Download - Frontiers of Biotechnology
![Page 1: Frontiers of Biotechnology](https://reader034.vdocuments.us/reader034/viewer/2022050809/56815f5e550346895dce4281/html5/thumbnails/1.jpg)
FRONTIERS OF BIOTECHNOLOGY
![Page 2: Frontiers of Biotechnology](https://reader034.vdocuments.us/reader034/viewer/2022050809/56815f5e550346895dce4281/html5/thumbnails/2.jpg)
MANIPULATING DNA• Scientists use several techniques to
manipulate DNA
![Page 3: Frontiers of Biotechnology](https://reader034.vdocuments.us/reader034/viewer/2022050809/56815f5e550346895dce4281/html5/thumbnails/3.jpg)
RESTRICTION ENZYMES CUT DNA• Why cut DNA?– To study specific genes
instead of ALL the genes on a chromosome
• Restriction enzymes act as molecular scissors– Recognize specific
sequences• Some leave “blunt ends”• Some leave “sticky ends”
![Page 4: Frontiers of Biotechnology](https://reader034.vdocuments.us/reader034/viewer/2022050809/56815f5e550346895dce4281/html5/thumbnails/4.jpg)
RESTRICTION MAPS SHOW THE LENGTHS OF DNA FRAGMENTS
• Gel Electrophoresis: a technique that uses an electrical field within a gel to separate molecules by their size
• DNA is negatively charged and moves toward the positive pole when the electrical field is applied
• Smallest DNA fragments move the fastest
• A pattern of bands is formed
![Page 5: Frontiers of Biotechnology](https://reader034.vdocuments.us/reader034/viewer/2022050809/56815f5e550346895dce4281/html5/thumbnails/5.jpg)
GEL ELECTROPHORESIS
![Page 6: Frontiers of Biotechnology](https://reader034.vdocuments.us/reader034/viewer/2022050809/56815f5e550346895dce4281/html5/thumbnails/6.jpg)
POLYMERASE CHAIN REACTION• PCR: technique
that produces millions of copies of a specific DNA sequence in just a few hours
• Invented by Kary Mullis in 1983
![Page 7: Frontiers of Biotechnology](https://reader034.vdocuments.us/reader034/viewer/2022050809/56815f5e550346895dce4281/html5/thumbnails/7.jpg)
PCR• Uses: – DNA to be copied– DNA polymerase– Plenty of nucleotides A, T, C, and G– Two primers
• 3 Step Process:– Separating– Binding– Copying
![Page 8: Frontiers of Biotechnology](https://reader034.vdocuments.us/reader034/viewer/2022050809/56815f5e550346895dce4281/html5/thumbnails/8.jpg)
RFLPs• Restriction Fragment Length Polymorphisms
• No two individuals have the same genetic material except identical twins
• Restriction enzymes cut at different places, depending on the DNA sequence
• The lengths of DNA restriction fragments are different between two individuals
![Page 9: Frontiers of Biotechnology](https://reader034.vdocuments.us/reader034/viewer/2022050809/56815f5e550346895dce4281/html5/thumbnails/9.jpg)
DNA FINGERPRINTING• A DNA fingerprint is a type of
restriction map
• Representation of parts of a individual’s DNA that can be used to identify a person at the molecular level
• Focuses on noncoding regions of DNA, or DNA sequences outside genes
![Page 10: Frontiers of Biotechnology](https://reader034.vdocuments.us/reader034/viewer/2022050809/56815f5e550346895dce4281/html5/thumbnails/10.jpg)
DNA FINGERPRINTING• DNA sample from:
– Blood– Semen– Bone – Hair
• …Useful in forensics!
