gabrielle barran providing new blood monitoring tools for ... · presenting the epstein barr virus...

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CD69 FACS assay to monitor T cell activation note: functional assay performed on different TCR within the same model; LTR117. SKW3.hCD8 cells expressing an alternative TCR (LTR5) were used as a negative control. Day 1: SKW3.hCD8.LTR117 and LTR5 cells were cultured with different stimulation conditions (media alone and CD3/CD28 beads then APCs: K562, SAL.B7, SAL.B7/EBV RPP , SAL.B4001, SAL.B4002, C1R, C1R.B7, C1R.B7/EBV RPP and C1R. B4002) at a 1:1 ratio for 17hrs at 37ᵒC. Day 2: An antibody cocktail containing CD3, CD8, CD69 and Live/Dead Dye was added and the cells were acquired by flow cytometry. Providing new blood monitoring tools for the prognosis and prevention of transplant rejection Understanding the role of cross- reactive antiviral T cells Supervised by: Dr Nicole Mifsud and Dr Louise Rowntree References 1. D’Orsogna LJ, Amir AL, Zoet YM, et al. New tools to monitor the impact of viral infection on the alloreactive T-cell repertoire. Tissue Antigens 2009 2. Van den Heuvel H, Heutinck KM, van der Meer-Prins EP, et al. Detection of Virus-Specific CD8+ T Cells With Cross-Reactivity Against Alloantigens: Potency and Flaws of Present Experimental Methods. Transplantation Direct 2015 3. Rowntree L, Kotsimbos T, Mifsud N, et al. Deciphering the clinical relevance of allo-human leukocyte antigen cross-reactivity in mediating alloimmunity following transplantation. Current Opinion in Organ Transplantation. 2016;21(1):29-39. Methods Manipulating TCR into pMIG vector 4X TCR sequences were analysed from 2 donors; lung transplant recipient (LTR) 54.1/54.2 and 119.2/119.2a 1. The TCR constructs and pMIGII vector were digested using restriction enzymes EcoRI and BglII to create ‘sticky ends’ 2. The TCRs were then ligated into the vector (containing ampicillin resistance and GFP tag) and transformed into DH5α competent E.coli cells to amplify and purify DNA 3. The DNA was isolated from selected colonies for sequencing. If the sequence was correct, the plasmid was used for retroviral transduction into the SKW3.hCD8 cells. Introduction From the first encounter with an antigen our immune system moulds specific T cells to establish a memory pool capable of defending the individual from subsequent attack. In some cases, memory T cells whilst specific for the original antigen presented by their own human leukocyte antigen (HLA), can also recognise alternative unrelated HLA-antigen complexes; termed heterologous immunity. Here we examine the ability of certain virus-specific memory T cells to cross-react with allogenic HLA complexes, such as observed in the setting of solid organ transplantation. Memory CD8+ T cells from lung transplant recipients were identified as specific for HLA-B*07:02 presenting the Epstein Barr Virus epitope EBV RPP and cross-reactive with HLA-B*40:02. Aims To confirm the cross-reactivity of this TCR model by expressing the TCR in a cell line (SKW3.hCD8) in order to perform functional tests using stimulator cell lines expressing the cognate (HLA-B*07:02 with and without the EBV RPP peptide) and cross-reactive (HLA-B*40:02) HLAs and measuring activation of the SKW3.hCD8.TCR cells by CD69 expression on flow cytometry. Figure 2: pMIGII plasmid retroviral vector map adapted from Holst, Nature Protocols 2006; 1:406 figure 2a. Surface staining to confirm expression of HLA/TCR SKW3.hCD8 cells were stained with conjugated antibodies PECy7 CD3 and PerCPCy5.5 CD8 to confirm expression of TCR. The two stimulator cell lines (K562 (SAL) and C1R) were stained with primary antibodies ME-1 (specific for HLA-B7) and Bw6 (specific for a serological group of HLA-B alleles) to confirm HLA expression. Bw6+ ME-1+ indicated HLA-B7 expression, Bw6+ ME-1- is indicative of HLA-B40 expression. Gabrielle Barran 150119742 [email protected] Results 0 2 4 6 8 10 12 14 16 18 20 MEDIA CD3 CD28 K562 SAL B7 SAL B7/RPP SAL B4001 SAL B4002 C1R C1R B7 C1R B7/RPP C1R B4002 Fold change in MFI Stimulation conditions Change in Mean Fluorescence Intensity (MFI) of activation marker CD69 SKW3. hCD8αβ LTR117 SKW3. hCD8αβ LTR5 Conclusion We did manage to show cross reactivity within the SAL cell line as the B4002 CD69 MFI is greater than that of the B7 alone and parental (K562) by over 4 fold However, the activation in the C1R cell line has to be disregarded due to the B7 alone having a greater response. This does fortunately ask a different question: is the peptide of importance narrowed down to one cell line? Discussion This step within the project has confirmed cross- recognition, however, further investigations are needed to establish the specific peptide being presented by the alloreactive HLA and the immune response to this recognition (whether or not the target cell is destroyed) in order to bring this investigation closer to clinical applications. Figure 5: all samples displayed are from the CD8 (PerCP Cy55+) and CD3 (PE Cy7+) subset Figure 3 (below): Gating was set up on the + control to show to steps of analysis by flow cytometry Figure 4 Figure 1 SAL B4001 SAL B4002 SAL B7/RPP SAL B7 K562 CD3 CD28 MEDIA Level of CD69 upregulation was used to measure activation; media alone was used as a negative control and CD3 CD28 was used as a non-specific activator for a positive control. Two different cell lines were tested each expressing three different HLAs + parental alone. All conditions were compared on a histogram (figure 5) and converted to a graph (figure 4) showing a fold increase in mean fluorescence intensity from the media alone stimulation condition.

