gpc/sec software for openlab cds
TRANSCRIPT
GPC/SEC Software for
OpenLab CDS
User Guide
GPC/SEC Software for OpenLab CDS User Guide
Notices
© Agilent Technologies, Inc. 2019
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Manual Part Number
D0000361
Edition
08/2019
Produced in Germany
Agilent Technologies, Inc.
Software Revision
This guide is valid for version 1.3 of the
Agilent GPC/SEC software for OpenLab
CDS
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Contents
GPC/SEC Software for OpenLab CDS User Guide 3
Contents
Contents 3
1. Introduction 5
2. Overview 9
3. Getting Started 15
4. Workflows 19
5. The GPC/SEC Processing Method 49
6. The GPC Results View 65
7. The GPC Distributions View 71
8. The GPC Calibrations Plot View 73
9. Reporting 75
10. Compliance 94
11. Exporting Information 98
12. Appendix 102
Contents
4 GPC/SEC Software for OpenLab CDS User Guide
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Introduction
GPC/SEC Software for OpenLab CDS User Guide 5
1. Introduction
Installation and configuration of the software is covered in the Installation Guide (G7860-90200) supplied with the software.
This manual will help you to familiarize yourself with the Agilent Technologies GPC/SEC software for the OpenLab CDS platform. It describes in detail the features and evaluation parameters of the software and contains the following information:
1 Overview
This chapter describes the general compatibility, configuration and features of the software.
2 Getting Started
This User Guide assumes a working knowledge of the OpenLab CDS platform for LC applications. This chapter outlines the areas of the OpenLab platform for which you need a basic level of understanding, and information about a GPC tutorial that provides you with an initial familiarization of the GPC/SEC software.
3 Workflows
This chapter describes the general workflows when using your software for GPC/SEC applications. They are broadly defined as:
▪ Using the Data Acquisition module to setup your instrument to collect data.
Introduction
6 GPC/SEC Software for OpenLab CDS User Guide
▪ Using the Data Analysis module to perform processing of the collected data
This second section is broken down into the follow workflows:
▪ Defining a GPC/SEC Processing Method for GPC
▪ Generating a GPC Column Calibration using the three calibration options.
▪ Reviewing the GPC column calibration
▪ Processing a Sample Injection
▪ Reviewing Data & Results
4 The GPC/SEC Processing Method
This chapter describes the GPC specific additions to the processing method and goes into the detail of each of the GPC parameters, their function and dependencies.
5 The GPC Results View
This chapter describes the content and functions available in the GPC Results view which is added to the Results layout. This GPC specific view consists of the following tabs:
▪ The Peak Results Tab
▪ The GPC Column Calibration Tab
▪ The MW Ranges Tab
▪ The Percentage Fractions Tab
6 The GPC Distributions View
This chapter describes the content and functions available in the GPC Distributions view which is added to the Results layout.
7 The GPC Calibrations Plot View
This chapter describes the content and functions available in the GPC Calibrations Plot view which is added to the Results layout.
Introduction
GPC/SEC Software for OpenLab CDS User Guide 7
8 Reporting
This chapter provides an overview of the options available, the GPC specific report items supplied by the software and the GPC and SEC specific report templates provided.
9 Compliance
This chapter provides an overview of the options provided by the GPC/SEC Software to allow the software to be used in a compliant environment.
10 Exporting Information
This chapter provides an overview of the options available to export GPC data and results in various standard formats.
11 Appendix
The Appendix provides information on:
▪ The function of the GPC License
▪ The default GPC & SEC Report Templates supplied.
▪ Additions to the OpenLab Platform
Introduction
8 GPC/SEC Software for OpenLab CDS User Guide
Terms and Abbreviations
Table 1 Terms and Abbreviations used in this document
Term Description
CDS Chromatography Data System
AIC Agilent Instrument Controller – part of a distributed
Client/Server system
GPC Gel Permeation Chromatography
SEC Size Exclusion Chromatography
FRM Flow Rate Marker
Overview
GPC/SEC Software for OpenLab CDS User Guide 9
2. Overview
The GPC/SEC software provides a data analysis module for conventional GPC/SEC calibration and calculations options which integrates into the Data Analysis component of the OpenLab CDS platform. The GPC/SEC software uses the existing workflows, processing options, data storage, reporting and compliance options supplied by the OpenLab CDS platform. It is able to process any signal from a concentration detector collected or imported into an OpenLab CDS project.
Compatibility
Target OpenLab Platform
Standard OpenLab CDS installation.
Configurations
All three OpenLab CDS configurations are supported:
▪ Workstation
▪ Workstation Plus
▪ Client/Server configuration
Overview
10 GPC/SEC Software for OpenLab CDS User Guide
Instrument Control and Data Collection
The GPC/SEC software is purely a data analysis module, no additions or changes are made to the data acquisition part of the OpenLab platform.
The technique of GPC/SEC is an isocratic LC application (organic or aqueous) that uses GPC/SEC specific columns to perform the separation. This means any LC system supported by the OpenLab CDS platform that is capable of running in an isocratic configuration can be used.
Typical detectors used for GPC/SEC are:
▪ Refractive Index (RI)
▪ UV detector, Multiple wavelength (MWD), variable wavelength (VWD) and diode array (DAD)
▪ Evaporative Light Scattering Detector (ELSD)
▪ 3rd party via an analog to digital device
The detector required is dependent on the application.
The GPC/SEC software can process any chromatograms;
▪ Collected by the OpenLab Data Acquisition component of the platform
▪ Either into an OpenLab CDS project from the ChemStation, EZChrom or Galaxie platforms
Licensing
A GPC specific Data Analysis license is delivered as part of the GPC/SEC Data Analysis software.
▪ No GPC/SEC specific ‘Data Acquisition’ license is required
▪ The GPC/SEC license is provided in the standard 60-day startup license
▪ The GPC/SEC license is installed through the OpenLab Control Panel
One license provides a “seat” of GPC/SEC analysis on a Data Analysis workstation or client configured for GPC/SEC. If a GPC/SEC Analysis license is not available.
▪ The user is NOT able to perform “GPC/SEC processing”
Overview
GPC/SEC Software for OpenLab CDS User Guide 11
▪ The GPC/SEC software will function as a ‘GPC/SEC Results reviewer’
GPC/SEC Features
The GPC/SEC software provides a data analysis module for conventional GPC/SEC calibration and calculations options. The core functions provided by the software are the ability to:
▪ Create and modify a GPC/SEC processing method
▪ Generate a new GPC/SEC column calibration
▪ Review an existing GPC/SEC column calibration
▪ Process injections using the GPC/SEC column calibration
▪ Review the results of existing processed injections
▪ Generate reports from one or more injection
"GPC /SEC Specific" Processing Method Type
A "GPC/SEC Specific" processing method type is added to the processing method options and is based on the standard GC/LC Area Percent method template provided by OpenLab. The GPC/SEC specific processing parameters are accessed from a “GPC specific” section of the method and are stored as part of the method.
GPC/SEC Column Calibration
A GPC/SEC processing method must be calibrated in order to perform GPC/SEC analyses on sample injections. A GPC column calibration is generated from injections identified with the Sample Type set as ‘Cal. Std.’. The GPC column calibration is stored as part of the processing method used. Only one GPC column calibration can exist for the method at any one time.
Overview
12 GPC/SEC Software for OpenLab CDS User Guide
General GPC/SEC Options
The GPC/SEC software provides the ability to:
▪ Select the detector signal to be used for GPC processing. If multiple detector signals are collected for injections, the detector signal to be used can be selected. E.g. the Refractive index (RI) signal from an RI / UV combination or a single UV signal from multiple UV signals. To process sample injections, the detector signal used to generate a GPC Column Calibration must be present in the sample injections.
▪ Use Flow Rate Correction using the standard marker method.
▪ Use the Universal Calibration method to account for different polymer types between the calibrant(s) and samples to be evaluated.
GPC/SEC Column Calibration Options
A GPC column calibration can be generated using the following standard calibration methods:
▪ Narrow Standard Calibration
▪ Broad calibration options (Hamielec or Integral)
GPC/SEC Calculation Options
For each integrated peak, the following information can be calculated:
▪ The Molecular Weight (MW) Averages & Polydispersity (PD)
▪ The MW distribution plot
▪ The Cumulative distribution plot
▪ The percentage of material within defined MW limits
▪ The MW at specific peak fractions
Overview
GPC/SEC Software for OpenLab CDS User Guide 13
GPC/SEC Results
The GPC/SEC software provides the ability to:
▪ View the table of MW averages and related information for one or a series of processed injections
▪ Overlay the chromatograms and derived plots (MW distribution & cumulative plot) for one or a series of injections
The processed injections can either be within the same results set or across results sets within the loaded project.
The GPC Results are stored as part of the processed injection.
Reporting
The OpenLab reporting tool can be used to create GPC specific report templates that provide the ability to generate:
▪ A report per sample injection
▪ A summary report for a series of injections
The processed injections can either be within the same results set or across results sets within the loaded project.
E.g.
▪ A table of MW averages for a series of injections
▪ Overlay of plots for a series of injections
GPC report items are supplied which comprise of a series of GPC specific tables and plots.
Two sets of default report templates are supplied, one set for typical GPC applications and the second for SEC applications.
Compliance
Storage of Parameters and Results
The GPC specific processing parameters, column calibrations, GPC results and report templates are all stored within the OpenLab CDS system.
▪ The GPC specific processing parameters and GPC column calibration are stored as part of the processing method
Overview
14 GPC/SEC Software for OpenLab CDS User Guide
▪ The GPC Results are stored as part of the processed injection
Audit Trails
The GPC/SEC software hooks into the audit trails & diagnostics features within the OpenLab CDS system.
GPC Privileges & Roles
The GPC/SEC software uses the compliance, roles and privileges features of OpenLab Shared Services and provides three GPC specific privileges:
▪ Ability to edit GPC Parameters in a processing method
▪ Ability to create and modify a GPC column calibration
▪ Ability to perform a GPC analysis
The GPC specific privileges are assigned to default roles provided within the OpenLab CDS platform.
Export Options
The standard export features provided by OpenLab CDS are available within the various GPC specific windows and grids, allowing graphics (chromatograms, calibrations & distribution plots) and the contents of tables and grids to be exported to various standard formats.
In addition, an option is available which allows the GPC/SEC results of a processed injection to be exported as a simple ASCII file. The generated ASCII file can be loaded directly into Excel and provides access to the full GPC results and slice by slice data of the processed peak(s) within the injection.
Getting Started
GPC/SEC Software for OpenLab CDS User Guide 15
3. Getting Started
Familiarity with the OpenLab CDS platform for LC Applications
This User Guide assumes a working knowledge of the OpenLab CDS platform for LC applications.
Before using the GPC/SEC software it is strongly recommended that you learn the basics of using your Agilent LC system with OpenLab CDS by following the interactive curriculum supplied in the OpenLab Help & Learning tool.
Home > Get Started > Getting Started > OpenLab CDS with LC This interactive curriculum covers the following topics.
User Interface Learn how to navigate the Control Panel and Acquisition interfaces to use your
system effectively. Topics include launching instruments, using and creating
custom layouts.
LC Acquisition
Methods
Learn how to manipulate acquisition methods to control your Agilent LC
instrument. Topics include modifying, saving, and downloading methods for
instrument control.
Run Submission Learn how to use your method to analyze samples to acquire data. Topics include
single sample analysis submission and using the run queue.
Data Analysis Learn how to create a processing method to generate results from your captured
data. Topics include result package overview, integration, compound identification,
and single level calibration.
Reporting Learn how to reprocess data and generate reports with your processing method.
Topics include using report templates to print single sample reports and make
basic template modifications.
Getting Started
16 GPC/SEC Software for OpenLab CDS User Guide
Familiarization with the GPC/SEC Software
Once you are familiar with the basics of using your Agilent LC system, the GPC Help & Learning system should be used to familiarize yourself with the various functions & features of the GPC/SEC Software. The GPC Help & Learning system can be accessed from the program item OpenLab GPC Help or using F1 when focused on a GPC specific window or dialog. The Online Help has the following structure:
Getting Started
Familiarization with the GPC/SEC software
• Introduction to the GPC/SEC software
• Familiarization with the Data Analysis user interface
GPC/SEC Software Tutorial
This tutorial consists of a series of videos which guide you through the various aspects of the GPC/SEC software using a set of GPC/SEC data. This data is supplied on the GPC install media and can be imported into a project on your system. The tutorial covers the following:
• Aims of the tutorial
• Importing the GPC tutorial data into a project
• Viewing the tutorial data in the project
• Generating a GPC processing method
• Calibrating the GPC method using the narrow standards
• Processing the samples
• Reviewing the processed samples
• Reporting
Workflows
This section provides information about the general workflows.
