![Page 1: EpidemiumDB - Creating the Landscape of Cancer ...wiki.epidemium.cc/images/d/de/EpidemiumDB_7april2016.pdf · EpidemiumDB - Creating the Landscape of Cancer Epidemiology and Big Data](https://reader034.vdocuments.us/reader034/viewer/2022042219/5ec5424ee343b14a424ed241/html5/thumbnails/1.jpg)
Outline Data Management Description Data Analyses Contributing to EpidemiumDB
EpidemiumDB - Creating the Landscape ofCancer Epidemiology and Big Data
Data Management and Standardization in a Large-ScaleCollaborative Project
Seraya Maouche, Edouard Debonneuil, Olivier de Fresnoye,Augustin Terlinden, Peter-Mikhael Richard, Mehdi Benchoufi,
Pierre Mary, on behalf of the Epidemium Project
April 7, 2016
Seraya Maouche, Edouard Debonneuil, Olivier de Fresnoye, Augustin Terlinden, Peter-Mikhael Richard, Mehdi Benchoufi, Pierre Mary, on behalf of the Epidemium Project
EpidemiumDB - Creating the Landscape of Cancer Epidemiology and Big Data
![Page 2: EpidemiumDB - Creating the Landscape of Cancer ...wiki.epidemium.cc/images/d/de/EpidemiumDB_7april2016.pdf · EpidemiumDB - Creating the Landscape of Cancer Epidemiology and Big Data](https://reader034.vdocuments.us/reader034/viewer/2022042219/5ec5424ee343b14a424ed241/html5/thumbnails/2.jpg)
Outline Data Management Description Data Analyses Contributing to EpidemiumDB
About EpidemiumDB
I Born from necessityI Standardise data to facilitate
their integration andreutilization
I Share all data and resourcescollected within Epidemiumprojects
I A collaboration betweenBD4Cancer and Baseline open toall Epidemium Projects
I The BD4Cancer is in charge ofcoordinating the project anddeveloping the database
I Baseline team is creating aninterface for data collection
Seraya Maouche, Edouard Debonneuil, Olivier de Fresnoye, Augustin Terlinden, Peter-Mikhael Richard, Mehdi Benchoufi, Pierre Mary, on behalf of the Epidemium Project
EpidemiumDB - Creating the Landscape of Cancer Epidemiology and Big Data
![Page 3: EpidemiumDB - Creating the Landscape of Cancer ...wiki.epidemium.cc/images/d/de/EpidemiumDB_7april2016.pdf · EpidemiumDB - Creating the Landscape of Cancer Epidemiology and Big Data](https://reader034.vdocuments.us/reader034/viewer/2022042219/5ec5424ee343b14a424ed241/html5/thumbnails/3.jpg)
Outline Data Management Description Data Analyses Contributing to EpidemiumDB
Data Management
Description
Data Analyses
Contributing to EpidemiumDB
Seraya Maouche, Edouard Debonneuil, Olivier de Fresnoye, Augustin Terlinden, Peter-Mikhael Richard, Mehdi Benchoufi, Pierre Mary, on behalf of the Epidemium Project
EpidemiumDB - Creating the Landscape of Cancer Epidemiology and Big Data
![Page 4: EpidemiumDB - Creating the Landscape of Cancer ...wiki.epidemium.cc/images/d/de/EpidemiumDB_7april2016.pdf · EpidemiumDB - Creating the Landscape of Cancer Epidemiology and Big Data](https://reader034.vdocuments.us/reader034/viewer/2022042219/5ec5424ee343b14a424ed241/html5/thumbnails/4.jpg)
Outline Data Management Description Data Analyses Contributing to EpidemiumDB
Creating the Landscape of Cancer Big Data andEpidemiology
Seraya Maouche, Edouard Debonneuil, Olivier de Fresnoye, Augustin Terlinden, Peter-Mikhael Richard, Mehdi Benchoufi, Pierre Mary, on behalf of the Epidemium Project
EpidemiumDB - Creating the Landscape of Cancer Epidemiology and Big Data
![Page 5: EpidemiumDB - Creating the Landscape of Cancer ...wiki.epidemium.cc/images/d/de/EpidemiumDB_7april2016.pdf · EpidemiumDB - Creating the Landscape of Cancer Epidemiology and Big Data](https://reader034.vdocuments.us/reader034/viewer/2022042219/5ec5424ee343b14a424ed241/html5/thumbnails/5.jpg)
Outline Data Management Description Data Analyses Contributing to EpidemiumDB
