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Enzymes

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Page 1: Enzymes. Enzymes – General properties All enzymes are proteins that function as biological catalysts ◦ They are essential for reactions to occur in living

Enzymes

Page 2: Enzymes. Enzymes – General properties All enzymes are proteins that function as biological catalysts ◦ They are essential for reactions to occur in living

Enzymes – General properties

All enzymes are proteins that function as biological catalysts◦ They are essential for reactions to occur in living (and

dying) cells◦ They can have a dramatic impact on the quality

deterioration of many foods◦ They can be used to perform positive reactions in food

and beverage processing (also textile, leather and pharmaceutical industry) Have specific ability to convert a particular substance into

a particular product Very rapid action Only need small amount Can easily control them by adjusting their environment,

e.g. pH, T, concentration….. They are all natural and non-toxic

Page 3: Enzymes. Enzymes – General properties All enzymes are proteins that function as biological catalysts ◦ They are essential for reactions to occur in living

Change in environment

Enzymes have one (or more) active sites in their structure that have great specificity for certain substrates (bind only to these) and catalyze their transformation into specific products

Enzymes – General properties

E E-S

E-S#E + P

Binding step

Catalytic step

Page 5: Enzymes. Enzymes – General properties All enzymes are proteins that function as biological catalysts ◦ They are essential for reactions to occur in living

Enzymes – General properties Activation energy (Ea) – the minimum energy that reacting molecules must

acquire before they will be converted to the reaction products The reason enzymes are able to speed up chemical reactions so much

comes from their ability to bind to their substrates with very high specificity and significantly lower the activation energy (Ea) of the reaction converting a substrate to a product◦ Allows biological reactions to occur in mild conditions

Speed up reactions by 105-108 compared to chemical catalysts; 108-1020 compared to uncatalyzed reactions

Fre

e e

nerg

y

Progress of reaction

No enzyme

Enzyme

E + S

E-S

E + P

Ea

Ea

A C

A C

E EA

Page 6: Enzymes. Enzymes – General properties All enzymes are proteins that function as biological catalysts ◦ They are essential for reactions to occur in living

Enzymes – General properties

There are six main types/groups of enzymes classified based on their chemical reaction mechanism1. Oxidoreductases

Catalyze oxidations or reductions of substrates

Some important food reaction examples: Lipid oxidation – lipoxygenase (adds an oxygen on fatty acids)

Browning – polyphenol oxidase (oxidizes phenols in food)

2. Transferases Catalyze a shift of a functional group from a

donor to an acceptor substrate Not so important in foods

Page 7: Enzymes. Enzymes – General properties All enzymes are proteins that function as biological catalysts ◦ They are essential for reactions to occur in living

Enzymes – General properties

3. Hydrolases Catalyze the hydrolysis (with help of water)

of substrates (i.e. breaking of bonds) By far the most important enzymes with

respect to food quality and use in food processing

Some important food reaction examples: Texture, carbohydrate modification – e.g. amylases (cleave glycosidic bonds) and pectinases (act on several groups/bonds)

Texture, protein modification – proteases (cleave the peptide bond)

Hydrolytic rancidity, fat crystallization modification – lipases (cleave ester bonds)

Page 8: Enzymes. Enzymes – General properties All enzymes are proteins that function as biological catalysts ◦ They are essential for reactions to occur in living

Enzymes – General properties

4. Lyases Catalyze the removal or addition of chemical

groups to substrates Not so important in foods

5. Isomerases Catalyze intramolecular rearrangements An important food reaction example:

Sweetness (Glu Fru) – glucose isomerase (converts aldose to ketose)

6. Ligases Catalyze joining of two molecules Not so important in foods

Page 9: Enzymes. Enzymes – General properties All enzymes are proteins that function as biological catalysts ◦ They are essential for reactions to occur in living

Enzymes – General properties

Factors affecting enzyme activity – [substrate]

1. Enzyme and substrate concentration◦ When substrate concentration is kept constant

the enzyme reaction is proportional to the amount of enzyme (i.e. doubling enzyme will double the speed of the reaction) up to a certain limit

Here you start to have more enzyme than substrate and rate starts to level off (substrate limiting factor)

There is no added benefit for a food operation to have too much enzyme ($$$).