![Page 11: Frontiers of Biotechnology](https://reader034.vdocuments.us/reader034/viewer/2022050809/56815f5e550346895dce4281/html5/thumbnails/11.jpg)
DNA FINGERPRINTING IS USED FOR IDENTIFICATION
• DNA fingerprints and probability– Compare at least 5 regions of the
genome
![Page 12: Frontiers of Biotechnology](https://reader034.vdocuments.us/reader034/viewer/2022050809/56815f5e550346895dce4281/html5/thumbnails/12.jpg)
GENETIC ENGINEERING• Entire organisms can be cloned
• Clone: genetically identical copy of a gene or of an organism
• New genes can be added to an organism’s DNA
![Page 13: Frontiers of Biotechnology](https://reader034.vdocuments.us/reader034/viewer/2022050809/56815f5e550346895dce4281/html5/thumbnails/13.jpg)
4 BASIC STEPS TO GENETIC ENGINEERING
• 1. Cutting DNA
• 2. Making recombinant DNA
• 3. Cloning
• 4. Screening
![Page 14: Frontiers of Biotechnology](https://reader034.vdocuments.us/reader034/viewer/2022050809/56815f5e550346895dce4281/html5/thumbnails/14.jpg)
STEP 1: CUTTING DNA
• The DNA from the original organism containing the gene of interest is cut by restriction enzymes
• Restriction Enzymes: bacterial enzymes that destroys foreign DNA molecules by cutting them at specific sites
![Page 15: Frontiers of Biotechnology](https://reader034.vdocuments.us/reader034/viewer/2022050809/56815f5e550346895dce4281/html5/thumbnails/15.jpg)
STEP 1: CUTTING DNA
• Vector: Any agent, such as a plasmid, that carries the gene of interest into another cell
• Plasmid: A circular DNA molecule that is usually found in bacteria and that can replicate independent of the main chromosome
![Page 16: Frontiers of Biotechnology](https://reader034.vdocuments.us/reader034/viewer/2022050809/56815f5e550346895dce4281/html5/thumbnails/16.jpg)
RECOMBINANT DNA
• DNA molecules that are artificially created
• HOW?????
• Created by combining DNA from different sources
![Page 17: Frontiers of Biotechnology](https://reader034.vdocuments.us/reader034/viewer/2022050809/56815f5e550346895dce4281/html5/thumbnails/17.jpg)
EXAMPLE: INSULIN• A protein hormone that controls sugar
metabolism
• Diabetics cannot produce enough
• Must take doses of insulin daily
• Before genetic engineering, insulin was extracted from the pancreases of slaughtered cows and pigs and then purified
• Today the human insulin gene is transferred to bacteria through genetic engineering
• Because the genetic code is universal, bacteria can transcribe and translate the human insulin gene
![Page 18: Frontiers of Biotechnology](https://reader034.vdocuments.us/reader034/viewer/2022050809/56815f5e550346895dce4281/html5/thumbnails/18.jpg)
STEP 2: MAKING RECOMBINANT DNA
• DNA fragments from the gene of interest are combined with the DNA fragments from the vector
• DNA ligase: an enzyme that bonds the DNA fragments together
• The host cell then takes up the recombinant DNA
![Page 19: Frontiers of Biotechnology](https://reader034.vdocuments.us/reader034/viewer/2022050809/56815f5e550346895dce4281/html5/thumbnails/19.jpg)
STEP 3: CLONING
• Gene Cloning: many copies of the gene of interest are made each time the host cell reproduces
• Remember: bacteria reproduce by binary fission, producing identical offspring with the plasmid DNA!
![Page 20: Frontiers of Biotechnology](https://reader034.vdocuments.us/reader034/viewer/2022050809/56815f5e550346895dce4281/html5/thumbnails/20.jpg)
STEP 4: SCREENING• Cells that have received the particular gene
are separated from the cells that did not take up the vector with the gene of interest
• The cells can transcribe and translate the gene of interest to make the protein coded for the gene
![Page 21: Frontiers of Biotechnology](https://reader034.vdocuments.us/reader034/viewer/2022050809/56815f5e550346895dce4281/html5/thumbnails/21.jpg)
CONFIRMATION OF A CLONED GENE
• Southern Blot: a technique used to test for the presence of a specific gene
![Page 22: Frontiers of Biotechnology](https://reader034.vdocuments.us/reader034/viewer/2022050809/56815f5e550346895dce4281/html5/thumbnails/22.jpg)
NORTHERN BLOT• Similar to a
Southern Blot
• Uses RNA instead of DNA
