healthcare & life sciences data electronic engineering ......healthcare data is exploding. data...
TRANSCRIPT
llia Tulchinsky,Engineering Director, Google Cloud Healthcare and Lifesciences
Unlocking Electronic Healthcare & Life Sciences Data
More data was created in the last two years than the previous 5,000 years of humanity.*
*SINTEF. "Big Data, for better or worse: 90% of world's data generated over last two years." ScienceDaily. ScienceDaily, 22 May 2013. sciencedaily.com/releases/2013/05/130522085217
● More plug-and-play layout options
● Full bleed and close-to-full bleed photo layouts
● Slides with product branding
● Slides with a dark background
● Scaled down type overall to allow for more information
● Consistent placement for branding on each slide
● Editable devices for screenshots
● Lots more awesome tweaks based on your feedback!
GGCATGACTA
Traditional Genomics In Home Monitoring
Connected medical devices
Personal Devices & Apps
● EHRS● ICD-10 codes● Clinical Trials
By 2015, genomics data was doubling every 7 months **
● Motion sensors● Smart speakers
Healthcare data is exploding
Data
Analytics and Actionable Insights
Re-engineering and Instrumentation
AI Driven Automation
The goal: data driven enterprise
Big Query
Google CloudHealthcare API
Cloud Machine Learning Engine
Cloud Datalab
Pub Sub
Cloud as a data aggregation platform
GGCATGACTA
DataInsights & Actions
Align and harmonize it into a warehouse
Augment with analytics
Analyze with other data (including cross-modality)
Use it as the basis for machine learning
So you’ve ingested this data into Cloud: Now what?
SecureData encrypted at rest and in motion with fine-grained access control
SimpleAnalyze data from across Google Cloud Platform using SQL
ScalableMulti-petabyte Horizontal scalability, high performance
ShareablePublic and commercial datasets to enhance analysis
Google Cloud Platform’s enterprise data warehouse for analytics
SafeFully-managed service with low TCO
BI/Visualization
BigQuery for scalable analytics
Coded numeric/text
Radiology PACS
FHIR API HL7v2 API
DICOM API
OMICSVariantTransformsGGCATGACTA
Electronic Health Record
Images
Variant, RNASeq, ...
Combine modalities for deep insight
Biomedical Datasets from NIHSTRIDES (Science & Tech Research Infrastructure for Discovery, Experimentation, and Sustainability)
Global Health from The World Bank
Nutrition, reproductive health, education, immunization, and diseases from 200+ countries
RxNorm{ingredient + strength + dose form} for clinical drugs, brand names, and drug classes
Human Variant Annotation DatasetsOriginal NCBI Variant Call Files (VCF) files, NHLBI Exome Sequencing Project (ESP) and ensembl
HCPCS Level II from US Health & Human ServicesBilling codes for ambulance services and supplies used outside a physician’s office
Hospitals registered with MedicareAddresses, hospital types and quality of care for 4000+ Medicare-certified and VA hospitals
CMS Medicare utilization and paymentsProcedures, services, and prescription drugs provided by hospitals, physicians, and others
National Plan and Provider Enumeration SystemNPI, name, speciality, and practice address and FOIA-disclosable health care provider data
Contagious diseasesWeekly surveillance reports by city and state of nationally notifiable diseases from 1888 onwards
100+ public data sets
Keys for success with Machine Learning
ProblemHave a well defined problem with a specific answer
DataNeed a large number of clear examples with consistent answer
SuccessHave a clear success metric. How good is good?
ValueAssuming success according to the metric, what is the value to the business?
IntegrationHow do I integrate the tool into my workflow so that it can be used by the people who need it?
Develop and train your own models
Machine Learning as an API
Cloud Vision API
Cloud Speech API
Cloud Machine Learning Engine
Cloud Translation API
Cloud Natural Language API
Cloud VideoIntelligence
DataFlowDataProc
Hosted Analytics and TensorflowGoogle developed and trained models
Start with a Google modelcustomize with your dataCloud AutoML
Cloud AutoML VisionCloud AutoML NLOthers to Follow
Three ways GCP is bringing ML to the market
More advanced problem?
Try Tensorflow on Cloud Machine Learning Engine
Biomedical Datasets from NIHSTRIDES (Science & Tech Research Infrastructure for Discovery, Experimentation, and Sustainability)
Global Health from The World BankNutrition, reproductive health, education, immunization, and diseases from 200+ countries
RxNorm{ingredient + strength + dose form} for clinical drugs, brand names, and drug classes
Human Variant Annotation DatasetsOriginal NCBI Variant Call Files (VCF) files, NHLBI Exome Sequencing Project (ESP) and ensembl
HCPCS Level II from US Health & Human ServicesBilling codes for ambulance services and supplies used outside a physician’s office
Hospitals registered with MedicareAddresses, hospital types and quality of care for 4000+ Medicare-certified and VA hospitals
CMS Medicare utilization and paymentsProcedures, services, and prescription drugs provided by hospitals, physicians, and others
National Plan and Provider Enumeration SystemNPI, name, speciality, and practice address and FOIA-disclosable health care provider data
Contagious diseasesWeekly surveillance reports by city and state of nationally notifiable diseases from 1888 onwards
100+ public data sets
https://cloud.google.com/healthcare/
https://cloud.google.com/
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healthcare/docs/resources/nih-chest
https://github.com/GoogleCloudPlatform/healthcare/tree/master/imaging/ml_codelab
Healthcare API, datasets, codelabs
Thank you.