evolution – evidence and types of data. natural selection industrial melanism

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Evolution evidence and types of data

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Page 1: Evolution – evidence and types of data. Natural Selection Industrial melanism

Evolution – evidence and types of data

Page 2: Evolution – evidence and types of data. Natural Selection Industrial melanism

Natural Selection

Industrial melanism

Page 3: Evolution – evidence and types of data. Natural Selection Industrial melanism

The Fossil Record

Geologic strata in the Grand Canyon, Arizona

Page 4: Evolution – evidence and types of data. Natural Selection Industrial melanism

Green River Formation, WY and UT.

Eocene in age

The Fossil Record

Page 5: Evolution – evidence and types of data. Natural Selection Industrial melanism

The Fossil RecordTimelines

Page 6: Evolution – evidence and types of data. Natural Selection Industrial melanism

Fossils: Links between groups

Page 7: Evolution – evidence and types of data. Natural Selection Industrial melanism

Major Transitions: from Fish to Amphibian

Lobefin fish

Early amphibian

Eustenopteron

Ichthyostega

Fossil Record

Page 8: Evolution – evidence and types of data. Natural Selection Industrial melanism

Major Transitions: from Fish to Amphibian

Acanthostega

Amphibian-like fish

The Link

Fish

Amphibian

Page 9: Evolution – evidence and types of data. Natural Selection Industrial melanism

Ichthyostega

Acanthostega Eustenopteron

The FossilsAll represented in the fossil record

Page 10: Evolution – evidence and types of data. Natural Selection Industrial melanism

Comparative Anatomy

Homologous structures

Page 11: Evolution – evidence and types of data. Natural Selection Industrial melanism

Comparative Anatomy

Analogous structures

Page 12: Evolution – evidence and types of data. Natural Selection Industrial melanism

Vestigial structure

Comparative Anatomy

Page 13: Evolution – evidence and types of data. Natural Selection Industrial melanism

Human appendix

Vestigial structure

Comparative Anatomy

Page 14: Evolution – evidence and types of data. Natural Selection Industrial melanism

Comparative Embryology

Page 15: Evolution – evidence and types of data. Natural Selection Industrial melanism

Molecular model of hemoglobin

Molecular Record

Page 16: Evolution – evidence and types of data. Natural Selection Industrial melanism

Molecular Record

Page 17: Evolution – evidence and types of data. Natural Selection Industrial melanism

A phylogeny or cladogram

Page 18: Evolution – evidence and types of data. Natural Selection Industrial melanism

The mechanics of change - Origin of Species and Speciation

Page 19: Evolution – evidence and types of data. Natural Selection Industrial melanism

What is a species?

Page 20: Evolution – evidence and types of data. Natural Selection Industrial melanism

Biological Species Concept (BSC)

Page 21: Evolution – evidence and types of data. Natural Selection Industrial melanism

BSC is about genetic Isolation

Genome = Individual

Gene pool = Population

Haemulon flavolineatum

Page 22: Evolution – evidence and types of data. Natural Selection Industrial melanism

(Canis latrans x Canis familiaris)

CoydogCoyote x domestic dog

Page 23: Evolution – evidence and types of data. Natural Selection Industrial melanism

Isolating Mechanisms

Premating Isolating mechanisms

Page 24: Evolution – evidence and types of data. Natural Selection Industrial melanism

Isolating Mechanisms

Premating Isolating mechanisms

Postmating Isolating mechanisms

Page 25: Evolution – evidence and types of data. Natural Selection Industrial melanism

Premating Isolating mechanism

Habitat Isolation

Page 26: Evolution – evidence and types of data. Natural Selection Industrial melanism

Canis rufus

(red wolf)

Canis latrans

(coyote)

Habitat Isolation

Page 27: Evolution – evidence and types of data. Natural Selection Industrial melanism

Premating Isolating mechanism

Behavioral Isolation

Page 28: Evolution – evidence and types of data. Natural Selection Industrial melanism

Premating Isolating mechanism

Courtship coloration or displays in many animals

Behavioral Isolation

Colisa lalia (male)

(from India)

