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Page 1: Heterocyclic - faculty.psau.edu.sa · 4-To understand methods of reaction ... It resist electrophilic substitution only in N-atom or at meta-position It is highly susceptible to neucleophilic
Page 5: Heterocyclic - faculty.psau.edu.sa · 4-To understand methods of reaction ... It resist electrophilic substitution only in N-atom or at meta-position It is highly susceptible to neucleophilic

Six Membered

Aromatic

Heterocycles

Page 6: Heterocyclic - faculty.psau.edu.sa · 4-To understand methods of reaction ... It resist electrophilic substitution only in N-atom or at meta-position It is highly susceptible to neucleophilic

Structure and Properties

The aromatic sextet is complete

without participating of the lone pair

of nitrogen

Molecular orbital

The unshared electrons is in sp2 orbital

and in the same plane of the ring but

other

P orbital (including N) is ┴ and has one

electron, where it overlapped making

the aromatic system

Six membered heterocyclic compounds (one N )

Page 7: Heterocyclic - faculty.psau.edu.sa · 4-To understand methods of reaction ... It resist electrophilic substitution only in N-atom or at meta-position It is highly susceptible to neucleophilic

Pyridine

important solvent

& base (~ 3o amine)

Reactions:

1) Electrophilic

substitution in

pyridine

EAS (much less

reactive than

benzene ~ nitro)

N

KNO3, H2SO4, 370o

N

NO2

3% yield

H2SO4, SO3, HgSO4

220o, 24 hours

N

SO3

H

Br2, 300o

N N

Br Br Br

+

Friedel-Craftsno reaction

Six membered heterocyclic compounds (one N )

Page 8: Heterocyclic - faculty.psau.edu.sa · 4-To understand methods of reaction ... It resist electrophilic substitution only in N-atom or at meta-position It is highly susceptible to neucleophilic

N

N

N

H Y

Y

H

Y

HN

Y

HN

Y

H

N

Y

H

N

Y

H

N

H Y

N

H Y

Deactivated to EAS due to electronegativity of NitrogenDirects beta due to destabilization of alpha and gamma

Six membered heterocyclic compounds (one N)

Page 9: Heterocyclic - faculty.psau.edu.sa · 4-To understand methods of reaction ... It resist electrophilic substitution only in N-atom or at meta-position It is highly susceptible to neucleophilic

Comparison between benzene and pyridine

1- Benzene symmetrical non-polar but pyridine polar

N N NN N

It resist electrophilic substitution only in N-atom or at meta-position

It is highly susceptible to neucleophilic substitution

Pyridine is less active, than benzene toward electrophilic agents, because nitrogen is more

electronegative, than carbon and acts like an electron withdrawing substituent, including the

meta-directing effect.

Six membered heterocyclic compounds (one N )

N CH3H3C

HNO3

H2SO4 N CH3H3C

NO2

81%

Page 10: Heterocyclic - faculty.psau.edu.sa · 4-To understand methods of reaction ... It resist electrophilic substitution only in N-atom or at meta-position It is highly susceptible to neucleophilic

2- It is basic compound [its basicity less than aliphatic amine]

N:

HCl

CH3 I

N Cl

NCH3 I

Pyridinuim chloride

N-methyl pyridinum Iodide

Six membered heterocyclic compounds (one N )

Comparison between benzene and pyridine

Page 11: Heterocyclic - faculty.psau.edu.sa · 4-To understand methods of reaction ... It resist electrophilic substitution only in N-atom or at meta-position It is highly susceptible to neucleophilic

Like that of benzene, pyridine is resistant to oxidation, side

chain can be oxidized

Similarity

N

CH3

KMnO4

N

COOH

Nicotinic acid 3-pyridine carboxylic acid

Comparison between benzene and pyridine

Six membered heterocyclic compounds (one N )

