dna library lists – june 2008 - midi, incmidi-inc.com/pdf/sherlock_dna_libraries_2.1.pdf · dna...

60
DNA Library Lists – June 2008 * New in version 2.10 MIDI Inc. © 2008 Page 1 of 60 June 2008 The following Sherlock DNA libraries are described in this document: 1. D16S2, 500 bp, 16S rRNA gene bacterial library, version 2.10 2. MD16S2, 16S rRNA full gene bacterial library, version 2.10 3. FY28S2, 28S rRNA full gene fungi/yeast library version 2.10

Upload: others

Post on 28-Mar-2020

1 views

Category:

Documents


0 download

TRANSCRIPT

Page 1: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

DNA Library Lists – June 2008

* New in version 2.10

MIDI Inc. © 2008 Page 1 of 60 June 2008

The following Sherlock DNA libraries are described in this document:

1. D16S2, 500 bp, 16S rRNA gene bacterial library, version 2.10

2. MD16S2, 16S rRNA full gene bacterial library, version 2.10

3. FY28S2, 28S rRNA full gene fungi/yeast library version 2.10

Page 2: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

D16S2 version 2.10

* New in version 2.10

MIDI Inc. © 2008 Page 2 of 60 June 2008

AbiotrophiaA. defectiva

AcetobacterA. aceti

AchromobacterA. piechaudiiA. xylosoxidans

AcidovoraxA. avenaeA. defluviiA. delafieldiiA. facilisA. konjaciA. temperans

* A. valerianellae

AcinetobacterA. baumannii

* A. baylyiA. calcoaceticusA. genomospecies 10A. genomospecies 11A. genomospecies 13A. genomospecies 14A. genomospecies 16A. genomospecies 3A. genomospecies 6A. genomospecies 9A. grimontiiA. haemolyticusA. johnsoniiA. juniiA. lwoffii

* A. parvusA. radioresistens

* A. schindleri* A. towneri* A. ursingii

ActinobacillusA. capsulatusA. equuliA. hominisA. lignieresiiA. pleuropneumoniaeA. rossiiA. seminisA. suisA. ureae

Actinocorallia* A. aurantiaca* A. glomerata

A. libanotica

ActinokineosporaA. riparia

ActinomaduraA. kijaniataA. maduraeA. oligosporaA. pelletieriA. viridis

ActinomycesA. bovisA. howelliiA. israeliiA. meyeriA. naeslundiiA. neuiiA. radingaeA. slackiiA. viscosus

ActinoplanesA. auranticolorA. brasiliensisA. consettensisA. deccanensisA. derwentensisA. durhamensisA. ferrugineusA. globisporusA. humidusA. ianthinogenesA. italicusA. missouriensisA. palleroniiA. philippinensisA. rectilineatus

* A. regularisA. teichomyceticusA. utahensisA. violaceusA. yunnanensis

ActinosynnemaA. pretiosum

Page 3: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

D16S2 version 2.10

* New in version 2.10

MIDI Inc. © 2008 Page 3 of 60 June 2008

AerococcusA. urinaeA. viridans

Aeromicrobium* A. erythreum

AeromonasA. allosaccharophilaA. bestiarumA. caviaeA. encheleiaA. enteropelogenesA. eucrenophilaA. hydrophilaA. jandaeiA. media

* A. molluscorumA. popoffiiA. salmonicidaA. schubertii

* A. simiaeA. sobriaA. trotaA. veronii

AfipiaA. broomeae

* A. clevelandensisA. felis

Aggregatibacter (was Haemophilus)A. actinomycetemcomitansA. aphrophilusA. segnis

Agrococcus* A. citreus

Agromyces* A. cerinus* A. humatus

A. mediolanus* A. rhizospherae

AlcaligenesA. faecalis

Algoriphagus* A. halophilus

Alicyclobacillus* A. vulcanalis

AlkalibacillusA. haloalkaliphilus (was Bacillus)

AlloiococcusA. otitis

AlteromonasA. macleodii

Aminobacter* A. aganoensis* A. aminovorans

A. heintzii (was Chelatobacter)

AmycolatopsisA. mediterraneiA. orientalis

AnaerococcusA. hydrogenalisA. prevotiiA. tetradiusA. vaginalis

AncalomicrobiumA. adetum

AneurinibacillusA. aneurinilyticusA. migulanus

* A. thermoaerophilus

AquaspirillumA. peregrinumA. polymorphum

ArcanobacteriumA. bernardiaeA. haemolyticumA. pyogenes

ArcobacterA. butzleri

Page 4: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

D16S2 version 2.10

* New in version 2.10

MIDI Inc. © 2008 Page 4 of 60 June 2008

ArthrobacterA. agilisA. atrocyaneusA. aurescensA. citreusA. crystallopoietesA. cumminsiiA. globiformisA. histidinolovoransA. ilicisA. mysorensA. nicotianaeA. oxydansA. pascensA. protophormiaeA. ramosus

* A. russicus* A. stackebrandtii

A. uratoxydansA. ureafaciensA. woluwensis

AsticcacaulisA. biprostheciumA. excentricus

AtopobiumA. fossorA. minutumA. rimae

AvibacteriumA. avium (was Pasteurella)A. gallinarum (was Pasteurella)A. paragallinarum (was Haemophilus)A. volantium (was Pasteurella)

AzohydromonasA. lata (was Alcaligenes)

Azotobacter* A. vinelandii

BacillusB. agaradhaerensB. alcalophilusB. amyloliquefaciensB. arenosi

* B. arviB. atrophaeusB. azotoformansB. badius

Bacillus (continued)* B. barbaricus

B. cereus* B. cibi

B. circulansB. clarkiiB. clausiiB. coagulansB. cohnii

* B. decolorationis* B. endophyticus

B. fastidiosusB. firmusB. flexus

* B. fordii* B. funiculus

B. fusiformis* B. galactosidilyticus

B. gibsoniiB. halmapalusB. haloduransB. horikoshii

* B. horti* B. humi

B. insolitusB. lentusB. licheniformisB. megateriumB. mojavensis

* B. muralisB. mycoides

* B. nealsonii* B. neidei

B. niaciniB. okuhidensisB. oleronius

* B. patagoniensisB. pseudalcaliphilusB. pseudofirmus

* B. pseudomycoides* B. psychrodurans

B. psychrosaccharolyticus* B. psychrotolerans

B. pumilus* B. pycnus

B. schlegelii* B. silvestris

B. simplex* B. siralis

B. smithii* B. sonorensis

B. sphaericus

Page 5: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

D16S2 version 2.10

* New in version 2.10

MIDI Inc. © 2008 Page 5 of 60 June 2008

Bacillus (continued)B. sporothermodurans

* B. subterraneusB. subtilisB. thuringiensisB. vedderi

* B. weihenstephanenesis

BacteroidesB. caccaeB. eggerthiiB. fragilisB. ovatusB. stercorisB. thetaiotaomicronB. uniformisB. ureolyticusB. vulgatus

BartonellaB. elizabethaeB. henselaeB. vinsonii

BibersteiniaB. trehalosi (was Pasteurella)

BifidobacteriumB. animalisB. asteroidesB. bifidumB. boumB. breveB. catenulatumB. choerinumB. infantisB. longum

Blastomonas* B. natatoria

BordetellaB. aviumB. bronchisepticaB. hinziiB. holmesiiB. parapertussisB. pertussisB. trematum

Bosea* B. minatitlanensis

Brachybacterium* B. muris

BradyrhizobiumB. sp.

BrenneriaB. quercinaB. rubrifaciensB. salicis

BrevibacillusB. agriB. borstelensisB. brevisB. centrosporusB. choshinensisB. formosus

* B. invocatusB. laterosporus

* B. limnophilusB. parabrevisB. reuszeri

BrevibacteriumB. caseiB. epidermidisB. frigoritoleransB. halotoleransB. iodinumB. linens

* B. luteolum* B. lyticum

B. mcbrellneri* B. paucivorans* B. sanguinis

B. stationis

BrevundimonasB. diminutaB. intermedia

* B. nasdaeB. variabilisB. vesicularis

BrochothrixB. campestrisB. thermosphacta

Page 6: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

D16S2 version 2.10

* New in version 2.10

MIDI Inc. © 2008 Page 6 of 60 June 2008

BudviciaB. aquatica

Burkholderia* B. ambifaria

B. andropogonis* B. anthina* B. caledonica

B. caryophylliB. cenocepaciaB. cepacia

* B. dolosa* B. fungorum

B. gladioliB. glatheiB. glumae

* B. graminis* B. kururiensis* B. multivorans

B. phenazinium* B. phymatum* B. phytofirmans

B. plantarii* B. pyrrocinia* B. sacchari* B. stabilis* B. thailandensis* B. tropica* B. ubonensis* B. unamae* B. vietnamiensis* B. xenovorans

ButtiauxellaB. agrestisB. noackiae

CampylobacterC. coliC. curvusC. fetusC. gracilisC. helveticusC. hyointestinalisC. jejuniC. mucosalisC. rectusC. upsaliensis

CapnocytophagaC. canimorsusC. cynodegmiC. haemolyticaC. ochracea

CarbophilusC. carboxidus

CardiobacteriumC. hominis

CarnobacteriumC. divergensC. gallinarumC. maltaromicus (was Lactobacillus)C. mobileC. piscicola

Castellaniella* C. defragrans

CaulobacterC. fusiformisC. henriciiC. leidyi

CedeceaC. davisaeC. lapageiC. neteri

CellulomonasC. biazotea

* C. cartaeC. cellaseaC. fimiC. flavigenaC. gelidaC. hominisC. humilataC. uda

Cellulophaga* C. lytica

CellulosimicrobiumC. cellulans

ChelatococcusC. asaccharovorans

ChitinophagaC. arvensicola (was Cytophaga)C. sancti (was Flexibacter)

ChromobacteriumC. violaceum

Page 7: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

D16S2 version 2.10

* New in version 2.10

MIDI Inc. © 2008 Page 7 of 60 June 2008

Chromohalobacter* C. beijerinckii

ChryseobacteriumC. balustinum

* C. defluviiC. gleumC. indologenesC. indoltheticum

ChryseomonasC. luteola

CitrobacterC. amalonaticusC. braakiiC. farmeriC. freundiiC. koseri

* C. murliniaeC. rodentiumC. sedlakiiC. werkmaniiC. youngae

ClavibacterC. michiganensis

ClostridiumC. absonumC. argentinenseC. baratiiC. beijerinckiiC. bifermentansC. botulinumC. cadaverisC. chauvoeiC. clostridioformeC. cochleariumC. cocleatumC. difficileC. fallaxC. ghoniiC. hastiformeC. histolyticumC. innocuumC. irregulareC. limosumC. lituseburenseC. malenominatumC. mangenotiiC. novyiC. oroticum

Clostridium (continued)C. paraputrificumC. pasteurianumC. perfringensC. purinilyticumC. ramosumC. saccharolyticumC. scatologenesC. sordelliiC. sphenoidesC. sporogenesC. sporosphaeroidesC. subterminaleC. tertiumC. tetani

CobetiaC. marina

Comamonas* C. kerstersii

C. terrigenaC. testosteroni

CorynebacteriumC. accolensC. afermentansC. ammoniagenesC. amycolatumC. argentoratenseC. auris

* C. auriscanisC. bovisC. callunaeC. confusumC. coyleaeC. cystitidisC. diphtheriaeC. falsenii

* C. felinumC. flavescensC. glucuronolyticumC. glutamicumC. hoagiiC. imitansC. jeikeiumC. kutscheriC. lipophiloflavumC. macginleyiC. matruchotii

Page 8: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

D16S2 version 2.10

* New in version 2.10

MIDI Inc. © 2008 Page 8 of 60 June 2008

Corynebacterium (continued)C. minutissimumC. mucifaciensC. mycetoidesC. pilosumC. propinquumC. pseudodiphtheriticumC. pseudotuberculosisC. renaleC. riegeliiC. seminale

* C. singulareC. striatumC. ulceransC. urealyticumC. variabileC. vitaeruminisC. xerosis