Data Management Issues in Large-Scale CollaborativeProjects - Example 1
Seraya Maouche, Edouard Debonneuil, Olivier de Fresnoye, Augustin Terlinden, Peter-Mikhael Richard, Mehdi Benchoufi, Pierre Mary, on behalf of the Epidemium Project
EpidemiumDB - Creating the Landscape of Cancer Epidemiology and Big Data
![Page 6: EpidemiumDB - Creating the Landscape of Cancer ...wiki.epidemium.cc/images/d/de/EpidemiumDB_7april2016.pdf · EpidemiumDB - Creating the Landscape of Cancer Epidemiology and Big Data](https://reader034.vdocuments.us/reader034/viewer/2022042219/5ec5424ee343b14a424ed241/html5/thumbnails/6.jpg)
Outline Data Management Description Data Analyses Contributing to EpidemiumDB
Data Management Issues in Large-Scale CollaborativeProjects - Example 2
Seraya Maouche, Edouard Debonneuil, Olivier de Fresnoye, Augustin Terlinden, Peter-Mikhael Richard, Mehdi Benchoufi, Pierre Mary, on behalf of the Epidemium Project
EpidemiumDB - Creating the Landscape of Cancer Epidemiology and Big Data
![Page 7: EpidemiumDB - Creating the Landscape of Cancer ...wiki.epidemium.cc/images/d/de/EpidemiumDB_7april2016.pdf · EpidemiumDB - Creating the Landscape of Cancer Epidemiology and Big Data](https://reader034.vdocuments.us/reader034/viewer/2022042219/5ec5424ee343b14a424ed241/html5/thumbnails/7.jpg)
Outline Data Management Description Data Analyses Contributing to EpidemiumDB
Sharing collected datasets (1)
Seraya Maouche, Edouard Debonneuil, Olivier de Fresnoye, Augustin Terlinden, Peter-Mikhael Richard, Mehdi Benchoufi, Pierre Mary, on behalf of the Epidemium Project
EpidemiumDB - Creating the Landscape of Cancer Epidemiology and Big Data
![Page 8: EpidemiumDB - Creating the Landscape of Cancer ...wiki.epidemium.cc/images/d/de/EpidemiumDB_7april2016.pdf · EpidemiumDB - Creating the Landscape of Cancer Epidemiology and Big Data](https://reader034.vdocuments.us/reader034/viewer/2022042219/5ec5424ee343b14a424ed241/html5/thumbnails/8.jpg)
Outline Data Management Description Data Analyses Contributing to EpidemiumDB
Sharing collected datasets (2)
Seraya Maouche, Edouard Debonneuil, Olivier de Fresnoye, Augustin Terlinden, Peter-Mikhael Richard, Mehdi Benchoufi, Pierre Mary, on behalf of the Epidemium Project
EpidemiumDB - Creating the Landscape of Cancer Epidemiology and Big Data
![Page 9: EpidemiumDB - Creating the Landscape of Cancer ...wiki.epidemium.cc/images/d/de/EpidemiumDB_7april2016.pdf · EpidemiumDB - Creating the Landscape of Cancer Epidemiology and Big Data](https://reader034.vdocuments.us/reader034/viewer/2022042219/5ec5424ee343b14a424ed241/html5/thumbnails/9.jpg)
Outline Data Management Description Data Analyses Contributing to EpidemiumDB
Why EpidemiumDB ?
I Share all data and resources collected within Epidemiumprojects
I Create a global and interactive map of all resources (results,datasets, studies, clinical trials, anti-cancer drugs, drugsdatabases, publications,..) available for cancer epidemiologyand Big Data
I Standardise data to facilitate their integration and reutilization
Seraya Maouche, Edouard Debonneuil, Olivier de Fresnoye, Augustin Terlinden, Peter-Mikhael Richard, Mehdi Benchoufi, Pierre Mary, on behalf of the Epidemium Project
EpidemiumDB - Creating the Landscape of Cancer Epidemiology and Big Data
![Page 10: EpidemiumDB - Creating the Landscape of Cancer ...wiki.epidemium.cc/images/d/de/EpidemiumDB_7april2016.pdf · EpidemiumDB - Creating the Landscape of Cancer Epidemiology and Big Data](https://reader034.vdocuments.us/reader034/viewer/2022042219/5ec5424ee343b14a424ed241/html5/thumbnails/10.jpg)
Outline Data Management Description Data Analyses Contributing to EpidemiumDB
Why EpidemiumDB ?
