design team 8: fluorescent detection using optical fibers with cardiac myocytes
DESCRIPTION
Design Team 8: Fluorescent Detection using Optical Fibers with Cardiac Myocytes. Team Members: Paul Clark Martin Garcia Chris Gorga John Ling III Giordano Lo Regio Advisors/Assistants: Dr. Franz Baudenbacher Raghav Venkat Tobias Meyer. Introduction. - PowerPoint PPT PresentationTRANSCRIPT
![Page 1: Design Team 8: Fluorescent Detection using Optical Fibers with Cardiac Myocytes](https://reader036.vdocuments.us/reader036/viewer/2022070502/56814d70550346895dbac085/html5/thumbnails/1.jpg)
Design Team 8:Design Team 8:Fluorescent Detection using Optical Fibers Fluorescent Detection using Optical Fibers with Cardiac Myocyteswith Cardiac Myocytes
Team Members:Team Members:Paul ClarkPaul ClarkMartin GarciaMartin GarciaChris GorgaChris GorgaJohn Ling IIIJohn Ling IIIGiordano Lo RegioGiordano Lo Regio
Advisors/Assistants:Advisors/Assistants:Dr. Franz BaudenbacherDr. Franz BaudenbacherRaghav VenkatRaghav VenkatTobias MeyerTobias Meyer
![Page 2: Design Team 8: Fluorescent Detection using Optical Fibers with Cardiac Myocytes](https://reader036.vdocuments.us/reader036/viewer/2022070502/56814d70550346895dbac085/html5/thumbnails/2.jpg)
IntroductionAt the end of the last progress report our
goals were too:Get clean room certifiedBegin casting optical fibers in PDMS devicePrepare flourescein concentrations and
begin data acquisitionAdapt Device to incorporate cells
![Page 3: Design Team 8: Fluorescent Detection using Optical Fibers with Cardiac Myocytes](https://reader036.vdocuments.us/reader036/viewer/2022070502/56814d70550346895dbac085/html5/thumbnails/3.jpg)
Current StatusEveryone in group is now clean room
certifiedWe have started building our setup to be
used for device testingStock solutions of flourescene are made up
and ready for the initial tests
![Page 4: Design Team 8: Fluorescent Detection using Optical Fibers with Cardiac Myocytes](https://reader036.vdocuments.us/reader036/viewer/2022070502/56814d70550346895dbac085/html5/thumbnails/4.jpg)
Work Completed Initial LabView program has been written
It will be continually updated as needed throughout project
Optical box has been acquired, but it is not in full working order
4 different protocols have been written Creating a master, Integrating Optical
Fiber, Preparing Stock Solutions, Testing Fura-2 Excitation Levels
![Page 5: Design Team 8: Fluorescent Detection using Optical Fibers with Cardiac Myocytes](https://reader036.vdocuments.us/reader036/viewer/2022070502/56814d70550346895dbac085/html5/thumbnails/5.jpg)
Development of a 3-Channel Master on Silicon Wafer
Apply Su-8 to silicon wafer w/ spinner 500 rpm at 100 rpm/s & 1600 rpm at 300
rpm/s Soft bake w/ hot plate (65ºC & 95ºC) Expose w/ UV light around 365 nm Post Exposure Bake (65ºC & 95ºC) Develop by immersing in ethyl acetate Rinse w/ isopropyl alcohol & dry w/ O2 Remove substrate using 70ºC bath of
Remover PG
![Page 6: Design Team 8: Fluorescent Detection using Optical Fibers with Cardiac Myocytes](https://reader036.vdocuments.us/reader036/viewer/2022070502/56814d70550346895dbac085/html5/thumbnails/6.jpg)
Production of PDMS Device w/ Optical Fiber
Mix curing agent and base in 1:15 ratioPour PDMS giving thickness of 200mCure w/ oven at 65ºC for 20 min.Insert fiber optic cable on top of channels
using a micromanipulator3 channels 3 micromanipulators
Replace PDMS in 65ºC oven for 40 min.Plasma bond PDMS to a glass slide