![Page 23: Frontiers of Biotechnology](https://reader034.vdocuments.us/reader034/viewer/2022050809/56815f5e550346895dce4281/html5/thumbnails/23.jpg)
GENETIC ENGINEERING PRODUCES ORGANISMS WITH
NEW TRAITS
![Page 24: Frontiers of Biotechnology](https://reader034.vdocuments.us/reader034/viewer/2022050809/56815f5e550346895dce4281/html5/thumbnails/24.jpg)
SELECTIVE BREEDING• Allowing only those animals with
desired characteristics to produce the next generation
• Horses, cats, farm animals, crops
![Page 25: Frontiers of Biotechnology](https://reader034.vdocuments.us/reader034/viewer/2022050809/56815f5e550346895dce4281/html5/thumbnails/25.jpg)
HYBRIDIZATION
• Crossing dissimilar individuals to bring together the best of both organisms
• Hybrids: the individuals produced from such crosses
• For example, a disease resistant plant and the food producing capacity of another
![Page 26: Frontiers of Biotechnology](https://reader034.vdocuments.us/reader034/viewer/2022050809/56815f5e550346895dce4281/html5/thumbnails/26.jpg)
INBREEDING• The continued breeding of individuals with
similar characteristics
• Often seen in dogs
• Retains characteristics but has risks
• Genetically similar individuals could bring together two recessive alleles for a genetic defect
![Page 27: Frontiers of Biotechnology](https://reader034.vdocuments.us/reader034/viewer/2022050809/56815f5e550346895dce4281/html5/thumbnails/27.jpg)
TODAY…GENETIC ENGINEERING
![Page 28: Frontiers of Biotechnology](https://reader034.vdocuments.us/reader034/viewer/2022050809/56815f5e550346895dce4281/html5/thumbnails/28.jpg)
GENETICALLY ENGINEERED CROPS• More tolerant to
drought
• Plants that can adapt to different soils, climates, and environmental stresses
![Page 29: Frontiers of Biotechnology](https://reader034.vdocuments.us/reader034/viewer/2022050809/56815f5e550346895dce4281/html5/thumbnails/29.jpg)
GENETICALLY ENGINEERED CROPS• Resistant to
biodegradable weedkiller Glyphosate (kills weeds but now doesn’t kill the crop)
• Resistant to insects (gene injures the gut of chewing insects)-therefore plant doesn’t need to be sprayed with pesticides
![Page 30: Frontiers of Biotechnology](https://reader034.vdocuments.us/reader034/viewer/2022050809/56815f5e550346895dce4281/html5/thumbnails/30.jpg)
MORE NUTRITIOUS CROPS• Improve the nutritious value
of many crops
• Asia: rice is a staple food
• Low in iron an beta carotene
• Iron deficient and poor vision
• Genetic engineers have added genes to rice from other plants to overcome this deficiency
![Page 31: Frontiers of Biotechnology](https://reader034.vdocuments.us/reader034/viewer/2022050809/56815f5e550346895dce4281/html5/thumbnails/31.jpg)
POTENTIAL PROBLEMS TO GM CROPS
• Concern that some weeds will become resistant to the weed killer Glyphosate
• New weed-control alternatives will have to be implemented
![Page 32: Frontiers of Biotechnology](https://reader034.vdocuments.us/reader034/viewer/2022050809/56815f5e550346895dce4281/html5/thumbnails/32.jpg)
POTENTIAL PROBLEMS TO GM CROPS
• Nutritional value has been increased in many crops
• Crops must be tested to make sure consumers are not allergic to the GM product
![Page 33: Frontiers of Biotechnology](https://reader034.vdocuments.us/reader034/viewer/2022050809/56815f5e550346895dce4281/html5/thumbnails/33.jpg)
GENE TECHNOLOGY: ANIMAL FARMING
• Farmers added growth hormones to the diet of cows to increase milk production
• Growth hormone was extracted from the brains of dead cows
• The hormone was introduced into bacteria and added as a supplement to a cow’s diet
![Page 34: Frontiers of Biotechnology](https://reader034.vdocuments.us/reader034/viewer/2022050809/56815f5e550346895dce4281/html5/thumbnails/34.jpg)
TRANSGENIC ANIMALS• Animals that have
foreign DNA in their cells
• Human genes have been added to farm animals in order to get the farm animals to produce human proteins in their milk
![Page 35: Frontiers of Biotechnology](https://reader034.vdocuments.us/reader034/viewer/2022050809/56815f5e550346895dce4281/html5/thumbnails/35.jpg)
TRANSGENIC ANIMALS• This is complex and cannot be made by
bacteria through gene technology
• Human proteins are extracted from the animal’s milk and sold for pharmaceutical purposes