Page 29: Evolution – evidence and types of data. Natural Selection Industrial melanism

Premating Isolating mechanism

Behavioral Isolation

Page 30: Evolution – evidence and types of data. Natural Selection Industrial melanism

Premating Isolating mechanism

Temporal Isolation

Page 31: Evolution – evidence and types of data. Natural Selection Industrial melanism

Premating Isolating mechanism

Spawning marine sponge --

may involve temporal isolation

Page 32: Evolution – evidence and types of data. Natural Selection Industrial melanism

Premating Isolating mechanism

Mechanical Isolation

Page 33: Evolution – evidence and types of data. Natural Selection Industrial melanism

Premating Isolating mechanism

Gametic Isolation

Page 34: Evolution – evidence and types of data. Natural Selection Industrial melanism

Genetic isolation occurs in closely related species of sea urchins

Strongylocentrotus franciscanus

Strongylocentrotus purpuratus

Page 35: Evolution – evidence and types of data. Natural Selection Industrial melanism

Postmating Isolating

mechanisms

Page 36: Evolution – evidence and types of data. Natural Selection Industrial melanism

Postmating Isolating mechanism

Reduced hybrid viability

Page 37: Evolution – evidence and types of data. Natural Selection Industrial melanism

Postmating Isolating mechanismReduced hybrid fertility

Donkey (male)

Horse (female)

The hybrid: mule

This animal has no fitness.

Page 38: Evolution – evidence and types of data. Natural Selection Industrial melanism

“That’s about as useful as a pair of breedin’ mules”

Page 39: Evolution – evidence and types of data. Natural Selection Industrial melanism

Speciation

Page 40: Evolution – evidence and types of data. Natural Selection Industrial melanism

Speciation

Isolation

then

Divergence

Page 41: Evolution – evidence and types of data. Natural Selection Industrial melanism

Two Speciation Models

Allopatric speciation

Page 42: Evolution – evidence and types of data. Natural Selection Industrial melanism

Two Speciation Models

Sympatric speciation

Page 43: Evolution – evidence and types of data. Natural Selection Industrial melanism

Allopatric speciationA physical barrier creates isolation

Page 44: Evolution – evidence and types of data. Natural Selection Industrial melanism

Sciurus aberti kaibabensis

(North Rim, Grand Canyon)

Sciurus aberti aberti

(South Rim, Grand Canyon)

Page 45: Evolution – evidence and types of data. Natural Selection Industrial melanism

Allopatric Speciation: Islands

Page 46: Evolution – evidence and types of data. Natural Selection Industrial melanism

Darwin’s Finches

Galapagos Islands

Page 47: Evolution – evidence and types of data. Natural Selection Industrial melanism

Sympatric Speciation

Requires reproductive isolation WITHOUT

physical barrier

Is this possible?

Page 48: Evolution – evidence and types of data. Natural Selection Industrial melanism

Sympatric Speciation

Lake Mbo, Cameroun, Central Africa

Lake Mbo endemic cichlid fishes – 15 species

How did isolation occur?

Page 49: Evolution – evidence and types of data. Natural Selection Industrial melanism

Sympatric Speciation

Ophrys lutea Ophrys sicula

Two sympatric European orchids with two different and highly specialized pollinators.

Page 50: Evolution – evidence and types of data. Natural Selection Industrial melanism

Sympatric Speciation?

Lake Victoria, East Africa

Page 51: Evolution – evidence and types of data. Natural Selection Industrial melanism

Sympatric Speciation?Lake Victoria, East Africa

Very large radiation of endemic cichlid fishes

Page 52: Evolution – evidence and types of data. Natural Selection Industrial melanism

Adaptive Radiation

Page 53: Evolution – evidence and types of data. Natural Selection Industrial melanism
Page 54: Evolution – evidence and types of data. Natural Selection Industrial melanism

Hawaiian honeycreepers

Adaptive Radiation

Page 55: Evolution – evidence and types of data. Natural Selection Industrial melanism

Cichlid fishes in Great Lakes East Africa

Adaptive Radiation

Page 56: Evolution – evidence and types of data. Natural Selection Industrial melanism