That is why we want to study the ideal concentration to work at

Page 10: Enzymes. Enzymes – General properties All enzymes are proteins that function as biological catalysts ◦ They are essential for reactions to occur in living

Chemical kinetics

-20

0

20

40

60

80

100

120

0 5 10 15 20 25 30 35 40

Change

Time

S 1st Order Reactionv = k [S]

P

Page 11: Enzymes. Enzymes – General properties All enzymes are proteins that function as biological catalysts ◦ They are essential for reactions to occur in living

Enzymes – General properties

o Increasing the substrate concentration under fixed enzyme concentration leads to a non-linear increase in reaction velocity that can be explained by the formation of the Enzyme-Substrate complex:

o E + S ↔ E-S →E + P

o This reaction curve is shared by most enzyme and gives us very useful information on the activity of the enzyme and the affinity for its substrateo Vmax gives us the maximum velocity

that the enzyme can produce (under the conditions tested) – the higher the faster

o Km (determined as ½ Vmax) tells us the affinity of the enzyme for its substrate

o Vmax/Km = catalytic efficiency (higher number means more efficient)

k1 k2

k-1

Vo  = Vmax[ S] oKm  + [S ]o  

Michaelis-Menten equation

Page 12: Enzymes. Enzymes – General properties All enzymes are proteins that function as biological catalysts ◦ They are essential for reactions to occur in living

A

A B

Enzymes – General properties

At low [S][E] and [S] determine the rate

At high [S][E] determines rate

Page 13: Enzymes. Enzymes – General properties All enzymes are proteins that function as biological catalysts ◦ They are essential for reactions to occur in living

Enzymes – General properties

2. Temperature◦ Enzyme reactions increase

with temperature up to a point and then activity declines as the enzyme becomes denatured

◦ Different enzymes have different temperature optima's (the point when max activity is)

◦ It is important to determine this to be able to predict what type of thermal treatment you need in processing to inactivate undesirable enzymes

Page 14: Enzymes. Enzymes – General properties All enzymes are proteins that function as biological catalysts ◦ They are essential for reactions to occur in living

Enzymes – General properties

3. pH◦ All enzymes have a certain narrow range of pH where

they perform best Usually most active between pH 4.5 - 8 Some active at very low (e.g. pepsin) or high pH

◦ Extremes of pH can affect the enzyme by denaturing it (remember it is a protein) or affecting the charge of critical amino acids in its active site (or charge on the substrate)

◦ For this reason pH control of foods with undesirable enzymes is important

pH1 12

Activity

PepsinTrypsin

Page 15: Enzymes. Enzymes – General properties All enzymes are proteins that function as biological catalysts ◦ They are essential for reactions to occur in living

Enzymes – General properties

4. Water activity◦ Water can influence an enzyme in many ways

It can be critical for the SP reaction (e.g. hydrolysis) It can be critical to solubilize the substrate and product It can be critical for the flexibility of the enzyme structure

◦ Water activity can be varied in foods to slow down enzymatic activity

aw

Activity

0 1

Enzyme 2Enzyme 1

Page 16: Enzymes. Enzymes – General properties All enzymes are proteins that function as biological catalysts ◦ They are essential for reactions to occur in living

Enzymes – General properties

5. Inhibitors◦ We can use chemical compounds to inhibit or slow

down the activity of enzymes1. Competitive inhibitors

Compete with the substrate for the active site Enzyme can only bind to either S (substrate) or I (inhibitor) at

one time2. Non-competitive inhibitors

Bind to enzyme at another site than active site Enzyme can bind to both S and I at the same time

3. Un-competitive inhibitors Can only bind to the E-S complex (the intermediate state) Enzyme binds first to S and then can bind to I

◦ These can be reversible or irreversible◦ Some food use for these but many have flavor, odor,

color and toxicity problems, plus can be very expensive

Page 17: Enzymes. Enzymes – General properties All enzymes are proteins that function as biological catalysts ◦ They are essential for reactions to occur in living

E+S → ES + I → ESI

Page 18: Enzymes. Enzymes – General properties All enzymes are proteins that function as biological catalysts ◦ They are essential for reactions to occur in living
Page 19: Enzymes. Enzymes – General properties All enzymes are proteins that function as biological catalysts ◦ They are essential for reactions to occur in living

Enzymes – Important food enzymes

HYDROLASES They all have in common that they break bonds with

the help of water1. Glycoside hydrolases A) Enzymes that hydrolyze starch (glycosidic bonds)

◦ -amylase Hydrolyses -1-4 glycosidic bonds within starch Products are dextrins, maltose and maltotriose

◦ -amylase Hydrolyses -1-4 glycosidic bonds from the non-reducing end of

starch Product is maltose (if amylose), what about with amylopectin?