CouchioplanesC. caeruleus

CryptosporangiumC. minutisporangius (was Actinoplanes)

CupriavidusC. necator (was Ralstonia-eutropha)

CurtobacteriumC. albidumC. citreumC. luteumC. pusillum

CytophagaC. hutchinsonii

DactylosporangiumD. fulvumD. roseum

DeinococcusD. proteolyticusD. radioduransD. radiophilusD. radiopugnans

DelftiaD. acidovorans

DermabacterD. hominis

DermacoccusD. nishinomiyaensis

Dermatophilus* D. chelonae

D. congolensis

DesemziaD. incerta

DevosiaD. riboflavina

DichelobacterD. nodosus

DichotomicrobiumD. thermohalophilum

DietziaD. maris

EdwardsiellaE. hoshinaeE. ictaluriE. tarda

EggerthellaE. lenta

EikenellaE. corrodens

ElizabethkingiaE. meningoseptica (was Chryseobacterium)

* E. miricola

EmpedobacterE. brevis

EntericE. group 53

Page 9: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

D16S2 version 2.10

* New in version 2.10

MIDI Inc. © 2008 Page 9 of 60 June 2008

EnterobacterE. aerogenesE. amnigenusE. asburiaeE. cancerogenusE. cloacaeE. gergoviaeE. hormaechei

* E. kobeiE. nimipressuralisE. pyrinusE. sakazakii

Enterococcus* E. asini

E. avium* E. canis

E. casseliflavusE. cecorumE. columbaeE. disparE. duransE. faecalisE. faeciumE. flavescensE. gallinarum

* E. hermanniensisE. hiraeE. malodoratusE. mundtiiE. pseudoaviumE. raffinosus

* E. rattiE. saccharolyticusE. sulfureus

* E. villorum

ErwiniaE. amylovoraE. rhapontici

ErysipelothrixE. rhusiopathiaeE. tonsillarum

EscherichiaE. blattaeE. coliE. fergusoniiE. hermanniiE. vulneris

EubacteriumE. contortumE. dolichumE. limosumE. multiformeE. tenue

EwingellaE. americana

ExiguobacteriumE. acetylicum

* E. undae

FilifactorF. alocis

FilomicrobiumF. fusiforme

FlavobacteriumF. hydatisF. johnsoniae

* F. mizutaiiF. pectinovorumF. saccharophilum

FlexibacterF. aurantiacus

FluoribacterF. bozemanaeF. dumoffiiF. gormanii

FrancisellaF. philomiragia

FrateuriaF. aurantia

FusobacteriumF. gonidiaformansF. mortiferumF. necrophorumF. nucleatumF. periodonticumF. russiiF. ulceransF. varium

Page 10: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

D16S2 version 2.10

* New in version 2.10

MIDI Inc. © 2008 Page 10 of 60 June 2008

GallibacteriumG. anatis (was Pasteurella)

GardnerellaG. vaginalis

Gemella* G. cuniculi

G. haemolysansG. morbillorum

Geobacillus* G. caldoxyosilyticus* G. debilis* G. gargensis

G. kaustophilus* G. pallidus

G. stearothermophilus* G. tepidamans

G. thermocatenulatus* G. thermodenitrificans

G. thermoglucosidasiusG. thermoleovorans

* G. toebii* G. uzenensis* G. vulcani

GlobicatellaG. sanguinis

GluconacetobacterG. liquefaciensG. xylinus

GluconobacterG. asaiiG. oxydans

GordoniaG. aichiensisG. amaraeG. bronchialis

* G. otitidisG. rubripertinctaG. sputiG. terrae

GracilibacillusG. dipsosauri

GrimontiaG. hollisae

HaemophilusH. haemolyticusH. influenzaeH. paracuniculusH. parahaemolyticusH. parainfluenzaeH. paraphrohaemolyticusH. parasuisH. piscium

* H. pittmaniae

HafniaH. alvei

Halomonas* H. alimentaria

H. aquamarinaH. cupidaH. elongataH. halophilaH. pacificaH. salinaH. venusta

Helcococcus* H. kunzii

HelicobacterH. acinonychisH. canisH. hepaticusH. muridarumH. mustelaeH. pametensisH. pullorumH. pylori

HerbaspirillumH. autotrophicum (was Aquaspirillum)H. huttiense (was Pseudomonas)H. rubrisubalbicans

HerbidosporaH. cretacea

Hydrogenophaga* H. atypica

H. flavaH. palleroniiH. pseudoflavaH. taeniospiralis

Page 11: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

D16S2 version 2.10

* New in version 2.10

MIDI Inc. © 2008 Page 11 of 60 June 2008

HyphomicrobiumH. aestuariiH. hollandicumH. zavarzinii

HyphomonasH. neptuniumH. oceanitis

IntrasporangiumI. calvum

IodobacterI. fluviatilis

Janibacter* J. terrae

JanthinobacteriumJ. lividum

JonesiaJ. denitrificans

KibdelosporangiumK. aridum

KineosporiaK. aurantiacaK. mikuniensisK. rhamnosaK. rhizophilaK. succinea

KingellaK. denitrificans

KlebsiellaK. oxytocaK. pneumoniae

* K. singaporensis

KluyveraK. ascorbataK. cryocrescensK. georgianaK. intermedia (was Enterobacter)

Kocuria* K. carniphila

K. kristinae* K. rhizophila

K. roseaK. varians

Kribbella* K. solani

KurthiaK. gibsoniiK. zopfii

KutzneriaK. albidaK. viridogrisea

Kytococcus* K. schroeteri

K. sedentarius

LabrysL. monachus

LactobacillusL. acetotoleransL. acidophilus

* L. agilisL. alimentariusL. amylovorusL. animalisL. bifermentansL. brevisL. buchneriL. caseiL. collinoidesL. coryniformisL. curvatusL. delbrueckiiL. farciminisL. fermentumL. fructivoransL. gasseriL. graminisL. helveticusL. hilgardii

* L. intestinalisL. jensenii

* L. johnsoniiL. kefiri

Page 12: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

D16S2 version 2.10

* New in version 2.10

MIDI Inc. © 2008 Page 12 of 60 June 2008

Lactobacillus (continued)L. malefermentansL. maliL. murinusL. orisL. parabuchneriL. paracaseiL. pentosusL. plantarumL. reuteriL. rhamnosusL. ruminisL. sakeiL. salivariusL. sanfranciscensis

* L. sharpeaeL. suebicusL. vaccinostercusL. vaginalis

LactococcusL. garvieaeL. lactisL. plantarumL. raffinolactis

Lautropia* L. mirabilis

LechevalieriaL. aerocolonigenesL. flava

LeclerciaL. adecarboxylata

LeeuwenhoekiellaL. marinoflava (was Cytophaga)

LegionellaL. adelaidensisL. anisaL. birminghamensisL. brunensisL. cherriiL. cincinnatiensisL. erythraL. fairfieldensisL. feeleiiL. geestianaL. gratiana

Legionella (continued)L. hackeliaeL. israelensisL. jamestowniensisL. jordanisL. lansingensisL. londiniensisL. longbeachaeL. moravicaL. nautarumL. oakridgensisL. parisiensisL. pneumophilaL. quateirensisL. quinlivaniiL. rubrilucensL. sainthelensiL. santicrucisL. shakespeareiL. spiritensisL. steigerwaltiiL. tucsonensisL. wadsworthiiL. worsleiensis

LeifsoniaL. aquatica

LeminorellaL. grimontiiL. richardii

Lentzea* L. californiensis

LeuconostocL. carnosumL. citreumL. fructosum (was Lactobacillus)L. gelidum

* L. lactisL. mesenteroidesL. pseudomesenteroides

ListeriaL. grayiL. innocuaL. ivanoviiL. monocytogenesL. seeligeriL. welshimeri

Page 13: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

D16S2 version 2.10

* New in version 2.10

MIDI Inc. © 2008 Page 13 of 60 June 2008

ListonellaL. pelagia

Luteococcus* L. sanguinis

MacrococcusM. caseolyticus

MalikiaM. spinosa (was Pseudomonas)

MannheimiaM. haemolytica

MaricaulisM. maris

MarinibacillusM. marinus

MarinobacterM. hydrocarbonoclasticus

MarinobacteriumM. stanieri (was Pseudomonas)

Marinomonas* M. vaga

MethylobacteriumM. aminovorans

* M. aquaticumM. extorquensM. fujisawaenseM. mesophilicumM. organophilumM. radiotoleransM. rhodesianumM. rhodinumM. zatmanii

MethylorhabdusM. multivorans

Methylosarcina* M. fibrata

Microbacterium* M. aerolatum

M. arabinogalactanolyticumM. arborescensM. aurantiacumM. aurumM. barkeriM. chocolatumM. dextranolyticumM. esteraromaticumM. flavescensM. hominis

* M. hydrocarbonoxydansM. imperialeM. keratanolyticumM. ketosireducensM. lacticumM. laevaniformansM. liquefaciensM. luteolumM. maritypicumM. oxydans

* M. paraoxydans* M. phyllosphaerae* M. resistens

M. saperdaeM. schleiferiM. terraeM. testaceumM. thalassiumM. trichothecenolyticum

* M. ulmi

MicrobisporaM. rosea

MicrococcusM. luteusM. lylae

Page 14: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

D16S2 version 2.10

* New in version 2.10

MIDI Inc. © 2008 Page 14 of 60 June 2008

MicromonosporaM. aurantiacaM. “brunnescens"M. carbonaceaM. chalceaM. coeruleaM. echinosporaM. “fusca"M. “globosa"M. halophyticaM. “lacustris"M. “lilacina"M. nigraM. olivasterosporaM. “parva"M. purpureaM. purpureochromogenesM. sagamiensisM. “yulongensis"

MobiluncusM. curtisiiM. mulieris

MoellerellaM. wisconsensis

MoraxellaM. atlantae

* M. boevreiM. bovis

* M. bovoculiM. canisM. catarrhalisM. caviaeM. cuniculiM. lacunataM. lincolniiM. nonliquefaciensM. osloensisM. ovis

MorganellaM. morganii

MycobacteriumM. abscessusM. agriM. aichienseM. alveiM. asiaticumM. aurumM. austroafricanumM. avium

* M. boenickeiM. bohemicumM. bovis BCG PasteurM. branderi

* M. brisbanenseM. brumae

* M. canariasenseM. celatumM. chelonaeM. chimaeraM. chitaeM. chlorophenolicumM. chubuenseM. confluentisM. conspicuumM. cookii

* M. cosmeticumM. diernhoferi

* M. doricumM. duvaliiM. fallaxM. farcinogenesM. flavescens

* M. florentinumM. fortuitumM. gadiumM. gastriM. genavenseM. gilvumM. goodiiM. gordonaeM. haemophilumM. hassiacumM. heidelbergenseM. hiberniaeM. hodleri

* M. holsaticumM. houstonense

* M. immunogenumM. interjectumM. intermediumM. intracellulareM. kansasii

Page 15: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

D16S2 version 2.10

* New in version 2.10

MIDI Inc. © 2008 Page 15 of 60 June 2008

Mycobacterium (continued)M. komossense

* M. lacusM. madagascarienseM. mageritenseM. malmoenseM. marinumM. microtiM. moriokaenseM. mucogenicumM. murale

* M. nebraskenseM. neoaurumM. neworleansenseM. nonchromogenicumM. novocastrenseM. obuense

* M. palustreM. parafortuitum

* M. parmenseM. peregrinumM. phleiM. porcinumM. poriferaeM. pulverisM. rhodesiae

* M. saskatchewanenseM. scrofulaceumM. senegalenseM. septicumM. shimoideiM. simiaeM. smegmatisM. sphagniM. szulgaiM. terraeM. thermoresistibileM. tokaienseM. triplexM. trivialeM. tuberculosis complexM. tusciaeM. vaccaeM. wolinskyiM. xenopi