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Page 1: Gabrielle Barran Providing new blood monitoring tools for ... · presenting the Epstein Barr Virus epitope EBV RPP and cross-reactive Aims with HLA-B*40:02. • To confirm the cross-reactivity

CD69 FACS assay to monitor T cell activationnote: functional assay performed on different TCR within the same model; LTR117. SKW3.hCD8 cellsexpressing an alternative TCR (LTR5) were used as a negative control.

Day 1:SKW3.hCD8.LTR117 and LTR5 cells were cultured with different stimulation conditions(media alone and CD3/CD28 beads then APCs: K562, SAL.B7, SAL.B7/EBVRPP, SAL.B4001,SAL.B4002, C1R, C1R.B7, C1R.B7/EBVRPP and C1R.B4002) at a 1:1 ratio for 17hrs at 37ᵒC.

Day 2:An antibody cocktail containing CD3, CD8, CD69 and Live/Dead Dye was added and thecells were acquired by flow cytometry.

Providing new blood monitoring tools for the prognosis and prevention of transplant rejection

Understanding the role of cross- reactive antiviral T cells

Supervised by: Dr Nicole Mifsud and Dr Louise RowntreeReferences1. D’Orsogna LJ, Amir AL, Zoet YM, et al. New tools to monitor the impact of viral infection on the alloreactive T-cell repertoire.

Tissue Antigens 20092. Van den Heuvel H, Heutinck KM, van der Meer-Prins EP, et al. Detection of Virus-Specific CD8+ T Cells With Cross-Reactivity

Against Alloantigens: Potency and Flaws of Present Experimental Methods. Transplantation Direct 20153. Rowntree L, Kotsimbos T, Mifsud N, et al. Deciphering the clinical relevance of allo-human leukocyte antigen cross-reactivity in

mediating alloimmunity following transplantation. Current Opinion in Organ Transplantation. 2016;21(1):29-39.