Adaptive Radiation

Cichlid fishes in Great Lakes East Africa

Page 57: Evolution – evidence and types of data. Natural Selection Industrial melanism

Tertiary Period – 65 million years ago (mya)

Adaptive Radiation

Page 58: Evolution – evidence and types of data. Natural Selection Industrial melanism

Mammal Radiation

Adaptive Radiation

Page 59: Evolution – evidence and types of data. Natural Selection Industrial melanism

Biodiversity

Page 60: Evolution – evidence and types of data. Natural Selection Industrial melanism

Biodiversity

Page 61: Evolution – evidence and types of data. Natural Selection Industrial melanism

Extinction

Page 62: Evolution – evidence and types of data. Natural Selection Industrial melanism

Small population size

Devil’s Hole Pupfish

Cyprinodon diabolis

Page 63: Evolution – evidence and types of data. Natural Selection Industrial melanism

Extreme specialization

Koala bear

California condor

an orchid

Page 64: Evolution – evidence and types of data. Natural Selection Industrial melanism

Continental Drift and extinctions

Page 65: Evolution – evidence and types of data. Natural Selection Industrial melanism

Humans and Extinction

Page 66: Evolution – evidence and types of data. Natural Selection Industrial melanism

Steller' Sea Cow (Hydrodamalis gigas)

Page 67: Evolution – evidence and types of data. Natural Selection Industrial melanism
Page 68: Evolution – evidence and types of data. Natural Selection Industrial melanism
Page 69: Evolution – evidence and types of data. Natural Selection Industrial melanism

Pleistocene megafauna

Page 70: Evolution – evidence and types of data. Natural Selection Industrial melanism

Climate Change

Page 71: Evolution – evidence and types of data. Natural Selection Industrial melanism

Lake Victoria, East Africa

Humans and extinction

Page 72: Evolution – evidence and types of data. Natural Selection Industrial melanism

Lake Victoria cichlids – 100s of species

Page 73: Evolution – evidence and types of data. Natural Selection Industrial melanism

Add an introduced top carnivore …..

Nile perch

(Lates niloticus)

the result …….

Page 74: Evolution – evidence and types of data. Natural Selection Industrial melanism

………extinction.

Only habitat for most surviving Lake Victoria cichlids

Page 75: Evolution – evidence and types of data. Natural Selection Industrial melanism

Lake Victoria

Lake Tanganyika

Lake Malawi

Page 76: Evolution – evidence and types of data. Natural Selection Industrial melanism

Ivory-billed woodpecker (Campephilus principalis)

Extinction?

Page 77: Evolution – evidence and types of data. Natural Selection Industrial melanism

Classification and how we name things

Page 78: Evolution – evidence and types of data. Natural Selection Industrial melanism

Carl Linnaeus (1707-1778)

Father of modern classification

Page 79: Evolution – evidence and types of data. Natural Selection Industrial melanism

Carl Linnaeus1758

Foundations of Modern Classification

Page 80: Evolution – evidence and types of data. Natural Selection Industrial melanism

1738

Foundations of Modern Classification

18th Century

Page 81: Evolution – evidence and types of data. Natural Selection Industrial melanism

Percina pantherina

Binomial names

Carnegiea gigantea

Megaptera novaeangliae

Cyprinella lutrensis

Page 82: Evolution – evidence and types of data. Natural Selection Industrial melanism

Homo sapiens L.

Binomial names

Page 83: Evolution – evidence and types of data. Natural Selection Industrial melanism

Taxonomy and

Systematics

are the sciences of

Classification

Page 84: Evolution – evidence and types of data. Natural Selection Industrial melanism

…books everybody should have in their library

Page 85: Evolution – evidence and types of data. Natural Selection Industrial melanism

Common names are rarely standard and not international

“Corn”

“Bears”

Page 86: Evolution – evidence and types of data. Natural Selection Industrial melanism

Sciurus carolinensis

Page 87: Evolution – evidence and types of data. Natural Selection Industrial melanism