Mycoplana* M. ramosa

MycoplasmaM. hominisM. salivarium

MyroidesM. odoratus

NeisseriaN. animalisN. canisN. cinereaN. elongataN. flavescensN. gonorrhoeaeN. iguanaeN. lactamicaN. macacaeN. meningitidisN. mucosaN. siccaN. subflavaN. weaveri

NesterenkoniaN. halobia

Nitrobacter* N. winogradskyi

Nocardia* N. africana* N. anaemiae* N. aobensis* N. araoensis* N. arthritidis* N. asiatica

N. asteroidesN. brasiliensisN. brevicatenaN. carnea

* N. concava* N. cyriacigeorgica* N. elegans

N. farcinica* N. fluminea* N. higoensis* N. ignorata* N. inohanensis* N. kruczakiae* N. niigatensis

N. nova

Page 16: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

D16S2 version 2.10

* New in version 2.10

MIDI Inc. © 2008 Page 16 of 60 June 2008

Nocardia (continued)N. otitidiscaviarum

* N. paucivorans* N. pneumoniae

N. pseudobrasiliensis* N. puris

N. seriolae* N. thailandica

N. transvalensis* N. vermiculata* N. veterana* N. yamanashiensis

NocardioidesN. albusN. luteus

* N. plantarumN. simplex

NocardiopsisN. dassonvillei

* N. exhalans* N. trehalosi

ObesumbacteriumO. proteus

OceanimonasO. doudoroffii

Oceanobacillus* O. picturae

OchrobactrumO. anthropi

* O. gallinifaecis

OerskoviaO. enterophila (was Promicromonospora)O. turbata

OligellaO. ureolyticaO. urethralis

OligotrophaO. carboxidovorans

Ornithobacterium* O. rhinotracheale

Paenibacillus* P. agarexedens

P. alginolyticusP. alveiP. amylolyticus

* P. anaericanusP. apiariusP. azotofixans

* P. borealisP. brasilensis

* P. chibensis* P. chinjuensis

P. chitinolyticus (was Bacillus)P. chondroitinus

* P. cineris* P. cookii

P. curdlanolyticusP. ehimensis (was Bacillus)

* P. favisporusP. glucanolyticus

* P. glycanilyticus* P. graminis* P. illinoisensis* P. lactis

P. larvaeP. lautusP. lentimorbusP. maceransP. macquariensis

* P. massiliensis* P. naphthalenovorans

P. nematophilus* P. odorifer

P. pabuli* P. phyllosphaerae

P. polymyxaP. popilliae

* P. rhizosphaerae* P. stellifer* P. terrae

P. thiaminolyticus* P. timonensis* P. turicensis

P. validus

Pandoraea* P. apista* P. norimbergensis* P. pnomenusa

Page 17: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

D16S2 version 2.10

* New in version 2.10

MIDI Inc. © 2008 Page 17 of 60 June 2008

PantoeaP. agglomeransP. ananatis

* P. citreaP. dispersaP. stewartii

Parabacteroides (was Bacterioides)P. distasonisP. merdae

ParacoccusP. denitrificans

ParvimonasP. micros (was Micromonas)

PasteurellaP. aerogenesP. bettyaeP. caballiP. canisP. dagmatisP. langaaensisP. mairiiP. multocidaP. pneumotropicaP. stomatisP. testudinis

PaucimonasP. lemoignei

PectobacteriumP. carotovorumP. cypripedii

PediococcusP. acidilacticiP. damnosusP. dextrinicusP. parvulusP. pentosaceus

PedobacterP. heparinus

PedomicrobiumP. americanumP. ferrugineum

PelomonasP. saccharophila (was Pseudomonas)

PeptococcusP. niger

PeptoniphilusP. lacrimalis

PeptostreptococcusP. anaerobius

PhotobacteriumP. damselae

PhotorhabdusP. luminescens

PhyllobacteriumP. myrsinacearumP. rubiacearum

PlanobisporaP. longispora

PlanococcusP. citreusP. kocurii

PlanomonosporaP. parontospora

PlesiomonasP. shigelloides

PorphyromonasP. catoniaeP. circumdentaria

PragiaP. fontium

PrauserellaP. rugosa

Page 18: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

D16S2 version 2.10

* New in version 2.10

MIDI Inc. © 2008 Page 18 of 60 June 2008

PrevotellaP. buccaeP. buccalisP. corporisP. denticolaP. disiensP. heparinolyticaP. nigrescensP. oralisP. orisP. oulorumP. zoogleoformans

PropionibacteriumP. acnesP. avidumP. jenseniiP. propionicum

ProsthecomicrobiumP. enhydrumP. hirschiiP. pneumaticum

ProteusP. mirabilisP. myxofaciensP. penneriP. vulgaris

ProvidenciaP. alcalifaciensP. heimbachaeP. rettgeriP. rustigianiiP. stuartii

PseudoalteromonasP. atlanticaP. carrageenovoraP. espejianaP. haloplanktisP. luteoviolaceaP. nigrifaciensP. undina

PseudomonasP. aeruginosaP. agariciP. alcaligenesP. amygdaliP. anguillisepticaP. antimicrobicaP. aspleniiP. aurantiaca

* P. avellanaeP. balearicaP. boreopolis

* P. brassicacearum* P. brenneri

P. carboxydohydrogena* P. cedrina

P. cichoriiP. citronellolis

* P. congelans* P. constantinii

P. corrugata* P. cremoricolorata* P. extremorientalis

P. flavescensP. fluorescensP. fragi

* P. frederiksbergensisP. fulvaP. fuscovaginae

* P. gessardii* P. graminis* P. grimontii* P. indica* P. kilonensis

P. lundensis* P. lutea

P. marginalisP. mendocinaP. mephitica

* P. monteilii* P. mosselii

P. mucidolensP. nitroreducensP. oleovorans

* P. orientalisP. oryzihabitans (was Flavimonas)P. palleronianaP. pertucinogenaP. pictorum

* P. poae

Page 19: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

D16S2 version 2.10

* New in version 2.10

MIDI Inc. © 2008 Page 19 of 60 June 2008

Pseudomonas (continued)* P. proteolytica

P. pseudoalcaligenesP. putidaP. resinovorans

* P. rhizosphaeraeP. savastanoiP. stramineaP. stutzeriP. synxanthaP. syringaeP. taetrolens

* P. thermotoleransP. tolaasii

* P. trivialisP. veroniiP. viridiflava

Pseudonocardia* P. autotrophica

PseudorhodobacterP. ferrugineus

PsychrobacterP. immobilisP. phenylpyruvicus

RahnellaR. aquatilis

RalstoniaR. pickettiiR. solanacearumR. syzygii (was Pseudomonas)

RaoultellaR. ornithinolyticaR. planticolaR. terrigena

RathayibacterR. rathayiR. tritici

RhizobiumR. radiobacter (was Agrobacterium)R. rhizogenes (was Agrobacterium)R. rubi

RhodobacterR. capsulatusR. sphaeroides

RhodococcusR. coprophilusR. corynebacterioides (was Nocardia)R. erythropolisR. fasciansR. globerulus

* R. gordoniaeR. opacusR. rhodniiR. rhodochrousR. ruber

* R. triatomaeR. wratislaviensisR. zopfii

RhodopseudomonasR. palustris

RiemerellaR. anatipestifer

RoseomonasR. cervicalisR. fauriaeR. genomospecies 4R. genomospecies 5R. genomospecies 6

* R. gilardii

RothiaR. dentocariosaR. mucilaginosa

RubrivivaxR. gelatinosus

Rubrobacter* R. radiotolerans

RuegeriaR. atlantica

RuminococcusR. productus

Page 20: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

D16S2 version 2.10

* New in version 2.10

MIDI Inc. © 2008 Page 20 of 60 June 2008

SaccharothrixS. coeruleofuscaS. mutabilis

SalegentibacterS. salegens

SalimicrobiumS. halophilum (was Bacillus)

SalmonellaS. bongoriS. enterica (includes choleraesuis,

enteritidis)S. typhiS. typhimurium

SelenomonasS. artemidisS. ruminantiumS. sputigena

SerratiaS. entomophilaS. ficariaS. fonticolaS. grimesiiS. marcescensS. odoriferaS. plymuthicaS. proteamaculansS. rubidaea

ShewanellaS. algaeS. hanedaiS. putrefaciens

ShigellaS. boydiiS. dysenteriaeS. flexneriS. sonnei

SimplicispiraS. metamorpha (was Aquaspirillum)

SkermaniaS. piniformis

SphingobacteriumS. faeciumS. multivorumS. spiritivorumS. thalpophilum

SphingobiumS. chlorophenolicum (was Sphingomonas)S. yanoikuyae (was Sphingomonas)

SphingomonasS. adhaesivaS. capsulataS. echinoidesS. parapaucimobilisS. paucimobilisS. sanguinis

SphingopyxisS. macrogoltabida (was Sphingomonas)S. terrae (was Sphingomonas)

SporolactobacillusS. laevolacticus (was Bacillus)

SporosarcinaS. globisporaS. pasteuriiS. psychrophilaS. ureae

StaphylococcusS. arlettaeS. aureusS. auricularisS. capitisS. capraeS. carnosusS. chromogenesS. cohniiS. delphiniS. epidermidisS. equorumS. felisS. gallinarumS. haemolyticusS. hominisS. hyicusS. intermediusS. kloosii

Page 21: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

D16S2 version 2.10

* New in version 2.10

MIDI Inc. © 2008 Page 21 of 60 June 2008

Staphylococcus (continued)S. lentusS. lugdunensisS. muscaeS. pasteuriS. piscifermentansS. pulvereriS. saprophyticusS. schleiferiS. sciuriS. simulansS. vitulinusS. warneriS. xylosus

StenotrophomonasS. maltophilia

StreptobacillusS. moniliformis

StreptococcusS. acidominimusS. agalactiaeS. alactolyticusS. anginosusS. bovisS. canisS. constellatusS. cricetiS. cristatusS. downeiS. dysgalactiaeS. equiS. equinusS. ferusS. gordoniiS. hyointestinalis

* S. hyovaginalis* S. infantis

S. iniaeS. intermediusS. macacaeS. mitisS. mutansS. oralisS. parasanguinisS. parauberis

* S. perorisS. pleomorphusS. pneumoniae

Streptococcus (continued)S. porcinusS. pyogenesS. rattiS. salivariusS. sanguinisS. sobrinusS. suisS. thermophilusS. uberisS. vestibularis

StreptomycesS. acrimyciniS. afghaniensisS. albusS. althioticusS. antibioticusS. arenaeS. armeniacusS. aurantiogriseusS. aureocirculatusS. blastmyceticusS. bobiliS. californicusS. candidusS. cavourensisS. cellulosaeS. chattanoogensisS. chibaensisS. chrysomallusS. cinereoruberS. cinnabarinusS. cinnamoneusS. citreofluorescensS. coelicolorS. coeruleuprunusS. collinusS. cremeusS. diastaticusS. durhamensisS. enissocaesilisS. finlayiS. flaveolusS. fragilisS. gougerotiiS. griseinusS. griseoaurantiacusS. griseocarneusS. griseoflavusS. griseoplanusS. griseorubens

Page 22: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

D16S2 version 2.10

* New in version 2.10

MIDI Inc. © 2008 Page 22 of 60 June 2008

Streptomyces (continued)S. griseosporeusS. griseusS. herbaricolorS. intermediusS. ipomoeaeS. janthinusS. lateritiusS. lavendulaeS. lienomyciniS. limosusS. lomondensisS. longisporoflavusS. longispororuberS. longisporusS. lucensisS. luridusS. lusitanusS. luteogriseusS. luteosporeusS. luteoverticillatusS. lydicusS. malachitofuscusS. malaysiensisS. massasporeusS. megasporusS. minutiscleroticusS. mirabilisS. misakiensisS. mobaraensisS. morookaenseS. murinusS. narbonensisS. nashvillensisS. netropsisS. neyagawaensisS. nigrescensS. nitrosporeusS. niveoruberS. nodosusS. nogalaterS. odoriferS. olivaceiscleroticusS. olivaceoviridisS. olivoverticillatusS. olivoviridisS. omiyaensisS. orinociS. pactumS. parvisporogenesS. peucetiusS. phaeochromogenes

