genetics of viruses and bacteria
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Genetics of Viruses and Bacteria. Ch 19 & 20. Everything you need to know about viruses. Infected? With What? How can you tell?. - PowerPoint PPT PresentationTRANSCRIPT
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Genetics of Viruses and BacteriaCh 19 & 20
Everything you need to know about
viruses.
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Infected? With What?How can you tell?• Start with Symptoms: illness is abrupt and is
characterized by fever, headache, joint and muscle aches, sore throat, and weakness, followed by diarrhea, vomiting, and stomach pain. A rash, red eyes, internal and external bleeding from all orifices.
• Who is at risk? Persons on the southeast coast of Africa, Congo,Sudan, Zaire, and Uganda
• Treatment: No known treatment• Disease: Ebola Hemorragic Fever• Surveillance: CDC SPECIAL PATOGENS UNIT,
WHO EbolaOutbreakhistory
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Infected? With What?How can you tell?• Start with Symptoms: Myalgia, fever,
headache, extreme tiredness, dry cough, sore throat, runny or stuffy nose, and muscle aches.
• Who is at risk? Everyone
• Treatment: Bed Rest and Fluids
• Disease: Influenza
• Surveillance: CDC and WHO
How the fluChanges.
Avian FluPBS
AntigenicShifts
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The Bacteriophageor Phage
• Viruses that attack bacteria
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Characteristics of Viruses
• Much smaller than a bacterium.• Have 2 essential structural
features: Nucleic Acid (DNA or RNA) and Protein Coat called a capsid surrounding it.
• Must have a host (host range) in order to propagate itself.
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Viral Shapes Fig 19.3
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Grouping VirusesFig 19.1
• Presence of a Capsid and Envelope
• Whether they contain RNA or DNA
• Shape
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Virus Reproduction• DNA viruses can immediately
produce RNA to construct new viruses or become part of host’s DNA.
• RNA viruses must uses reverse transcriptase.
Hiv Replication
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HIV is a retrovirus: uses reverse transcriptase.
Provirus: integrated viral DNA
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Phage Lysogenic Cycle DetailsFig 19.6
• Virus replicates without destoying the host cell. – Prophage: Dormant virus within host (HIV)– Prophage switches to lytic phase.– Temperate viruses are capable of both lytic
and lysogenic cylces within a bacterium.
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The Lysogenic Cycle
The LysogenicCycle
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Phage Lytic cycle details.
• DNA replication produces more viral DNA
• Transcription and translation produce protein coats and glycoprotein spikes
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The Lytic Cycle
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Virus Evolution• Plasmids (circular DNA in bacteria and
Yeast), or Transposons (mobile DNA segments) may have escaped.
• May have originated when fragments of host genes escaped or were expelled from cells or from prions.
• Can mutate quickly.
• Treated with antivirals
• Prevented by vaccines.
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Other non-life forms Viroids and Prions
• Viroids: the smallest particles that are able to replicate.
• A short, circular RNA that has no capsid
• They disrupt plant cell metabolism
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• Prions: (PREE-ahnz) are misfolded proteins that clump together inside a cell. Normal proteins begin to fold and clump as well. The clumping kills the cell. Fig. 19.11
• Composed of about 250 amino acids and have no associated nucleic acid.
• Indestructible. Can’t destroy or deactivate through normal cooking temperatures.
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• Prions cause scrapie in sheep, mad cows disease, and Creutzfeld-Jakob disease in humans
Good reviewClips
Of GeneralConcepts
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Infected? With What?How can you tell?
• Start with Symptoms: Severe abdominal pain, weight loss, stomach ulcers, nausea and vomiting.
• Who is at risk? Everyone
• Treatment: Antibiotics
• Disease: Stomach Ulcers caused by H. Pylori
• Surveillance: Both National and International By CDC and WHO How it
Works
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What are bacteria?
• Single celled microscopic prokaryotes
• Circular DNA condensed into a nuceoid. (no nuclear membrane)
• With or without a peptidoglycan in cell wall.
• Autotrophs or heterotrophs
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How are bacteria named?
Shape:
Group Arrangement: Strepto= Chains Staphylo= Clusters
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Parts of a bacteria.• All have a Cell Wall and Plasma
Membrane
• Cytoplasm, Pilli, Plasmid
• Some have Flagella and Capsules • May make Endospores when
dormant for protection.Bacterial
ConjugationDon’t Look!
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Donating DNA
Conjugation:
primitive sexual method. Bacterial transformation. Discovered by Frederick Griffith 1927.
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How do bacteria reproduce?
• Binary Fission = asexual.
• Replicate their DNA in Both directions from a single point of origin= Theta Replication, because it looks like Θ.
• Very few mutations. But reproduce often enough that mutations show up quickly.
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What is a plasmids and what do they do?
• Plasmid: foreign, circular, self-replicating DNA molecule in a bacterium.
• Bacterium may have more than one plasmid.
• Express genes they carry– Create pilli = F plasmid– Resist antibiotics = R plasmid
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What is an Operon?
• A set of genes found in bacteria and phages that combined with the promoter and operator express those genes.
• A gene regulation mechanism.• Jacob and Monod (1940) discovered the first
operon in E.coli. They found 2 types:– Lac operon: Inducible operon. Always off– Tryptophan operon: Repressible operon. Always on.– The correct signal will switch the Lac on or the
Tryptophan off.
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Operon Operations
• Terms to know:
• Promoter: RNA polymerase binds to this region of the DNA
• Repressor: binds to operator preventing RNA polymerases attachment. Noncompetitive inhibition.
• Operator: Where the repressor attaches at the start of the bacterial operon.
Lac Operon Overview
The AP Version of the Lac Operon
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The Lac operon: Inducible
• Job of the Lac operon: to utilize lactose turning it into glucose and glactose.
• Three enzymes necessary to do this:– B-galactosidase, permease, and transacetylase
• RNA polymerase must bind to the promoter to allow the cell to utilize lactose.– Allosteric effector, allolactose, acts as an inducer.
Allolactose binds to the repressor causing a conformation of the repressor. It can not longer repress.
• If a repressor binds to the operator (noncompetitive inhibition) lactose can not be utilized.
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Tryptophan Operon: Repressible
• Continuously on unless switched off by a corepressor.
• rRNA polymerase binds to the promoter and transcribes.
• Repressor combines with the corepressor on the tryptophan gene it changes conformation, binds to the operator = RNA polymerase can not bind and transcription is blocked.
• Turned off when tryptophan levels are high, negative feedback.
Tryp Operon
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What is an Allosteric effector?
• Tryptophan: Tryptophan Operon
• Lactose: Lac Operon
• The binding of a regulatory molecule to a protein at one site that affects the function of the protein at a different site.