▪ Data Acquisition
▪ Data Analysis
Getting Started
GPC/SEC Software for OpenLab CDS User Guide 17
▪ Defining a GPC/SEC Processing Method
▪ Generating a GPC Column Calibration
• Creating a GPC Column Calibration (Narrow)
• Creating a GPC Column Calibration (Broad Hamielec)
• Creating a GPC Column Calibration (Broad Integral)
▪ Processing a Sample Injection
▪ Reviewing Data & Results
A series of topics that describe the GPC specific views and the parameters available. These can be accessed directly using the F1 key when focused on a GPC specific window or dialog.
▪ The GPC/SEC Processing Method
▪ The GPC Results View
▪ The GPC Distributions View
▪ The GPC Calibrations Plot View
▪ Reporting
Full information about the features and options available are described in the OpenLab Help & Learning tool. The following topics describe:
o GPC specific additions to the OpenLab Reporting module.
o The Default GPC & SEC Report Templates supplied.
Getting Started
18 GPC/SEC Software for OpenLab CDS User Guide
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Workflows
GPC/SEC Software for OpenLab CDS User Guide 19
4. Workflows
The general workflow when using your software for GPC/SEC applications can be broadly defined as:
1 Using the Data Acquisition module to setup your instrument and collect data
2 Using the Data Analysis module to perform data analysis of the collected data
Data Acquisition
The GPC/SEC software is purely a data analysis module and does not provide any additional functionality to the Data Acquisition module. As the technique is an isocratic application (organic or aqueous) that uses GPC/SEC specific columns to perform the separation, any LC system supported by the OpenLab CDS platform capable of running in an isocratic configuration can be used.
The Use of Sample Types for GPC/SEC applications
The Sample Type ‘Cal. Std.’ is used by the software to identify injections that are GPC/SEC calibrants. This can be defined at time of data acquisition or can be set in the Injection List view in the Data Analysis program.
Workflows
20 GPC/SEC Software for OpenLab CDS User Guide
Data Analysis
Once data is available to process in a project, the workflows for performing GPC/SEC analyses can be broadly summarized into the following:
1 Defining a processing method.
2 Generating a GPC column calibration from one or more calibrants linked to the processing method.
3 Reviewing the GPC column calibration.
4 Processing injections using the stored GPC column calibration linked to the processing method.
5 Reviewing the results of the processed injections.
Defining a GPC/SEC Processing Method
Defining a processing method can be broken down into the following key areas:
General Data Processing Parameters
The following parameters need to be defined:
Integrator to use A processing method can be setup to use either the ChemStation or
EZChrom integrators. The default option is the ChemStation integrator.
Integration Events Integration events need to be defined and fine-tuned for the acquired
data from your GPC instrument.
The manual integration option allows the integration of individual
peaks identified by the integrator to be changed by interactively
deleting the peak or editing the peak start, peak end, and peak
baseline.
System Suitability Optional, not required to perform GPC/SEC data analysis.
Tools Optional, not required to perform GPC/SEC data analysis.
Reports / Injection Report Optional. Define the report(s) required and destination for each
processed injection.
Workflows
GPC/SEC Software for OpenLab CDS User Guide 21
GPC Specific Parameters
General Options
The following parameters on the GPC/GPC Method/General Tab need to be defined:
Signal to use Multiple detector signals can be collected for injections, but only one
detector signal can be processed by the GPC software at any one time.
E.g. the Refractive index (RI) signal from a RI / UV combination or a
single UV signal from multiple UV signals.
To process sample injections. the detector signal used to generate a
GPC Column calibration must be present in the sample injections.
Flow Rate Correction Optional.
This option allows injections to be corrected for variation in flow rate
using the standard marker method. To use flow rate correction, a
"marker component" must be included in all samples.
Universal Calibration Optional.
The Universal Calibration method can be applied to account for
different polymer types between the calibrant(s) used to generate a
GPC column calibration and the polymer samples to be evaluated. This
method requires Mark-Houwink constants, K and α (Alpha) values for
both sample and calibrants.
The default values provided are for Polystyrene in THF at ambient
temperature.
GPC Calibration Specific Options
Select the calibration method to generate the column calibration on the GPC/GPC Method/Column Calibration Tab:
Column Calibration Type Narrow Standard Broad Hamielec Broad Integral
Polynomial Curve Fit Select the order of fit Not applicable Select the order of fit
Cal.Std. Mark-Houwink parameters Optional Optional Optional
Peak Identification Tab Define this table Not applicable Not applicable
Broad Hamielec Parameters Tab Not applicable Define this table Not applicable
Broad Integral Tab Not applicable Not applicable Define this table
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22 GPC/SEC Software for OpenLab CDS User Guide
The options above are described in more detail in the next section.
GPC Analysis Specific options
Two post data analysis options are available.
GPC/GPC Method/MW Range Tab If the percentage of material within specific MW ranges of an
integrated peak are required, then setup the parameters
required in this tab.
GPC/GPC Method/Percentage
Fractions Tab
If the molecular weights at specific percentage area fractions of
an integrated peak are required, then setup the parameters
required in this tab.
Save the processing method once all parameters have been defined.
NOTE Ensure all processing parameters are defined prior to processing injections either to
calibrate or evaluate samples. If any changes are made to the processing method after for
example, generating a GPC column calibration, then changes to the processing method
will make the GPC column calibration inconsistent with the processing method and any
processed injections will be marked as inconsistent. The injections of the GPC calibrants
will need to be reprocessed to regenerate the GPC column calibration
Workflows
GPC/SEC Software for OpenLab CDS User Guide 23
Generating a GPC Column Calibration
The software provides three options of generating a GPC column calibration. These options are defined in the GPC/GPC Method/Column Calibration Tab of the processing method and are:
1 From a series of Narrow Standard Calibrants
Inputs:
RT of calibrant peaks
Mp of calibrant peaks
Polynomial curve order to apply
A series of “Narrow Standards” of
known peak MW (Mp)
GPC Column Calibration
Plot of Log(MW) –v- Peak RT
2 Using the Broad Hamielec Method
Inputs:
Target Mn & Mw averages
Target Tolerance
Maximum Number of Iterations
A “Broad Standard” of
known Mn & Mw
GPC Column Calibration
Plot of Log(MW) –v- Peak RT
(curve fit order 1)
3 Using the Broad Integral Method
Inputs:
Integral table
(% Cumulative Weight Fraction
and Molecular Weight)
Polynomial curve order to apply
A characterized
“Broad Standard
GPC Column Calibration
Plot of Log(MW) –v- Peak RT
The procedure to generate a column calibration depends on the selected calibration method. These procedures are described in the following section.
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24 GPC/SEC Software for OpenLab CDS User Guide
The Use of ‘Sample Types’ for GPC
‘Sample Type’ In all three calibration methods, the ‘Sample Type’ should be set to Cal. Std. in the Injection List window for all injections that are to be used to generate a GPC column calibration.
‘Run Type’ When using a series of Narrow Standards to generate a GPC Column calibration, the ‘Run Type’ needs to be set to ‘Clear all calibration’ for the first of the calibrant of a series. This ensures that a new GPC column calibration is created.
Workflows
GPC/SEC Software for OpenLab CDS User Guide 25
1 Creating a GPC Column Calibration (Narrow)
The most common method of generating a column calibration is to use a series of Narrow Standards. A series of narrow dispersity polymers from the same homologous series are dissolved in the eluent and injected on the column set. Each of the standards should have known Peak Molecular Weight (Mp) value. These values will have been provided on the certificate of analysis of the calibrants. The process of creating a GPC Column Calibration from a series of Narrow standards is a two-step process.
• Step 1 – Creating the Peak Identification Table
• Step 2 – Using the Peak Identification Table to generate a GPC Calibration
The process is summarized below.
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26 GPC/SEC Software for OpenLab CDS User Guide
Step 1 – Creating the Peak Identification Table
The Mp values of the Narrow standards to be used for generating a GPC column calibration need to be predefined in the GPC processing method to be used by setting up a Peak Identification Table. This table needs to contain an entry for each calibrant consisting of, the expected retention time of the peak maximum and its associated Mp.
Narrow Standards Processing Method
Require a series of “Narrow Standards”
of known peak MW (Mp)
Identify the expected RT values of calibrants & assign
the Mps from the certificate of analysis of the
calibrants.
Define the curve fit to apply
Peak Identification Table
Stored in the processing method
This Peak Identification Table provides the ability to pre-define a calibration template of calibrants in a GPC processing method. This processing method can be stored as a master method for a specific GPC application. This master method provides the ability to generate a column calibration without the need for an operator to manually define the Mp values of the calibrant set.
Workflows
GPC/SEC Software for OpenLab CDS User Guide 27
Step 2 – Using the Peak Identification Table to generate a GPC Calibration
Once the Peak Identification table has been completed, this ‘template’ can be used to generate a GPC column calibration either from the set of calibration standards used to define the Peak Identification table, or from subsequent injections of the same calibrant set run under the same chromatographic conditions.
Processing Method
Peak identification table
Narrow Standards
Process the Calibrants
GPC Column Calibration
Plot of Log(MW) –v- Peak RT
Stored in the processing method
The process to generate a GPC column calibration using narrow standards is described below.
Step 1a Setup the GPC processing method
Step 1b Define the Peak Identification Table in the processing method
Step 2a Create the column calibration
Step 2b View the generated column calibration
Step 2c Fine tune the column calibration
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Step 1a. Setup the GPC Processing Method for Narrow Standard Calibration
Setup the processing options as described above. The key GPC parameters are:
GPC/GPC Method/General Tab
1 Select the default detector signal to use.
2 Decide if you want to use flow rate correction.
3 If using the Universal Calibration option, define the Mark-Houwink values for the samples.
GPC/GPC Method/Column Calibration Tab
1 Select Calibration type Narrow Standard.
2 Select the curve fit to apply to the calibration data points.
3 If using the Universal Calibration option, define the Mark-Houwink values for the calibrants.
Save the processing method.
Ensure the calibrant injections to be used are linked to the GPC processing method to be calibrated.
Workflows
GPC/SEC Software for OpenLab CDS User Guide 29
Step 1b. Defining the Peak Identification Table in the Processing Method
There are two methods of defining this table.
Interactively from a set of calibrants
The method requires a set of injections of the narrow standards that are to be used under these conditions. The injections need to be either integrated using the automated integrator to identify the calibrant peaks or, defined using the manual integration tool.
For the Calibrant set:
1 Select the Chromatogram view and define the start and end of each peak and the software will determines the peak maxima of each calibrant. The peak start and end do not need to be defined exactly as it is only the retention time at the peak maximum that is required for each peak.
2 If using flow correction, ensure the expected peak maximum of the flow marker component has been defined in the GPC/General tab of the processing method.
For each calibrant:
1 Select the Peak Identification Tab in the Method View/GPC/GPC Method section.
2 Ensure the first calibrant is selected in the run list and right click in the Peak Identification Tab area.
3 Select Add peaks from chromatogram from the right click menu. The peaks identified in the injection will be added to the Peak Identification table of the processing method.
4 Assign the Mp for each peak to be used. It doesn't matter if peaks identified in the chromatogram are added to the Peak Identification table that are not from the Narrow Standards. These peaks can be either deleted from the final Peak Identification table or ignored. Any peaks in the table which have not been assigned MW value are ignored by the system when generating a GPC column calibration.
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30 GPC/SEC Software for OpenLab CDS User Guide
5 Define the Peak Identification Window. The criteria for peak identification is; The expected retention time of the peak +/- [(The Retention Time window) / 2]. The default value is 0.1 minute giving a default window of +/- 3 seconds.
6 Repeat the process for each subsequent narrow standard calibrant
Manual entry of the parameters from a set of calibrants
The method requires a predetermined table of the expected peak retention times and their associated Mp values.