I Share all data and resources collected within Epidemiumprojects
I Create a global and interactive map of all resources (results,datasets, studies, clinical trials, anti-cancer drugs, drugsdatabases, publications,..) available for cancer epidemiologyand Big Data
I Standardise data to facilitate their integration and reutilization
Seraya Maouche, Edouard Debonneuil, Olivier de Fresnoye, Augustin Terlinden, Peter-Mikhael Richard, Mehdi Benchoufi, Pierre Mary, on behalf of the Epidemium Project
EpidemiumDB - Creating the Landscape of Cancer Epidemiology and Big Data
![Page 11: EpidemiumDB - Creating the Landscape of Cancer ...wiki.epidemium.cc/images/d/de/EpidemiumDB_7april2016.pdf · EpidemiumDB - Creating the Landscape of Cancer Epidemiology and Big Data](https://reader034.vdocuments.us/reader034/viewer/2022042219/5ec5424ee343b14a424ed241/html5/thumbnails/11.jpg)
Outline Data Management Description Data Analyses Contributing to EpidemiumDB
Why EpidemiumDB ?
I Share all data and resources collected within Epidemiumprojects
I Create a global and interactive map of all resources (results,datasets, studies, clinical trials, anti-cancer drugs, drugsdatabases, publications,..) available for cancer epidemiologyand Big Data
I Standardise data to facilitate their integration and reutilization
Seraya Maouche, Edouard Debonneuil, Olivier de Fresnoye, Augustin Terlinden, Peter-Mikhael Richard, Mehdi Benchoufi, Pierre Mary, on behalf of the Epidemium Project
EpidemiumDB - Creating the Landscape of Cancer Epidemiology and Big Data
![Page 12: EpidemiumDB - Creating the Landscape of Cancer ...wiki.epidemium.cc/images/d/de/EpidemiumDB_7april2016.pdf · EpidemiumDB - Creating the Landscape of Cancer Epidemiology and Big Data](https://reader034.vdocuments.us/reader034/viewer/2022042219/5ec5424ee343b14a424ed241/html5/thumbnails/12.jpg)
Outline Data Management Description Data Analyses Contributing to EpidemiumDB
Annotation and Metadata are important to report
Seraya Maouche, Edouard Debonneuil, Olivier de Fresnoye, Augustin Terlinden, Peter-Mikhael Richard, Mehdi Benchoufi, Pierre Mary, on behalf of the Epidemium Project
EpidemiumDB - Creating the Landscape of Cancer Epidemiology and Big Data
![Page 13: EpidemiumDB - Creating the Landscape of Cancer ...wiki.epidemium.cc/images/d/de/EpidemiumDB_7april2016.pdf · EpidemiumDB - Creating the Landscape of Cancer Epidemiology and Big Data](https://reader034.vdocuments.us/reader034/viewer/2022042219/5ec5424ee343b14a424ed241/html5/thumbnails/13.jpg)
Outline Data Management Description Data Analyses Contributing to EpidemiumDB
EpidemiumDB content
I All cancer types, their classifications and codification (ICD-10,ICD-O-3, SNOMED, MeSH, externat links to OMIM,MedlinePlus,..)
I Anti-cancer drugs, their known or predicted (withinBD4Cancer) SEs, ADRs
I gene-cancer associations
I All known risk factors for cancers
I Cancer epidemiological data (provided by Epidemium orcollected within Baseline)
I Publications, reports, news about Big Data in oncology,
I Twitter data on cancer pharmacology
I ...
Seraya Maouche, Edouard Debonneuil, Olivier de Fresnoye, Augustin Terlinden, Peter-Mikhael Richard, Mehdi Benchoufi, Pierre Mary, on behalf of the Epidemium Project
EpidemiumDB - Creating the Landscape of Cancer Epidemiology and Big Data
![Page 14: EpidemiumDB - Creating the Landscape of Cancer ...wiki.epidemium.cc/images/d/de/EpidemiumDB_7april2016.pdf · EpidemiumDB - Creating the Landscape of Cancer Epidemiology and Big Data](https://reader034.vdocuments.us/reader034/viewer/2022042219/5ec5424ee343b14a424ed241/html5/thumbnails/14.jpg)
Outline Data Management Description Data Analyses Contributing to EpidemiumDB
EpidemiumDB content
I All cancer types, their classifications and codification (ICD-10,ICD-O-3, SNOMED, MeSH, externat links to OMIM,MedlinePlus,..)
