fig 8.19 homework #2 is due 10/18 bonus #1 is due 10/25 weekly quiz online each thursday, due each...

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Fig 8.19 •Homework #2 is due 10/18 •Bonus #1 is due 10/25 •Weekly quiz online each Thursday, due each Tuesday

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Page 1: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

Fig 8.19

•Homework #2 is due 10/18

•Bonus #1 is due 10/25

•Weekly quiz online each Thursday, due each Tuesday

Page 2: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

Fig 16.1

Gene Expression is controlled at all of these steps:•DNA packaging•Transcription•RNA processing and transport•RNA degradation•Translation•Post-translational

Page 3: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

C. elegans is commonly used to study development

Page 4: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

C. elegans development

Page 5: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

C. elegans mutants with cells that do not develop properly.

Fig 12.25 and

Page 6: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

C. elegans mutants with cells that do not develop properly.

The product of these genes was found to be RNA?

Page 7: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

Cell vol. 116,281-297 2004

MicroRNAs (miRNA) are ~22nt RNAs that play important regulatory roles

Page 8: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

How do microRNAs control gene expression?

miRNA expressed

miRNA processed to ~22nt RNA

Mature miRNA

Page 9: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

A processed mRNA ready for translation:microRNAs inhibit translation by binding to the 3’ end of mRNA

microRNA bind to 3’-UTR

5’-UTR3’-UTR

Page 10: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

miRNA expressed

miRNA processed to ~22nt RNA

Mature miRNA

the 3’ end with attached microRNA interacts with the 5’ end, blocking translation

Page 11: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

miRNAs can lead to methylation of DNA that

leads to inhibition of transcription

Page 12: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

microRNAs primarily target gene products that function during development

Tbl 1

Page 13: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

PNAS vol. 101 #1 pg 360-365, 2004

tissue specific expression of mouse microRNA

Page 14: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

Silencing RNAs (siRNA) are artificially induced dsRNA

Fig 8.22

Page 15: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

siRNA with exact matches to the target mRNA causes degradation of the mRNA

Fig 8.21

Page 16: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

microRNA siRNA

Translation inhibited mRNA degraded

Page 17: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

Fig 16.1

Gene Expression is controlled at all of these steps:•DNA packaging•Transcription•RNA processing and transport•RNA degradation•Translation•Post-translational

Page 18: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

Phosphorylation and dephosphorylation of proteins can change activity

Fig 9.21

Page 19: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

Ubiquitinization targets proteins for degradation

Fig 9.23

Page 20: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

All protein interactions in an organism compose the interactome

Page 21: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

Some proteins function in the cytoplasm; others need to be transported to various organelles.

Page 22: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

How can proteins be delivered to their appropriate destinations?

Page 23: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

Protein Destinations: secretion or membrane

Page 24: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

• Signal sequences target proteins for secretion

Fig 9.24

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Translation of secreted proteins

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Translation of membrane bound proteins

Page 27: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

Translation of secreted or membrane bound proteins

This step determines secretion or membrane bound.

Page 28: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

Protein Destinations: nucleus Signal anywhere in protein, Translation in cytoplasm,Signal not removed

Page 29: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

Protein Destinations: mitochondria or chloroplast

Signal translated first, Translation in cytoplasm, Signal removed

Page 30: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

Protein Destinations: signals in protein determine destination

Page 31: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

Development: differentiating cells to become an organism

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Page 33: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

Cells function differently because they express differentgenes.

Page 34: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

The proper control of gene expression is critical for proper development.

Page 35: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

So development in animals is one way.

Page 36: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

Inverse relationship between smoking and weight: more smoking : less weight

Page 37: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

Effect of smoking on fetal development and how that can affect adults

Page 38: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

Adults exposed to smoke as fetuses have higher risk of obesity and heart disease

Page 39: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

What is the connection?

Page 40: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

Obesity, Diabetes, Heart Disease, High Blood Pressure, Some Cancers all may have some origins during fetal development.

Page 41: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

Adults metabolism may react to poor nutrition as fetuses…

Adaptation of Thriftiness

or

Catch Up Growth.

Page 42: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

Adults metabolism may react to poor nutrition as fetuses…Adaptation of Thriftiness or Catch Up Growth.

Study of babies born during Dutch famine of 1944-45…

Page 43: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

Adults metabolism may react to poor nutrition as fetuses…Adaptation of Thriftiness or Catch Up Growth.

Study of babies born during Dutch famine of 1944-45…

20 years later found that these babies had higher rates of obesity.

Page 44: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

Adults metabolism may react to poor nutrition as fetuses…Adaptation of Thriftiness or Catch Up Growth.

Study of babies born during Dutch famine of 1944-45…

20 years later found that these babies had higher rates of obesity.

Precise mechanism is not known

Page 45: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

What about smoking?

17,000 births studied and checked at age 16 and 33.

Fetuses exposed to smoking had increased rate of obesity.

Page 46: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

What about smoking?

17,000 births studied and checked at age 16 and 33.

Fetuses exposed to smoking had increased rate of obesity and more smoking meant more obesity.

Page 47: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

What about smoking?

17,000 births studied and checked at age 16 and 33.

Fetuses exposed to smoking had increased rate of obesity and more smoking meant more obesity.

For Mom’s who abstained during pregnancy, no effect on fetus or as adult.

Page 48: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

What about smoking?

17,000 births studied and checked at age 16 and 33.

Fetuses exposed to smoking had increased rate of obesity and more smoking meant more obesity.

Smoking during first trimester had same effect as during whole pregnancy.

Page 49: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

What about smoking?

For diabetes more than 10 cigarettes per day gave a 4 times greater risk of diabetes.

Page 50: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

What about smoking?

Risk of high blood pressure also increases with increased exposure to fetus of smoking during pregnancy

Page 51: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

Why?

Page 52: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

Why?

Nicotine can inhibit hunger and increase energy expenditure.

This can lead to poor fetal nutrition.

Page 53: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

Why?

Nicotine causes constriction of blood vessels, and may limit blood flow to the fetus.

Page 54: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

AAL 38.8

Mammalian circulation

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Nicotine causes blood vessels to constrict

Page 56: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

Why?

CO in blood decreases delivery of O2 to fetus.

Page 57: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

Why?

These are all indirect affects…

Nicotine can inhibit hunger and increase energy expenditure.

Nicotine causes constriction of blood vessels, and may limit blood flow to the fetus.

CO in blood decreases delivery of O2 to fetus.

Page 58: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

Why?

Nicotine and other toxins in smoke may directly affect hormones that direct fetal development.

Page 59: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

Hormones are molecules produced in one cell and signal another.

Page 60: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

Why?

Nicotine and other toxins in smoke may directly affect hormones that direct fetal development.

Including hormones that direct brain development.

Page 61: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

So,

Smoking during pregnancy may have indirect and/or direct affects on fetal development, and these affects may manifest themselves in adults.

Page 62: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

Correlation of weight (BMI) %

Biological siblings 34

Parents and children living together 26

Identical twins reared together 80

Fraternal twins reared together 43

Identical twins reared apart 72

Adopted children and parents 4

Unrelated children living together 1

Correlation of weight and relatedness

Page 63: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

Nature and Nurture:

Are traits coded for by genes fixed while traits coded for by the environment are under our control?

Page 64: Fig 8.19 Homework #2 is due 10/18 Bonus #1 is due 10/25 Weekly quiz online each Thursday, due each Tuesday

Fig 8.19

•Homework #2 is due 10/18

•Bonus #1 is due 10/25

•Weekly quiz online each Thursday, due each Tuesday