For the calibrant set:
1 In the Method View, select the /GPC/GPC Method/Peak Identification Tab.
2 Enter the retention time of the peak maximum of each calibrant peak and its associated Mp value.
3 Define the Peak Identification Window. The criteria for peak identification is; The expected retention time of the peak = +/- [(Retention Time window) / 2]. The default value is 0.1 minute giving a default window of +/- 3 seconds.
Once the peak identification table has been completed, save the processing method.
If not already done so, ensure the injections are linked to the processing method.
Workflows
GPC/SEC Software for OpenLab CDS User Guide 31
Step 2a. Creating the GPC Column Calibration
Select the Injection List and ensure the ‘Sample Type’ is set to ‘Cal. Std.’ for the injections to be used to generate the GPC column calibration.
For the first of the calibrant injections to be used, ensure the ‘Run Type’ is set to ‘Clear all calibration’
In the Run List, select all the calibrants.
Select ‘Reprocess selected injections’.
Any peaks identified in each of the calibrants injections which match the peak retention time values in the Peak Identification Table are assigned with the associated Mp from the Peak Identification Table and added to the GPC column calibration.
Processing Completed
On completion of processing all ‘Cal. Std.’, the data points are added to the GPC Calibration Points table and the curve fit defined in the method applied to the data points.
The column calibration has now been created and can be reviewed.
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32 GPC/SEC Software for OpenLab CDS User Guide
Step 2b. Viewing the Generated GPC Column Calibration
The tabs in the GPC Column Calibration node of the GPC method can now be used to view the calibration.
The GPC Calibration Points Tab Displays the current column calibration data points table and
associated parameters.
The GPC Calibration Plot Tab Comprises of a read only plot of the data displayed in the GPC
Calibration Points Tab.
The GPC Calibration Details Tab Displays details about the column calibration data and how it
was derived.
Step 3c. Fine Tuning an Existing GPC Narrow Standard Column Calibration
If the generated calibration requires modification, for example,
▪ Change to the curve fit
▪ Deselection of calibration data points
▪ Addition or deletion of a data point
▪ Change to the MW of a data point
▪ Change to the Mark-Houwink K and Alpha parameters
▪ Change to the flow rate marker retention time
Any changes need to be made to the processing method and the calibrants reprocessed to regenerate the calibration using the new set of parameters.
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GPC/SEC Software for OpenLab CDS User Guide 33
2 Creating a GPC Column Calibration (Broad Hamielec)
This method requires the use of a Broad Standard of known Mn and Mw averages and generates a linear calibration. The software performs a trial and error search such that the calculated values of Mn and Mw match those documented for the Standard.
The process of creating a GPC Column Calibration using the Broad Hamielec method is a two-step process.
Step 1 – Define the Processing Method
The target MW averages (Mn and Mw), the Maximum Number of Searches and the Tolerance Value for Mn and Mw, expressed as a percentage of those Molecular Weights need to be defined in the Broad Hamielec Parameters tab of the processing method to be used.
Broad Standard Processing Method
Require a “Broad Standard”
of known peak Mw & Mn
Define:
The target MW Averages (Mn & Mw)
from the certificate of analysis of the calibrant
The Target Tolerance
The Maximum Number of search Iterations
Broad Hamielec Parameters
Stored in the processing method
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Step 2 – Process the Calibrant to generate a GPC Calibration
The Broad Hamielec Parameters are then used to create a column calibration from the calibrant.
Processing Method
Broad Hamielec Parameters
Broad Standard
Process the Calibrants
GPC Column Calibration
Plot of Log(MW) –v- Peak RT
Polynomial curve order 1 applied. (fixed)
Stored in the processing method
The process to generate a GPC column calibration using the Broad Hamielec method is described below.
Step 1a Setup the processing method
Step 1b Define the Broad Hamielec Parameters in the processing method
Step 2a Create the GPC column calibration
Step 2b View the generated GPC column calibration
Step 2c Fine tune the column calibration
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GPC/SEC Software for OpenLab CDS User Guide 35
Step 1a. Setup the GPC Processing Method for Broad Hamielec Calibration
Setup the processing options as described above. The key GPC parameters are:
GPC/GPC Method/General Tab
1 Select the default detector signal to use.
2 Decide if you want to use flow rate correction.
3 If using the Universal Calibration option, define the Mark-Houwink values for the samples.
GPC/GPC Method/Column Calibration Tab
1 Select Calibration Type Broad Hamielec.
2 If using the Universal Calibration option, define the Mark-Houwink values for the calibrant.
Step 1b. Defining the Broad Hamielec Parameters in the processing method
Select the Broad Hamielec Parameters Tab and define the following:
1 The target Mn Average & Mw Average from the certificate of analysis of the calibrant.
2 The target tolerance.
3 The maximum number of search iterations.
Save the processing method.
Ensure the calibrant injection to be used is linked to the processing method to be calibrated.
Step 2a. Creating the GPC Column Calibration
Select the Injection List and ensure the ‘Sample Type’ is set to ‘Cal. Std.’ and the ‘Run Type’ to ‘Clear all calibration’ for the injection to be used to generate the GPC column calibration.
Note:
If the Injection List was setup prior to creating the method then would not need to reprocess the calibrant. The calibrant would have been analysed and the calibration created on linking the method.
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36 GPC/SEC Software for OpenLab CDS User Guide
In the Run List, select the calibrant.
Select ‘Reprocess selected injections’.
The column calibration has now been created and can be reviewed.
Step 2b. Viewing the Generated GPC Column Calibration
The tabs in the GPC Column Calibration node of the GPC method can now be used to view the calibration. A calibration generated using the Hamielec method will consist of a straight-line fit with two data points indicating the retention time limits of the calibrant used.
The GPC Calibration Points Tab Displays the current column calibration data points table and
associated parameters.
The GPC Calibration Plot Tab Comprises of a read only plot of the data displayed in the GPC
Calibration Points Tab.
The GPC Calibration Details Tab Displays details about the column calibration data and how it
was derived.
Step 2c. Fine Tuning an Existing Broad Hamielec Column Calibration
If the generated calibration requires modification, edit the parameters in the Broad Hamielec Parameters Tab and reprocess the calibrant.
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GPC/SEC Software for OpenLab CDS User Guide 37
Creating a GPC Column Calibration (Broad Integral)
This method requires the use of a single well characterized Broad Standard, i.e. with a large dispersity value to calibrate the column set. The standard to be used must have a table detailing the % Cumulative Weight Fraction and either Log Molecular Weight or Molecular Weight values supplied by the manufacturer of the standard.
The process of creating a GPC Column Calibration using the Broad Integral method is a two-step process.
Step 1 – Define the Processing Method
Broad Standard Processing Method
Requires a characterized
“Broad Standard”
Enter the Integral table
(% Cumulative Weight Fraction and Slice Molecular
Weight) supplied on the certificate of analysis of
the calibrant
Define the curve fit to apply
Broad Integral Setup
Stored in the processing method
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Step 2 – Process the Calibrant to generate a GPC Calibration
The Broad Integral table is then used to create a column calibration from the calibrant.
Processing Method
Broad Integral Setup
Broad Standard
Process the Calibrants
GPC Column Calibration
Plot of Log(MW) –v- Peak RT
Stored in the processing method
The process to generate a GPC column calibration using the Broad Integral method is described below.
Step 1a Setup the processing method
Step 1b Define the Broad Integral table in the processing method
Step 2a Create the GPC column calibration
Step 2b View the generated GPC column calibration
Step 2c Fine tune the GPC column calibration
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GPC/SEC Software for OpenLab CDS User Guide 39
Step 1a. Setting up the Processing Method for Broad Integral Calibration
Setup the processing options as described above. The key GPC parameters are:
GPC/GPC Method/General Tab
1 Select the default detector signal to use.
2 Decide if you want to use flow rate correction.
3 If using the Universal Calibration option, define the Mark-Houwink values for the samples.
GPC/GPC Method/Column Calibration Tab
1 Select Calibration Type Broad Integral. The “Polynomial curve fit” parameter is displayed and the "Broad Integral Setup Tab" is displayed.
2 Select the default curve fit to apply to the calibration data points.
3 If using the Universal Calibration option, define the Mark-Houwink values for the calibrant.
Step 1b. Broad Integral Setup Tab
This tab consists of a grid containing Slice Mp (g/mol), Percentage Weight data pairs.
Enter the Integral table (% Cumulative Weight Fraction and Slice Molecular Weight) supplied on the certificate of analysis for the calibrant. If the integral table is available as a text file with the format:
<Slice MW value 01 <tab> <Percentage Weight value 01>
<Slice MW value 02 <tab> <Percentage Weight value 02>
…
<Slice MW value N <tab> <Percentage Weight value N>
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This text file can be copied to the Windows clipboard and using the Paste option available in the Right Click menu of the Broad Integral Setup grid, pasted into the table below the current last row of the table. Any rows without the tab separator are ignored. Alternatively, the data table can be entered manually by using the Add broad integral option available on the right click menu. Options are available in the right click menu of the Broad Integral Setup grid which allow rows to be added and deleted.
Save the processing method.
Ensure the calibrant injection to be used is linked to the processing method to be calibrated.
Step 2a. Creating the GPC Column Calibration
Select the Injection List and ensure the ‘Sample Type’ is set to ‘Cal. Std.’ and the ‘Run Type’ to ‘Clear all calibration’ for the injection to be used to generate the GPC column calibration.
In the Run List, select the calibrant.
Select ‘Reprocess selected injections’.
NOTE:
If the Injection List was setup prior to creating the method then would not need to reprocess the calibrant. The calibrant would have been analysed and the calibration created on linking the method.
The column calibration has now been created and can be reviewed.
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GPC/SEC Software for OpenLab CDS User Guide 41
Step 2b. Viewing the Generated GPC Column Calibration
The tabs in the GPC Column Calibration node of the GPC method can now be used to view the calibration.
The GPC Calibration Points Tab Displays the current column calibration data points table and
associated parameters.
The GPC Calibration Plot Tab Comprises of a read only plot of the data displayed in the GPC
Calibration Points Tab.
The GPC Calibration Details Tab Displays details about the column calibration data and how it
was derived.
Step 2c. Fine tuning an Existing Broad Integral Column Calibration
If the generated calibration requires modification, for example,
▪ Change to the curve fit
▪ Deselection of calibration data points
▪ Addition or deletion of a data point
▪ Change to the MW of a data point
▪ Change to the Mark-Houwink K & Alpha parameters
▪ Change to the flow rate marker retention time
Any changes need to be made to the processing method and the calibrants reprocessed to regenerate the calibration using the new set of parameters.
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Processing a Sample Injection
Once a GPC processing method has been calibrated, injections can be processed using this method. The procedure to process a sample injection is the same regardless of the method of calibrating the system.
Sample GPC/SEC Results
The ‘Molecular Weight Averages’
Number Average (Mn), Weight Average (Mw), Mz,
Mz+1
+ Polydispersity (Mn/Mw)
+
The ‘Molecular Weight Distribution Plot’
The ‘Cumulative Plot’
Optional
The % of the sample peak within defined MW
limits
The MW at specific % peak fractions
Each injection can be processed in turn or, all injections in a sequence can be processed automatically.
The procedure to process an injection is described below.
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GPC/SEC Software for OpenLab CDS User Guide 43
Setting up the GPC Processing Method
NOTE The GPC processing method needs to be fully defined before calibrating the processing
method, as any change to the processing method after generating of a GPC column
calibration will make the calibration inconsistent with the processing method, the
calibration will need to be recreated and any processed injections will be marked as
inconsistent.
The key GPC parameters are:
GPC/GPC Method/General Tab
1 Select the detector signal to use.
2 Decide if you want to use flow rate correction.
3 If using the Universal Calibration option, ensure the Mark-Houwink values for the samples have been defined.
Parameters
Optional GPC/GPC Method/MW Ranges & Percentage Tabs
If this information is required, ensure the parameters have been defined and the options switched on.
‘Sample Type’
Select the Injection List and ensure the ‘Sample Type’ is set to ‘Sample’ for the injections to be processed.
Process the Injection
In the Run List, select the injection to be processed.
Select ‘Reprocess selected injections’.