Domain Eukarya

Kingdom Animalia

Phylum Chordata

Class Osteichthyes

Family Salmonidae

Order Salmoniformes

Genus & species

Oncorhynchus mykiss

Page 88: Evolution – evidence and types of data. Natural Selection Industrial melanism

Classification – taxonomic characters

Page 89: Evolution – evidence and types of data. Natural Selection Industrial melanism

Classification – taxonomic characters

Page 90: Evolution – evidence and types of data. Natural Selection Industrial melanism

Phylogenetics

Haeckel (1879)

Page 91: Evolution – evidence and types of data. Natural Selection Industrial melanism

Family Anabantidae

African climbing perches

Page 92: Evolution – evidence and types of data. Natural Selection Industrial melanism

Phylogeny for the Anabantidae

Page 93: Evolution – evidence and types of data. Natural Selection Industrial melanism

Skeletal features

Anabantidae

Page 94: Evolution – evidence and types of data. Natural Selection Industrial melanism

Anabantid Jaw Structure

Page 95: Evolution – evidence and types of data. Natural Selection Industrial melanism

Hypothesis of evolutionary relationships

Page 96: Evolution – evidence and types of data. Natural Selection Industrial melanism

Classification and Phylogeny

Page 97: Evolution – evidence and types of data. Natural Selection Industrial melanism

A dinosaur phylogeny….

Page 98: Evolution – evidence and types of data. Natural Selection Industrial melanism

Classification on a very large scale

Page 99: Evolution – evidence and types of data. Natural Selection Industrial melanism

Relationships among the three domains

Page 100: Evolution – evidence and types of data. Natural Selection Industrial melanism

Relationships among the three domains

Page 101: Evolution – evidence and types of data. Natural Selection Industrial melanism

Domain Archaea

Page 102: Evolution – evidence and types of data. Natural Selection Industrial melanism

Domain Bacteria

Page 103: Evolution – evidence and types of data. Natural Selection Industrial melanism

Domain Eukarya

Page 104: Evolution – evidence and types of data. Natural Selection Industrial melanism

Biodiversity and Classification

Page 105: Evolution – evidence and types of data. Natural Selection Industrial melanism
Page 106: Evolution – evidence and types of data. Natural Selection Industrial melanism
Page 107: Evolution – evidence and types of data. Natural Selection Industrial melanism

Family Malapteruridae

African electric catfishes

Page 108: Evolution – evidence and types of data. Natural Selection Industrial melanism

“unsightly” --- G. Bell-Cross

Page 109: Evolution – evidence and types of data. Natural Selection Industrial melanism

“unpleasant” --- P.H. Greenwood

Page 110: Evolution – evidence and types of data. Natural Selection Industrial melanism

“repellent” and “bloated” --- P.B.N. Jackson

Page 111: Evolution – evidence and types of data. Natural Selection Industrial melanism

“…repulsive….barely needs description” --- R. A. Jubb

Page 112: Evolution – evidence and types of data. Natural Selection Industrial melanism

“filthy, flabby, nasty” and “…like a big fat slug” --- H. Copley

Page 113: Evolution – evidence and types of data. Natural Selection Industrial melanism

“…in every respect a revolting fish” --- H. Copley

Page 114: Evolution – evidence and types of data. Natural Selection Industrial melanism
Page 115: Evolution – evidence and types of data. Natural Selection Industrial melanism

Fifth Dynasty tomb relief at Ti, Egypt

Page 116: Evolution – evidence and types of data. Natural Selection Industrial melanism

Electric CatfishesServing medicine ….

Page 117: Evolution – evidence and types of data. Natural Selection Industrial melanism

Cavendish

Electric Catfishes

Serving science

Galvani Volta

Serving medicine ….

Page 118: Evolution – evidence and types of data. Natural Selection Industrial melanism
Page 119: Evolution – evidence and types of data. Natural Selection Industrial melanism

Family Malapteruridae

Page 120: Evolution – evidence and types of data. Natural Selection Industrial melanism

1990s –

Three species recognized

Page 121: Evolution – evidence and types of data. Natural Selection Industrial melanism

M. minjiriya

M. microstoma

Genus Malapterurus

M. electricus

Page 122: Evolution – evidence and types of data. Natural Selection Industrial melanism

M. minjiriya

M. microstoma

Genus Malapterurus

1969

1976

1789

M. electricus

Page 123: Evolution – evidence and types of data. Natural Selection Industrial melanism

Two distributions ill-defined …..

