit.bme.hu/files/kn0830c.pdfMy Beginnings CD Barr, ER Carson, L Finkelstein, EA Jones.A study of the dynamics of plasma protein metabolism, in: Proc 4th IFAC Congress,

The Last Two Decades

Clinical decision support (mathematics and artificial intelligence)

Model-based image analysis

Systems biology (“omics” modelling)

Cellular modelling

e-Health

Telemedicine

m-Health

Page 19: IFAC BIOMEDbms.iit.bme.hu/files/kn0830c.pdfMy Beginnings CD Barr, ER Carson, L Finkelstein, EA Jones.A study of the dynamics of plasma protein metabolism, in: Proc 4th IFAC Congress,
Page 20: IFAC BIOMEDbms.iit.bme.hu/files/kn0830c.pdfMy Beginnings CD Barr, ER Carson, L Finkelstein, EA Jones.A study of the dynamics of plasma protein metabolism, in: Proc 4th IFAC Congress,

Partnerships

Organisations

IEEE EMBS

IMEKO

Journals

Computer Methods and Programs in Biomedicine

Biomedical Signal Processing and Control

Journal of Clinical Monitoring and Computing

Page 21: IFAC BIOMEDbms.iit.bme.hu/files/kn0830c.pdfMy Beginnings CD Barr, ER Carson, L Finkelstein, EA Jones.A study of the dynamics of plasma protein metabolism, in: Proc 4th IFAC Congress,

Developments for the Future

Models for personalised medicine

Page 22: IFAC BIOMEDbms.iit.bme.hu/files/kn0830c.pdfMy Beginnings CD Barr, ER Carson, L Finkelstein, EA Jones.A study of the dynamics of plasma protein metabolism, in: Proc 4th IFAC Congress,

Developments for the Future

Models for personalised medicine

Model integration – multi timescale

- multi-level (cell, organ, organism, community)

Page 23: IFAC BIOMEDbms.iit.bme.hu/files/kn0830c.pdfMy Beginnings CD Barr, ER Carson, L Finkelstein, EA Jones.A study of the dynamics of plasma protein metabolism, in: Proc 4th IFAC Congress,

Developments for the Future

Models for personalised medicine

Model integration – multi timescale

- multi-level (cell, organ, organism, community)

Diagnostic modality integration (e.g. pathology and imaging in the context of breast cancer)

Page 24: IFAC BIOMEDbms.iit.bme.hu/files/kn0830c.pdfMy Beginnings CD Barr, ER Carson, L Finkelstein, EA Jones.A study of the dynamics of plasma protein metabolism, in: Proc 4th IFAC Congress,

Developments for the Future

Models for personalised medicine

Model integration – multi timescale

- multi-level (cell, organ, organism, community)

Diagnostic modality integration (e.g. pathology and imaging in the context of breast cancer)

Mobile platforms for model-based personalised medicine

Page 25: IFAC BIOMEDbms.iit.bme.hu/files/kn0830c.pdfMy Beginnings CD Barr, ER Carson, L Finkelstein, EA Jones.A study of the dynamics of plasma protein metabolism, in: Proc 4th IFAC Congress,

Developments for the Future

Models for personalised medicine

Model integration – multi timescale

- multi-level (cell, organ, organism, community)

Diagnostic modality integration (e.g. pathology and imaging in the context of breast cancer)

Mobile platforms for model-based personalised medicine

Page 26: IFAC BIOMEDbms.iit.bme.hu/files/kn0830c.pdfMy Beginnings CD Barr, ER Carson, L Finkelstein, EA Jones.A study of the dynamics of plasma protein metabolism, in: Proc 4th IFAC Congress,

Decision Support/Making

Telemedicine

Advisory systems

Closed loop systems

Page 27: IFAC BIOMEDbms.iit.bme.hu/files/kn0830c.pdfMy Beginnings CD Barr, ER Carson, L Finkelstein, EA Jones.A study of the dynamics of plasma protein metabolism, in: Proc 4th IFAC Congress,

Technology

Mobile

Wearable

Embedded

Page 28: IFAC BIOMEDbms.iit.bme.hu/files/kn0830c.pdfMy Beginnings CD Barr, ER Carson, L Finkelstein, EA Jones.A study of the dynamics of plasma protein metabolism, in: Proc 4th IFAC Congress,

The Hospital of the Future

Medical workforce modelling

Data and information modelling

Patient modelling (e.g. controlling the flow of patients in a surgical progressive care system)

Page 29: IFAC BIOMEDbms.iit.bme.hu/files/kn0830c.pdfMy Beginnings CD Barr, ER Carson, L Finkelstein, EA Jones.A study of the dynamics of plasma protein metabolism, in: Proc 4th IFAC Congress,

Future IFAC BIOMED

BIOMED 2015 ?

BIOMED 2018 ?