◦ Glucoamylase Hydrolyses -1-4 and -1-6 (slower) glycosidic bonds in starch Possible to hydrolyze all the way to glucose

◦ Pullulanase Hydrolyses -1-6 glycosidic bonds in starch (debranching

enzyme) These enzymes are naturally present in the food or are

found in microorganisms that are added to food

Page 20: Enzymes. Enzymes – General properties All enzymes are proteins that function as biological catalysts ◦ They are essential for reactions to occur in living

Enzymes – Important food enzymes

Food importance of the glycoside hydrolases

Corn syrup production◦ Using a cocktail of

enzymes starch can be converted to a glucose syrup (dextrose- glc)

◦ Start with -amylase to break amylose and amylopectin to smaller units

◦ Then use glucoamylase to break down to glucose

◦ If maltose is desired use -amylase and pullulanase

Page 21: Enzymes. Enzymes – General properties All enzymes are proteins that function as biological catalysts ◦ They are essential for reactions to occur in living

Enzymes – Important food enzymes

Baking◦ -amylases are important to “dextrinize” the disrupted

starch granules (rupture during milling). Dextrins are then hydrolyzed to maltose by -amylase gives fermentable sugar for yeast to produce CO2 (essential for rising of the bread)

◦ On baking (first few minutes around 70 °C) there is further action of the amylases on the gelatinized starch plays an important role in the final texture and quality of bread

◦ Amylases added to bakery products can minimize staling◦ Need to add -amylases to some flours (wheat harvested

in dry climates) – doesn’t contain enough natural -amylase

Brewing◦ High level of amylases in barley malt (no need to add

more)◦ During mashing (milled barley malt and water at ~ 50 °C)

amylases hydrolyze starch to give maltose for yeast to utilize and produce CO2 and ethanol

Page 22: Enzymes. Enzymes – General properties All enzymes are proteins that function as biological catalysts ◦ They are essential for reactions to occur in living

Overview of the Brewing Process

22

Page 23: Enzymes. Enzymes – General properties All enzymes are proteins that function as biological catalysts ◦ They are essential for reactions to occur in living

Enzymes – Important food enzymes

B) Invertase◦ An enzyme that hydrolyzes the glycosidic bond between

glucose and fructose in sucrose Results in invert sugar (free glu and fru) Popular in the confectionary industry because invert

sugar is sweeter than sucrose and has less tendency to crystallize

Glucose has sweetness index value of 70, Fructose 170, Sucrose 100, Lactose 16 Popular in soft candy fillings

C) Lactase◦ An enzyme that hydrolyses the glycosidic bond between

galactose and glucose in lactose Increases sweetness and solubility of the sugar Done in the dairy industry to minimize crystallization in

ice cream and to produce lactose free products

Page 24: Enzymes. Enzymes – General properties All enzymes are proteins that function as biological catalysts ◦ They are essential for reactions to occur in living

Enzymes – Important food enzymes

2. PectinasesOccur widely in fruits and vegetables and are

responsible for the degradation of pectic substances◦ Pectin methyl esterase (PME)

Hydrolyze the methyl ester linkages of pectin Causes loss of cloud in citrus juice (big problem)

Converts colloidal pectin to non-colloidal pectin We add this enzyme when clarity is desired (e.g. apple

juice), also has a minor effect on improving juice yield

PME

90C for 1 min

O OO

O O OO

C O O C H 3 C O O H C O O C H 3

O OO

O O OO

C O O C H 3 C O O H C O O C H 3

O OO

O O OO

C O O C H 3 C O O H C O O C H 3

O OO

O O OO

C O O C H 3 C O O H C O O C H 3

O OO

O O OO

C O OH C O OCH3

O

O OO

O O OO

C O OH C O OCH3O

Ca

O OO

O O OO

C O OH C O OCH3

O

O OO

O O OO

C O OH C O OCH3O

Ca

O OO

O O OO

C O OH C O OCH3

O

O OO

O O OO

C O OH C O OCH3O

Ca

O OO

O O OO

C O OH C O OCH3

O

O OO

O O OO

C O OH C O OCH3O

Ca

Page 25: Enzymes. Enzymes – General properties All enzymes are proteins that function as biological catalysts ◦ They are essential for reactions to occur in living
Page 26: Enzymes. Enzymes – General properties All enzymes are proteins that function as biological catalysts ◦ They are essential for reactions to occur in living