![Page 7: Design Team 8: Fluorescent Detection using Optical Fibers with Cardiac Myocytes](https://reader036.vdocuments.us/reader036/viewer/2022070502/56814d70550346895dbac085/html5/thumbnails/7.jpg)
Diagram of 3-Channel PDMS Device w/ 3 Optical Fibers
![Page 8: Design Team 8: Fluorescent Detection using Optical Fibers with Cardiac Myocytes](https://reader036.vdocuments.us/reader036/viewer/2022070502/56814d70550346895dbac085/html5/thumbnails/8.jpg)
Preparation of a Calcium Stock Solution
Measure 1g CaCO3 w/ an analytical balanc
Add CaCO3 to 700mL DI water while stirring Add 1 mL 12M HCl to aid
dissolving Titrate solution to pH of 7.5 by adding
3M NaOH Add DI water to bring total volume to 1L
![Page 9: Design Team 8: Fluorescent Detection using Optical Fibers with Cardiac Myocytes](https://reader036.vdocuments.us/reader036/viewer/2022070502/56814d70550346895dbac085/html5/thumbnails/9.jpg)
Testing Base Fura-2 Excitation Levels
Place inlet and outlet holes on PDMS device
Mount the device on inverted microscope Connect optical fiber to computer Begin pumping Fura-2 solution through
device Begin fluorescence data acquisition Allow mixing of Ca2+ w/ Fura-2 solution
![Page 10: Design Team 8: Fluorescent Detection using Optical Fibers with Cardiac Myocytes](https://reader036.vdocuments.us/reader036/viewer/2022070502/56814d70550346895dbac085/html5/thumbnails/10.jpg)
Configuration of Optical Components for Fluorescent Measurement
Sipido & Callewaert (1995), Cardiovascular Research [Modified (2007)]
![Page 11: Design Team 8: Fluorescent Detection using Optical Fibers with Cardiac Myocytes](https://reader036.vdocuments.us/reader036/viewer/2022070502/56814d70550346895dbac085/html5/thumbnails/11.jpg)
Magnified Cell Chamber Displaying Fura-2 and Ca2+ Pumps
**Magnified Cell Chamber from Previous Slide
![Page 12: Design Team 8: Fluorescent Detection using Optical Fibers with Cardiac Myocytes](https://reader036.vdocuments.us/reader036/viewer/2022070502/56814d70550346895dbac085/html5/thumbnails/12.jpg)
Goals RevisitedGet clean room certifiedBegin casting optical fibers in PDMS
devicePrepare flourescene concentrations and
begin data acquisitionAdapt Device to incorporate cells
![Page 13: Design Team 8: Fluorescent Detection using Optical Fibers with Cardiac Myocytes](https://reader036.vdocuments.us/reader036/viewer/2022070502/56814d70550346895dbac085/html5/thumbnails/13.jpg)
Timeline for Future Work Wednesday Feb. 14
Meet with Prof. Baudenbacher to obtain necessary materials
Create master and complete our setup in the lab
Monday Feb. 19 - Monday Feb. 26 Cast optical fibers in PDMS device
Wednesday Feb. 28 Begin collecting data with flourescene,
LabView, and PDMS device Start date of this task depends on length of time
required to complete previous task
![Page 14: Design Team 8: Fluorescent Detection using Optical Fibers with Cardiac Myocytes](https://reader036.vdocuments.us/reader036/viewer/2022070502/56814d70550346895dbac085/html5/thumbnails/14.jpg)
ReferencesSipido, Karin R., Callewaert, Geert (1995). How to measure
intracellular [Ca2+] in single cardiac cells with fura-2 or indo-1. Cardiovascular Research, 29, 717-726.
Negative Tone Photoresist Formulations 2002-2025. Micro Chem Website, www.microchem.com.
Min-Hsien Wu, Haoyuan Cai, Xia Xu, Jill P.G. Urban, Zhan-Feng Cui, and Zheng Cui. A SU-8/PDMS Hybrid Microfluidic Device with Integrated Optical Fibers for Online Monitoring of Lactate. Biomedical Microdevices 7:4, 323 ミ 329, 2005.
Fura-2 and Indo-1 Ratiometric Calcium Indicators. Molecular Probes, Invitrogen Detection Technologies. June 21, 2005.