Streptomyces (continued)S. polychromogenes

* S. purpureusS. rimosusS. roseoverticillatusS. septatusS. somaliensisS. tuirusS. violaceoruber

StreptosporangiumS. fragileS. nondiastaticumS. pseudovulgareS. roseumS. vulgare

SuttonellaS. indologenes

TatlockiaT. maceacherniiT. micdadei

TatumellaT. ptyseos

Taylorella* T. equigenitalis

TerrabacterT. tumescens

TerrimonasT. ferruginea (was Flavobacterium)

TetragenococcusT. halophilusT. solitarius (was Enterococcus)

TetrasphaeraT. duodecadis (was Arthrobacter)

ThermomonosporaT. curvata

TrabulsiellaT. guamensis

Page 23: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

D16S2 version 2.10

* New in version 2.10

MIDI Inc. © 2008 Page 23 of 60 June 2008

TsukamurellaT. inchonensisT. paurometabolaT. pulmonisT. tyrosinosolvens

TuricellaT. otitidis

UreibacillusU. thermosphaericus

VagococcusV. fluvialis

VariovoraxV. paradoxus

VeillonellaV. atypicaV. disparV. parvulaV. rodentium

VibrioV. aestuarianusV. alginolyticusV. campbelliiV. choleraeV. cincinnatiensisV. diazotrophicus

* V. fischeriV. fluvialisV. furnissii

* V. harveyiV. mediterraneiV. metschnikoviiV. mimicus

* V. natriegensV. tubiashiiV. vulnificus

VirgibacillusV. halodenitrificans (was Bacillus)V. pantothenticus

* V. proomii

VogesellaV. indigofera

WeeksellaW. virosa

WeissellaW. confusaW. halotoleransW. kandleriW. minorW. paramesenteroidesW. viridescens

WolinellaW. succinogenes

XanthobacterX. agilisX. autotrophicusX. flavus

XanthomonasX. axonopodisX. campestrisX. fragariaeX. hyacinthiX. translucens

XenorhabdusX. beddingiiX. bovieniiX. nematophilaX. poinarii

YersiniaY. aldovae

* Y. aleksiciaeY. bercovieriY. enterocoliticaY. frederikseniiY. intermediaY. kristenseniiY. mollaretiiY. pseudotuberculosisY. rohdeiY. ruckeri

YokenellaY. regensburgei

ZobelliaZ. uliginosaA. xylosoxidansY. regensburgei

Page 24: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

MD16S2 version 2.10

* New in version 2.10

MIDI Inc. © 2008 Page 24 of 60 June 2008

AbiotrophiaA. defectiva

AcetobacterA. aceti

AchromobacterA. piechaudiiA. xylosoxidans

AcidovoraxA. avenaeA. delafieldiiA. facilisA. konjaciA. temperans

AcinetobacterA. baumanniiA. calcoaceticusA. genomospecies 10A. genomospecies 11A. genomospecies 13A. genomospecies 14A. genomospecies 16A. genomospecies 3A. genomospecies 6A. genomospecies 9A. haemolyticusA. johnsoniiA. juniiA. lwoffiiA. radioresistens

ActinobacillusA. capsulatusA. equuliA. hominisA. lignieresiiA. pleuropneumoniaeA. rossiiA. seminisA. suisA. ureae

ActinocoralliaA. libanotica

ActinokineosporaA. riparia

ActinomaduraA. kijaniataA. maduraeA. oligosporaA. pelletieri

ActinomycesA. bovisA. howelliiA. meyeriA. naeslundiiA. neuiiA. radingaeA. slackiiA. viscosus

ActinoplanesA. auranticolorA. deccanensisA. durhamensisA. ferrugineusA. globisporusA. humidusA. italicusA. missouriensisA. yunnanensis

ActinosynnemaA. pretiosum

AerococcusA. urinaeA. viridans

AeromonasA. bestiarumA. caviaeA. enteropelogenesA. eucrenophilaA. hydrophilaA. jandaeiA. salmonicidaA. schubertiiA. sobriaA. trotaA. veronii

AfipiaA. broomeaeA. felis

Page 25: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

MD16S2 version 2.10

* New in version 2.10

MIDI Inc. © 2008 Page 25 of 60 June 2008

Aggregatibacter (was Haemophilus)A. actinomycetemcomitansA. aphrophilus

AgromycesA. mediolanus

AlcaligenesA. faecalis

AlkalibacillusA. haloalkaliphilus (was Bacillus)

AlloiococcusA. otitis

AlteromonasA. macleodii

AminobacterA. heintzii (was Chelatobacter)

AmycolatopsisA. mediterraneiA. orientalis

AnaerococcusA. hydrogenalisA. prevotiiA. tetradiusA. vaginalis

AncalomicrobiumA. adetum

AneurinibacillusA. aneurinilyticusA. migulanus

AquaspirillumA. peregrinumA. polymorphum

ArcanobacteriumA. bernardiaeA. haemolyticumA. pyogenes

ArcobacterA. butzleri

ArthrobacterA. agilisA. atrocyaneusA. aurescensA. citreusA. crystallopoietesA. cumminsiiA. globiformisA. histidinolovoransA. ilicisA. mysorensA. nicotianaeA. oxydansA. pascensA. protophormiaeA. ramosusA. uratoxydansA. ureafaciensA. woluwensis

AsticcacaulisA. biprostheciumA. excentricus

AtopobiumA. fossorA. minutumA. rimae

AvibacteriumA. avium (was Pasteurella)A. gallinarum (was Pasteurella)A. volantium (was Pasteurella)

AzohydromonasA. lata (was Alcaligenes)

BacillusB. agaradhaerensB. alcalophilusB. amyloliquefaciensB. atrophaeusB. azotoformansB. badiusB. cereusB. circulansB. clarkiiB. clausiiB. coagulansB. cohniiB. fastidiosus

Page 26: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

MD16S2 version 2.10

* New in version 2.10

MIDI Inc. © 2008 Page 26 of 60 June 2008

Bacillus (continued)B. firmusB. flexusB. fusiformisB. gibsoniiB. halmapalusB. haloduransB. horikoshiiB. insolitusB. lentusB. licheniformisB. megateriumB. mojavensisB. mycoidesB. niaciniB. oleroniusB. pseudalcaliphilusB. pseudofirmusB. psychrosaccharolyticusB. pumilusB. schlegeliiB. simplexB. smithiiB. sphaericusB. sporothermoduransB. subtilisB. thuringiensis

BacteroidesB. caccaeB. eggerthiiB. fragilisB. ovatusB. stercorisB. thetaiotaomicronB. uniformisB. ureolyticusB. vulgatus

BartonellaB. elizabethaeB. henselaeB. vinsonii

BibersteiniaB. trehalosi (was Pasteurella)

BifidobacteriumB. asteroidesB. boumB. catenulatumB. infantisB. longum

BordetellaB. aviumB. bronchisepticaB. hinziiB. parapertussisB. pertussisB. trematum

BradyrhizobiumB. sp.

BrenneriaB. quercinaB. rubrifaciensB. salicis

BrevibacillusB. agriB. borstelensisB. brevisB. centrosporusB. choshinensisB. formosusB. laterosporusB. parabrevisB. reuszeri

BrevibacteriumB. caseiB. epidermidisB. frigoritoleransB. halotoleransB. iodinumB. linensB. mcbrellneriB. stationis

BrevundimonasB. diminutaB. intermediaB. variabilisB. vesicularis

BrochothrixB. campestrisB. thermosphacta

BudviciaB. aquatica

Page 27: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

MD16S2 version 2.10

* New in version 2.10

MIDI Inc. © 2008 Page 27 of 60 June 2008

BurkholderiaB. andropogonisB. caryophylliB. cepaciaB. gladioliB. glatheiB. glumaeB. phenaziniumB. plantarii

ButtiauxellaB. agrestisB. noackiae

CampylobacterC. coliC. curvusC. fetusC. gracilisC. helveticusC. hyointestinalisC. jejuniC. mucosalisC. rectusC. upsaliensis

CapnocytophagaC. canimorsusC. cynodegmiC. haemolyticaC. ochracea

CarbophilusC. carboxidus

CardiobacteriumC. hominis

CarnobacteriumC. divergensC. gallinarumC. maltaromicus (was Lactobacillus)C. mobile

CaulobacterC. fusiformisC. henriciiC. leidyi

CedeceaC. davisaeC. lapageiC. neteri

CellulomonasC. biazoteaC. cellaseaC. fimiC. flavigenaC. gelidaC. hominisC. humilataC. uda

CellulosimicrobiumC. cellulans

ChelatococcusC. asaccharovorans

ChitinophagaC. arvensicola (was Cytophaga)

ChromobacteriumC. violaceum

ChryseobacteriumC. indoltheticum

ChryseomonasC. luteola

CitrobacterC. amalonaticusC. braakiiC. farmeriC. freundiiC. koseriC. rodentiumC. sedlakiiC. werkmaniiC. youngae

ClavibacterC. michiganensis

Page 28: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

MD16S2 version 2.10

* New in version 2.10

MIDI Inc. © 2008 Page 28 of 60 June 2008

ClostridiumC. absonumC. argentinenseC. baratiiC. beijerinckiiC. bifermentansC. botulinumC. cadaverisC. clostridioformeC. cochleariumC. cocleatumC. difficileC. fallaxC. ghoniiC. hastiformeC. histolyticumC. innocuumC. irregulareC. limosumC. lituseburenseC. malenominatumC. mangenotiiC. novyiC. oroticumC. paraputrificumC. pasteurianumC. perfringensC. purinilyticumC. ramosumC. saccharolyticumC. scatologenesC. sordelliiC. sphenoidesC. sporogenesC. sporosphaeroidesC. subterminaleC. tertiumC. tetani

CobetiaC. marina

ComamonasC. terrigenaC. testosteroni

CorynebacteriumC. accolensC. afermentansC. ammoniagenesC. amycolatumC. argentoratenseC. aurisC. bovisC. callunaeC. confusumC. coyleaeC. cystitidisC. diphtheriaeC. falseniiC. flavescensC. glucuronolyticumC. glutamicumC. hoagiiC. imitansC. jeikeiumC. kutscheriC. lipophiloflavumC. macginleyiC. matruchotiiC. minutissimumC. mucifaciensC. mycetoidesC. pilosumC. propinquumC. pseudodiphtheriticumC. pseudotuberculosisC. renaleC. riegeliiC. seminaleC. striatumC. ulceransC. urealyticumC. variabileC. vitaeruminisC. xerosis

CouchioplanesC. caeruleus

CryptosporangiumC. minutisporangius (was Actinoplanes)

CupriavidusC. necator (was Ralstonia-eutropha)

Page 29: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

MD16S2 version 2.10

* New in version 2.10

MIDI Inc. © 2008 Page 29 of 60 June 2008

CurtobacteriumC. albidumC. citreumC. luteumC. pusillum

CytophagaC. hutchinsonii

DactylosporangiumD. fulvumD. roseum

DeinococcusD. proteolyticusD. radioduransD. radiophilusD. radiopugnans

DelftiaD. acidovorans

DermabacterD. hominis

DermacoccusD. nishinomiyaensis

DermatophilusD. congolensis

DesemziaD. incerta

DevosiaD. riboflavina

DichelobacterD. nodosus

DichotomicrobiumD. thermohalophilum

DietziaD. maris

EdwardsiellaE. hoshinaeE. ictaluriE. tarda

EggerthellaE. lenta

EikenellaE. corrodens

EntericE. group 53

EnterobacterE. aerogenesE. amnigenusE. asburiaeE. cancerogenusE. cloacaeE. gergoviaeE. hormaecheiE. nimipressuralisE. pyrinusE. sakazakii

EnterococcusE. aviumE. casseliflavusE. cecorumE. columbaeE. disparE. duransE. faecalisE. faeciumE. flavescensE. gallinarumE. hiraeE. malodoratusE. mundtiiE. pseudoaviumE. raffinosusE. saccharolyticusE. sulfureus