The GPC/SEC results are calculated for each integrated peak in the defined signal of the selected injection.
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Viewing the GPC Results
The results for the processed injection are available in the GPC specific views which are accessed from the Results Layout View. The GPC specific views comprise of:
▪ The GPC Results View
▪ The GPC Distributions Plot View
▪ The GPC Calibration Plot View
The GPC Results View
This view comprises of the following tabs:
The Peak Results Tab Consists of a grid containing the calculated MW Averages for
each integrated peak in the selected processed Injection.
The GPC Column Calibration Tab Displays the column calibration used to process the selected
injection. The content is the same as the GPC Column Calibration
Details tab accessed from the processing method.
The MW Ranges Tab Displays the MW Ranges calculated from each integrated peak in
the selected processed injection. It is only populated if the GPC
MW Ranges option is switched on in the processing method.
The Percentage Fractions Tab Displays the MW at the specific % fractions defined in the
method from each integrated peak in the selected processed
injection. It is only populated if the GPC Percentage Fractions
option is switched on in the processing method.
The GPC Distributions Plot View
The GPC Distribution Window displays the MW distribution plot(s) and optional cumulative plot(s) for the selected injection. If the processed injection contains more than one processed peak, all the distribution plots are displayed on the same axes.
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GPC/SEC Software for OpenLab CDS User Guide 45
The GPC Calibrations Plot View
The GPC Calibrations Window displays the GPC column calibration used to process the injection.
Peak Integration limits
The peak integration limits for an injection can be modified using the Manual integrator tool option available in the Chromatograms window.
Modifying the integration limits of a peak will automatically reprocess the sample.
At the end of the analysis process Save All Results by clicking on the Save All Results Icon, located in the Processing Toolbar via the Home or Processing Tabs.
This is good practice before closing the result set and project.
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Reviewing Data & Results
The results of processed samples in a result set can be viewed at any time.
Results from an injection
Select the Results Layout Tab and select the processed injection in the run list.
The results of a processed sample can be accessed from the various GPC windows and tabs.
▪ The GPC Results View
▪ The GPC Distributions View
▪ The GPC Calibration Plot View
Selecting another sample injection in the run list will update the display with the results from that sample.
Results from a series of injections
The results of a series of process injections can be reviewed and overlaid. The key to reviewing results is the use of the Pin function and the concept of the focused injection (The current selected injection, if a series of injections are selected)
Select the injections to be compared using the Pin function. (The processed injections can be from the same or different results sets.). The selected injections and results are now displayed in the various results windows.
The Chromatograms view
The selected signals of the pinned injections are displayed in the Chromatograms View.
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GPC/SEC Software for OpenLab CDS User Guide 47
The GPC Results View
The GPC Results Window displays the calculated MW Averages and related results for all the selected injections.
The Peak Results Tab Displays the calculated MW Averages and related parameters
for each peak in each pinned injection.
The GPC Column Calibration Tab Displays the GPC calibration parameters used to process the
focused injection.
The MW Ranges Tab Displays the MW Ranges calculated from each integrated peak
in the pinned injections. It is only populated if the GPC MW
Ranges option is switched on in the processing method.
The Percentage Fractions Tab Displays the MW at the specific % fractions defined in the
method from each integrated peak in the pinned injections. It is
only populated if the GPC Percentage Fractions option is
switched on in the processing method.
The GPC Distributions Window
The Distribution Plot Tab displays the MW distribution plot(s) and optional cumulative plot(s) for each integrated peak in the selected injection. The distribution plots of all injections are displayed on the same Log MW axis.
The GPC Calibrations Plot View
The GPC Calibrations Window displays the GPC column calibrations used to process the pinned injections.
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The GPC Column Calibration used to process a sample
The GPC column calibration used to process a sample injection is stored within the sample injection results.
Display the Results Layout View and select the processed injection in the run list.
The column calibration details used to process the selected injection can be accessed from the GPC Column Calibration Tab in the GPC Results View.
A plot of the GPC column calibration can be accessed from the GPC Calibrations Plot View.
Current Column Calibration of a Processing Method
The Current GPC column calibration of a processing method can be viewed from the GPC/GPC Column Calibration section of the processing method.
The GPC Calibration Points Tab Displays the current column calibration data points table
and associated parameters.
The GPC Calibration Plot Tab Comprises of a read only plot of the data displayed in
the GPC Calibration Points Tab.
The GPC Calibration Details Tab Displays details about the column calibration data and how it
was derived.
The GPC/SEC Processing Method
GPC/SEC Software for OpenLab CDS User Guide 49
5. The GPC/SEC Processing Method
This section describes:
▪ The GPC specific additions to the processing method
▪ The GPC parameters and their function
The GPC/SEC software provides a "GPC Specific" processing method type based on the method type ‘GC/LC Area Percent’ and supports:
▪ Integration and Area% / Height% calculation
▪ Signal alignment
▪ Blank subtraction for GC, LC, A/D data
▪ System suitability
▪ GPC column calibration
▪ Calculation of molecular weight averages & distribution plot
▪ Calculation of % Material within specific MW ranges
▪ Calculation of Mw information at specific % Fractions
▪ Custom calculation
▪ Reporting
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The GPC parameters are accessed from the GPC section of the processing method which is added to the bottom of the processing method section. The parameters are displayed in two sub sections:
1 GPC/GPC Method
2 GPC/GPC Column Calibration
All GPC parameters are stored as part of the Data Analysis processing method.
The GPC Method Section
This section provides access to GPC specific parameters for:
1 Generating a GPC column calibration
2 Processing an injection using a GPC column calibration
The GPC parameters are accessed via a series of tabs. The tabs that are displayed depend on the ‘Column Calibration type’ selected in the ‘Column Calibration’ tab.
Tab Comments
General
These tabs are common for all GPC column calibration types. Column Calibration
MW Ranges
Percentage Fractions
Peak Identification This tab is only displayed when Narrow Standard column
calibration type is selected.
Broad Hamielec Parameters This tab is only displayed when Broad Hamielec column calibration
type is selected.
Broad Integral Setup This tab is only displayed when Broad Integral column calibration
type is selected.
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The General Tab Parameters
The parameters on the General tab are:
▪ Signal
▪ Flow Rate Correction
▪ Use flow rate correction check box
▪ FRM name
▪ Expected RT
▪ RT window
▪ Sample Mark-Houwink Parameters
▪ K((10e-5) dL/g)
▪ alpha
General/Signal
This parameter is used to identify the chromatogram detector signal to be used when processing an injection. The drop-down menu displays a list of the detector signals available in the currently selected injection/results set. When the Process / Reprocess Injections option is used, the selected signal in the injection is processed. How the injection is processed is dependent on the Sample Type defined in the Injection List as follows.
Sample type Action
‘Cal. Std’ When the defined ‘detector signal’ exists in the injection, the injection is used to
create / update a GPC column calibration.
‘Sample’ &
others types
When the defined ‘detector signal’ exists in the injection, the injection is processed
using the GPC calibration associated with the processing method (when it exists).
In both cases, when the defined ‘detector signal’ does not exist in the injection, the
injection is ignored.
Flow Rate Correction/Flow Rate Marker Name
This option provides the ability to enter the name of the component used in the sample injections for the flow marker indicator.
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Flow Rate Correction/Expected RT
This parameter defines the expected peak retention time of the “flow rate marker peak”. It is used in conjunction with the RT window to identify the flow rate marker component in an injection. When using the flow rate correction option, the following two parameters need to be defined.
Flow Rate Correction/RT window
This parameter defines the Retention Time search window to identify the flow rate marker peak in an injection. The system will attempt to identify a peak in an injection sample which is +/- [(Retention Time window) / 2] minutes of the Expected Retention Time value for the flow marker stored in the processing method being used. The default value is 1.000 minutes (+/- 30 second window.)
Sample Mark-Houwink Parameters
The Universal Calibration method can be used to account for different polymer types between the calibrant(s) used to generate a GPC column calibration and the polymer samples to be evaluated. These constants vary with polymers type, solvent and temperature. Tables listing these constants for a wide variety of polymers in different solvents are available in literature.
Parameter Description
K The value of K that will be used in the GPC calculations when processing a sample.
Minimum value 0.01 Maximum value 9999.999
Default value 14.100 Units (10e-5) dL/g
Alpha The value of Alpha that will be used in the GPC calculations when processing a sample.
Minimum value 0.001 Maximum value 10.000
Default value 0.700 Units none
The default values provided are for Polystyrene in THF at ambient temperature. The Mark-Houwink constants for the calibrants are defined in the Column Calibration tab.
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The Column Calibration Tab Parameters
The parameters on the Column Calibration Tab are:
1 Column Calibration Type
2 Cal. Std. Mark-Houwink Parameters
Column
Calibration Type Description
Narrow Standard Require a series of Narrow Standards of known Mp.
When this option is selected:
The “Polynomial curve fit” parameter is enabled
The "Peak Identification Tab" is displayed
Broad Hamielec This method utilizes a Broad Standard with known Mn and Mw and assumes
that the calibration to be generated is linear. The software performs a trial and
error search such that the calculated values of Mn and Mw match those
documented for the Standard. The Maximum Number of Searches, and Tolerance
Value for Mn and Mw, expressed as a percentage of those Molecular Weights
need to be defined in the processing method to be used.
When this option is selected:
The "Broad Hamielec Parameters Tab" is displayed
Broad Integral This method requires a characterized Standard with known MW at specific Wt%.
A Broad Standard calibration involves the use of a single well characterized
Broad Standard, i.e. with a large dispersity value to calibrate the column set. The
standard to be used must have a table detailing the % Cumulative Weight
Fraction and either Log Molecular Weight or Molecular Weight values supplied
by the manufacturer of the standard.
When this option is selected:
The “Polynomial curve fit” parameter is displayed with values 1 to 5
enabled.
The "Broad Integral Setup Tab” is displayed
Polynomial curve fit
This parameter defines the type of curve fit (1st order to 5th order) that will be applied to a new column calibration using the Narrow Standard or Broad Integral method. For a Hamielec calibration, a 1st order polynomial is automatically applied and cannot be changed.
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Cal. Std. Mark-Houwink Parameters
The Universal Calibration method can be applied to account for different polymer types between the calibrant(s) used to generate a GPC column calibration and the polymer samples to be evaluated. This method requires Mark-Houwink constants, K and α (Alpha) values to be the same for both calibrants and sample polymer types. These constants vary with polymers type, solvent and temperature. Tables listing these constants for a wide variety of polymers in different solvents are available in literature.
Parameter Description
K The value of K that will be used when generating a GPC column calibration.
Minimum value 0.01 Maximum value 9999.999
Default value 14.100 Units (10e-5) dL/g
Alpha The value of Alpha that will be used when generating a GPC column calibration.
Minimum value 0.001 Maximum value 10.000
Default value 0.700 Units none
The default values provided are for Polystyrene in THF at ambient temperature. The Mark-Houwink constants for the samples are defined on the General tab.
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The Peak Identification Tab
This tab is only displayed when the Column calibration type in the Column Calibration tab is set to “Narrow Standard”.
This tab is used to define a set of Peak Retention times versus MW values for the peaks of the narrow standard calibrants to be used to generate a GPC column calibration. This tab consists of a grid containing the following parameters.
Parameter Description
RT (min) The expected peak retention time of a calibrant peak
MW (g/mol) The MW to be assigned to the calibrant peak
Peak RT window (min) The retention time search window to identify the calibrant peak (+/-
[(Retention Time window) / 2. The default value is 0.1 mins (+/- 3 seconds)
Sample name The name of the injection from which the data point has been added.
Signal The detector signal name of the injection from which the data point has been
added
Source chromatogram The source chromatogram of the injection from which the data point has
been added.
Source chromatogram
data sequence
The data sequence containing the source chromatogram.
Source chromatogram
project
The name of the project containing the source chromatogram data sequence.
Use point Defines if the point is to be included in the calculation of the line of fit of the
GPC calibration
The options available are:
▪ Automatic entry of peak retention time from actual calibrant injections and subsequent manual entry of the associated MW values.
▪ Manual entry of the expected retention time, retention time window and associated MW value of the calibrants.
