hydrocarbon chemistry lecture notes
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1.1 Atomic Structure Atom:
Nucleusneutrons (neutral) + protons (+ve), the mass of theatom.
Electron- Negatively charged, negligible mass
Atom is neutral, No. of protons = no. of electrons
Diameter of an atom is about 2 10-10m (200
picometers(pm)) [the unit angstrom() is 10-10m =
100 pm]
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Atomic number(Z)- number of protons in theatom's nucleus
Mass number(A ) - number of protons plusneutrons
Atoms of a given element have the same atomicnumber: 1 for hydrogen, H 6 for carbon, C
Isotopes - atoms of the same element but
different numbers of neutrons
different massnumbers Atom ic mass(atomic weight)- weighted
average mass in atomic mass units (amu) of an
elements naturally occurring isotopes
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1.2 Atomic Structure: Orbitals
4 kinds of orbitals: s, p, d, and f
Orbitals are organised into different layerselectron shells
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Orbitals and Shells Orbitals are grouped in shells of increasing size and energy Different shells contain different numbers and kinds of orbitals Each orbital can be occupied by two electrons First shell contains one sorbital, denoted 1s, holds only two
electrons Second shell contains one sorbital (2s) and threeporbitals (2p),
eight electrons
Third shell contains an sorbital (3s), threeporbitals (3p), and five dorbitals (3d), 18 electrons
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p-Orbitals
3p orbitals within a given shell are oriented inperpendicular directions:px,py, andpz Lobes of aporbital are separated by region of zero
electron density, a node
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1.3 Atomic Structure: Electron
Configurations
Ground-state electron configuration (lowestenergy arrangement)listing of orbitalsoccupied by the electrons.
Rules 1:Lowest-energy orbitalsfirst: 1s2s2p3s3p4s3d(Aufbau (build-up)principle)
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Rules 2:
Electrons act as they are
spinning around axis,2 spin orientations: or
Only 2 electrons occupy
an orbitalPauli exclusion
principle
Rules 3:
If 2 or more empty orbitals
of equal energy areavailable, 1 electronoccupies with parallelspins until orbitals arehalf-full
Hundsrule
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1.4 Development of Chemical Bonding
Theory
Atoms form bonds because the compound thatresults is more stable than the separate atoms
Ionic bonds in salts form as a result of electrontransfers (example: Na+Cl-)
Organic compounds have covalent bonds fromsharing electrons (G. N. Lewis, 1916)
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Kekul and Couper independently observed thatcarbon always has four bonds
van't Hoff and Le Bel proposed that the four bonds ofcarbon have specific spatial directions Atoms surround carbon as corners of a tetrahedron
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Lewis structures(electron dot) show valence electrons of
an atom as dots Hydrogen has one dot, representing its 1selectron Carbon has four dots (2s22p2)
Kekule structures(line-bond structures) have a line drawnbetween two atoms indicating a 2 electron covalent bond.
Method of indicating covalent bonds
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Note that:
Stable molecule = noble gas configuration
completed shell, octet (eight dots) for main-group atoms, twofor hydrogen
Depends on how many additional valence electrons to
reach noble-gas configuration. Carbon has four valence electrons (2s22p2), forming four
bonds (CH4). Nitrogen has five valence electrons (2s22p3) but forms only
three bonds (NH3). Oxygen has six valence electrons (2s22p4) but forms two
bonds (H2O)
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Nonbonding electron
Valence electrons not used in bonding are callednonbonding electrons, or lone-pair electrons Nitrogen atom in ammonia (NH3)
Shares six valence electrons in three covalent bonds and
remaining two valence electrons are nonbonding lone pair
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Drawing Structures
Drawing every bond in organic molecule can
become tedious. Several shorthand methods have been developed to
write structures.
1)Condensed structures dont have C-H or C-C single
bonds shown. They are understood.2)Skeletal structures
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Skeletal structure
3 General Rules:1) Carbon atoms arent usually shown. Instead a
carbon atom is assumed to be at eachintersection of two lines (bonds) and at the end
of each line.
2) Hydrogen atoms bonded to carbon arent
shown.
3) Atoms other than carbon and hydrogen areshown.