ErwiniaE. amylovoraE. rhapontici

ErysipelothrixE. rhusiopathiaeE. tonsillarum

Page 30: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

MD16S2 version 2.10

* New in version 2.10

MIDI Inc. © 2008 Page 30 of 60 June 2008

EscherichiaE. blattaeE. coliE. fergusoniiE. hermanniiE. vulneris

EubacteriumE. contortumE. dolichumE. limosumE. multiformeE. tenue

EwingellaE. americana

ExiguobacteriumE. acetylicum

FilifactorF. alocis

FilomicrobiumF. fusiforme

FlavobacteriumF. hydatisF. johnsoniaeF. pectinovorumF. saccharophilum

FluoribacterF. bozemanaeF. dumoffiiF. gormanii

FrancisellaF. philomiragia

FrateuriaF. aurantia

FusobacteriumF. gonidiaformansF. mortiferumF. necrophorumF. nucleatumF. periodonticumF. russiiF. ulceransF. varium

GallibacteriumG. anatis (was Pasteurella)

GardnerellaG. vaginalis

GemellaG. haemolysansG. morbillorum

GeobacillusG. kaustophilusG. pallidus (was Bacillus)G. stearothermophilusG. thermocatenulatusG. thermoglucosidasiusG. thermoleovorans

GlobicatellaG. sanguinis

GluconacetobacterG. liquefaciensG. xylinus

GluconobacterG. asaiiG. oxydans

GordoniaG. aichiensisG. amaraeG. bronchialisG. rubripertinctaG. sputiG. terrae

GracilibacillusG. dipsosauri

GrimontiaG. hollisae

HaemophilusH. haemolyticusH. influenzaeH. paracuniculusH. parahaemolyticusH. parainfluenzaeH. paraphrohaemolyticusH. parasuisH. piscium

Page 31: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

MD16S2 version 2.10

* New in version 2.10

MIDI Inc. © 2008 Page 31 of 60 June 2008

HafniaH. alvei

HalomonasH. aquamarinaH. cupidaH. elongataH. halophilaH. pacificaH. salinaH. venusta

HelicobacterH. acinonychisH. canisH. hepaticusH. mustelaeH. pametensisH. pullorumH. pylori

HerbaspirillumH. autotrophicum (was Aquaspirillum)H. huttiense (was Pseudomonas)H. rubrisubalbicans

HydrogenophagaH. flavaH. palleroniiH. pseudoflavaH. taeniospiralis

HyphomicrobiumH. aestuariiH. hollandicumH. zavarzinii

HyphomonasH. neptuniumH. oceanitis

IodobacterI. fluviatilis

JanthinobacteriumJ. lividum

JonesiaJ. denitrificans

KibdelosporangiumK. aridum

KingellaK. denitrificans

KlebsiellaK. oxytocaK. pneumoniae

KluyveraK. ascorbataK. cryocrescensK. georgianaK. intermedia (was Enterobacter)

KocuriaK. kristinaeK. roseaK. varians

KurthiaK. gibsoniiK. zopfii

KutzneriaK. albida

KytococcusK. sedentarius

LabrysL. monachus

LactobacillusL. acetotoleransL. acidophilusL. alimentariusL. amylovorusL. bifermentansL. brevisL. buchneriL. caseiL. collinoidesL. coryniformisL. curvatusL. delbrueckiiL. farciminisL. fermentumL. fructivoransL. gasseriL. graminisL. helveticusL. hilgardiiL. jensenii

Page 32: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

MD16S2 version 2.10

* New in version 2.10

MIDI Inc. © 2008 Page 32 of 60 June 2008

Lactobacillus (continued)L. kefiriL. malefermentansL. maliL. orisL. parabuchneriL. paracaseiL. pentosusL. plantarumL. reuteriL. rhamnosusL. ruminisL. sakeiL. salivariusL. sanfranciscensisL. suebicusL. vaccinostercusL. vaginalis

LactococcusL. garvieaeL. lactisL. plantarumL. raffinolactis

LechevalieriaL. aerocolonigenesL. flava

LeclerciaL. adecarboxylata

LeeuwenhoekiellaL. marinoflava (was Cytophaga)

LegionellaL. adelaidensisL. anisaL. birminghamensisL. brunensisL. cherriiL. cincinnatiensisL. erythraL. fairfieldensisL. feeleiiL. geestianaL. gratianaL. hackeliaeL. israelensisL. jamestowniensisL. jordanisL. lansingensis

Legionella (continued)L. londiniensisL. longbeachaeL. moravicaL. nautarumL. oakridgensisL. parisiensisL. pneumophilaL. quateirensisL. quinlivaniiL. rubrilucensL. sainthelensiL. santicrucisL. shakespeareiL. spiritensisL. steigerwaltiiL. tucsonensisL. wadsworthiiL. worsleiensis

LeifsoniaL. aquatica

LeminorellaL. grimontiiL. richardii

LeuconostocL. citreumL. fructosum (was Lactobacillus)L. mesenteroidesL. pseudomesenteroides

ListeriaL. grayiL. innocuaL. ivanoviiL. monocytogenesL. seeligeriL. welshimeri

ListonellaL. pelagia

MacrococcusM. caseolyticus

MalikiaM. spinosa (was Pseudomonas)

MannheimiaM. haemolytica

Page 33: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

MD16S2 version 2.10

* New in version 2.10

MIDI Inc. © 2008 Page 33 of 60 June 2008

MaricaulisM. maris

MarinibacillusM. marinus

MarinobacterM. hydrocarbonoclasticus

MarinobacteriumM. stanieri (was Pseudomonas)

MethylobacteriumM. aminovoransM. extorquensM. fujisawaenseM. mesophilicumM. organophilumM. radiotoleransM. rhodesianumM. rhodinumM. zatmanii

MethylorhabdusM. multivorans

MicrobacteriumM. arabinogalactanolyticumM. arborescensM. aurantiacumM. aurumM. barkeriM. chocolatumM. dextranolyticumM. esteraromaticumM. flavescensM. hominisM. imperialeM. keratanolyticumM. ketosireducensM. lacticumM. laevaniformansM. liquefaciensM. luteolumM. maritypicumM. oxydansM. saperdaeM. schleiferiM. terraeM. testaceumM. thalassiumM. trichothecenolyticum

MicrobisporaM. rosea

MicrococcusM. luteusM. lylae

MicromonosporaM. aurantiacaM. “brunnescens"M. carbonaceaM. chalceaM. coeruleaM. echinosporaM. “fusca"M. “globosa"M. halophyticaM. “lacustris"M. “lilacina"M. nigraM. olivasterosporaM. purpureaM. purpureochromogenesM. sagamiensisM. “yulongensis"

MobiluncusM. curtisiiM. mulieris

MoellerellaM. wisconsensis

MoraxellaM. atlantaeM. bovisM. canisM. catarrhalisM. caviaeM. cuniculiM. lacunataM. lincolniiM. nonliquefaciensM. osloensisM. ovis

MorganellaM. morganii

Page 34: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

MD16S2 version 2.10

* New in version 2.10

MIDI Inc. © 2008 Page 34 of 60 June 2008

MycobacteriumM. abscessusM. agriM. aichienseM. alveiM. asiaticumM. aurumM. austroafricanumM. aviumM. bohemicumM. bovis BCG PasteurM. branderiM. brumaeM. celatumM. chelonaeM. chitaeM. chlorophenolicumM. chubuenseM. confluentisM. conspicuumM. diernhoferiM. duvaliiM. fallaxM. farcinogenesM. flavescensM. fortuitumM. gadiumM. gastriM. genavenseM. gilvumM. goodiiM. gordonaeM. haemophilumM. hassiacumM. heidelbergenseM. hiberniaeM. hodleriM. interjectumM. intermediumM. intracellulareM. kansasiiM. komossenseM. madagascarienseM. mageritenseM. malmoenseM. marinumM. microtiM. moriokaenseM. mucogenicumM. muraleM. neoaurumM. nonchromogenicum

Mycobacterium (continued)M. obuenseM. parafortuitumM. peregrinumM. phleiM. porcinumM. poriferaeM. pulverisM. rhodesiaeM. scrofulaceumM. senegalenseM. septicumM. shimoideiM. simiaeM. smegmatisM. sphagniM. szulgaiM. terraeM. thermoresistibileM. tokaienseM. triplexM. trivialeM. tuberculosis complexM. tusciaeM. vaccaeM. wolinskyiM. xenopi

MycoplasmaM. hominisM. salivarium

MyroidesM. odoratus

NeisseriaN. animalisN. canisN. cinereaN. elongataN. flavescensN. gonorrhoeaeN. iguanaeN. lactamicaN. macacaeN. meningitidisN. mucosaN. siccaN. subflavaN. weaveri

NesterenkoniaN. halobia

Page 35: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

MD16S2 version 2.10

* New in version 2.10

MIDI Inc. © 2008 Page 35 of 60 June 2008

NocardiaN. asteroidesN. brasiliensisN. brevicatenaN. farcinicaN. novaN. otitidiscaviarumN. seriolaeN. transvalensis

NocardioidesN. albusN. luteusN. simplex

NocardiopsisN. dassonvillei

OceanimonasO. doudoroffii

OchrobactrumO. anthropi

OerskoviaO. enterophila (was Promicromonospora)O. turbata

OligellaO. ureolyticaO. urethralis

OligotrophaO. carboxidovorans

PaenibacillusP. alginolyticusP. alveiP. amylolyticusP. apiariusP. azotofixansP. chitinolyticus (was Bacillus)P. chondroitinusP. curdlanolyticusP. ehimensis (was Bacillus)P. glucanolyticusP. larvaeP. lautusP. lentimorbusP. macerans

Paenibacillus (continued)P. macquariensisP. pabuliP. polymyxaP. popilliaeP. thiaminolyticusP. validus

PantoeaP. agglomeransP. ananatisP. dispersaP. stewartii

Parabacteroides (was Bacterioides)P. distasonisP. merdae

ParacoccusP. denitrificans

ParvimonasP. micros (was Micromonas)

PasteurellaP. aerogenesP. bettyaeP. caballiP. canisP. dagmatisP. langaaensisP. mairiiP. multocidaP. pneumotropicaP. stomatisP. testudinis

PaucimonasP. lemoignei

PectobacteriumP. carotovorumP. cypripedii

PediococcusP. acidilacticiP. damnosusP. dextrinicusP. parvulusP. pentosaceus

Page 36: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

MD16S2 version 2.10

* New in version 2.10

MIDI Inc. © 2008 Page 36 of 60 June 2008

PedobacterP. heparinus

PedomicrobiumP. americanumP. ferrugineum

PelomonasP. saccharophila (was Pseudomonas)

PeptococcusP. niger

PeptoniphilusP. lacrimalis

PeptostreptococcusP. anaerobius

PhotobacteriumP. damselae

PhotorhabdusP. luminescens

PhyllobacteriumP. myrsinacearumP. rubiacearum

PlanobisporaP. longispora

PlanococcusP. citreusP. kocurii

PlanomonosporaP. parontospora

PlesiomonasP. shigelloides

PorphyromonasP. catoniaeP. circumdentaria

PragiaP. fontium

PrauserellaP. rugosa

PrevotellaP. buccaeP. buccalisP. corporisP. denticolaP. disiensP. heparinolyticaP. oralisP. orisP. oulorumP. zoogleoformans

PropionibacteriumP. acnesP. avidumP. jenseniiP. propionicum

ProsthecomicrobiumP. enhydrumP. hirschiiP. pneumaticum

ProteusP. mirabilisP. myxofaciensP. penneriP. vulgaris

ProvidenciaP. alcalifaciensP. heimbachaeP. rettgeriP. rustigianiiP. stuartii

PseudoalteromonasP. atlanticaP. carrageenovoraP. espejianaP. haloplanktisP. luteoviolaceaP. nigrifaciensP. undina