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Right Click menu options
Options “Choose columns…”, “Numeric precision…”, “Copy to clipboard” and “Export
to file…”
The following GPC specific items are available on the right click menu of the Peak Identification Table:
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Command Description
Add peaks from
chromatogram
Adds the peaks currently identified in the selected injection to the Peak
Identification table populating the parameters in the table.
The MW for each peak is assigned as 0 by default.
Add peak A calibration point can be defined manually by adding a row to the Peak
Identification table. The Peak Retention Time and MW parameters are set to
0.
The following parameters can be defined for a row:
Peak Retention Time
MW
Peak Retention Time window
Use point
Delete selected
peak(s)
Deletes the currently selected row or rows in the table.
The Broad Hamielec Parameters Tab
This tab is only displayed when the Column calibration type in the Column Calibration tab is set to “Broad Hamielec".
This method utilizes a Broad Standard with known Mn and Mw. The Hamielec method assumes that the calibration to be generated is linear. The software performs a trial and error search such that the calculated values of Mn and Mw match the target values documented for the Standard. The Maximum Number of Iterations together with a Target Tolerance Value for Mn and Mw, expressed as a percentage of those Molecular Weights need to be defined in the Processing method to be used. This tab is used to define the Hamielec MW and Search Parameters and consists of:
Parameter Description
Target Mn Average Target Mn Average of the calibrant injection to be used
Target Mw Average Target Mw Average of the calibrant injection to be used
Target tolerance The target tolerance expressed as a percentage of the known Molecular
Weights
Minimum value 0.01 Maximum value 100.00
Default value 5.00 Units %
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Maximum Number
of Iterations
The maximum number of iterations to use in the search process to determine
the best calibration line to achieve the target Mn & Mw values within the
defined target tolerance.
Minimum value 1 Maximum value 99999
Default value 5 Units n/a
If the target molecular weight or tolerance are not achieved, the calibration is still generated but a warning message will be displayed to indicate the calculation process has been terminated. The calibration that is created is identified with two data points to indicate the retention time limits of the calibrant used, it can be reviewed in the Column Calibration View.
The Broad Integral Setup Tab
This tab is only displayed when the Column calibration type in the Column Calibration tab is set to “Broad Integral”.
This method requires a broad standard that has been characterised with a minimum number of 5 fractions to generate a cumulative molecular weight table. This tab is used to define the Integral table detailing the % Cumulative Weight Fraction and either Log Molecular Weight or Molecular Weight values supplied by the manufacturer of the standard. This tab consists of a grid containing Slice MW (g/mol), Percentage Weight data pairs.
Parameter Description
Percentage Weight Defines the percentage weight fraction of the MW slice
Minimum value 0.0000 Maximum value 99.999
Default value 0.0000 Units %
Slice MW (g/mol) The MW for the corresponding percentage weight fraction.
Minimum value 0 Maximum value 99,999,999
Default value 0 Units g/mol
Right Click menu options
Options “Choose columns…”, “Numeric precision…”, “Copy to clipboard” and “Export
to file…”
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The following GPC specific items are available on the right click menu:
Command Description
Paste Pastes the contents of the clipboard into the table below the current last row of
the table. The contents of the clipboard must have the format:
<Slice MW value 01 <tab> <Percentage Weight value 01>
<Slice MW value 02 <tab> <Percentage Weight value 02>
…
<Slice MW value N <tab> <Percentage Weight value N>
Any rows without the tab separator are ignored.
Add broad integral Adds a row to the bottom of the existing table with the default values for the
Slice MW & Percentage weight fraction.
Delete selected
broad integral(s)
Deletes the currently selected row(s) from the table.
(No confirmation dialog is displayed).
The MW Ranges Tab
This option allows the calculation of the % of material within specific MW ranges when performing a MW distribution calculation. Any number of MW Ranges can be defined in this dialog. The results are provided in the MW Ranges tab of the GPC Results View accessed from within the Results Tab.
Parameter Description
MW Ranges
Checkbox
Provides the ability to enable/disable the calculation of the defined MW
Ranges when processing Injections. The Ranges can be defined/edited even if
the checkbox is unchecked.
High MW limit
(g/mol)
This is the high molecular weight limit of the MW range to be calculated.
The value "M+" can be used to define the Maximum Molecular Weight of an
injection.
Low MW limit
(g/mol)
This is the low molecular weight limit of the MW range to be calculated.
The value "M-" can be used to define the Minimum Molecular Weight of an
injection.
MW Range Name An optional text label that provides a way to identify specific MW ranges in a
report.
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If the entered low limit is greater than the entered high limit, then the following error message is displayed. “Error. The low limit MW value must be less than the high limit MW value” The previous value is restored after clicking OK.
If the entered high limit is greater than the entered low limit, then the following error dialog is displayed. “Error. The high limit MW value must be greater than the low limit MW value”. The previous value is restored after clicking OK
Right Click Menu Options
The following GPC specific items are available on the right click menu:
Command Description
Copy to Clipboard Copies the whole table with headers to the clipboard as tab separated text.
Example of contents:
High MW limit (g/mol)
M+
100000
Low MW limit (g/mol)
100000
1000
Add MW Range Adds a row to the bottom of the current table with the values set to the
default values M+ to M-.
Delete selected MW
range(s)
Deletes the currently selected row(s) from the table.
The Percentages Fractions Tab
This option allows the calculation of the molecular weights at specific percentage area fractions of an injection peak. E.g. Calculate the molecular weights at the first 10% of the peak area and at the last 10% of the peak area. Any number of fractions can be defined. The High Fraction & Low Fraction % values do not need to be the same values. The results are provided in the Percentage Fractions Tab of the GPC Results View accessed from within the Results Tab.
Parameter Description
Calculate
percentage fractions
Provides the ability to enable/disable the calculation of the percentage
fractions when processing Injections. The fraction ranges can be defined/edited
even if the checkbox is unchecked.
The GPC/SEC Processing Method
GPC/SEC Software for OpenLab CDS User Guide 61
High fraction % The percentage fraction from the peak start retention time at which to calculate
the molecular weights for:
Minimum value 0.0 Maximum value 99.9
Default value 0.0 Units %
Low fraction % The percentage fraction from the peak end retention time at which to calculate
the molecular weights for.
Minimum value 0.0 Maximum value 99.9
Default value 0.0 Units %
Right Click Menu Options
The following GPC specific items are available on the Right Click menu:
Command Description
Copy to Clipboard Copies the whole table with headers to the clipboard as tab separated text.
Example of contents.
High fraction % Low fraction %
10.0 10.0
5.0 20.0
Add fraction Adds a row to the bottom of the current table with the values set to the
default values 0.0 to 0.0.
Delete selected
fraction(s)
Deletes the currently selected row(s) from the table.
The GPC/SEC Processing Method
62 GPC/SEC Software for OpenLab CDS User Guide
The GPC Column Calibration Section
This section provides access to the GPC calibration associated with the processing method. The GPC column calibration parameters are accessed via three tabs:
1 GPC Calibration Points tab
2 GPC Calibration Plot tab
3 GPC Calibration Details tab
The GPC Calibration Points Tab
The contents of this tab comprise of a read only grid which displays the current Calibration Data Points Table and associated parameters. The content of this grid is the same for all three GPC calibration types.
Parameter Description
Assigned MW (g/mol) Narrow
Standard
The MW value corresponding to the RT value of the peak
nearest to the entry in the Peak Identification table.
Hamielec The MW value corresponding to the start and end points
of the calculated line of fit.
Integral The Slice Mp for the individual fractions.
FRM RT (min) The retention time of the flow marker identified in the Injection. When the
flow rate correction option is not selected then 0.000 is displayed.
log MW The log value of the assigned MW value.
Percent error The percentage error of the data point derived from the line of best fit being
applied.
Predicted MW (g/mol) The calculated MW from the line of best fit at the Retention Time of the data
point.
Residual The residual error of the data point derived from the line of best fit being
applied.
RT actual (min) The actual Retention Time of the peak in the calibrants injection.
RT corrected (min) The flow rate corrected Retention Time of the peak in the calibrants injection.
When the flow rate correction option is not selected then this value is the
same as the RT actual.
Sample name The sample name of the injection from which the calibrant data point was
obtained.
The GPC/SEC Processing Method
GPC/SEC Software for OpenLab CDS User Guide 63
Signal The signal used in the injection from which the calibrant data point was
obtained.
Source chromatogram The source chromatogram of the injection from which the data point has
been added.
Source chromatogram
data sequence
The data sequence containing the source chromatogram.
Source chromatogram
project
The name of the project containing the source chromatogram data sequence.
The GPC Calibration Plot Tab
This tab comprises of a read only plot of the data displayed in the GPC Calibration Points tab.
Plot Contents Log MW -v- RT corrected (min)
The data points are displayed as blue circles
The calculated line of fit is displayed in red
Y Axis scale Log X Axis scale Linear
Y Axis title MW (g/mol) X Axis title Retention time (min)
Y Axis units g/mol X Axis units Minutes
Legend Displays the name of the processing method
Functions available
The following GPC/SEC specific items are available:
Command Description
Expand/Collapse Each of the sections can be collapsed or expanded.
Tooltip When the mouse cursor is over a data point in the calibration plot, a tool tip
displays the following information:
• The retention time (min) of the data point.
• The MW (g/mol) assigned to the data point.
• The sample name of the source chromatogram.
• The filename of the source chromatogram.
The values are taken from the current GPC column calibration displayed in the
GPC Calibration Points tab of the method.
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64 GPC/SEC Software for OpenLab CDS User Guide
Right Click menu
Auto Scale Autoscales the plot.
Copy to clipboard Clipboard as a tab separated text.
Export to file Saves the displayed information AND the calibration data points table to the
file.
The GPC Calibration Details Tab
This tab displays details about the column calibration data and how it was derived. The content depends on the GPC calibration type.
Functions available
The following GPC specific items are available:
Command Description
Expand / Collapse Each of the sections can be collapsed or expanded.
Right Click menu
Copy to Clipboard Copies the displayed information AND the calibration data points table to the
Clipboard as a tab separated text.
Export to file… Saves the displayed information AND the calibration data points table to the
file.
The GPC Results View
GPC/SEC Software for OpenLab CDS User Guide 65
6. The GPC Results View
The GPC Results view is accessed from the Results Tab and comprises of the following tabs:
1 Peak Results
2 GPC Column Calibration
3 MW Ranges
4 Percentage Fractions
The Peak Results Tab
This tab consists of a grid containing the calculated MW Averages of the selected processed injection(s).
Parameter Description
Alpha The sample Mark-Houwink alpha value.
Data file The filename of the processed injection.
FRCF The flow rate correction factor applied to the processed injection. When the flow
rate correction option is not selected then 1.000 is displayed.
FRM name The flow rate marker name as defined in the processing method being used. When
the flow rate correction option is not selected then this field is blank.
FRM RT (min) The flow rate marker peak retention time (in minutes) of the processed injection.
When the flow rate correction option is not selected then 0.000 is displayed.
K ((10e-5) dL/g) The sample Mark-Houwink K value.
Method The name of the processing method used.
The GPC Results View
66 GPC/SEC Software for OpenLab CDS User Guide
Mn (g/mol) The calculated Number Average (Mn) of the processed peak.
Mp (g/mol) The calculated Peak MW of the processed peak.
Mv (g/mol) The calculated Viscosity Average (Mv) of the processed peak.
Mw (g/mol) The calculated Weight Average (Mw) of the processed peak.
Mz (g/mol) The calculated Mz of the processed peak.
Mz+1 (g/mol) The calculated Mz+1 of the processed peak.
PD The calculated polydispersity (Mw/Mn) of the processed peak.
Peak # The peak number in the injection
Results Set The name of the results set containing the injection.
RT (min) The peak retention time (in minutes) of the processed peak.
Sample name The injection name.
Signal description The processed detector signal of the injection.
Functions available
▪ Order on the active column
▪ Re size the displayed columns
▪ Re order the displayed columns
The following GPC specific items are available on the right click menu:
Command Description
Choose columns … Displays the Choose Columns dialog.
Numeric precision … if relevant, displays the Numeric Precision dialog.
Copy to Clipboard Copies the displayed information and the calibration data points table to the
clipboard as a tab separated text.
Export to file… Saves the displayed information and the calibration data points table to the
file.