Enzymes – Important food enzymes3. Proteases

◦ Enzymes that hydrolyze peptide bonds in proteinsA) Papain

◦ Found in papaya◦ Broad pH (3-11) and temperature stability

For this reason very popular for a variety of food processing applications

1. Used as a meat tenderizer on inferior meat cuts (can also use slice of pineapple on meat)

The enzyme makes its way into the muscle and hydrolyzes primarily connective tissue proteins (collagen etc.) and softens muscle

Have to use low amount to limit extent of proteolysis - prevent liquefaction of muscle

If you mix raw papaya into Jell-O it will not form a gel

Other popular tenderizing enzymes are ficin (from figs), bromelain (from pineapple) and microbial proteases

Microbial proteases (A. oryzae, B. subtilis) preferentially hydrolyze actin and myosin

Page 27: Enzymes. Enzymes – General properties All enzymes are proteins that function as biological catalysts ◦ They are essential for reactions to occur in living

Enzymes – Important food enzymes

2. Papain can also be used to clear turbidity (chill haze) in beer◦ When bottled or canned beer is kept below 10C (50F) a

haze can form Interactions of proteins/polypeptides and tannins in

beer◦ Prevention of this haze formation is called chill-proofing

Protease (papain mostly used) added during post-fermentation maturation to hydrolyze the proteins/polypeptides to prevent large aggregates to form on cooling

Page 28: Enzymes. Enzymes – General properties All enzymes are proteins that function as biological catalysts ◦ They are essential for reactions to occur in living

Enzymes – Important food enzymes

B) Digestive proteases◦ Trypsin & Chymotrypsin

Produced in the pancreas, present in the intestines as well

Can cause quality problems in muscle foods if contamination from intestines occurs (e.g. ground products) over-softening of the meat

Often used to make protein hydrolysates for the food, beverage, and pharmaceutical industry

Most active at pH 7-9 Can undergo autolysis at pH 8 during storage

◦ Pepsin Produced in the mucosal lining of the stomach Very acidic activity optima (pH 1- 3)

Somewhat limits its use Used in cheese making, chillproofing and also in

making protein hydrolysates animal and fertilizer use primarily, some for food

use

Page 29: Enzymes. Enzymes – General properties All enzymes are proteins that function as biological catalysts ◦ They are essential for reactions to occur in living

Enzymes – Important food enzymes

◦ Chymosin (rennin) Essential for the manufacture of good quality cheeses Found in the fourth stomach of suckling calf's (calf rennet) Very expensive and “inhumane” to process, now the

enzyme has been engineered to be produced by microorganisms

Has a very specific activity Hydrolyzes only one bond in к-casein, one of the many

proteins that make up the milk casein protein complex (к-, -, -casein)

This breaks up the casein complex and it aggregates leading to a clot, the first step in cheese production

Other proteases can initiate a milk clot like chymosin, but they would continue casein hydrolysis producing bitter peptides and eventually breakdown of the clot

Page 30: Enzymes. Enzymes – General properties All enzymes are proteins that function as biological catalysts ◦ They are essential for reactions to occur in living

Enzymes – Important food enzymes

C) Microbial proteases◦ Several fungal and bacterial proteases are used in the

food industry◦ Fungal proteases

Some have almost equal ability to form cheese clots like chymosin

A protease cocktail from Aspergillus oryzae is used to partially break down bread proteins (glutens) thus reducing mixing time and making the dough more pliable

Some are added to help with flavor and texture development and speeding up fermentation in fermented dairy products

Fungal proteases can also be used to tenderize meat◦ Bacterial proteases

Subtilisin from Bacillus subtilisin is can be used in combination with papain in beer chillproofing, and for the production of protein hydrolyzates

Page 31: Enzymes. Enzymes – General properties All enzymes are proteins that function as biological catalysts ◦ They are essential for reactions to occur in living

Enzymes – Important food enzymes

4. Lipases◦ Enzymes that hydrolyze bonds between the fatty acids

and the glycerol molecule Hydrolyze triglycerides at the water-oil interface in emulsions

◦ Two classesa) 1,3-lipases: preferentially hydrolyze ester bonds at SN1 and

SN3b) 2-lipases preferentially hydrolyze ester bonds at SN2

Page 32: Enzymes. Enzymes – General properties All enzymes are proteins that function as biological catalysts ◦ They are essential for reactions to occur in living

Enzymes – Important food enzymes

◦ Lipases have a dramatic impact on the quality of food products

A) Lead to hydrolytic rancidity BAD when

Free fatty acids released in muscle foods and react to proteins to denature them and give a tough texture (happens on freezing muscle)

they are not inactivated in milk; release short chain fatty acids that are very volatile and can also oxidize