Page 37: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

MD16S2 version 2.10

* New in version 2.10

MIDI Inc. © 2008 Page 37 of 60 June 2008

PseudomonasP. aeruginosaP. agariciP. alcaligenesP. amygdaliP. anguillisepticaP. antimicrobicaP. aspleniiP. aurantiacaP. balearicaP. boreopolisP. carboxydohydrogenaP. cichoriiP. citronellolisP. corrugataP. flavescensP. fluorescensP. fragiP. fulvaP. fuscovaginaeP. lundensisP. marginalisP. mendocinaP. mephiticaP. mucidolensP. nitroreducensP. oleovoransP. oryzihabitans (was Flavimonas)P. pertucinogenaP. pictorumP. pseudoalcaligenesP. putidaP. resinovoransP. savastanoiP. stramineaP. stutzeriP. synxanthaP. syringaeP. taetrolensP. tolaasiiP. veroniiP. viridiflava

PseudorhodobacterP. ferrugineus

PsychrobacterP. immobilisP. phenylpyruvicus

RahnellaR. aquatilis

RalstoniaR. pickettiiR. solanacearumR. syzygii (was Pseudomonas)

RaoultellaR. ornithinolyticaR. planticolaR. terrigena

RathayibacterR. rathayiR. tritici

RhizobiumR. radiobacter (was Agrobacterium)R. rhizogenes (was Agrobacterium)R. rubi

RhodobacterR. capsulatusR. sphaeroides

RhodococcusR. coprophilusR. corynebacterioides (was Nocardia)R. erythropolisR. fasciansR. globerulusR. opacusR. rhodniiR. rhodochrousR. ruberR. wratislaviensisR. zopfii

RhodopseudomonasR. palustris

RoseomonasR. cervicalisR. fauriaeR. genomospecies 4R. genomospecies 5R. genomospecies 6R. gilardii

RothiaR. dentocariosaR. mucilaginosa

Page 38: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

MD16S2 version 2.10

* New in version 2.10

MIDI Inc. © 2008 Page 38 of 60 June 2008

RubrivivaxR. gelatinosus

RuegeriaR. atlantica

RuminococcusR. productus

SaccharothrixS. coeruleofuscaS. mutabilis

SalegentibacterS. salegens

SalimicrobiumS. halophilum (was Bacillus)

SalmonellaS. bongoriS. enterica (includes choleraesuis)S. enteritidisS. typhiS. typhimurium

SelenomonasS. artemidisS. ruminantiumS. sputigena

SerratiaS. entomophilaS. ficariaS. fonticolaS. grimesiiS. marcescensS. odoriferaS. plymuthicaS. proteamaculansS. rubidaea

ShewanellaS. algaeS. hanedaiS. putrefaciens

ShigellaS. boydiiS. dysenteriaeS. flexneriS. sonnei

SkermaniaS. piniformis

SphingobacteriumS. faeciumS. spiritivorumS. thalpophilum

SphingobiumS. chlorophenolicum (was Sphingomonas)S. yanoikuyae (was Sphingomonas)

SphingomonasS. adhaesivaS. capsulataS. echinoidesS. parapaucimobilisS. paucimobilisS. sanguinis

SphingopyxisS. macrogoltabida (was Sphingomonas)S. terrae (was Sphingomonas)

SporolactobacillusS. laevolacticus (was Bacillus)

SporosarcinaS. globisporaS. pasteuriiS. psychrophilaS. ureae

StaphylococcusS. arlettaeS. aureusS. auricularisS. capitisS. capraeS. carnosusS. chromogenesS. cohniiS. delphiniS. epidermidisS. equorumS. felisS. gallinarumS. haemolyticusS. hominisS. hyicusS. intermediusS. kloosii

Page 39: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

MD16S2 version 2.10

* New in version 2.10

MIDI Inc. © 2008 Page 39 of 60 June 2008

Staphylococcus (continued)S. lentusS. lugdunensisS. muscaeS. pasteuriS. piscifermentansS. pulvereriS. saprophyticusS. schleiferiS. sciuriS. simulansS. vitulinusS. warneriS. xylosus

StenotrophomonasS. maltophilia

StreptobacillusS. moniliformis

StreptococcusS. acidominimusS. agalactiaeS. alactolyticusS. anginosusS. bovisS. canisS. cricetiS. cristatusS. downeiS. dysgalactiaeS. equiS. equinusS. ferusS. gordoniiS. hyointestinalisS. iniaeS. intermediusS. macacaeS. mitisS. mutansS. oralisS. parasanguinisS. parauberisS. pleomorphusS. pneumoniaeS. porcinusS. pyogenesS. rattiS. salivariusS. sanguinis (was S. sanguis)S. sobrinus

Streptococcus (continued)S. suisS. thermophilusS. uberisS. vestibularis

StreptomycesS. albusS. antibioticusS. arenaeS. californicusS. cavourensisS. chattanoogensisS. citreofluorescensS. coelicolorS. collinusS. durhamensisS. flaveolusS. fragilisS. gougerotiiS. griseoplanusS. griseosporeusS. griseusS. herbaricolorS. intermediusS. lavendulaeS. limosusS. longisporoflavusS. luridusS. luteogriseusS. luteoverticillatusS. massasporeusS. minutiscleroticusS. misakiensisS. mobaraensisS. murinusS. narbonensisS. nashvillensisS. nitrosporeusS. niveoruberS. olivaceoviridisS. olivoverticillatusS. olivoviridisS. omiyaensisS. orinociS. pactumS. polychromogenesS. rimosusS. roseoverticillatusS. septatusS. somaliensisS. tuirusS. violaceoruber

Page 40: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

MD16S2 version 2.10

* New in version 2.10

MIDI Inc. © 2008 Page 40 of 60 June 2008

StreptosporangiumS. fragileS. nondiastaticumS. vulgare

SuttonellaS. indologenes

TatlockiaT. maceacherniiT. micdadei

TatumellaT. ptyseos

TerrabacterT. tumescens

TerrimonasT. ferruginea (was Flavobacterium)

TetragenococcusT. halophilusT. solitarius (was Enterococcus)

TetrasphaeraT. duodecadis (was Arthrobacter)

TrabulsiellaT. guamensis

TsukamurellaT. inchonensisT. paurometabolaT. pulmonisT. tyrosinosolvens

TuricellaT. otitidis

UreibacillusU. thermosphaericus

VagococcusV. fluvialis

VariovoraxV. paradoxus

VeillonellaV. atypicaV. disparV. parvulaV. rodentium

VibrioV. tubiashii

VirgibacillusV. halodenitrificans (was Bacillus)V. pantothenticus

VogesellaV. indigofera

WeissellaW. confusaW. halotoleransW. kandleriW. minorW. paramesenteroidesW. viridescens

WolinellaW. succinogenes

XanthobacterX. agilisX. autotrophicusX. flavus

XanthomonasX. axonopodisX. campestrisX. fragariaeX. hyacinthiX. translucens

XenorhabdusX. beddingiiX. bovieniiX. nematophilaX. poinarii

Page 41: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

MD16S2 version 2.10

* New in version 2.10

MIDI Inc. © 2008 Page 41 of 60 June 2008

YersiniaY. aldovaeY. bercovieriY. enterocoliticaY. frederikseniiY. intermediaY. kristenseniiY. mollaretiiY. pseudotuberculosisY. rohdei

Y. ruckeri

YokenellaY. regensburgei

ZobelliaZ. uliginosa

Page 42: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

FY28S2 version 2.10

* New in version 2.10

MIDI Inc. © 2008 Page 42 of 60 June 2008

AbortiporusA. biennis

AbsidiaA. californicaA. cylindrosporaA. spinosa

AchaetomiumA. strumarium

AchlyaA. aquaticaA. recurvaA. sparrowii

AcremoniumA. bacillisporumA. breveA. charticolaA. cucurbitacearumA. curvulumA. furcatumA. murorumA. obclavatumA. sclerotigenumA. strictumA. stromaticum

AcrodontiumA. crateriformeA. griseumA. salmoneumA. simplex

AgaricusA. bisporus

AlternariaA. alternataA. brassicaeA. brassicicolaA. cichoriiA. cucumerinaA. dauciA. gaisenA. geophilaA. infectoriaA. lewiaA. longipesA. longissimaA. panaeA. porri

A. solani

AmbrosiozymaA. monospora

AmylostereumA. chailletii

AphanocladiumA. album

AphanomycesA. euteichesA. iridis

AplanesA. androgynes

AplanopsisA. spinosa

ApodachlyaA. brachynema

ApophysomycesA. elegans

ArachniotusA. flavoluteus

ArachnothecaA. albicans

ArmillariaA. bulbosa

ArthriniumA. phaeospermum

ArthrobotrysA. dactyloidesA. oligosporaA. superba

ArthrographisA. cuboidea

ArxiozymaA. telluris

ArxulaA. adeninivorans

Page 43: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

FY28S2 version 2.10

* New in version 2.10

MIDI Inc. © 2008 Page 43 of 60 June 2008

AscochytaA. avenaeA. chartarumA. desmazieriA. fabaeA. gramineaA. hordeiA. pisiA. sorghi

AscosphaeraA. apisA. atraA. larvisA. majorA. pollenicolaA. proliperdaA. variegata

AspergillusA. aculeatusA. asperescensA. aureolatusA. awamoriA. brevipesA. caesiellusA. candidusA. carbonariusA. carneusA. chevalieriA. deflectusA. egyptiacusA. flavusA. foetidusA. fumigatusA. funiculosusA. japonicusA. kanagawaensisA. nigerA. ochraceusA. oryzaeA. parvulusA. penicilloidesA. petrakiiA. restrictusA. sclerotiorumA. sepultusA. terricolaA. versicolor

AtheliaA. rolfsii

AureobasidiumA. pullulans

BeauveriaB. bassianaB. felinaB. tenella

BensingtoniaB. intermedia

BipolarisB. brizaeB. indicaB. iridisB. leersiaeB. micropusB. paniciB. portulaceaeB. urochloaeB. zeicola

BlumeriellaB. jaapii

BotryosphaeriaB. berengerianaB. quercuumB. rhodinaB. ribisB. stevensiiB. tsugae

BotryosporiumB. longibrachiatum

BotryotiniaB. draytoniiB. narcissicolaB. porri

BotryozymaB. nematodophila

BotrytisB. cinereaB. hyacinthiB. tulipae

Page 44: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

FY28S2 version 2.10

* New in version 2.10

MIDI Inc. © 2008 Page 44 of 60 June 2008

BrettanomycesB. nanus

BrevilegniaB. macrospora

BulleraB. croceaB. dendrophilaB. piricola

ByssochlamysB. fulvaB. nivea

CalyptralegniaC. achlyoides

CandidaC. aaseriC. agrestisC. albicansC. anatomiaeC. antarcticaC. apicolaC. apisC. atlanticaC. atmosphericaC. auringiensisC. bertaeC. berthetiiC. blankiiC. boidiniiC. boleticolaC. bombiC. bombicolaC. butyriC. cantarelliiC. cariosilignicolaC. caseinolyticaC. castrensisC. catenulataC. chilensisC. chiropterorumC. coipomensisC. diddensiaeC. diversaC. edaxC. entomophilaC. ergatensisC. etchellsii

Candida (continued)C. ethanolicaC. fennicaC. fluviotilisC. fragariorumC. fragicola

* C. freyschussiiC. friedrichiiC. fructusC. galactaC. geocharesC. glabrataC. glaebosaC. gropengiesseriC. haemuloniiC. halophilaC. holmiiC. humilisC. inconspicuaC. insectalensC. insectamansC. intermediaC. krissiiC. llanquihuensisC. lodderaeC. lusitaniaeC. magnoliaeC. maltosaC. marinaC. marisC. maritimaC. melibiosicaC. meliniiC. membranifaciensC. mesentericaC. methanosorbosaC. methylicaC. mogiiC. montanaC. multigemmisC. musaeC. naeodendraC. nemodendraC. nitrativoransC. nitratophilaC. norvegensisC. norvegicaC. oleophilaC. oregonensisC. osornensisC. paludigenaC. parapsilosisC. pararugosa