The GPC Results View
GPC/SEC Software for OpenLab CDS User Guide 67
The GPC Column Calibration Tab
This tab displays details about the GPC calibration used and how it was derived.
Functions available
The following GPC specific items are available on the right click menu:
Command Description
Copy to Clipboard Copies the displayed information and the calibration data points table to the
clipboard as a tab separated text.
Export to file… Saves the displayed information and the calibration data points table to the file.
The MW Ranges Tab
This tab displays a table which contains a row for each MW Range defined in the method for each peak in the processed injection.
Parameter Description
Data file The filename of the processed injection.
High limit MW (g/mol) The actual high limit value used for the processed peak.
Low limit MW (g/mol) The actual value of the low limit in the MW Ranges table in the
processing method.
Method The name of the processing method used.
Method high limit MW (g/mol) The high limit value in the MW Ranges table in the processing
method used.
Method low limit MW (g/mol) The value of the low limit in the MW Ranges table in the processing
method.
Peak # The peak number in the injection
Percent MW The calculated percentage of the injection of the MW range % .
Results Set The name of the results set containing the injection.
Sample name The name of the injection.
Signal description The processed detector signal of the injection.
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68 GPC/SEC Software for OpenLab CDS User Guide
MW Range Name The optional text label defined for a MW Range in the processing
method.
Functions available
▪ Order on the active column
▪ Re size the displayed columns
▪ Re order the displayed columns
The following GPC specific items are available on the right click menu:
Command Description
Choose columns … Displays the Choose Columns dialog.
Numeric precision … if relevant, displays the Numeric Precision dialog.
Copy to Clipboard Copies the displayed information and the calibration data points table to the
clipboard as a tab separated text.
Export to file… Saves the displayed information and the calibration data points table to the
file.
The Percentage Fractions Tab
This tab displays a table which contains a row for each Percentage Fraction defined in the method for each peak in the processed injection.
Parameter Description
Peak # The peak number in the injection
Method The name of the processing method used.
MW at high fraction (g/mol) The actual slice MW at the retention time of the high fraction
percentage specified in the method.
MW at low fraction (g/mol) The slice MW at the retention time of the low fraction percentage
specified in the method.
High fraction Mn (g/mol) The calculated Mn average for the high fraction percentage specified
in the method.
High fraction Mw (g/mol) The calculated Mw average for the high fraction percentage specified
in the method.
High fraction percent The high fraction percentage specified in the method.
The GPC Results View
GPC/SEC Software for OpenLab CDS User Guide 69
High fraction RT (min) The actual retention time of the high fraction percentage specified in
the method.
Low fraction Mn (g/mol) The calculated Mn average for the low fraction percentage specified in
the method.
Low fraction Mw (g/mol) The calculated Mw average for the low fraction percentage specified in
the method.
Low fraction percent The low fraction percentage specified in the method.
Low fraction RT (min) The actual retention time at the low fraction percentage specified in
the method.
Data file The filename of the processed injection.
Results Set The name of the results set containing the injection.
Sample name The name of the injection.
Signal description The processed signal of the injection.
Functions available
▪ Order on the active column
▪ Re size the displayed columns
▪ Re order the displayed columns
The following GPC specific items are available on the right click menu:
Command Description
Choose columns … Displays the Choose Columns dialog.
Numeric precision … if relevant, displays the Numeric Precision dialog.
Copy to Clipboard Copies the displayed information and the calibration data points table to the
clipboard as a tab separated text.
Export to file… Saves the displayed information and the calibration data points table to the
file.
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The GPC Distributions View
GPC/SEC Software for OpenLab CDS User Guide 71
7. The GPC Distributions View
The GPC Distributions view is accessed from the Results Tab and comprises of a read only plot of the GPC molecular weight distribution plot(s) for the selected processed injection(s).
If the processed injection contains more than one processed peak, all distribution plots are displayed in the same color on the same plot.
If more than one processed injection is selected, the distribution plots of all injections are displayed on the same plot. The processed injections can be from the same or different results sets.
Content
Plot Contents Plot of dw/dlogM -v- Log MW
The Cumulative Ht (%) is plotted on the 2nd Y axis
This plot can be selected by the button on the plot window
The color of the plot is linked to the color of the source injection
Y1 Axis scale Linear Y1 Axis units Y1 Axis title dw/dLogM
Y2 Axis scale Linear Y2 Axis units Y2 Axis title Ht (%)
X Axis scale Log X Axis units 1 ex X Axis title Fitted MW (g/mol)
Legend Displays the injection name and filename of the source injection(s)
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72 GPC/SEC Software for OpenLab CDS User Guide
Functions available
The following GPC specific items are available:
Button Function
Display the Distribution plot(s).
Display the Distribution plot(s) and associated cumulative plot(s).
Auto scales the plot.
Command Description
Zoom The ability to zoom in on the graph by drawing a box using the mouse
cursor.
Right Click menu options
Auto Scale Autoscales the plot
Copy to clipboard Copies the plot as EMF (vector) format.
Export to file Displays the standard OpenLab ‘Save As’ dialog.
The GPC Calibrations Plot View
GPC/SEC Software for OpenLab CDS User Guide 73
8. The GPC Calibrations Plot View
The GPC Calibration Plot view is accessed from the Results Tab and comprises of a read only plot of the column calibration plot(s) for the selected processed injection(s).
If more than one processed injection is selected, the column calibration plot(s) are overlaid on the same plot.
The processed injections can be from the same or different results sets.
Content
Plot Contents Plot of Log MW -v- RT corrected (min)
Which contains the data points and calculated line of fit
The color of the line is linked to the color of the source injection
Y Axis scale Log MW Y Axis units 1 ex Y Axis title MW (g/mol)
X Axis scale Linear X Axis units Minutes X Axis title Retention time (min)
Legend Displays the sample name and filename of the injection analysed by the calibration.
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74 GPC/SEC Software for OpenLab CDS User Guide
Functions available
The following GPC specific items are available:
Command Description
Zoom The ability to zoom in on the graph by drawing a box using the mouse
cursor.
Tooltip When the mouse cursor is over a data point in the calibration plot, a tool
tip displays the following information:
• The retention time (min) of the data point.
• The MW (g/mol) assigned to the data point.
• The sample name of the source chromatogram.
• The filename of the source chromatogram.
The values are taken from the GPC column calibration used to process the
sample of the selected (active) injection.
The ‘Retention Time’ value displayed is the value displayed in the ‘RT
corrected’ column of the GPC Calibration Points tab of the method.
Right Click menu options
Auto Scale Autoscales the plot
Copy to clipboard Copies the plot as EMF (vector) format.
Export to file Displays the standard OpenLab ‘Save As’ dialog.
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GPC/SEC Software for OpenLab CDS User Guide 75
9. Reporting
The OpenLab Reporting tool can be used to generate reports and also define and modify your own report templates. It is accessed from the Reporting navigation option.
Familiarization with Reporting
Full information about the features and options available are described in the OpenLab Help & Learning tool.
Home > How To > Reporting
The section covers:
▪ Viewing existing reports
▪ Creating injection reports manually in Data Analysis
▪ Creating injection reports automatically after acquisition
▪ Creating a result set summary report
▪ Previewing a new report
▪ Printing a report from the preview
▪ Saving a report from the preview
▪ Specifying PDF options
▪ Selecting a printer
▪ Specifying a fixed scaling for reports
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76 GPC/SEC Software for OpenLab CDS User Guide
Report Types and Generation of Reports
There are three main report types available:
▪ Single Injection
▪ Single Sequence Summary
▪ Cross Sequence Summary
Single injection reports can be generated:
▪ Unattended, by define reporting in the acquisition method
▪ Automatically, by define reporting in processing method
▪ Manually, using the Reporting View
Sequence Summary and Cross Sequence Summary reports are generated interactively from within the Reporting View. The following section provides a summary of the interaction between report types, report items and the injections selected.
Using a Single Injection Report Type
Single Injection Selected
This will produce a single
report for the selected
injection
Series of Injections selected in a single sequence.
This will produce a separate
report for each of the
selected injections
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GPC/SEC Software for OpenLab CDS User Guide 77
Using a Single Sequence Summary Report Type
Series of injections selected in a single sequence.
This will produce a single
report with each of the
selected injections overlaid
and combined into one report.
Series of Selected Injections Across Sequences
This will produce a separate
report for each of the
sequences combining the
selected injections per
sequence.
Using a Cross Sequence Summary Report Type
Series of Injections selected Across Sequences
This will produce a single
report with all selected
injections from all sequences
overlaid and combined in one
report.
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78 GPC/SEC Software for OpenLab CDS User Guide
Reports Items
The GPC/SEC software provides GPC Specific report items that comprise of a series of GPC specific tables and plots which can be included into the standard OpenLab reports. These are described in the next section.
Example GPC & SEC Report Templates.
Two sets of default report templates are supplied, one set for typical GPC applications and the second for SEC applications.
Further information on the names and content of the supplied reports is provided in the Appendix.
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GPC/SEC Software for OpenLab CDS User Guide 79
GPC additions to the OpenLab Reporting module
The following section describes the GPC additions to the OpenLab Reporting module.
▪ Additions to existing report Items
▪ Addition of GPC specific report items
▪ GPC column calibration specific items
▪ GPC analysis specific items
Additions to Existing Report Items
The following report items are updated to provide ‘GPC’ specific information to the following ‘Data Analysis Method Information’ report items:
Data Analysis Method Information Multi Column
Single Data Analysis Method Parameter
Single Data Analysis Method Table Row
The Data Analysis Method Information Multi Column Item
The following GPC specific parameters are output at the end of the Data Analysis method report.
GPC Method Parameters
MW Ranges Table
Percentage Fractions Table
GPC Column Calibration
GPC Calibration Data Points Table
Peak Identification Table (Narrow Standard calibration)
Broad Hamielec Parameters (Broad Hamielec calibration)
Broad Integrals Table (Broad Integral calibration)
The Single Data Analysis Method Parameter Item
This report item allows the selection of a single parameter for display.
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80 GPC/SEC Software for OpenLab CDS User Guide
The following sections are added to this item.
Method Parameters
GPC Column Calibration
GPC Method Parameters
The Single Data Analysis Method Table Row Item
This report item allows the selection of a single table row for display. The following sections are added to this item.
Method Parameters
GPC Column Calibration
GPC Method Parameters
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GPC/SEC Software for OpenLab CDS User Guide 81
GPC Specific Report Items
GPC specific report items are provided which comprise of a series of tables and plots. The GPC report items can be found in the GPC node in the Reporting View under ‘Report Items’.
The added items can be divided into:
GPC Column Calibration Specific Items GPC Analysis Specific Items
GPC Column Calibration Details Table Peak Results Table
GPC Calibration Points Table Peak Results Summary Table
Single GPC Calibration Plot MW Ranges Table
GPC Calibration Plot Overlaid MW Ranges Summary Table
Percentage Fractions Table
Percentage Fractions Summary Table
GPC Time Slice Table
Single GPC Distribution Plot
GPC Distribution Plot Overlaid
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GPC Column Calibration Specific Items
The GPC Column Calibration Details Table Item
Provides a two-column table (<parameter name>, <value>) which provides the following information:
Method name Residual sum of squares FRM RT (min)
Calibration type Coefficient of determination FRM source
Signal Linear correlation coefficient High MW limit RT (min)
K ((10e-5) dL/g) Corrected sum of squares Low MW limit RT (min)
Alpha Standard Y error estimate High limit MW (g/mol)
Order of curve fit FRM name Low limit MW (g/mol)
Curve fit equation
Customization Available
The items and the order in which they are displayed are fixed. The format of individual items in the table cannot be customized.
The GPC Calibration Points Table Item
Provides the following parameters for each calibration data point:
RT corrected (min) Sample name Residual
RT actual (min) Source chromatogram Source chromatogram data
sequence
Source chromatogram project Predicted MW (g/mol) Assigned MW (g/mol)
Signal FRM RT (min) Log MW
Percent error
Customization Available
The items and the order in which they are displayed can be changed. The properties of each parameter column can be customized.
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GPC/SEC Software for OpenLab CDS User Guide 83
The Single GPC Calibration Plot Item
Provides a GPC Calibration Plot which contains a plot of Log MW (g/mol) vs Retention Time (min).