CH3KMnO4

Toluene

COOH

Benzoic acid

CH2CH3KMnO4

COOH

Benzoic acid

+ + OH2CO2

Page 12: Heterocyclic - faculty.psau.edu.sa · 4-To understand methods of reaction ... It resist electrophilic substitution only in N-atom or at meta-position It is highly susceptible to neucleophilic

It Found in coal tar

N CH3 N N N N CH3

CH3

CH3 CH3 CH3

H3CCH3

2,4,6-collidine2,4-lutidinepicolinepicolinepicoline

α β γ

Oxidation of picolines yields the pyridine carboxylic acids

N

CH3

KMnO4

N

COOH

Six membered heterocyclic compounds (one N )

Sources of Pyridine

Page 13: Heterocyclic - faculty.psau.edu.sa · 4-To understand methods of reaction ... It resist electrophilic substitution only in N-atom or at meta-position It is highly susceptible to neucleophilic

N CH3

KMnO4

N COOH NH

COO

Picolinic acid Zwitter ion

N

KMnO4

N NH

Nicotinic acid Zwitter ion

N

KMnO4

N NH

isonicotinic acid Zwitter ion

CH3 COOH COO

CH3 COOH COO

Six membered heterocyclic compounds (one N )

α

Page 14: Heterocyclic - faculty.psau.edu.sa · 4-To understand methods of reaction ... It resist electrophilic substitution only in N-atom or at meta-position It is highly susceptible to neucleophilic

The 3- isomer is Vitamin

The 4- isomer has been used in the form of its hydrazide in treatment of T.B

N

CONHNH2

Isoniazid isonicotinic acid hydrazid

Six membered heterocyclic compounds (one N )

N CH3

KMnO4

N COOH NH

COO

Picolinic acid Zwitter ion

N

KMnO4

N NH

Nicotinic acid Zwitter ion

N

KMnO4

N NH

isonicotinic acid Zwitter ion

CH3 COOH COO

CH3 COOH COO

Page 15: Heterocyclic - faculty.psau.edu.sa · 4-To understand methods of reaction ... It resist electrophilic substitution only in N-atom or at meta-position It is highly susceptible to neucleophilic

Hantzsch pyridine synthesis

Six membered heterocyclic compounds (one N )

Synthesis of Pyridine

The Hantzsch pyridine synthesis typically uses a 2:1:1 mixture of a β-keto acid (often

acetoacetate), an aldehyde (often formaldehyde), and ammonia or its salt as the

nitrogen donor. First, a double hydrogenated pyridine is obtained, which is then

oxidized to the corresponding pyridine derivative.

Page 16: Heterocyclic - faculty.psau.edu.sa · 4-To understand methods of reaction ... It resist electrophilic substitution only in N-atom or at meta-position It is highly susceptible to neucleophilic

Reaction of Pyridine

B) Aromatic compounds with

Neocleophilic substitution

and Electrophilic substitution

Six membered heterocyclic compounds (one N )

Pyridine behave as both

A) Electrophilic substitution

Tertiary amine with protonation,

alkylation's, acylation,

and N-oxidation

Page 17: Heterocyclic - faculty.psau.edu.sa · 4-To understand methods of reaction ... It resist electrophilic substitution only in N-atom or at meta-position It is highly susceptible to neucleophilic

A: Electrophilic Substitution SE

Reaction types of Pyridine

Pyridine resemble

highly deactivated

benzene derivatives

It undergo nitration ,

sulfonation, and

halogenation

only under very

vigorous condition

chiefly at the 3-

position

N

N

NO2

3- nitropyridine

N

SO3H

3-pyridine sulfonic acid

N

Br

3- bromopyridine

No Reaction

N

Br

3,5-dibromopyridine

Br

+

HNO3, H2SO4

300 C

H2SO4

350 C

Br2

300 C

RX or RCOX

AlCl3

Six membered heterocyclic compounds (one N )

Page 18: Heterocyclic - faculty.psau.edu.sa · 4-To understand methods of reaction ... It resist electrophilic substitution only in N-atom or at meta-position It is highly susceptible to neucleophilic

Why mainly at c-3 ?