Page 45: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

FY28S2 version 2.10

* New in version 2.10

MIDI Inc. © 2008 Page 45 of 60 June 2008

Candida (continued)C. peltataC. pignaliaeC. piniC. populiC. pseudointermediaC. quercitrasaC. quercuumC. railenensisC. rhagiiC. rugopelliculosaC. rugosaC. saitoanaC. sakeC. salmanticensisC. savonicaC. shehataeC. silvaeC. silvicultrixC. solaniC. sonorensisC. sophiaeC. sorbophilaC. sorboxylosaC. spandovensisC. stellataC. tenuisC. tropicalis

* C. utilisC. valdivianaC. vanderwaltiiC. vartiovaaraiC. versatilisC. viniC. wickerhamiiC. xestobiiC. zeylanoides

CeratobasidiumC. cornigerum

CeratocystisC. adiposaC. fagacearumC. fimbriata

CercosporaC. apiiC. beticolaC. carotaeC. kikuchiiC. nicotianaeC. zonata

CerinosterusC. cyanescens

ChaetomiumC. atrobrunneumC. aureumC. brasilienseC. funicolaC. globosum

ChaetosphaeronemaC. larense

ChrysosporiumC. keratinophiluC. merdariumC. pannicolaC. queenslandicumC. tropicum

CiboriniaC. camelliae

CircinellaC. rigida

CiteromycesC. matritensis

CladobotryumC. varium

CladosporiumC. cladosporioidesC. fulvumC. herbarumC. macrocarpumC. sphaerospermum

ClavicepsC. purpurea

ClavisporaC. opuntiae

ClonostachysC. compactiusculaC. rosea (was Gliocladium)

Page 46: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

FY28S2 version 2.10

* New in version 2.10

MIDI Inc. © 2008 Page 46 of 60 June 2008

CochliobolusC. australiensisC. bicolorC. carbonumC. chloridisC. cynodontisC. ellisiiC. geniculatusC. hawaiiensisC. heterostrophusC. homomorphusC. miyabeanusC. sativusC. spiciferC. stenospilusC. victoriae

CokeromycesC. recurvatus

ColletotrichumC. acutatumC. brassicaeC. capsiciC. caricaeC. circinansC. coccodesC. coffeanumC. crassipesC. curvatumC. dematiumC. destructivumC. gloeosporiodesC. godetiaeC. graminicolaC. lindemuthianumC. nymphaeaeC. phaseolorumC. trichellumC. trifoliiC. truncatum

ConidiobolusC. incongruus

ConiellaC. diplodiella

ConiothyriumC. cerealisC. fuckeliiC. juniperiC. olivaceum

CoprinusC. cinereus

CrinipellisC. perniciosaC. stipitarius

CrumenulopsisC. sororia

CryphonectriaC. parasitica

CryptococcusC. aeriusC. albidusC. aterC. curvatusC. dimennaeC. flavusC. heveanensisC. hungaricusC. laurentiiC. maceransC. terreusC. tsukubaensis

CryptodiaportheC. populea

CurvulariaC. clavataC. lunataC. verruculosa

CylindrocarponC. cylindroideC. cylindroidesC. destructansC. lucidumC. olidum

CylindrocladiumC. quinqueseptatum

CystofilobasidiumC. bisporidiiC. capitatum

Page 47: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

FY28S2 version 2.10

* New in version 2.10

MIDI Inc. © 2008 Page 47 of 60 June 2008

DebaryomycesD. hanseniiD. polymorphusD. pseudopolymophusD. udeniiD. vanrijiae

DekkeraD. anomalaD. custersianaD. intermediaD. naardenensis

DendrostilbellaD. mycophila

DiaportheD. eresD. helianthiD. phaseolorum

DiaporthopsisD. angelicae

DichostereumD. pallescens

DichotomomycesD. cejpii

DictyuchusD. monosporus

DidymellaD. bryoniaeD. ligulicolaD. lycopersici

DidymostilbeD. matsushimaeD. sundara

DiplocarponD. rosae

DiplodiaD. zeae

DisculaD. destructiva

DoratomycesD. microsporusD. stemonitis

DrechsleraD. catenariaD. dematioideaD. erythrospilaD. phleiD. poaeD. tritici

DrepanopezizaD. populiD. populorumD. salicis

ElsinoeE. fawcettii

EmbellisiaE. chlamydosporaE. hyacinthi

EmericellaE. fruticulosaE. nidulansE. parvatheciaE. quadrilineataE. striataE. unguisE. variecolorE. violacea

EmericellopsisE. minimaE. synnematicola

EndomycesE. fibuliger

EngyodontiumE. album

EpichloeE. clarkiiE. typhina

EpicoccumE. nigrumE. purpurascens

Page 48: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

FY28S2 version 2.10

* New in version 2.10

MIDI Inc. © 2008 Page 48 of 60 June 2008

EremascusE. albusE. fertilis

ErythrobasidiumE. hasegawianu

EupenicilliumE. baarnenseE. brefeldianumE. cinnamopurpureumE. crustaceumE. euglaucumE. javanicumE. lapidosumE. ochrosalmoneumE. pinetorumE. terrenum

EurotiumE. amstelodamiE. chevalieriE. echinulatumE. herbariorumE. rubrumE. spiculosum

EutypaE. lata

EutypellaE. parasitica

ExophialaE. jeanselmei

ExserohilumE. pedicellatum

FellomycesF. penicillatusF. polyborus

FennelliaF. flavipesF. nivea

FennellomycesF. linderi

FilobasidiellaF. neoformans

FilobasidiumF. capsuligenumF. uniguttulatum

FistulinaF. hepatica

FomitopsisF. pinicola

FusariumF. acuminatumF. anthophilumF. aquaeductuumF. avenaceumF. cerealisF. chlamydosporumF. culmorumF. dimerumF. eumartiiF. flocciferumF. graminearumF. heterosporumF. incarnatumF. lunulosporumF. napiformeF. nygamaiF. oxysporumF. poaeF. proliferatumF. robustumF. sacchariF. sambucinumF. solaniF. subglutinansF. tricinctumF. ventricosumF. verticillioidesF. xylarioides

GaeumannomycesG. cylindrosporusG. graminis

GanodermaG. applanatumG. lucidumG. resinaceum

Page 49: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

FY28S2 version 2.10

* New in version 2.10

MIDI Inc. © 2008 Page 49 of 60 June 2008

GeomycesG. asperulatusG. pannorum

GeosmithiaG. argillaceaG. lavendulaG. namyslowskiiG. putterillii

GeotrichumG. candidum

* G. capitatumG. citriG. fragrans

* G. klebahnii

GilbertellaG. persicaria

GliocladiumG. polyporicolaG. virensG. viride

GloeodesG. pomigena

GloeophyllumG. trabeum

GnomoniaG. comariG. errabunda

GraphiumG. penicillioidesG. putredinus

GreeneriaG. uvicola

GremmeniellaG. abietina

GrovesiellaG. abieticola

GuignardiaG. citricarpaG. vaccinii

GuilliermondellaG. selenospora

GymnascellaG. dankaliensis

GymnoascusG. petalosporusG. reesii

HalophytophthoraH. avicenniaeH. kandeliiH. masteriH. polymorphicaH. tartarea

HamigeraH. striata

HanseniasporaH. guilliermondiiH. occidentalisH. osmophilaH. valbyensis

HericiumH. erinaceus

HistoplasmaH. capsulatum

HymenoscyphusH. ericae

HyphopichiaH. burtonii

HypocreaH. aurantiaH. aureovirideH. jecorinaH. nigricansH. pallidaH. schweinitzii

HypomycesH. subiculosus

Page 50: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

FY28S2 version 2.10

* New in version 2.10

MIDI Inc. © 2008 Page 50 of 60 June 2008

HypoxylonH. mammatumH. serpens

InonotusI. weirii

IssatchenkiaI. orientalisI. scutulata

KabatiellaK. lini

KabatinaK. juniperiK. thujae

KloeckeraK. apiculata

KloeckerasporaK. vineae

KluyveromycesK. aestuariiK. africanusK. blattaeK. delphensisK. dobzhanskiiK. lactisK. lodderiiK. marxianusK. phaffiiK. polysporusK. thermotoleransK. waltiiK. wickerhamii

LachnellulaL. occidentalisL. willkommii

LactariusL. deliciosus

LaetisariaL. fuciformis

LagenidiumL. caudatum

LauriliaL. taxodii

LecythophoraL. hoffmanniiL. mutablis

LentinulaL. edodes

LeptodontidiumL. boreale

LeptographiumL. lundbergiiL. wagneri

LeptolegniaL. caudata

LeptosphaeriaL. maculans

LeptosphaerulinaL. australis

LeucosporidiumL. scottii

LipomycesL. kononenkoaeL. starkeyiL. tetrasporus

LodderomycesL. elongisporus

LophodermiumL. pinastri

MadurellaM. grisea

MagnaportheM. salvinii

MalbrancheaM. pulchella

Page 51: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

FY28S2 version 2.10

* New in version 2.10

MIDI Inc. © 2008 Page 51 of 60 June 2008

MalesseziaM. pachydematis

MarasmiusM. oreades

MariannaeaM. elegans

MarielliottiaM. triseptata

MastigomycesM. philippovii

MeriaM. laricis

MeruliusM. tremellosus

MetarhiziumM. flavoviride

MetschnikowiaM. bicuspidataM. pulcherrimaM. reukaufiiM. zobellii

MicroascusM. manginii

MicrodochiumM. nivaleM. oryzae

MonacrosporiumM. thaumasium

MoniliellaM. acetoabutensM. suaveolens

MoniliniaM. fructicolaM. laxa

MonilochaetesM. infuscans

MortierellaM. polycephala

MrakiaM. frigida

MucorM. circinelloidesM. flavusM. hiemalisM. indicusM. mucedoM. plumbeusM. racemosusM. ramosissimusM. saturninus

MyceliophthoraM. luteaM. thermophila

MycogoneM. perniciosa

MycosphaerellaM. allicinaM. aroniciM. berberidisM. brassicicolaM. cannabisM. fragariaeM. graminicolaM. grossulariaeM. harthensisM. laricinaM. latebrosaM. linicolaM. marksiiM. milleriM. parkiiM. pinodesM. populicolaM. punctiformisM. pyriM. rabieiM. rubiM. stellarinearumM. tassianaM. ulmiM. vaccinii

Page 52: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

FY28S2 version 2.10

* New in version 2.10

MIDI Inc. © 2008 Page 52 of 60 June 2008

MyrotheciumM. cinctumM. gramineumM. inundatumM. roridumM. verrucaria

MyxozymaM. kluyveriM. melibiosiM. mucilagina

NadsoniaN. fulvescens

NectriaN. cinnabarinaN. flavolanataN. gracilipesN. inventaN. macrostomaN. mauritiicolaN. radicicola

NeofabraeaN. albaN. malicorticis

NeosartoryaN. fischeriN. pseudofischeri

NeotesudinaN. rosatii

NigrosporaN. oryzaeN. sphaerica

OedocephalumO. glomerulosum

OgataeaO. wickerhamii

OidiodendronO. griseumO. tenuissimum

OosporidiumO. margaritiferum

OphiostomaO. dryocoetidisO. floccosumO. minusO. narcissiO. novoO. olivaceumO. piceaeO. piliferumO. quercusO. sagmatosporaO. ulmi

OudemansiellaO. mucida

OvadendronO. sulphureo_ochraceum

OvuliniaO. azaleae

PachymetraP. chaunorhiza

PachysolenP. tannophilus

PaecilomycesP. carneusP. farinosusP. javanicusP. lilacinusP. marquandiiP. puntoniiP. variotiiP. viridis

PenicilliumP. aethiopicumP. alliiP. argillaceumP. atramentosumP. aurantiogriseumP. aurantiovirensP. bilaiaeP. brevicompactumP. camembertiiP. capsulatumP. chermesinumP. chrysogenumP. citreonigrum