If this item is used in a Single Injection report, the output will consist of a plot of the GPC calibration used to process the injection.
If this item is used in a Sequence Summary report, the output will consist of a separate calibration plot, one for each injection in the sequence summary.
Customization Available
Plot Properties
Show gridlines checkbox If checked, the axes gridlines are displayed
on the calibration plot
Show legend checkbox If checked, the name of the injection is
displayed on the top left corner of the plot
Show calibration points checkbox If checked, the individual calibration data
points are displayed in the calibration plot
The following items allow you to define:
Color of points The color of the calibration data points
Point size The point size of the calibration data points
Point shape The point shape of the calibration data
points
Show calibration line checkbox If checked, displays the calculated line of fit
in the calibration plot
The following items allow you to define:
Line color The color of the calibration line
Line weight The thickness of the calibration line
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84 GPC/SEC Software for OpenLab CDS User Guide
The options available in this dialog allow you to define the axes limits for the GPC Calibration plot item.
Plot Scaling
MW Axis custom scaling checkbox MW Axis custom scaling checkbox
Minimum & Maximum limits Minimum & Maximum limits
RT axis custom scaling checkbox RT axis custom scaling checkbox
Minimum & Maximum limits Minimum & Maximum limits
The GPC Calibration Plot Overlaid Item
Provides a GPC Calibration Plot which contains overlaid plots of Log MW (g/mol) vs Retention Time (min).
If this item is used in a Single Injection report, the output will consist of a single plot of the GPC calibration used to process the injection.
If this item is used in a Sequence Summary report, the output will consist of a single plot contain an overlay of all the GPC calibrations, one from each selected injection in the sequence summary.
Customization Available
Plot Properties
Show gridlines checkbox If checked, the axes gridlines are displayed on the
calibration plot
Injection Colors The color of the calibration line and the data points
can be defined for each individual injection # (1- 8).
Show calibration points checkbox If checked, the individual calibration data points will
be displayed in the calibration plot
The following items allow you to select:
Point size The point size of the calibration data points
Point shape The point shape of the calibration data points
Show calibration line checkbox If checked, displays the calculated line of fit in the
calibration plot
Show calibration line checkbox
Line weight The thickness of the calibration line can be defined
The options available in this dialog allow you to define the axes limits for the GPC Calibration plot item.
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GPC/SEC Software for OpenLab CDS User Guide 85
Plot Scaling
MW Axis custom scaling checkbox MW Axis custom scaling checkbox
Minimum & Maximum limits Minimum & Maximum limits
RT axis custom scaling checkbox RT axis custom scaling checkbox
Minimum & Maximum limits Minimum & Maximum limits
GPC Analysis Specific Items
The Peak Results Table Items
Both tables provide the following parameters for each processed peak:
Peak# Mp (g/mol) PD
Sample name Mn (g/mol) FRM name
Data file Mw (g/mol) FRM RT (min)
Signal description Mz (g/mol) FRCF
Method Mz+1 (g/mol) K ((10e-5) dL/g)
Results set Mv (g/mol) Alpha
RT (min)
The Peak Results Table Item
If this item is used in a Single Injection report, the output will consist of a table containing the calculated MW Averages for the selected processed injection.
If this item is used in a Sequence Summary report, the output will consist of a separate table containing the calculated MW Averages, one table for each selected injection in the sequence summary.
The Peak Results Summary Table Item
If this item is used in a Single Injection report, the output will consist of a table containing the calculated MW Averages for the selected processed injection.
If this item is used in a Sequence Summary report, the output will consist of a single table containing the calculated MW Averages for all selected injections in the sequence summary.
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Customization Available
The items displayed and the order in which they are displayed can be changed. The properties of each parameter column can be customised.
The MW Ranges Table Items
Both tables provide the following parameters for each processed peak:
Peak# Method Method low limit MW (g/mol)
Sample name Results set Low limit MW (g/mol)
Data file Method high limit MW (g/mol) Percent MW
Signal description High limit MW (g/mol) MW Range Name
The MW Ranges Table Item
If this item is used in a Single Injection report, the output will consist of table containing the calculated MW ranges for the selected processed injection.
If this item is used in a Sequence Summary report, the output will consist of a separate table containing the calculated MW ranges, one table for each selected injection in the sequence summary.
The MW Ranges Summary Table Item
If this item is used in a Single Injection report, the output will consist of a table containing the calculated MW ranges for the selected processed injection.
If this item is used in a Sequence Summary report, the output will consist of a single table containing the calculated MW Ranges for all selected injections in the sequence summary.
Customization Available
The items displayed and the order in which they are displayed can be changed. The properties of each parameter column can be customized.
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GPC/SEC Software for OpenLab CDS User Guide 87
The Percentage Fractions Table Items
Both items provide the following parameters for each processed peak:
Peak# High fraction percent Low fraction percent
Sample name High fraction RT [min) Low fraction RT (min)
Data file MW at high fraction (g/mol) MW at low fraction (g/mol)
Signal description High fraction Mn (g/mol) Low fraction Mn (g/mol)
Method High fraction Mw (g/mol) Low fraction Mw (g/mol)
Results set
The Percentage Fractions Table Item
If this item is used in a Single Injection report, the output will consist of a table containing the calculated Percentage Fractions for the selected processed injection.
If this item is used in a Sequence Summary report, the output will consist of a separate table containing the calculated Percentage Fractions, one table for each selected injection in the sequence summary.
The Percentage Fractions Summary Table Item
If this item is used in a Single Injection report, the output will consist of a table containing the calculated Percentage Fractions for the selected processed injection.
If this item is used in a Sequence Summary report, the output will consist of a single table containing the calculated Percentage Fractions for all selected injections in the sequence summary.
Customization Available
The items displayed and the order in which they are displayed can be changed. The properties of each parameter column can be customized.
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The GPC Time Slice Table Items
This item provides the following parameters for each processed peak:
Peak# RT (min) dw/dLogM
Sample name Response Cum Ht
Data file Slice MW Norm Ht
Signal description LogM
Method
Results set
If this item is used in a Single Injection report, the output will consist of a table containing the GPC time slice values for the selected processed injection(s).
Customization Available
The items displayed and the order in which they are displayed can be changed. The properties of each parameter column can be customized.
The Single GPC Distribution Plot Item
Provides a GPC Distribution Plot which contains a plot of
▪ dw/dLogM vs Fitted MW (g/mol)
▪ Ht (%) vs Fitted MW (g/mol)
If this item, is used in a Single Injection report;
▪ Each distribution plot from an injection will be displayed on a separate plot in the report.
If this item, is used in a Sequence Summary report;
▪ Each distribution plot from an injection will be displayed on a separate plot in the report.
Customization Available
Plot Properties
Show gridlines checkbox If checked, the axes gridlines are displayed on the GPC
Distribution plot
Show legend checkbox If checked, the name of the injection is displayed on the top
left corner of the plot
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GPC/SEC Software for OpenLab CDS User Guide 89
Distribution
The following items allow you to define:
Line Color The color of the GPC Distribution plot
Line weight The thickness of the GPC Distribution plot
Show Cumulative plot checkbox If checked, displays the Cumulative plot on the second Y
axis.
The following items allow you to define:
Line Color The color of the Cumulative plot
Line weight The thickness of the Cumulative plot
Plot Scaling
MW Axis custom scaling checkbox (X axis)
Minimum limits (g/mol or Daltons)
Maximum limits (g/mol or Daltons)
dw/dlogM axis custom scaling checkbox (Y1 axis)
Minimum dw/dlogM Axis limit
Maximum dw/dlogM Axis limit
Percentage height axis custom scaling checkbox (Y2 axis)
Minimum Percentage height axis limit (%)
Maximum Percentage height axis limit (%)
The GPC Distribution Plot Overlaid Item
Provides a GPC Distribution Plot Overlaid which contains overlaid plots of
▪ dw/dLogM vs Fitted MW (g/mol)
▪ Ht (%) vs Fitted MW (g/mol)
If this item, is used in a Single Injection report;
▪ All the distribution plots from an injection will be displayed on one plot on the report.
If this item, is used in a Sequence Summary report:
▪ All the distribution plots from all injections will be displayed on one plot on the report.
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Customization Available
Plot Properties
Show gridlines checkbox If checked, the axes gridlines are displayed on the GPC
Distribution plot
Show legend checkbox If checked, the name of the injection is displayed on the top
left corner of the plot
Injection Colors The color of the GPC Distribution plot (and cumulative plot
is selected) can be defined for each individual injection #
(1- 8).
Distribution
Line weight The thickness of the GPC Distribution plot
Show Cumulative plot checkbox If checked, displays the Cumulative plot on the second Y
axis.
Line weight The thickness of the Cumulative plot
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GPC/SEC Software for OpenLab CDS User Guide 91
Plot Scaling
MW Axis custom scaling checkbox (X axis)
Minimum limits (g/mol or Daltons)
Maximum limits (g/mol or Daltons)
dw/dlogM axis custom scaling checkbox (Y1 axis)
Minimum dw/dlogM Axis limit
Maximum dw/dlogM Axis limit
Percentage height axis custom scaling checkbox (Y2 axis)
Minimum Percentage height axis limit (%)
Maximum Percentage height axis limit (%)
The following table outlines the GPC Report items and their use in the three different report types
Report Type
Injection Sequence Cross Sequence
GPC Column Calibration Specific Items
GPC Column Calibration Details Table Y
GPC Calibration Points Table Y
Single GPC Calibration Plot Y
GPC Calibration Plot Overlaid Y Y Y
GPC Analysis Specific Items
Peak Results Table Y
Peak Results Summary Table Y Y
MW Ranges Table Y
MW Ranges Summary Table Y Y
Percentage Fractions Table Y
Percentage Fractions Summary Table Y Y
GPC Time Slice Table Y
Single GPC Distribution Plot Y
GPC Distribution Plot Overlaid Y Y Y
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92 GPC/SEC Software for OpenLab CDS User Guide
Report Type Selection Guide
If you require:
A detailed report per injection.
Use the Report Type: Injection Report
GPC Report item type:
A single report that provides a summary for the selected injections in a sequence in a project.
Use the Report Type: Single Sequence Summary
GPC Report item type: Use the summary table and overlaid plot versions of GPC
report items
A single report that provides a summary for the selected injections across a number of sequences in a project.
Use the Report Type: Cross Sequence Summary
GPC Report item type: Use the summary table and overlaid plot versions of GPC
report items
Reporting
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Compliance
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10. Compliance
Storage of Parameters and Results
The GPC specific processing parameters, column calibrations, GPC results and report templates are all stored within the OpenLab CDS system.
▪ The GPC specific processing parameters and column calibration are stored as part of the processing method
▪ The GPC results generated from an injection are stored as part of the results of a processed Injection
GPC Specific Privileges & Roles
The GPC/SEC software uses the compliance, roles and privileges features provided by OpenLab Control Panel/Shared Services and provides three GPC specific privileges:
GPC specific privileges Location
Ability to edit GPC Parameters in a processing method Project / Processing Method / Edit GPC parameters
Ability to create and modify a GPC column calibration Project / Create and modify GPC calibration
Ability to perform a GPC analysis Project / Data Processing / Do GPC analysis
Compliance
GPC/SEC Software for OpenLab CDS User Guide 95
The GPC specific privileges are assigned to the following default roles provided within the OpenLab CDS platform.
GPC Privileges
Role Edit GPC
parameters
Create and modify
GPC calibration Do GPC analysis
Everything Y Y Y
Chemist Y Y Y
Technician N N Y
These privileges mean that a user assigned as:
A Chemist is able to:
Define/edit a processing method for
GPC
Generate/modify a GPC column
calibration
Generate GPC results of samples
A Technician is only able to:
Generate GPC results of samples
The ability to edit GPC processing
parameters and create a GPC
calibration are locked out
Auditing
The GPC/SEC software hooks into the following OpenLab audit processes:
1 The processing method audit trail
2 The injection audit trail
3 The result set audit trail
Logs
The GPC/SEC software log is accessible from the Diagnostics/Logs section.
Format of the Log
The log file uses the same format as the other OpenLab log files.
Content of the Log
The content uses the same format as the other OpenLab log files.