Page 124: Evolution – evidence and types of data. Natural Selection Industrial melanism

…with an impossibly vast distribution for M. electricus

Page 125: Evolution – evidence and types of data. Natural Selection Industrial melanism

Distributions of organisms follow patterns

Page 126: Evolution – evidence and types of data. Natural Selection Industrial melanism

Systematic Ichthyology --- how is it done?

Page 127: Evolution – evidence and types of data. Natural Selection Industrial melanism
Page 128: Evolution – evidence and types of data. Natural Selection Industrial melanism

Royal Museum of Central Africa

Tervuren, Belgium

Page 129: Evolution – evidence and types of data. Natural Selection Industrial melanism

Laboratory of Systematic Ichthyology

Page 130: Evolution – evidence and types of data. Natural Selection Industrial melanism

Characters

Page 131: Evolution – evidence and types of data. Natural Selection Industrial melanism

DATA

Page 132: Evolution – evidence and types of data. Natural Selection Industrial melanism

Standard len gth (mm)

-20

20

60

100

140

180

220

260

300

0 50 100 150 200 250 300 350 400

PC 1

-2.5

-1.5

-0.5

0.5

1.5

2.5

-2.5 -1.5 -0.5 0.5 1.5 2.5 3.5

1.8

93.7

Stan dard leng th (mm)

0

1

2

3

4

5

6

7

8

9

10

11

12

13

14

35 - 40 40 - 45 45 - 50 50 - 55 55 - 60 60 - 65 65 - 70 70 - 75 75

Data explored, patterns identified…..

Hypotheses formulated

Page 133: Evolution – evidence and types of data. Natural Selection Industrial melanism

Flanders

Page 134: Evolution – evidence and types of data. Natural Selection Industrial melanism

Flanders

Page 135: Evolution – evidence and types of data. Natural Selection Industrial melanism

Paris

Page 136: Evolution – evidence and types of data. Natural Selection Industrial melanism

The Result ---

Not three species …

Page 137: Evolution – evidence and types of data. Natural Selection Industrial melanism

19 species

Page 138: Evolution – evidence and types of data. Natural Selection Industrial melanism

Not three species……

Page 139: Evolution – evidence and types of data. Natural Selection Industrial melanism

but 19 species

Page 140: Evolution – evidence and types of data. Natural Selection Industrial melanism

Nilo-Sudanic Region

Page 141: Evolution – evidence and types of data. Natural Selection Industrial melanism

M. electricus

Page 142: Evolution – evidence and types of data. Natural Selection Industrial melanism

West African Rain Forests

Page 143: Evolution – evidence and types of data. Natural Selection Industrial melanism

M. teugelsi M. stiassnyae

M. barbatus

M. punctatusM. thysi

West African Rain Forests

Page 144: Evolution – evidence and types of data. Natural Selection Industrial melanism

Central African Rain Forests

Page 145: Evolution – evidence and types of data. Natural Selection Industrial melanism

M. gossei

M. melanochir

M. microstoma

M. polli

Genus Malapterurus

Page 146: Evolution – evidence and types of data. Natural Selection Industrial melanism

P. caudivittatus

P. parvus

P. cryptus

Genus Paradoxoglanis

Page 147: Evolution – evidence and types of data. Natural Selection Industrial melanism

P. caudivittatus

P. parvus

P. cryptus

(Genus Paradoxoglanis)

Mini-Electric Catfishes

Page 148: Evolution – evidence and types of data. Natural Selection Industrial melanism

Not three species

Page 149: Evolution – evidence and types of data. Natural Selection Industrial melanism

19 species

Page 150: Evolution – evidence and types of data. Natural Selection Industrial melanism

19 species …

…in 2 genera

Page 151: Evolution – evidence and types of data. Natural Selection Industrial melanism

Published Research