I Anti-cancer drugs, their known or predicted (withinBD4Cancer) SEs, ADRs
I gene-cancer associations
I All known risk factors for cancers
I Cancer epidemiological data (provided by Epidemium orcollected within Baseline)
I Publications, reports, news about Big Data in oncology,
I Twitter data on cancer pharmacology
I ...
Seraya Maouche, Edouard Debonneuil, Olivier de Fresnoye, Augustin Terlinden, Peter-Mikhael Richard, Mehdi Benchoufi, Pierre Mary, on behalf of the Epidemium Project
EpidemiumDB - Creating the Landscape of Cancer Epidemiology and Big Data
![Page 15: EpidemiumDB - Creating the Landscape of Cancer ...wiki.epidemium.cc/images/d/de/EpidemiumDB_7april2016.pdf · EpidemiumDB - Creating the Landscape of Cancer Epidemiology and Big Data](https://reader034.vdocuments.us/reader034/viewer/2022042219/5ec5424ee343b14a424ed241/html5/thumbnails/15.jpg)
Outline Data Management Description Data Analyses Contributing to EpidemiumDB
EpidemiumDB content
I All cancer types, their classifications and codification (ICD-10,ICD-O-3, SNOMED, MeSH, externat links to OMIM,MedlinePlus,..)
I Anti-cancer drugs, their known or predicted (withinBD4Cancer) SEs, ADRs
I gene-cancer associations
I All known risk factors for cancers
I Cancer epidemiological data (provided by Epidemium orcollected within Baseline)
I Publications, reports, news about Big Data in oncology,
I Twitter data on cancer pharmacology
I ...
Seraya Maouche, Edouard Debonneuil, Olivier de Fresnoye, Augustin Terlinden, Peter-Mikhael Richard, Mehdi Benchoufi, Pierre Mary, on behalf of the Epidemium Project
EpidemiumDB - Creating the Landscape of Cancer Epidemiology and Big Data
![Page 16: EpidemiumDB - Creating the Landscape of Cancer ...wiki.epidemium.cc/images/d/de/EpidemiumDB_7april2016.pdf · EpidemiumDB - Creating the Landscape of Cancer Epidemiology and Big Data](https://reader034.vdocuments.us/reader034/viewer/2022042219/5ec5424ee343b14a424ed241/html5/thumbnails/16.jpg)
Outline Data Management Description Data Analyses Contributing to EpidemiumDB
EpidemiumDB content
I All cancer types, their classifications and codification (ICD-10,ICD-O-3, SNOMED, MeSH, externat links to OMIM,MedlinePlus,..)
I Anti-cancer drugs, their known or predicted (withinBD4Cancer) SEs, ADRs
I gene-cancer associations
I All known risk factors for cancers
I Cancer epidemiological data (provided by Epidemium orcollected within Baseline)
I Publications, reports, news about Big Data in oncology,
I Twitter data on cancer pharmacology
I ...
Seraya Maouche, Edouard Debonneuil, Olivier de Fresnoye, Augustin Terlinden, Peter-Mikhael Richard, Mehdi Benchoufi, Pierre Mary, on behalf of the Epidemium Project
EpidemiumDB - Creating the Landscape of Cancer Epidemiology and Big Data
![Page 17: EpidemiumDB - Creating the Landscape of Cancer ...wiki.epidemium.cc/images/d/de/EpidemiumDB_7april2016.pdf · EpidemiumDB - Creating the Landscape of Cancer Epidemiology and Big Data](https://reader034.vdocuments.us/reader034/viewer/2022042219/5ec5424ee343b14a424ed241/html5/thumbnails/17.jpg)
Outline Data Management Description Data Analyses Contributing to EpidemiumDB
EpidemiumDB content
I All cancer types, their classifications and codification (ICD-10,ICD-O-3, SNOMED, MeSH, externat links to OMIM,MedlinePlus,..)
I Anti-cancer drugs, their known or predicted (withinBD4Cancer) SEs, ADRs
I gene-cancer associations
I All known risk factors for cancers
I Cancer epidemiological data (provided by Epidemium orcollected within Baseline)
I Publications, reports, news about Big Data in oncology,
I Twitter data on cancer pharmacology
I ...