N

N N N

H E H E H E

not favoured

NN N

H

EH

E

H

E

not favoured

N N N

H

E

H

E

H

EC-3 attack

C-2 attack

C-4 attack

Six membered heterocyclic compounds (pyridine )

mainly at c-3

Reaction types of Pyridine

A: Electrophilic Substitution SE

elec. (+ ve) par

Page 19: Heterocyclic - faculty.psau.edu.sa · 4-To understand methods of reaction ... It resist electrophilic substitution only in N-atom or at meta-position It is highly susceptible to neucleophilic

In contrast to benzene, Pyridine is very unreactive to SE reaction ?

1- due to electron withdrawing effect of N in the ring

2- the intermediate is destabilized by electro negativity effect of N

N N NN N

3- rapid formation of pyridinium cation …. So resist further SE reaction

N

+ E+

N

E

+ve charge in N will not allow

any other E+ to enter

Six membered heterocyclic compounds (one N )

A: Electrophilic Substitution SE

Reaction types of Pyridine

Page 20: Heterocyclic - faculty.psau.edu.sa · 4-To understand methods of reaction ... It resist electrophilic substitution only in N-atom or at meta-position It is highly susceptible to neucleophilic

B: Neucleophilic Substitution SN

N

N N N

H Nu HNu H Nu

specially stable

NN N

H

Nu

H

Nu

H

Nu

specially stable

N N N

H

Nu

H

Nu

H

Nu

C-3 attack

C-2 attack

C-4 attack

Six membered heterocyclic compounds (pyridine )

Reaction types of Pyridine

Nu. (- ve)

Ortho or

para

Page 21: Heterocyclic - faculty.psau.edu.sa · 4-To understand methods of reaction ... It resist electrophilic substitution only in N-atom or at meta-position It is highly susceptible to neucleophilic

Example

1- Chichibabin Reaction

N N N NH2H

NH2- NaH

stabilized intrmediate

Na+

NaNH2

2-aminopyridine

Six membered heterocyclic compounds (one N )

Reaction of Pyridine

Page 22: Heterocyclic - faculty.psau.edu.sa · 4-To understand methods of reaction ... It resist electrophilic substitution only in N-atom or at meta-position It is highly susceptible to neucleophilic

Example

2- Alkylation or Arylation Reaction by Organolithium compounds

N N N PhH

Ph - NaH

stabilized intermediate

Li+

Ph-Li+

2-phenylpyridine

+ LiH

heatheat

N N N OHOH

Cl - Cl-

stabilized intermediate

NaOH

2-hydroxylpyridine

enol

ClNH

O

2-pyridone

keto

N N N

- Br-

stabilized intermediate

Br

Br

Br NH2

Br

NH2

Br

NH3

Six membered heterocyclic compounds (one N )

Reaction of Pyridine

Page 23: Heterocyclic - faculty.psau.edu.sa · 4-To understand methods of reaction ... It resist electrophilic substitution only in N-atom or at meta-position It is highly susceptible to neucleophilic

C: Reaction at N-1

N

NN

CH3I H3C

CH3

CH3

Br

CH3

I

N-methyl pyridinium iodide

H

+

C CH2

H3C

H3C

Br-

Alkylation

Six membered heterocyclic compounds (one N)

Reaction types of Pyridine

electrophilic

Page 24: Heterocyclic - faculty.psau.edu.sa · 4-To understand methods of reaction ... It resist electrophilic substitution only in N-atom or at meta-position It is highly susceptible to neucleophilic

C: Reaction at N-1

Acylation

N

NN

Ph-CO-Cl

C

Cl

benzoyl chloride

S

SO

O

Ph Cl

OO

Ph

Cl

O Ph

Six membered heterocyclic compounds (one N )