GOOD when Used in fermented products Extremely important in ripening of cheeses and dry-

sausages Short chain fatty acids released from milk fat

produces the characteristic odor and flavor of these products (C:8 especially)

Page 34: Enzymes. Enzymes – General properties All enzymes are proteins that function as biological catalysts ◦ They are essential for reactions to occur in living

Enzymes – Important food enzymes

B) Lipases can be used to modify the properties of lipids Very popular application in the margarine industry to modify

lipid crystal structure to give different textures and melting points

Also used to produce mono and diglycerides for use as emulsifiers

A very unique reaction system must be used for these enzymes since they are soluble in water but act on a lipid substrate

The enzyme is located inside the water droplet of a water-in-oil emulsion and acts on the oil surrounding the water droplet

OIL

Page 35: Enzymes. Enzymes – General properties All enzymes are proteins that function as biological catalysts ◦ They are essential for reactions to occur in living

Enzymes – Important food enzymes

ISOMERASESThey all catalyze the isomeric

arrangement within a moleculeGlucose isomerase

◦ The most important isomerase for the food industry

◦ Catalyzes isomeric rearrangement of glucose to fructose (converts an aldose to a ketose) Gives a sweeter product than corn syrup

Sweetness glu = 70; fru = 170; sucrose = 100

Can use less Product called high fructose corn syrup

(HFCS) Made from corn syrup (which is made by

amylase digestion of starch) Enzymes are immobilized in large

columns where the reaction takes place – can reuse them

Adding steps can get you to 55 % frc, 90 % frc

Glu isomerasepH 750-60 °C

CornSyrup

(HFCS)50 % Glucose42 % Fructose

Page 36: Enzymes. Enzymes – General properties All enzymes are proteins that function as biological catalysts ◦ They are essential for reactions to occur in living

Enzymes – Important food enzymes

OXIDOREDUCTASES Enzymes that catalyze the

oxidation or reduction of substrates

A) Lipoxygenase◦ Found in a wide variety of

plants (primarily legumes) and have also been identified in animal tissue (e.g. in the skin of fish)

◦ Specific for the oxidation of fatty acids that have a cis, cis penta-1,4-diene unit (methylene interrupted), so there are three naturally occurring fatty acids that can be substrates Linoleic acid (2 double bonds) Linolenic acid (3 double bonds) Arachidonic acid (4 double

bonds)

Page 37: Enzymes. Enzymes – General properties All enzymes are proteins that function as biological catalysts ◦ They are essential for reactions to occur in living

Enzymes – Important food enzymes

Importance of lipoxygenases in foods◦ Desirable

The enzyme plays a role in bleaching of wheat and soybean flours

It contributes to the formation of S-S bonds in gluten in dough, thus one does not have to add chemical oxidizers to get stronger doughs

◦ Undesirable Lipid oxidation and reactions of its products

Breakdown products of hydroperoxides give off-flavors and odors

Oxidation products (the free radicals or hydroperoxide) can bind and/or oxidize proteins to lead to textural problems

Lipid oxidation also leads to nutritional loss of essential polyunsaturated fatty acids

Vitamins may also be oxidized by the oxidation products Chlorophylls and carotenes (β-carotene) can be bleached

Lipoxygenases can be effectively delayed by using antioxidants

Page 38: Enzymes. Enzymes – General properties All enzymes are proteins that function as biological catalysts ◦ They are essential for reactions to occur in living

Enzymes – Important food enzymes

B) Polyphenol oxidase (PPO)◦ Found in plants (fruits and

vegetables), animals (including humans), insects and microbes

◦ Catalyzes the oxidation of phenolic compounds (mono and/or diphenols) such as catechol, chlorogenic acid, and caffeic acid in the presence of O2 to give quinones which then react to form brown melanin pigments (desirable or undesirable)

◦ Its activity can be inhibited by: Removing O2

pH < 4.5 (lemon juice) Ascorbic acid (vit-C)

(again, lemon juice) Bi-sulfites EDTA

Undesirable browning of apples, bananas, mushrooms, shrimp, lobster, human freckles?Up to 50% economic loss of tropical fruit due to PPO activity

Desirable browning of tea, coffee, cocoa, raisins, prunes, tobacco, human tan, freckles?

Polymerizes Melanins

Page 39: Enzymes. Enzymes – General properties All enzymes are proteins that function as biological catalysts ◦ They are essential for reactions to occur in living