Seraya Maouche, Edouard Debonneuil, Olivier de Fresnoye, Augustin Terlinden, Peter-Mikhael Richard, Mehdi Benchoufi, Pierre Mary, on behalf of the Epidemium Project
EpidemiumDB - Creating the Landscape of Cancer Epidemiology and Big Data
![Page 18: EpidemiumDB - Creating the Landscape of Cancer ...wiki.epidemium.cc/images/d/de/EpidemiumDB_7april2016.pdf · EpidemiumDB - Creating the Landscape of Cancer Epidemiology and Big Data](https://reader034.vdocuments.us/reader034/viewer/2022042219/5ec5424ee343b14a424ed241/html5/thumbnails/18.jpg)
Outline Data Management Description Data Analyses Contributing to EpidemiumDB
EpidemiumDB content
I All cancer types, their classifications and codification (ICD-10,ICD-O-3, SNOMED, MeSH, externat links to OMIM,MedlinePlus,..)
I Anti-cancer drugs, their known or predicted (withinBD4Cancer) SEs, ADRs
I gene-cancer associations
I All known risk factors for cancers
I Cancer epidemiological data (provided by Epidemium orcollected within Baseline)
I Publications, reports, news about Big Data in oncology,
I Twitter data on cancer pharmacology
I ...
Seraya Maouche, Edouard Debonneuil, Olivier de Fresnoye, Augustin Terlinden, Peter-Mikhael Richard, Mehdi Benchoufi, Pierre Mary, on behalf of the Epidemium Project
EpidemiumDB - Creating the Landscape of Cancer Epidemiology and Big Data
![Page 19: EpidemiumDB - Creating the Landscape of Cancer ...wiki.epidemium.cc/images/d/de/EpidemiumDB_7april2016.pdf · EpidemiumDB - Creating the Landscape of Cancer Epidemiology and Big Data](https://reader034.vdocuments.us/reader034/viewer/2022042219/5ec5424ee343b14a424ed241/html5/thumbnails/19.jpg)
Outline Data Management Description Data Analyses Contributing to EpidemiumDB
EpidemiumDB content
I All cancer types, their classifications and codification (ICD-10,ICD-O-3, SNOMED, MeSH, externat links to OMIM,MedlinePlus,..)
I Anti-cancer drugs, their known or predicted (withinBD4Cancer) SEs, ADRs
I gene-cancer associations
I All known risk factors for cancers
I Cancer epidemiological data (provided by Epidemium orcollected within Baseline)
I Publications, reports, news about Big Data in oncology,
I Twitter data on cancer pharmacology
I ...
Seraya Maouche, Edouard Debonneuil, Olivier de Fresnoye, Augustin Terlinden, Peter-Mikhael Richard, Mehdi Benchoufi, Pierre Mary, on behalf of the Epidemium Project
EpidemiumDB - Creating the Landscape of Cancer Epidemiology and Big Data
![Page 20: EpidemiumDB - Creating the Landscape of Cancer ...wiki.epidemium.cc/images/d/de/EpidemiumDB_7april2016.pdf · EpidemiumDB - Creating the Landscape of Cancer Epidemiology and Big Data](https://reader034.vdocuments.us/reader034/viewer/2022042219/5ec5424ee343b14a424ed241/html5/thumbnails/20.jpg)
Outline Data Management Description Data Analyses Contributing to EpidemiumDB
EpidemiumDB content
I All cancer types, their classifications and codification (ICD-10,ICD-O-3, SNOMED, MeSH, externat links to OMIM,MedlinePlus,..)
I Anti-cancer drugs, their known or predicted (withinBD4Cancer) SEs, ADRs
I gene-cancer associations
I All known risk factors for cancers
I Cancer epidemiological data (provided by Epidemium orcollected within Baseline)
I Publications, reports, news about Big Data in oncology,
I Twitter data on cancer pharmacology
I ...