Reaction types of Pyridine

Page 25: Heterocyclic - faculty.psau.edu.sa · 4-To understand methods of reaction ... It resist electrophilic substitution only in N-atom or at meta-position It is highly susceptible to neucleophilic

C: Reaction at N-1

Rx with peracidsRx with lewis acid

N

NN

Pyridine -N-Oxide

AlCl3

CH3-COOO-H

CH3COOH + H2

O2

O

AlCl3

Six membered heterocyclic compounds (one N )

Reaction types of Pyridine

Page 26: Heterocyclic - faculty.psau.edu.sa · 4-To understand methods of reaction ... It resist electrophilic substitution only in N-atom or at meta-position It is highly susceptible to neucleophilic

Pyridine N-oxide

N

O

N

O

To activate SE

To activate SN

N

O

N

O

N

O

N

O

N

O

N

O

Six membered heterocyclic compounds (one N )

Reaction types of Pyridine

Page 27: Heterocyclic - faculty.psau.edu.sa · 4-To understand methods of reaction ... It resist electrophilic substitution only in N-atom or at meta-position It is highly susceptible to neucleophilic

N

O

Stabilized intermediate

N

O

HNO3\H2SO4

H NO2

N

O

N

NO2

H+

NO2

PCl3

heat+ POCl3

Electrophilic ( Nitration)

Six membered heterocyclic compounds (one N )

Reaction types of Pyridine

Page 28: Heterocyclic - faculty.psau.edu.sa · 4-To understand methods of reaction ... It resist electrophilic substitution only in N-atom or at meta-position It is highly susceptible to neucleophilic

Six membered heterocyclic compounds with one X

Neucleophilic

N

O

Stabilized intermediate

N

O

NaOCH3

H3CO NO2

N

O

N

OCH3

-NO2-

OCH3

PCl3

heat

+ POCl3

NO2

Reaction types of Pyridine

Page 29: Heterocyclic - faculty.psau.edu.sa · 4-To understand methods of reaction ... It resist electrophilic substitution only in N-atom or at meta-position It is highly susceptible to neucleophilic

D: Oxidation and Reduction

N

NH

NH

1,4-dihydropyridinePipiridine

H2, pt, H

Cl

25CNa

\ EtO

H

Reduction

Oxidation As before oxidation of Picolines

Six membered heterocyclic compounds (one N )

Reaction types of Pyridine

Page 30: Heterocyclic - faculty.psau.edu.sa · 4-To understand methods of reaction ... It resist electrophilic substitution only in N-atom or at meta-position It is highly susceptible to neucleophilic

Six membered heterocyclic compounds with tow N

Diazines

N

N

N

N

N

N

pyridazinepyrimidine pyrazine

-Found in folic acid

& cigarette derivative.

- Less basic than

the other two

Used only in research

as building block for

more complex comp.

Three neucleobases

found in nucleic acid

cytosine, thyamine, uracil

Page 31: Heterocyclic - faculty.psau.edu.sa · 4-To understand methods of reaction ... It resist electrophilic substitution only in N-atom or at meta-position It is highly susceptible to neucleophilic

NH

N

NH

NH

NH

NH

NH2

O

O

O

H3C

O

O

Cytosine C

Thyamine T

Uracil U

DNA A________ T

G________ C

RNA A________ U

G________ C

Chemical properties of Pyrimidines

in common with pyridine, as number of N-atoms in the ring increase

the ring π- electrons become less energetic

So SE gets more difficult while SN gets easier

Six membered heterocyclic compounds with tow N

Diazines

In DNA & RNA, these bases form H-bonds with their complementary Purines

Page 32: Heterocyclic - faculty.psau.edu.sa · 4-To understand methods of reaction ... It resist electrophilic substitution only in N-atom or at meta-position It is highly susceptible to neucleophilic

NN

1

2

3

45

6

7

81

2

3

45

6

7

8

Quinoline

Benzo[b]pyridine

1-azanaphthaline

Isoquinoline

Benzo[c]pyridine

2-azanaphthaline

Both are weak bases

Both undergo SE more easly than pyridine in position 5 and 8

on benzoid ring, no on the deactivated N-ring Why?