MethodsManipulating TCR into pMIG vector4X TCR sequences were analysed from 2 donors; lungtransplant recipient (LTR) 54.1/54.2 and 119.2/119.2a

1. The TCR constructs and pMIGII vector weredigested using restriction enzymes EcoRIand BglII to create ‘sticky ends’

2. The TCRs were then ligated into the vector(containing ampicillin resistance and GFPtag) and transformed into DH5α competentE.coli cells to amplify and purify DNA

3. The DNA was isolated from selectedcolonies for sequencing. If the sequence wascorrect, the plasmid was used for retroviraltransduction into the SKW3.hCD8 cells.

IntroductionFrom the first encounter with an antigen our immune system moulds specific T cellsto establish a memory pool capable of defending the individual from subsequentattack. In some cases, memory T cells whilst specific for the original antigenpresented by their own human leukocyte antigen (HLA), can also recognisealternative unrelated HLA-antigen complexes; termed heterologous immunity.

Here we examine the ability ofcertain virus-specific memory Tcells to cross-react with allogenicHLA complexes, such as observedin the setting of solid organtransplantation. Memory CD8+ Tcells from lung transplantrecipients were identified asspecific for HLA-B*07:02presenting the Epstein Barr Virusepitope EBVRPP and cross-reactivewith HLA-B*40:02.Aims

• To confirm the cross-reactivity of this TCR model by expressing the TCR in a cellline (SKW3.hCD8) in order to perform functional tests

• using stimulator cell lines expressing the cognate (HLA-B*07:02 with and withoutthe EBVRPP peptide) and cross-reactive (HLA-B*40:02) HLAs

• and measuring activation of the SKW3.hCD8.TCR cells by CD69 expression on flowcytometry.

Figure 2: pMIGII plasmid retroviral vectormap adapted from Holst, Nature Protocols2006; 1:406 figure 2a.

Surface staining to confirm expression of HLA/TCR

• SKW3.hCD8 cells were stained with conjugated antibodies PECy7 CD3 andPerCPCy5.5 CD8 to confirm expression of TCR.

• The two stimulator cell lines (K562 (SAL) and C1R) were stained with primaryantibodies ME-1 (specific for HLA-B7) and Bw6 (specific for a serological group ofHLA-B alleles) to confirm HLA expression. Bw6+ ME-1+ indicated HLA-B7expression, Bw6+ ME-1- is indicative of HLA-B40 expression.

Gabrielle Barran 150119742

[email protected]

Results

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MEDIA CD3 CD28 K562 SAL B7 SAL B7/RPP SAL B4001 SAL B4002 C1R C1R B7 C1R B7/RPP C1R B4002

Fold

ch

ange

in M

FI

Stimulation conditions

Change in Mean Fluorescence Intensity (MFI) of activation marker CD69

SKW3. hCD8αβ LTR117 SKW3. hCD8αβ LTR5

ConclusionWe did manage to show cross reactivity within the SALcell line as the B4002 CD69 MFI is greater than that of theB7 alone and parental (K562) by over 4 fold However, theactivation in the C1R cell line has to be disregarded dueto the B7 alone having a greater response.This does fortunately ask a different question: is thepeptide of importance narrowed down to one cell line?

DiscussionThis step within the project has confirmed cross-recognition, however, further investigations are neededto establish the specific peptide being presented by thealloreactive HLA and the immune response to thisrecognition (whether or not the target cell is destroyed)in order to bring this investigation closer to clinicalapplications.

Figure 5: all samples displayed are from theCD8 (PerCP Cy55+) and CD3 (PE Cy7+) subset

Figure 3 (below): Gating was set up on the + control to show to steps of analysis by flow cytometry

Figure 4

Figure 1 SAL B4001

SAL B4002

SAL B7/RPP

SAL B7

K562

CD3 CD28

MEDIA

Level of CD69 upregulation was used to measure activation; media alone was usedas a negative control and CD3 CD28 was used as a non-specific activator for apositive control. Two different cell lines were tested each expressing three differentHLAs + parental alone. All conditions were compared on a histogram (figure 5) andconverted to a graph (figure 4) showing a fold increase in mean fluorescenceintensity from the media alone stimulation condition.