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1.5 The Nature of Chemical Bonds:
Valence Bond Theory
2 models to describe covalent bonding: Valence bond theory Molecular orbital theory
Covalent bond forms when two atoms approach eachother closely so that a singly occupied orbital on one
atom overlapsa singly occupied orbital on the other atom
H-H bond is cylindrically symmetrical, bond formed by thehead-on overlap of 2 atomic orbitals are called sigma ()bonds
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Bond Energy
Reaction 2 H
H2releases 436 kJ/mol Product has 436 kJ/mol less energy than two
atoms: HH has bond strengthof 436 kJ/mol.(1 kJ = 0.2390 kcal; 1 kcal = 4.184 kJ)
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Bond Length
Distance betweennuclei that leadsto maximumstability
If too close, theyrepel becauseboth are positivelycharged
If too far apart,bonding is weak
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1.6 sp3 Orbitals Carbon has 4 valence electrons (2s22p2) In CH4, all CH bonds are identical (tetrahedral) sp3hybrid orbitals:sorbital and threeporbitals
combine to form four equivalent, unsymmetrical,tetrahedral orbitals (sppp = sp3), Pauling (1931)
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Structure of methane
sp3orbitals on C overlap with 1sorbitals on 4 Hatoms to form four identical C-H bonds
Each CH bond has a strength of 436 (438)kJ/mol and length of 109 pm
Bond anglebonds specific geometry,methane: each HCH is 109.5, the tetrahedralangle.
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Structure of ethane
Two Cs bond to each other by overlap of an sp3orbital from each
Three sp3orbitals on each C overlap with H 1sorbitals to form six CH bonds
CH bond strength in ethane 423 kJ/mol CC bond is 154 pm long and strength is 376 kJ/mol
All bond angles of ethane are tetrahedral value of109.5
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1.7 sp2 Orbitals sp2hybrid orbitals: 2sorbital combines with two2p
orbitals, giving 3 orbitals (spp = sp2). This results in adouble bond.sp2orbitals are in a plane with120 angles Remainingporbital is perpendicular to the plane
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Bonds from sp2hybrid orbitals
Two sp2
-hybridized orbitals overlap to form a
bondporbitals overlap side-to-sideto format a pi ()
bond
sp2sp
2
bond and 2p2pbond result insharing four electrons and formation of C-Cdouble bond
Electrons in the bond are centered between
nuclei Electrons in the bond occupy regions are on
either side of a line between nuclei
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Structure of ethylene
H atoms form bonds with four sp2orbitals HCH and HCC bond angles of about 120 CC double bond in ethylene shorter and stronger
than single bond in ethane Ethylene C=C bond length 134 pm (CC 154 pm)
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1.8 spOrbitals C-C a triplebond sharing six electrons Carbon 2sorbital hybridizes with a singlep
orbital giving two sphybrids twoporbitals remain unchanged
sporbitals are linear, 180 apart onx-axis Twoporbitals are perpendicular on the y-axis
and the z-axis
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Orbitals of acetylene
Two sphybrid orbitals from each C form spsp
bondpzorbitals from each C form apzpzbond by
sideways overlap andpyorbitals overlap similarly
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Bonding in acetylene
Sharing of six electrons forms C C
Two sporbitals form bonds with hydrogens
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Comparison of C-C and C-Hbonds
1 9 Hybridization of Nitrogen and
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1.9 Hybridization of Nitrogen and
Oxygen Elements other than C can have hybridized orbitals HNH bond angle in ammonia (NH3) 107.3 C-N-H bond angle is 110.3 Ns orbitals (sppp) hybridize to form four sp3orbitals One sp3orbital is occupied by two nonbonding
electrons, and three sp3orbitals have one electroneach, forming bonds to H and CH3.
1 10 The nature of chemical
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1.10 The nature of chemical
bonds: Molecular Orbital Theory
A molecularorbital(MO): where electrons are mostlikely to be found (specific energy and generalshape) in a molecule
Additive combination (bonding) MO is lower inenergy
Subtractive combination (antibonding) MO is higherenergy
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Molecular Orbitals in Ethylene
The
bonding MO is from combiningporbitallobes with the same algebraic sign
The antibonding MO is from combining lobeswith opposite signs
Only bonding MO is occupied
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Summary
Organic chemistrychemistry of carbon compounds Atom: positively charged nucleus surrounded by
negatively charged electrons Electronic structure of an atom described by wave
equation Electrons occupy orbitalsaround the nucleus. Different orbitals have different energy levels and different
shapes sorbitals are spherical, porbitals are dumbbell-shaped
Covalent bonds- electron pair is shared between atoms
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Valence bond theory - electron sharing occurs byoverlap of two atomic orbitals
Molecular orbital (MO) theory, - bonds result fromcombination of atomic orbitals to give molecular orbitals,which belong to the entire molecule
Sigma () bonds- Circular cross-section and are formedby head-on interaction
Pi () bondsdumbbell shape from sidewaysinteraction ofporbitals
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Carbon uses hybrid orbitals to form bonds in organic
molecules. In single bonds with tetrahedral geometry, carbon has foursp3hybrid orbitals
In double bonds with planar geometry, carbon uses threeequivalent sp2hybrid orbitalsand one unhybridizedp
orbital Carbon uses two equivalent sphybrid orbitalsto form atriple bond with linear geometry, with two unhybridizedporbitals
Atoms such as nitrogen and oxygen hybridize to formstrong, oriented bonds The nitrogen atom in ammonia and the oxygen atom in
water are sp3-hybridized