Seraya Maouche, Edouard Debonneuil, Olivier de Fresnoye, Augustin Terlinden, Peter-Mikhael Richard, Mehdi Benchoufi, Pierre Mary, on behalf of the Epidemium Project
EpidemiumDB - Creating the Landscape of Cancer Epidemiology and Big Data
![Page 21: EpidemiumDB - Creating the Landscape of Cancer ...wiki.epidemium.cc/images/d/de/EpidemiumDB_7april2016.pdf · EpidemiumDB - Creating the Landscape of Cancer Epidemiology and Big Data](https://reader034.vdocuments.us/reader034/viewer/2022042219/5ec5424ee343b14a424ed241/html5/thumbnails/21.jpg)
Outline Data Management Description Data Analyses Contributing to EpidemiumDB
Data modeling - an ongoing process
Seraya Maouche, Edouard Debonneuil, Olivier de Fresnoye, Augustin Terlinden, Peter-Mikhael Richard, Mehdi Benchoufi, Pierre Mary, on behalf of the Epidemium Project
EpidemiumDB - Creating the Landscape of Cancer Epidemiology and Big Data
![Page 22: EpidemiumDB - Creating the Landscape of Cancer ...wiki.epidemium.cc/images/d/de/EpidemiumDB_7april2016.pdf · EpidemiumDB - Creating the Landscape of Cancer Epidemiology and Big Data](https://reader034.vdocuments.us/reader034/viewer/2022042219/5ec5424ee343b14a424ed241/html5/thumbnails/22.jpg)
Outline Data Management Description Data Analyses Contributing to EpidemiumDB
EpidemiumDB/R Interface
Seraya Maouche, Edouard Debonneuil, Olivier de Fresnoye, Augustin Terlinden, Peter-Mikhael Richard, Mehdi Benchoufi, Pierre Mary, on behalf of the Epidemium Project
EpidemiumDB - Creating the Landscape of Cancer Epidemiology and Big Data
![Page 23: EpidemiumDB - Creating the Landscape of Cancer ...wiki.epidemium.cc/images/d/de/EpidemiumDB_7april2016.pdf · EpidemiumDB - Creating the Landscape of Cancer Epidemiology and Big Data](https://reader034.vdocuments.us/reader034/viewer/2022042219/5ec5424ee343b14a424ed241/html5/thumbnails/23.jpg)
Outline Data Management Description Data Analyses Contributing to EpidemiumDB
Sending us your requirements
I Prepare the database to receive the output of your projects(request specfic tables,..)
I Use standaridized data
I Approve and comment data modeling shared with Epidemiummembers
I Share your datasets
Seraya Maouche, Edouard Debonneuil, Olivier de Fresnoye, Augustin Terlinden, Peter-Mikhael Richard, Mehdi Benchoufi, Pierre Mary, on behalf of the Epidemium Project
EpidemiumDB - Creating the Landscape of Cancer Epidemiology and Big Data
![Page 24: EpidemiumDB - Creating the Landscape of Cancer ...wiki.epidemium.cc/images/d/de/EpidemiumDB_7april2016.pdf · EpidemiumDB - Creating the Landscape of Cancer Epidemiology and Big Data](https://reader034.vdocuments.us/reader034/viewer/2022042219/5ec5424ee343b14a424ed241/html5/thumbnails/24.jpg)
Outline Data Management Description Data Analyses Contributing to EpidemiumDB
Sending us your requirements
I Prepare the database to receive the output of your projects(request specfic tables,..)
I Use standaridized data
I Approve and comment data modeling shared with Epidemiummembers
I Share your datasets
Seraya Maouche, Edouard Debonneuil, Olivier de Fresnoye, Augustin Terlinden, Peter-Mikhael Richard, Mehdi Benchoufi, Pierre Mary, on behalf of the Epidemium Project
EpidemiumDB - Creating the Landscape of Cancer Epidemiology and Big Data
![Page 25: EpidemiumDB - Creating the Landscape of Cancer ...wiki.epidemium.cc/images/d/de/EpidemiumDB_7april2016.pdf · EpidemiumDB - Creating the Landscape of Cancer Epidemiology and Big Data](https://reader034.vdocuments.us/reader034/viewer/2022042219/5ec5424ee343b14a424ed241/html5/thumbnails/25.jpg)
Outline Data Management Description Data Analyses Contributing to EpidemiumDB
Sending us your requirements
I Prepare the database to receive the output of your projects(request specfic tables,..)
