department of biotechnology - dr. harisingh gour …...role and clinical significance of lymphocyte...
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Department of
BiotechnologyAbout Us: The Department of Biotechnology was established in 2001 under Faculty of
Science and is currently under School of Biological Sciences. The MSc and PhD
programs of the department prepare quality human resource for research in academic
and industrial setting. The department provides comprehensive and quality educational
and research avenues to the students through its programs. The department’s current
research areas include plant biotechnology with focus on development of transgenic
plants and disease biology with emphasis on cancer biology and ion channel
physiology.
Mission: The Department of Biotechnology is committed for providing research and
educational programs of international standards to the students. We seek to provide rich
educational experience to the students that includes rigorous theoretical courses and
practicals to understand the concepts of biology. In addition, our department constantly
updates students with recent technological and technical advances in the field of
biotechnology. The ultimate objective of our department is to train students to use
biological concepts and develop innovative technologies for the benefit of mankind.
Vision: The department envisions to develop a robust interdisciplinary research
environment while maintaining personalized research environment to perform research
of national and international prominence. One of the major focus of the department will
be to effectively integrate the educational and research programs to deliver maximum
output in terms of student training and career development. The department foresees to
expand the research focus to areas including cancer biology, cell biology, DNA
replication and repair, stem cell research, gene expression, molecular medicine and
plant molecular biology. The goal of the department is to develop next generation young
scientists who will make break through discoveries and provide cost effective solutions
to various for human problems through creative and innovative research.
Research Laboratory Smart Classroom Plant Tissue Culture
Facu
ltyProf Subodh K. Jain
Head, Dept. of BiotechnologyProfessor, Dept. of Zoology PhD, BiochemistryEmail: [email protected]
Research interests: Molecular biology and stress physiology
Selected Publications
Bharat Neekhra, Divya Pandey, Meeta Mishra, Subodh Kumar Jain Molecular Marker
Approach In Honey Bee: A Review. Int J Pharm Bio Sci 2012 July; 3(3): (B) 261 – 271
(Impact Factor 0.47)
Jain, Subodh Kumar and Zelena Dora: Gender specific influence of endogenous glutamate
release on stress-induced fear in rats. (Accepted for publication on 5.11.2010 in Endocrine
Regulation, Bratislava, Slovak Vol. 45, 13-21 2011 ISSN: 0344-0338, Impact factor: 1.08)
Role and clinical significance of lymphocyte mitochondrial dysfunction in type 2 diabetes
mellitus. Translational Research (2011) vol.158 No.6, 344-359 (Impact Factor 2.763)
Mishra, P.K.; Raghuram, GV; Bhargava, A; Ahirwar, A; Samarth, R; Upadhyaya, R; Jain,
Subodh Kumar; Pathak, Neelam: In vitro and in vivo evaluation of the anticarcinogenic and
cancer chemopreventive potential of a flavonoid-rich fraction from a traditional Indian herb
Selaginella bryopteris. British Journal of Nutrition (2011), 106, 1154-1168. (Impact Factor
3.45)
Raghuram, G.V.; Pathak, N.;Jain, D.; Panwar, H.;Pandey, H.; Jain, Subodh Kumar Jain,
Mishra, P.K.: Molecular mechanisms of isocyanate induced oncogenic transformation in
ovarian epithelial cells. Reproductive Toxicology 30 (2010) 377-386. (Impact factor 2.957)
Current Research Grants
RAPD-PCR based biomarker characterization and genetic diversity of stored grain pest C.
maculatus and C. chinentis of Madhya Pradesh. Funded from MPCST
Design and validation of a clinical translational algorithm for molecular risk-assessment of
hepatocellular carcinoma. Funded from UGC
Students
Dr. Bharat Neekhra, Postdoctoral fellow
Abdul Anvesh Mansoori, PhD candidate
Facu
ltyDr Chandrama Prakash Upadhyaya
Assistant Professor Stage II
PhD, Botany
Email: [email protected]
Research interests: Plant Molecular Biology, Plant Functional Genomics, Stress Physiology
and Nutrigenomics
Selected Publications
Chandrama P Upadhyaya, M A Gururani, Ram Prasad and Ajit Verma (2013) A Cell Wall
Extract from Piriformospora indica Promotes Tuberization in Potato (Solanum tuberosum L.)
Via Enhanced Expression of Ca+2 Signaling Pathway and Lipoxygenase Gene. Appl
Biochem Biotechnol. Volume 170, Issue 4, pp 743-755. (Impact factor 2.6)
Mayank A Gururani, Chandrama Prakash Upadhyaya, Reto J strasser, & Se W
Park (2013) Evaluation of abiotic stress tolerance in transgenic potato plants with reduced
expression of PSII manganese stabilizing protein. Plant Science,198. 7–16. (Impact Factor
3.01)
Mayank A Gururani, Chandrama Prakash Upadhyaya, Jelli Venkatesh, V Baskar and Se
Won Park (2013) "Plant growth promoting rhizobacteria enhance abiotic stress tolerance in
Solanum tuberosum through inducing changes in the expression of ROS scavenging
enzymes and improved photosynthetic performance". Journal of Plant Growth
Regulation, June 2013, Volume 32, Issue 2, pp 245-258. (Impact Factor 2.91)
Mayank A Gururani, Chandrama Prakash Upadhyaya, Jelli Venkatesh, Reto J strasser, &
Se Won Park (2012) Physiological and biochemical responses of transgenic potato plants
with altered expression of PSII manganese stabilizing protein indicates its role in potato
tuberization. Plant Physiology and Biochemistry 58, 182–194. (Impact Factor 3.0)
Chandrama Prakash Upadhyaya, Jelli Venkatesh, Mayank Anand Gururani, Leonid Asnin,
Kavita Sharma, and Se Won Park (2011) Transgenic potato overproducing L-ascorbic acid
resisted an increase in methylglyoxal under salinity stress via maintaining higher reduced
glutathione level and glyoxalase enzyme activity. Biotech letters, 2011 Nov;33(11):2297-307.