• Cloning animals: creating herds of identical animals that can make medically useful proteins
![Page 36: Frontiers of Biotechnology](https://reader034.vdocuments.us/reader034/viewer/2022050809/56815f5e550346895dce4281/html5/thumbnails/36.jpg)
CLONING FROM ADULT ANIMALS• The intact nucleus of an embryonic or fetal
cell (whose DNA has been recombined with a human gene) is placed into an egg whose nucleus has been removed
• The egg with the new nucleus is put in the uterus of a surrogate, or substitute mother and allowed to develop
![Page 37: Frontiers of Biotechnology](https://reader034.vdocuments.us/reader034/viewer/2022050809/56815f5e550346895dce4281/html5/thumbnails/37.jpg)
CLONING FROM ADULT ANIMALS
• 1997 Ian Wilmut first successful cloning using differentiated cells from an adult animal
• Dolly the sheep
![Page 38: Frontiers of Biotechnology](https://reader034.vdocuments.us/reader034/viewer/2022050809/56815f5e550346895dce4281/html5/thumbnails/38.jpg)
CLONING FROM ADULT ANIMALS• Differentiated cells: cells that
have become specialized to become specific cell types
• Scientists had thought that embryonic or fetal cells were the only way…wrong!
![Page 39: Frontiers of Biotechnology](https://reader034.vdocuments.us/reader034/viewer/2022050809/56815f5e550346895dce4281/html5/thumbnails/39.jpg)
CLONING FROM ADULT ANIMALS• Mammary cells from one sheep were fused
with egg cells without nuclei form a different sheep
• The fused cells divided to form embryos, implanted into surrogate mothers
• Only one survived the cloning process
• Dolly, identical to the sheep that provided the mammary cell
![Page 40: Frontiers of Biotechnology](https://reader034.vdocuments.us/reader034/viewer/2022050809/56815f5e550346895dce4281/html5/thumbnails/40.jpg)
![Page 41: Frontiers of Biotechnology](https://reader034.vdocuments.us/reader034/viewer/2022050809/56815f5e550346895dce4281/html5/thumbnails/41.jpg)
PROBLEMS WITH CLONING
• Only a few of the cloned offspring survive for long
• Many become fatally oversized
• Problems in development
![Page 42: Frontiers of Biotechnology](https://reader034.vdocuments.us/reader034/viewer/2022050809/56815f5e550346895dce4281/html5/thumbnails/42.jpg)
GENOMIC IMPRINTING• The right combination of genes are
turned “on” and “off” during early development
• The egg takes years to develop the genomic imprint
• In cloning, the egg divides within minutes
![Page 43: Frontiers of Biotechnology](https://reader034.vdocuments.us/reader034/viewer/2022050809/56815f5e550346895dce4281/html5/thumbnails/43.jpg)
GENOMIC IMPRINTING
• Reprogramming is not possible in such a short time
• Critical errors in development can occur
• Because of these technical problems and ethical problems, cloning humans is illegal in most countries
![Page 44: Frontiers of Biotechnology](https://reader034.vdocuments.us/reader034/viewer/2022050809/56815f5e550346895dce4281/html5/thumbnails/44.jpg)
CONCERNS ABOUT GENETIC ENGINEERING
• Ethical?
• GM crops
– Not enough research had been done to see if added genes might cause allergic reactions or have other unknown side effects
– Interbreeding with natural plants…what does it mean?
![Page 45: Frontiers of Biotechnology](https://reader034.vdocuments.us/reader034/viewer/2022050809/56815f5e550346895dce4281/html5/thumbnails/45.jpg)
GENOMICS INVOLVES THE STUDY OF GENES, GENE FUNCTIONS, AND ENTIRE
GENOMES
• Genomics: The study of genomes, which can include the sequencing of all of an organism’s DNA
• Gene sequencing: determining the order of DNA nucleotides in genes or in genomes
![Page 46: Frontiers of Biotechnology](https://reader034.vdocuments.us/reader034/viewer/2022050809/56815f5e550346895dce4281/html5/thumbnails/46.jpg)
THE GEOGRAPHY OF THE GENOME
• Only 1-1.5% of the human genome codes for proteins
• Each human cell contains about 6 feet of DNA
• Less than 1 inch are exons
•
![Page 47: Frontiers of Biotechnology](https://reader034.vdocuments.us/reader034/viewer/2022050809/56815f5e550346895dce4281/html5/thumbnails/47.jpg)
THE GEOGRAPHY OF THE GENOME
• Human cells contain about 25,000 genes (scientists had expected 120,000!)