I Use standaridized data
I Approve and comment data modeling shared with Epidemiummembers
I Share your datasets
Seraya Maouche, Edouard Debonneuil, Olivier de Fresnoye, Augustin Terlinden, Peter-Mikhael Richard, Mehdi Benchoufi, Pierre Mary, on behalf of the Epidemium Project
EpidemiumDB - Creating the Landscape of Cancer Epidemiology and Big Data
![Page 26: EpidemiumDB - Creating the Landscape of Cancer ...wiki.epidemium.cc/images/d/de/EpidemiumDB_7april2016.pdf · EpidemiumDB - Creating the Landscape of Cancer Epidemiology and Big Data](https://reader034.vdocuments.us/reader034/viewer/2022042219/5ec5424ee343b14a424ed241/html5/thumbnails/26.jpg)
Outline Data Management Description Data Analyses Contributing to EpidemiumDB
Sending us your requirements
I Prepare the database to receive the output of your projects(request specfic tables,..)
I Use standaridized data
I Approve and comment data modeling shared with Epidemiummembers
I Share your datasets
Seraya Maouche, Edouard Debonneuil, Olivier de Fresnoye, Augustin Terlinden, Peter-Mikhael Richard, Mehdi Benchoufi, Pierre Mary, on behalf of the Epidemium Project
EpidemiumDB - Creating the Landscape of Cancer Epidemiology and Big Data
![Page 27: EpidemiumDB - Creating the Landscape of Cancer ...wiki.epidemium.cc/images/d/de/EpidemiumDB_7april2016.pdf · EpidemiumDB - Creating the Landscape of Cancer Epidemiology and Big Data](https://reader034.vdocuments.us/reader034/viewer/2022042219/5ec5424ee343b14a424ed241/html5/thumbnails/27.jpg)
Outline Data Management Description Data Analyses Contributing to EpidemiumDB
Contributing to EpidemiumDB
I The EpidemiumDB Wiki Pagehttp://wiki.epidemium.cc/wiki/EpidemiumDB. Thispage is used to discuss the design of the database
I EpidemiumDB Github repositoryhttps://github.com/Epidemium/EpidemiumDB
I To submit data to Baseline:http://baseline.epidemium.cc
Seraya Maouche, Edouard Debonneuil, Olivier de Fresnoye, Augustin Terlinden, Peter-Mikhael Richard, Mehdi Benchoufi, Pierre Mary, on behalf of the Epidemium Project
EpidemiumDB - Creating the Landscape of Cancer Epidemiology and Big Data
![Page 28: EpidemiumDB - Creating the Landscape of Cancer ...wiki.epidemium.cc/images/d/de/EpidemiumDB_7april2016.pdf · EpidemiumDB - Creating the Landscape of Cancer Epidemiology and Big Data](https://reader034.vdocuments.us/reader034/viewer/2022042219/5ec5424ee343b14a424ed241/html5/thumbnails/28.jpg)
Outline Data Management Description Data Analyses Contributing to EpidemiumDB
Contributing to EpidemiumDB
I The EpidemiumDB Wiki Pagehttp://wiki.epidemium.cc/wiki/EpidemiumDB. Thispage is used to discuss the design of the database
I EpidemiumDB Github repositoryhttps://github.com/Epidemium/EpidemiumDB
I To submit data to Baseline:http://baseline.epidemium.cc
Seraya Maouche, Edouard Debonneuil, Olivier de Fresnoye, Augustin Terlinden, Peter-Mikhael Richard, Mehdi Benchoufi, Pierre Mary, on behalf of the Epidemium Project
EpidemiumDB - Creating the Landscape of Cancer Epidemiology and Big Data
![Page 29: EpidemiumDB - Creating the Landscape of Cancer ...wiki.epidemium.cc/images/d/de/EpidemiumDB_7april2016.pdf · EpidemiumDB - Creating the Landscape of Cancer Epidemiology and Big Data](https://reader034.vdocuments.us/reader034/viewer/2022042219/5ec5424ee343b14a424ed241/html5/thumbnails/29.jpg)
Outline Data Management Description Data Analyses Contributing to EpidemiumDB
Contributing to EpidemiumDB
I The EpidemiumDB Wiki Pagehttp://wiki.epidemium.cc/wiki/EpidemiumDB. Thispage is used to discuss the design of the database
I EpidemiumDB Github repositoryhttps://github.com/Epidemium/EpidemiumDB
I To submit data to Baseline:http://baseline.epidemium.cc
Seraya Maouche, Edouard Debonneuil, Olivier de Fresnoye, Augustin Terlinden, Peter-Mikhael Richard, Mehdi Benchoufi, Pierre Mary, on behalf of the Epidemium Project
EpidemiumDB - Creating the Landscape of Cancer Epidemiology and Big Data