how can repositories support the text-mining of their content and why?

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How can repositories support the text-mining of their content and why? @openminted_eu Dr. Petr Knoth and Dr. Nancy Pontika Knowledge Media institute, The Open University United Kingdom Twitter: @oacore

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Page 1: How can repositories support the text-mining of their content and why?

How can repositories support the text-mining of their

content and why?

@openminted_eu

Dr. Petr Knoth and Dr. Nancy PontikaKnowledge Media institute, The Open UniversityUnited KingdomTwitter: @oacore

Page 2: How can repositories support the text-mining of their content and why?

Why should repositories support TDM?

@openminted_eu

Page 3: How can repositories support the text-mining of their content and why?

@openminted_eu

In the UK

Page 4: How can repositories support the text-mining of their content and why?

Repositories and TDM

@openminted_eu

Institutional Repositories

Subject Repositories

Publishers/ OA journals

Other sources:

Research Networking

ServicesPrimary Research

Data...

Text Mining Services

Page 5: How can repositories support the text-mining of their content and why?
Page 6: How can repositories support the text-mining of their content and why?

TDM & Repositories Managers

@openminted_eu

• Established and maintain a close collaboration with researchers

• Extensive experience in advocacy, i.e. open ac-cess

• Knowledgeable about the repository’s collection• Participate in the Academic Institution’s Research

Committees • Knowledgeable of your repository’s collection• Familiarity with Copyright issues and Creative

Commons Licenses

Page 7: How can repositories support the text-mining of their content and why?

How can repositories support TDM?TDM is all about processing text and data

at scale. The role of repositories is to facilitate the aggregation of research

papers at a full-text level (and beyond) effectively enabling TDM services to operate seamlessly on all available

research content.

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Page 8: How can repositories support the text-mining of their content and why?

What is the problem?

@openminted_eu

• A small study (Knoth, 2013)• 83 repositories - mainly Eprints with PDF

research outputs• 1,461,016 metadata records

  metadata linked to content

content downloadabl

e

content machine readable

Mean 54.1% 34.4% 27.6%Median 39.5% 16.7% 13.0%Standard deviation

39.2% 34.2% 31.0%

Page 9: How can repositories support the text-mining of their content and why?

How is content aggregated today?

@openminted_eu

• DC over OAI-PMH: vast majority of repositories, never intended to support content harvesting. The main problem: linking metadata with content.

“The nature of a resource identifier is outside the scope of the OAI-PMH. To facilitate access to the resource associated with harvested metadata, repositories should use an element in metadata records to establish a linkage between the record (and the identifier of its item) and the identifier (URL, URN, DOI, etc.) of the associated resource. The mandatory Dublin Core format provides the identifier element that should be used for this purpose.”

Page 10: How can repositories support the text-mining of their content and why?

How is content aggregated today?

@openminted_eu

• RIOXX: Just one identifier, recommends the identifier points to the actual resource being described.

• OpenAIRE Guidelines: identifier links to either the resource or a jump-off page. Does allow multiple identifiers.

• ResourceSync

• CrossRef: comercial publishers/journals

Page 11: How can repositories support the text-mining of their content and why?

The content referencing problem

@openminted_eu

Page 12: How can repositories support the text-mining of their content and why?

Principle 1: content referencingRepositories should always establish a link from the metadata record to the item the metadata record describes using a dereferencable identifier pointing to the version held locally in the repository. The dereferencable identifier should be provided in the appropriate metadata element in the used metadata format (i.e. dc:identifier in the case of Dublin Core). If multiple identifiers are used, it is recommended listing the local dereferencable identifier first.

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Page 13: How can repositories support the text-mining of their content and why?

The accessibility of repositories to harvesting systems

@openminted_eu

Page 14: How can repositories support the text-mining of their content and why?

Principle 2: Content accessibility to machinesRepositories must provide universal access to machines with the same level of access as humans have. It is the role of repositories to allow aggregators to harvest the entire content of the repository in a reasonable time to enable acquiring and maintain up-to-date information about the repository content.

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Page 15: How can repositories support the text-mining of their content and why?

What can repositories do?

@openminted_eu

• Ensure correct referencing of content from metadata:• Dereferencable link which resolves to content• Locally held (content under its control)• Using a standard repository platform can help

• Check robots.txt• Register your repository• Advocate for good pdf (media) quality of deposited

content• Use monitoring tools

• CORE Repository Dashboard• OpenAIRE Repository Manager Dashboard

• Machine readable licensing

Page 16: How can repositories support the text-mining of their content and why?

beyond Open Access

MAKING SENSE OF LARGE VOLUMES OF SCIENTIFIC CONTENT

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Page 17: How can repositories support the text-mining of their content and why?

Interested in how to TDM research papers?

@openminted_eu

We have 3 moretalks tomorrow!

Developer track 1, 11:00Mining Open Access publications with CORE

Page 18: How can repositories support the text-mining of their content and why?

Interested in how to TDM research papers?

@openminted_eu

We have 3 moretalks tomorrow!

Developer track 1, 11:20Oxford vs Cambridge Contest: Collecting Open Research Evaluation Metrics for University Ranking

Page 19: How can repositories support the text-mining of their content and why?

Interested in how to TDM research papers?

@openminted_eu

We have 3 moretalks tomorrow!Papers 4, 4:00Exploring Semantometrics: full text-based research evaluation for open repositories

Page 20: How can repositories support the text-mining of their content and why?

Thank youDr. Pert Knoth,, Research [email protected]. Nancy Pontika, Open Access Aggregation [email protected]

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