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96 GPC/SEC Software for OpenLab CDS User Guide
Diagnostics
General
Diagnostic information about the GPC/SEC software is accessible from the Diagnostics section of the Administration section accessed from the OpenLab Control Panel.
Installed Components
No GPC specific information is shown in this area.
Compliance
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Exporting Information
98 GPC/SEC Software for OpenLab CDS User Guide
11. Exporting Information
The standard export features provided by OpenLab are available within the various GPC specific windows and grids, allowing:
Graphics (Chromatograms, calibrations & distribution plots) to be exported to the standard graphic formats (EMF (*.emf) and PNG (*.png)).
The contents of tables and grids to be exported to various standard file formats. (CSV File (*.csv), Excel Workbook (*.xls), Word document (*.doc) and PDF File (*.pdf))
In addition, an option is available which allows the GPC results of a processed injection to be exported as a simple ASCII file. The generated ASCII file can be loaded directly into Excel and provides access to the full GPC results and slice by slice data of the processed peak(s) within the injection.
Processing Method
The parameters defined in a processing method can be exported to the standard file formats using a suitable report template containing the Data Analysis Method Information Multi Column report item accessed from the Method Information section.
Exporting Information
GPC/SEC Software for OpenLab CDS User Guide 99
GPC Column Calibration
Column Calibration Plot
The Column calibration plot can be exported as a graphic image from the GPC Calibration Plot tab of the processing method using the options on the right click menu available in the tab.
Column Calibration Data Points & Details
The GPC column calibration data points table can be exported to the standard file formats using the options on the right click menu available in the GPC Calibration Plot tab of the processing method.
The GPC Column Calibration data points table and the calibration details can be exported to the standard file formats using the options on the right click menu available in the right click menu available in the GPC Calibration Details tab.
GPC Results
MW Averages
The MW Averages and related information displayed in the Peak Results Tab of the GPC Results Window accessed from the Results View can be exported to the standard file formats using the options on the right click menu available in the Peak Results tab.
MW Ranges
The MW Ranges table displayed in the MW Ranges Tab of the GPC Results Window accessed from the Results View can be exported to the standard file formats using the options on the right click menu available in the MW Ranges tab.
Exporting Information
100 GPC/SEC Software for OpenLab CDS User Guide
Percentage Fractions
The Percentage Fractions table displayed in the Percentage Fractions tab of the GPC Results Window accessed from the Results View can be exported to the standard file formats using the options on the right click menu available in the Percentage Fractions tab.
Full GPC Results and Slice Table
The full GPC analysis results including the peak slice table can be exported as a tab separated ASCII text.
Click on the GPC Results Window to enable the GPC Results menu on the ribbon bar.
Click on this menu item and select the Export Results option which will display the Save as dialog.
MW Distribution & Cumulative Plots
The Distribution & Cumulative Plots displayed in the GPC Distributions window accessed from the Results View can be exported as a graphic image using the options on the right click menu available in the GPC Distributions window.
Column Calibration Used to Process an injection
▪ The Column Calibration plot displayed in the GPC Calibration Plot View
accessed from the Results View can be exported as a graphic image using the options on the right click menu available in the GPC Calibration Plot View.
▪ The GPC Column Calibration data points table and the calibration details can be exported to text from the GPC Column Calibration tab in the GPC Results view accessed from the Results View by using the options on the right click menu available in the GPC Column Calibration tab.
Exporting Information
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Appendix
102 GPC/SEC Software for OpenLab CDS User Guide
12. Appendix
Licensing
A GPC specific data analysis license is delivered as part of the GPC Data Analysis software.
▪ There is no GPC specific ‘Data Acquisition’ license
▪ The GPC/SEC software does not restrict the number of GPC instruments that can be configured on a system
▪ The GPC license is provided in the standard 60 day startup license
▪ The GPC license is installed through the OpenLab Control Panel
Configurations
Workstation Installation
Any concurrent instances of Data Analysis will have the ability to use the GPC module. All concurrent instances of Data Analysis running on the PC will have the ability to use the GPC module.
Client/Server Installation
This configuration provides a pool of GPC analysis licenses available from the server on a “first come first served” basis. The number of concurrent seats possible is by the GPC analysis license file installed.
Appendix
GPC/SEC Software for OpenLab CDS User Guide 103
AIC Installation
In order to perform unattended automatic GPC processing, any AIC to be used for GPC applications requires the GPC software installing on the AIC and a GPC license.
License Enforcing
The GPC analysis license only protects the GPC processing functionality within OpenLab Data Analysis. The PC can be used to process data using other processing method types.
Instrument control and data acquisition using OpenLab is not protected by the GPC analysis license.
The generation of report templates and reports is not protected by the GPC analysis license.
GPC Analysis License Available
The following GPC functions and features are available when a project is loaded into an instance of Data Analysis.
GPC/SEC Processing Method
• Creating a new GPC method
• Modifying an existing GPC method
GPC Column Calibration
• Processing injections using a GPC method to generate a GPC column calibration for the method
• Reviewing an existing GPC column calibration associated with a GPC method
GPC Analysis
• Processing unprocessed injections using a GPC method to generate new GPC results.
• Reprocessing injections using a GPC method to generate new GPC results.
• Reviewing existing GPC results of processed injections.
Appendix
104 GPC/SEC Software for OpenLab CDS User Guide
GPC Analysis License Not Available
If a GPC License is not available (not installed or no license available), then the user will not be able to perform GPC processing, the GPC/SEC software will function only as a ‘GPC Results Reviewer’.
The following GPC functions will not be available when a project is loaded into an instance of Data Analysis and no GPC license is available.
GPC/SEC Processing Method
The GPC parts of a processing method are locked.
1 A user can edit an existing processing method or create a new processing method or of any other type.
2 If a user loads an existing processing method or creates a new processing method (Method type = ‘GPC’) then the following error message is displayed. “Error Agilent GPC Analysis license is not available. GPC processing is disabled” The processing method will still be loaded or created.
For Cases 1 & 2 above:
1 All the GPC processing parameters and any associated GPC column calibration will be viewable in the ‘GPC/GPC Method’ and ‘GPC/GPC Column Calibration’ sections of the processing method.
2 It is still possible to edit generic parts of the processing method but the warning “inconsistency between results and parameters (method or injection list) – reprocess to resolve” will be displayed.
Appendix
GPC/SEC Software for OpenLab CDS User Guide 105
GPC Column Calibration Functions
The user will be able to view an existing GPC column calibration associated with a GPC processing method.
The user will NOT be able to process injections to generate a GPC column calibration for a GPC processing method.
GPC Analysis Functions
Existing GPC Results
The GPC results of any processed injections will be viewable but will be locked as read only.
Processing/Reprocessing Injections
The user will not be able to create new GPC results from injections. (e.g. manually changing integration limits, processing an injection or reprocess an injection.) On reprocessing injections (either to generate a column calibration or process an injection), the following error will be displayed.
Injection processed (with errors) Errors: GPC Analysis: No GPC analysis license is available
No results will be generated and any existing GPC results will be cleared for the instance of the analysis session.
▪ The content of all tabs in the GPC Results window will be empty. (Peak Results, GPC Column Calibration, MW Ranges and Percentage Fractions)
▪ The GPC MW Distributions window will be empty
▪ The GPC Column Calibrations window will be empty
The user is not able to save the changes so can only exit the results set/project and the existing results will remain unchanged.
Appendix
106 GPC/SEC Software for OpenLab CDS User Guide
Loading a Project/Results Set - No GPC Data in the Results Set
If a results set is loaded that does not contain any GPC analyses, (GPC processing method, calibration, injections processed by a GPC method), then no errors or warnings are displayed. It will be possible to process the data using a processing method other than a GPC processing method.
Loading a Project/Results Set - GPC Data in the Data Set
If a results set is loaded that contains GPC analyses, (GPC processing method, column calibration, processed injections), then the following error message is displayed: “Error Agilent GPC Analysis license is not available. GPC processing is disabled”
It is only possible to view existing GPC data and results.
Appendix
GPC/SEC Software for OpenLab CDS User Guide 107
The Default Report Templates supplied.
A series of report templates that are specific to GPC and SEC applications are installed as part of the product installation. The report templates are installed to the central location for default report templates.
The report templates consist of two sets, one designed for typical GPC applications and the other for SEC applications.
Each template set is supplied in A4 and Letter paper sizes
The filenames of the template in the two sets supplied are:
GPC Report Type Template Filename
Sample Analysis Injection
Concise Provides details on a per sample injection
basis
GPC_Sample_Analysis
GPC_Sample_Analysis_Letter
Full GPC_Sample_AnalysisLong
GPC_Sample_AnalysisLong_Letter
Sequence Summary
Concise Provides summary reports for a series of
injections in the same sequence
GPC_SeqSummary
GPC_SeqSummary_Letter
Full GPC_SeqSummaryLong
GPC_SeqSummaryLong_Letter
Cross Sequence Summary
Concise Provides summary reports for a series of
injections across sequences
GPC_CrossSeqSummary
GPC_CrossSeqSummary_Letter
Full GPC_CrossSeqSummaryLong
GPC_CrossSeqSummaryLong_Letter
Column Calibration Report
Provides the column calibration used for
the selected injection
GPC_Calibration
GPC_Calibration_Letter
Appendix
108 GPC/SEC Software for OpenLab CDS User Guide
SEC Report Type Template Filename
Sample Analysis Injection Provides details on a per sample
injection basis
SEC_Sample_Analysis
SEC_Sample_Analysis_Letter
Sequence Summary Provides a summary report for a series
of injections in the same sequence
SEC_SeqSummary
SEC_SeqSummary_Letter
Cross Sequence Summary Provides a summary report for a series
of injections across sequences
SEC_CrossSeqSummary
SEC_CrossSeqSummary_Letter
Column Calibration Report Provides the column calibration used for
the selected injection
SEC_Calibration
SEC_Calibration_Letter
Appendix
GPC/SEC Software for OpenLab CDS User Guide 109
Additions to the OpenLab Platform
GPC Specific Processing
Method Type
A "GPC specific" processing method type is added to the method
options. The GPC method is based on the standard GC/LC Area
Percent method template provided by OpenLab.
GPC Processing
Parameters
The GPC specific processing parameters are accessed from a “GPC
specific” section of the method.
Storage of GPC
Parameters
The GPC specific processing parameters are stored as part of the
method.
Storage of GPC Column
Calibration
A GPC column calibration generated from injections is stored as part
of the method used. Only one GPC column calibration can exist for
the method.
Storage of GPC Results The GPC results generated from an injection are stored as part of the
standard results of the processed injection.
Addition of a GPC Results
View
This view comprises of the following tabs:
Peak Results
GPC Column Calibration
MW Ranges
Percentage Fractions
Addition of a GPC
Distributions Plot View
This view comprises of a plot of the GPC Molecular weight
distribution plot(s) for the selected processed Injection(s).
Addition of a GPC
Calibrations Plot View
This view comprises of a plot of the column calibration plot(s) for the
selected processed Injections.
Reporting Additions of GPC specific information to the processing method report
items
Additions of GPC specific report Items.
Appendix
110 GPC/SEC Software for OpenLab CDS User Guide
A series of report templates are supplied with the software which
have been designed to cater for the common types of output required
from the software.
Compliance Features Audit logs
Privileges
Standard Functions & Options available
The standard features provided by OpenLab are available within the GPC specific windows and grids.
Graphics
Zoom
Last Zoom
Auto Scale
Copy to Clipboard
Export to file
Grids / Text
Ability to:
Order on the active column
Re size the displayed columns
Re order the displayed columns
Content Specific Right Click Menu
For example:
Choose Column
Numeric Precision
Copy to Clipboard
Export to File
‘Save As’ dialog
Displays the standard OpenLab ‘Save As’
dialog.
Standard available types dependent of the
type of data to be saved.
Appendix
GPC/SEC Software for OpenLab CDS User Guide 111
In This Book
This document describes the features and evaluation parameters of the Agilent Technologies GPC/SEC software for the OpenLab CDS platform. It contains the following information:
• Overview
• Getting Started
• Workflows
• The GPC/SEC Processing Method
• The GPC Results View
• The GPC Distributions View
• The GPC Calibrations Plot View
• Reporting
• Compliance
• Exporting Information
• Appendix
© Agilent Technologies 2019
Printed in Germany
08/2019
D0000361