Like pyridine , N-ring of quinoline and isoquinoline undergo SN

at α position

Six membered heterocyclic compounds (pyridine )

N

Acridine

Fused ring

Page 33: Heterocyclic - faculty.psau.edu.sa · 4-To understand methods of reaction ... It resist electrophilic substitution only in N-atom or at meta-position It is highly susceptible to neucleophilic

N

C 5

C 6

C 8

N

N

N

N N

EH E

H

E

H

E H

EH

Six membered heterocyclic compounds (pyridine )

Quinoline

N

C-2

C-4

N

N N

Nu H Nu H

Nu

H

specially stable

specially stable

N1

2

3

45

6

7

8

Page 34: Heterocyclic - faculty.psau.edu.sa · 4-To understand methods of reaction ... It resist electrophilic substitution only in N-atom or at meta-position It is highly susceptible to neucleophilic

N

C-1

C-3

N

N N

specially stable

specially stable

H Nu

Nu

H

Nu

H

Six membered heterocyclic compounds (pyridine )

Isoquinoline

N

1

2

3

45

6

7

8

Page 35: Heterocyclic - faculty.psau.edu.sa · 4-To understand methods of reaction ... It resist electrophilic substitution only in N-atom or at meta-position It is highly susceptible to neucleophilic

Skraup Synthesis+

CH2OH

CHOH

CH2OH

+

NO2

N

NH2+ C6H5NH2 + H2O

H2SO4

FeSO4

Six membered heterocyclic compounds (pyridine )

Synthesis of Quinoline

1- Dehydration of glycerol by hot H2SO4CH2

HC

HC

OH

OH

H

H

O

CH2

CH

HC O

Acrolein

+ 2 H2OH2SO4 / heat

2- Nuecleophlic addition

C

NH2

O

HCH

CH2

NH

CH2

CH2

HC

O

+ H+

- H+

Page 36: Heterocyclic - faculty.psau.edu.sa · 4-To understand methods of reaction ... It resist electrophilic substitution only in N-atom or at meta-position It is highly susceptible to neucleophilic

NH

CH2

CH2

HC

O

+ H+

NH

CH2

CH2

HC

OH

Dehydration

NH

+ H2O

Six membered heterocyclic compounds (pyridine )

Synthesis of Quinoline (Skraup Synthesis)

3- Elecetrophlic attack on aromatic ring by electron deficient Carbonyl carbon of

protonated aldehyde

4- Oxidation by nitrobenzene

NH

3 + C6H5NO2

N

+ C6H5NH2 + 2 H2O

H+

Page 37: Heterocyclic - faculty.psau.edu.sa · 4-To understand methods of reaction ... It resist electrophilic substitution only in N-atom or at meta-position It is highly susceptible to neucleophilic

Six membered heterocyclic compounds (pyridine )

(Bischler Nepieralski Synthesis)

NH2

CH3COCl

NHC

CH3

OP2O5

heat

N

CH3

Pd \ heatN

CH3

+H2

Synthesis of Quinoline

Page 38: Heterocyclic - faculty.psau.edu.sa · 4-To understand methods of reaction ... It resist electrophilic substitution only in N-atom or at meta-position It is highly susceptible to neucleophilic

N

NN

N N

N

N

NO2

NO2

major

minor

SO3H

SO3H

Br

Br

Br2

HNO 3

H 2SO 4

\ 0c

H 2SO 4

300c

majorminor

1 : 1

Nitration

Halogenation

Sulfonation

Electrophilic Substitution

Six membered heterocyclic compounds (pyridine )