Page 53: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

FY28S2 version 2.10

* New in version 2.10

MIDI Inc. © 2008 Page 53 of 60 June 2008

Penicillium (continued)P. citrinumP. claviformeP. clavigerumP. communeP. corylophilumP. crustosumP. cyclopiumP. decumbensP. dierckxiiP. digitatumP. discolorP. duclauxiiP. expansumP. funiculosumP. glabrumP. hordeiP. implicatumP. italicumP. lanosumP. madritiP. melanoconidiumP. meliniiP. minioluteumP. nalgiovenseP. neoechinulatumP. oblatumP. ochrochloronP. olsoniiP. oxalicumP. paxilliP. pinophilumP. polonicumP. primulinumP. raistrickiiP. restrictumP. roquefortiP. rubrumP. rugulosumP. simplicissimumP. solitumP. spinulosumP. thomiiP. tricolorP. variabileP. verrucosumP. viridicatumP. vulpinum

PeniophoraP. sacrata

PeronophythoraP. litchii

PestalotiaP. rhododendri

PestalotiopsisP. maculansP. palmarumP. versicolor

PetriellaP. boulangeriP. setiferaP. sordida

PetromycesP. alliaceus

PeziculaP. cinnamomeaP. corticolaP. ocellata

PhacidiumP. coniferarum

PhaeoacremoniumP. aleophilumP. chlamydosporumP. parasiticum

PhaeoannellomycesP. elegans

PhaeococcomycesP. exophilae

PhaeoisariopsisP. griseola

PhaeosphaeriaP. avenariaP. nodorum

PhanerochaeteP. chyrsosporiumP. salmonicolor

Page 54: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

FY28S2 version 2.10

* New in version 2.10

MIDI Inc. © 2008 Page 54 of 60 June 2008

PhellinusP. robiniaeP. weirianus

PhialemoniumP. curvatumP. obovatum

PhialocephalaP. fortinii

PhialophoraP. americanaP. cinerescensP. fastigiataP. malorum

PhialophorophomaP. litoralis

PholiotaP. squarrosa

PhomaP. andinaP. betaeP. chrysanthemicolaP. exiguaP. foveataP. glomerataP. herbarumP. incomptaP. leveilleiP. macrostomaP. medicaginisP. multirostrataP. pomorumP. septicidalisP. sorghinaP. terrestrisP. terricola

PhomopsisP. phoenicicolaP. sclerotioidesP. viticola

PhyllostictaP. maydisP. solitaria

PhytophthoraP. aquaticaP. arecaeP. batemanensisP. boehmeriaeP. botryosaP. cactorumP. cambivoraP. capsiciP. cinnamomiP. citricolaP. citrophthoraP. clandestinaP. colocasiaeP. cryptogeaP. drechsleriP. erythrosepticaP. fragariaeP. gonapodyidesP. heveaeP. hibernalisP. humicolaP. idaeiP. ilicisP. infestansP. iranicaP. katsuraeP. lateralisP. meadiiP. megakaryaP. megaspermaP. melonisP. mirabilisP. nicotianaeP. palmivoraP. phaseoliP. piniP. porriP. primulaeP. pseudotsugaeP. quininaeP. richardiaeP. sinensisP. spinosaP. syringaeP. tentaculataP. tropicalisP. vignae

Page 55: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

FY28S2 version 2.10

* New in version 2.10

MIDI Inc. © 2008 Page 55 of 60 June 2008

PichiaP. alniP. angustaP. anomalaP. barkeriP. bimundalisP. cactophilaP. capsulataP. carsoniiP. delftensisP. deserticolaP. etchellsiiP. fabianii

* P. farinosaP. fermentansP. fluxuumP. haplophilaP. heediiP. henriciiP. holstiiP. jadiniiP. membranifaciensP. methanolicaP. mexicanaP. minutaP. mississippiensisP. ohmeriP. pastorisP. petersoniiP. philodendriP. piniP. pseudocactophilaP. quercuumP. salicariaP. scolytiP. strasburgensisP. subpelliculosaP. sydowiorumP. thermotoleransP. toletanaP. trehalophilaP. triangularis

PiptoporusP. betulinus

PithomycesP. atro_olivaceusP. sacchari

PityrosporumP. ovale

PlectospiraP. myriandra

PleosporaP. herbarumP. papaveracea

PleurotusP. ostreatus

PolycephalomycesP. ramosusP. tomentosus

ProtoachlyaP. paradoxa

PseudallescheriaP. angustaP. ellipsoidea

PseudocercosporellaP. anguioiP. herpotr

PseudocochliobolusP. pallescens

PseudogymnoascusP. roseus

PseudopeziculaP. tracheiphila

PyrenochaetaP. lycopersici

PyrenophoraP. avenaeP. bromiP. chaetomioidesP. dactylidesP. dictyoidesP. gramineaP. japonicaP. lolliP. semeniperdaP. teresP. tetrarrhenae

Page 56: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

FY28S2 version 2.10

* New in version 2.10

MIDI Inc. © 2008 Page 56 of 60 June 2008

PyriculariaP. oryzae

Pyronema* P. domesticum

PythiumP. acanthicumP. acanthophoronP. acrogynumP. adhaerensP. amasculinumP. anandrumP. angustatumP. aphanidermatumP. apleroticumP. aquatileP. aristosporumP. arrhenomanesP. borealeP. capillosumP. catenulatumP. chamaehyphonP. chondricolaP. coloratumP. conidiophorumP. cucurbitacearumP. cylindrosporumP. debaryanumP. delienseP. diclinumP. dimorphumP. dissimileP. dissotocumP. echinulatumP. erinaceumP. flevoenseP. folliculosumP. graminicolaP. helicandrumP. helicoidesP. heterothallicumP. hydnosporumP. hypogynumP. indigoferaeP. inflatumP. insidiosumP. intermediumP. irregulareP. iwayamaiP. jasmoniumP. kunmingense

Pythium (continued)P. macrosporumP. mamillatumP. marsipiumP. mastophorumP. middletoniiP. minusP. monospermumP. multisporumP. myriotylumP. nunnP. oedochilumP. okanoganenseP. oligandrumP. orthogononP. ostracodesP. pachycauleP. paddicumP. paroecandrumP. parvumP. periilumP. periplocumP. perplexumP. pleroticumP. plurisporiumP. porphyraeP. prolatumP. pyrilobumP. radiosumP. rostratumP. salpingophorumP. scleroteichumP. spinosumP. splendensP. sulcatumP. sylvaticumP. torulosumP. tracheiphilumP. ultimumP. uncinulatumP. undulatumP. vanterpooliiP. vexansP. violaeP. volutumP. zingiberis

RamulariaR. vallisumbrosae

RhinocladiellaR. aquaspersaR. atrovirens

Page 57: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

FY28S2 version 2.10

* New in version 2.10

MIDI Inc. © 2008 Page 57 of 60 June 2008

RhizoctoniaR. crocorumR. solani

RhizomucorR. mieheiR. variabilis

RhizopusR. microsporusR. oryzaeR. sexualisR. stolonifer

RhodosporidiumR. diobovatumR. fluvialeR. paludigenumR. sphaerocarpumR. toruloides

RhodotorulaR. acheniorumR. acutaR. bacarumR. bogoriensisR. ferulica

* R. glutinisR. graminisR. lactosaR. minutaR. mucilaginosaR. philylaR. pustula

SaccharomycesS. bayanusS. cerevisiaeS. dairenensisS. exiguusS. kluyveriS. pastorianusS. unisporus

SaccharomycodesS. ludwigii

SaccharomycopsisS. capsularisS. javanensisS. malangaS. vini

SaprolegniaS. feraxS. parasiticaS. polymorphaS. unispora

SaturnisporaS. disporaS. saitoi

SchizoblastosporionS. starkeyi

SchizophyllumS. commune

SchizosaccharomycesS. japonicusS. pombe

SchwanniomycesS. occidentalis

ScirrhiaS. acicola

SclerotiniaS. sclerotiorum

SclerotiumS. cepivorumS. delphinii

ScopulariopsisS. asperulaS. chartarumS. flavaS. fuscaS. koningiiS. sphaerospora

ScytalidiumS. hyalinumS. lignicola

Page 58: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

FY28S2 version 2.10

* New in version 2.10

MIDI Inc. © 2008 Page 58 of 60 June 2008

SeptoriaS. aciculosaS. anthuriiS. apiicolaS. avenaeS. azaleaeS. calandulaeS. chameacistiS. chrysanthemellaS. citriS. citricolaS. cyclaminisS. gerberaeS. glycinesS. lactucaeS. limonumS. obesaS. pistaciaeS. sociaS. tritici

SesquicilliumS. candelabrum

SetosphaeriaS. monocerasS. pedicellataS. rostrata

SistotremaS. brinkmanniiS. raduloides

SphaeropsisS. sapinea

SphaerostilbellaS. novaezelandiae

SporidiobolusS. johnsoniiS. ruineniae

SporobolomycesS. singularisS. tsugae

SporopachydermiaS. cereanaS. lactativora

SporotrichumS. aurantiacum

StachybotrysS. chartarumS. cylindrospora

StemphyliumS. sarcinaeformeS. vesicarium

StephanoascusS. ciferrii

StereumS. gausapatumS. hirsutum

SterigmatomycesS. elviae

StilbellaS. aciculosaS. albocitrinaS. annulataS. bucidaeS. byssisedaS. fimetariaS. fuscaS. jaapii

StromatiniaS. narcissi

SydowiaS. polyspora

SyncephalastrumS. racemosum

TalaromycesT. avellaneusT. bacillisporusT. emersoniiT. flavusT. helicusT. intermediusT. macrosporusT. wortmannii

Page 59: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

FY28S2 version 2.10

* New in version 2.10

MIDI Inc. © 2008 Page 59 of 60 June 2008

TaphrinaT. cerasi

ThamnidiumT. elegans

ThielaviaT. basicola

ThraustothecaT. clavata

TilletiaT. laevis

TorulaT. herbarum

TorulasporaT. delbrueckiiT. pretoriensis

TrichaptumT. abietinum

TrichodermaT. atrovirideT. aureovirideT. citrinovirideT. fasiculatumT. fertileT. harzianumT. inhamatumT. koningiiT. longibrachiatumT. minutsporumT. paceramosumT. polysporumT. pseudokoningiiT. reeseiT. saturnisporumT. viride

TrichosporonT. aquatileT. faecaleT. inkinT. jiroveciiT. loubieri

* T. mucoidesT. pullulans

TrichotheciumT. roseum

TrichurusT. spiralis

TrigonopsisT. variabilis

TritirachiumT. oryzae

UdeniomycesU. puniceus

UlocladiumU. atrumU. botrytisU. chartarumU. consortiale

UstilagoU. avenaeU. maydis

ValsaV. cypriV. nivea

VenturiaV. inaequalisV. nashicolaV. pyrina

VerticilliumV. biguttatumV. coccosporumV. dahliaeV. epiphytumV. lanosoniveumV. lecaniiV. psalliotae

VolutellaV. ciliata

VuilleminiaV. comedens

WallemiaW. sebi

Page 60: DNA Library Lists – June 2008 - MIDI, Incmidi-inc.com/pdf/Sherlock_DNA_Libraries_2.1.pdf · DNA Library Lists – June 2008 ... A. haloalkaliphilus (was Bacillus) Alloiococcus A

FY28S2 version 2.10

* New in version 2.10

MIDI Inc. © 2008 Page 60 of 60 June 2008

WaltomycesW. lipofer

WickerhamiaW. fluorescens

WickerhamiellaW. domercqiae

WilliopsisW. californicaW. saturnus

WingeaW. robertsii

XanthophyllomycesX. dendrorhous

YamadazymaY. guilliermondii

YarrowiaY. lipolytica

ZopfiellaZ. pleuropora

ZygoascusZ. hellenicus

ZygorhynchusZ. moelleri

ZygosaccharomycesZ. bailiiZ. bisporusZ. cidriZ. fermentatiZ. florentinusZ. microellipsoidesZ. mrakiiZ. rouxii

ZygosporiumZ. echinosporum

ZygozymaZ. arxiiZ. oligophagaZ. suomiensis