• Only 2x the number of genes in a fruit fly!
• Many human genes are identical to those of other species
• All humans are genetically close (DNA of any 2 people is 99.9% identical)
![Page 48: Frontiers of Biotechnology](https://reader034.vdocuments.us/reader034/viewer/2022050809/56815f5e550346895dce4281/html5/thumbnails/48.jpg)
THE HUMAN GENOME PROJECT• Our genome is relatively small! 3 billion base
pairs, but only between 30,000-40,000 genes
• Project started in 1990 with 2 main goals:
– Map and sequence all of the DNA base pairs of the human chromosomes (accomplished in 2003)
– Identify all of the genes within the sequence (still be worked on)
![Page 49: Frontiers of Biotechnology](https://reader034.vdocuments.us/reader034/viewer/2022050809/56815f5e550346895dce4281/html5/thumbnails/49.jpg)
THE HUMAN MICROBIOME PROJECT• 200 scientists at 80 institutions
sequenced the genetic material of bacteria taken from nearly 250 healthy people
• As many as a thousand bacterial strains on each person.
• Each person’s collection of microbes, the “microbiome”, was unique
![Page 50: Frontiers of Biotechnology](https://reader034.vdocuments.us/reader034/viewer/2022050809/56815f5e550346895dce4281/html5/thumbnails/50.jpg)
TECHNOLOGY ALLOWS THE STUDY AND COMPARISON OF BOTH GENES AND
PROTEINS• Bioinformatics: the use of computer databases
to organize and analyze biological data
• DNA microarrays: tools that allow scientists to study many genes, and their expression at once; a small chip dotted with the genes being studied
• Proteomics: the study and comparison of all the proteins that result from an organism’s genome
![Page 51: Frontiers of Biotechnology](https://reader034.vdocuments.us/reader034/viewer/2022050809/56815f5e550346895dce4281/html5/thumbnails/51.jpg)
GENETIC SCREENING AND GENE THERAPY
• Genetic screening: the process of testing DNA to determine a person’s risk of having or passing on a genetic disorder
• Gene therapy: the replacement of a defective of missing gene, or the addition of a new gene, into a person’s genome to treat a gene
![Page 52: Frontiers of Biotechnology](https://reader034.vdocuments.us/reader034/viewer/2022050809/56815f5e550346895dce4281/html5/thumbnails/52.jpg)
GENETICALLY ENGINEERED DRUGS & VACCINES
• Possibilities for the applications of genetic engineering are endless!
![Page 53: Frontiers of Biotechnology](https://reader034.vdocuments.us/reader034/viewer/2022050809/56815f5e550346895dce4281/html5/thumbnails/53.jpg)
DRUGS• Many genetic disorders and other human
illnesses occur when the body fails to make critical proteins
• Example: juvenile diabetes– Body is unable to control levels of sugar in the blood
because the protein insulin cannot be made
• Example: Hemophilia– Factor VIII, a protein that promotes blood clotting– Donated blood was sometimes infected with HIV
and hepatitis B– Genetically engineered factor VIII eliminates these
risks
![Page 54: Frontiers of Biotechnology](https://reader034.vdocuments.us/reader034/viewer/2022050809/56815f5e550346895dce4281/html5/thumbnails/54.jpg)
VACCINESTraditional Vaccines
• Many viral diseases, such as smallpox and polio, cannot be treated effectively by existing drugs
• Vaccine: a solution containing all or part of a harmless version of a pathogen (disease-causing microorganism)
• When the vaccine is injected, the immune system recognizes the pathogen’s surface proteins and responds by making defensive proteins called antibodies
Genetically Engineered Vaccines• Avoid the danger of giving a
patient a disease
• The genes that encode the pathogen’s surface proteins can be inserted into the DNA of harmless viruses, such as cowpox
• The modified, harmless cowpox virus becomes an effective, safe vaccine