Reaction of Quinoline

Page 39: Heterocyclic - faculty.psau.edu.sa · 4-To understand methods of reaction ... It resist electrophilic substitution only in N-atom or at meta-position It is highly susceptible to neucleophilic

Nucleophilic Substitution

N

NN

N

NH

KOH

orNaOH

Bu-Li

major minor

OK

O

2-quinolone

Bu

Bu

N

NH2

N NH2

majorminor

1)KN

H2

2)NH

3

Amination

Hydroxylation

Alkylation

Or Arylation

with organo-

Six membered heterocyclic compounds (pyridine )

Reaction of Quinoline

Page 40: Heterocyclic - faculty.psau.edu.sa · 4-To understand methods of reaction ... It resist electrophilic substitution only in N-atom or at meta-position It is highly susceptible to neucleophilic

Oxidation & Reduction

NNH

NH

NH

H2\pt

LiAlH4

H2\pt

1,2-dihydro quinoline

1,2,3,4-tetrahydro quinoline

cis,trans- decahydro quinoline

Reduction

Oxidation

N

N

NH

COOH

COOH

COOH

COOH

O

O

aq KMnO4

alkaline KMnO

4

neutral

KMnO4

quinolinic acid

phthalic acid

Phthalimide

Six membered heterocyclic compounds (pyridine )

Reaction of Quinoline

Page 41: Heterocyclic - faculty.psau.edu.sa · 4-To understand methods of reaction ... It resist electrophilic substitution only in N-atom or at meta-position It is highly susceptible to neucleophilic

Fused Six membered heterocyclic compounds with more

Than one N

Purines

HN

NNH

NHN

NH

NH

NHN

NH

NH

HN

O

O

O

O

O

O

Hypoxanthine Xanthine uric acid

Contain pyrimidine fused to imidazole ring

Page 42: Heterocyclic - faculty.psau.edu.sa · 4-To understand methods of reaction ... It resist electrophilic substitution only in N-atom or at meta-position It is highly susceptible to neucleophilic

HN

NH

NH

HN N

N NH

N

N

N NH

N

N

N NH

N

HN

N NH

NN

N NH

N

N

NNH

N

O

O

O

O

Cl

Cl

Cl

NH2

Cl

Cl

NH2I

IH2N

POCl3 aq. NH3

1) NaO

H

2) aq. N

H 3,

heat

HI \PH4I

Zn dust

1) HI2) Zn dust

uric acid

guanine

adinine

purine

Fused Six membered heterocyclic compounds with more

Than one N

Page 43: Heterocyclic - faculty.psau.edu.sa · 4-To understand methods of reaction ... It resist electrophilic substitution only in N-atom or at meta-position It is highly susceptible to neucleophilic

Miscellaneous

NH

S

Phenothiazine

Dibenzothiazine or Thiodiphenylamine

Drugs containing this nucleus used as antipsychotic and

adrenergic blocker

Fused Six membered heterocyclic compounds

N

N

1,4-benzodiazepine

Hypnotic, Sedative, Anxiolytic

Anticonvulsant, Muscle relaxant

Properties

N

N

Cl

O

CH3

Valium

H.W find 2 drugs and draw their structures

Page 44: Heterocyclic - faculty.psau.edu.sa · 4-To understand methods of reaction ... It resist electrophilic substitution only in N-atom or at meta-position It is highly susceptible to neucleophilic

N

N

Cl

OCH3

Cl

NH2

C O+ Cl C

O

CH2Cl

Cl

HN

C O

C

O

CH2

Cl

NH3

N

N

Cl

OH

CH3I

Valium

Preparation of Valium

Fused Six membered heterocyclic compounds

Miscellaneous

Page 45: Heterocyclic - faculty.psau.edu.sa · 4-To understand methods of reaction ... It resist electrophilic substitution only in N-atom or at meta-position It is highly susceptible to neucleophilic