(Impact Factor 1.61)
Current Research Grants
Isolation, characterization and over-expression of CaM, a calcium dependant protein in
tomato. Funded from DBT under RGYI project.
Investigating and probing RBC-Endothelial cell interaction through ex-vivo cerebral malaria
model to develop adjuvant therapy for malaria pathology. Funded from DBT under twinning
programme in collaboration with IIT Guwahati.
Students
Deepak Baghri, PhD Candidate
Facu
ltyDr Rajaneesh Anupam
Assistant Professor Stage II PhD, Biochemistry and Molecular BiologyEmail: [email protected]
Research interests: Cancer biology, viral host-protein interactions, anti cancer drugs
Selected Publications
Doureiri R*, Anupam R*, Kvaratskhelia M, Green-Church K, Lairmore MD, Green GL.
(2012) Comparative Host Protein Interactions with HTLV-1 p30 and HTLV-2 p28: Insights into Difference in Pathobiology of Human Retroviruses. Retrovirology. 9:64 (Impact factor
5.66) (* equal authors) Highly accessed
Anupam R, Datta A, Kesic M, Green-Church K, Shkriabai N, Kvaratskhelia M, Lairmore
MD. (2011) Human T-lymphotropic Virus Type 1 p30 Interacts with REGγ and Modulates
ATM (Ataxia Telangiectasia Mutated) to Promote Cell Survival. J Biol Chem. 286, 7661-8.
(Impact factor 4.65)
Anupam R, Denapoli L, Muchenditsi A, Hines JV. (2008) Identification of neomycin B-
binding site in T box antiterminator model RNA. Bioorg Med Chem. 16, 4466-70. (Impact
factor 3.15)
Anupam R, Nayek A, Green NJ, Grundy FJ, Henkin TM, Means JA, Bergmeier SC, Hines
JV. (2008) 4,5-Disubstituted oxazolidinones: High affinity molecular effectors of RNA
function. Bioorg Med Chem Lett. 18, 3541-4. (Impact factor 2.43)
Means J, Katz S, Nayek A, Anupam R, Hines JV, Bergmeier SC. (2006) Structure-activity
studies of oxazolidinone analogs as RNA-binding agents. Bioorg Med Chem Lett. 16, 3600-
4 (Impact factor 2.43)
Current Research Grants
Role of HTLV p30 and REG-gamma interaction in DNA damage regulation. Funded from
UGC under start-up grant scheme.
Students
Priyanka Namdev, PhD Candidate
Facu
ltyDr Anamika Bhargava
Assistant Professor PhD, Medical SciencesEmail: [email protected]
Research interests: Voltage gated calcium channels in physiology and pathophysiology, Cell
signaling.
Selected Publications
TingTing Hong, Huanghe Yang, Shan-Shan Zhang, Hee Cheol Cho, Mariya Kalashnikova,
Baiming Sun, Hao Zhang, Anamika Bhargava, Michael Grabe, Jeffrey Olgin, Julia Gorelik,
Eduardo Marban, Lily Y Jan & Robin M Shaw. Cardiac BIN1 folds T-tubule membrane,
controlling ion flux and limiting arrhythmia. Nature Medicine (2014) doi:10.1038/nm.3543.
(Impact factor 24.03)
Anamika Bhargava, Xianming Lin, Pavel Novak, Kinneri Mehta, Yuri Korchev, Mario
Delmar and Julia Gorelik. Super-resolution scanning patch-clamp reveals clustering of
functional ion channels in the adult ventricular myocyte. Circ Res. 2013 Apr 12; 112(8):
1112-20. (Impact factor 9.5)
Singh Anamika, Hildebrand ME, Garcia E and Snutch TP. TRPC antagonist SKF 96365 is
a potent blocker of T-type calcium channels. Br J Pharmacol. 2010 Jul;160(6):1464-75.
(Impact factor 4.4)
Singh Anamika, Gebhart M, Fritsch R, Sinnegger-Brauns M J, Poggiani C, Hoda J C,
Engel J, Romanin C, Striessning J and Koschak A. Fine-tuning of voltage- and Ca2+-
dependent gating of CaV1.3 L-type calcium channels by alternative splicing of a C-terminal
regulatory domain J Biol Chem. 2008 Jul 25;283(30):20733-44. (Impact factor 4.77)
Singh Anamika, Hamedinger D, Hoda J C, Gebhart M, Koschak A, Romanin C &
Striessning J. C-terminal modulator controls Ca2+-dependent gating of CaV1.4 L-type Ca2+
channels. Nat Neurosci. 2006 Sep;9(9):1108-16. (Impact factor 15.53)
Current Research Grants
Role of C-terminus of T-type voltage gated calcium channels in regulating channel activity
and expression”. Funded from DBT under under Bio-CARe scheme.
Students
Divya Rawat, PhD Candidate
Departmental Facilities
DNA Sequencer (CIF) Flow Cytometer (CIF) Plant Tissue Culture
Fridge and -20 Freezer FermentorRotary Shaker
Shaking IncubatorAutoclaveMicroscopePCR Machine
Laminar Air FlowCooling Centrifuge Electronic Balance
Central Facilities
Following instruments are available through the state-of-the-art Central
Instrumental Facility (CIF) of Dr. Hari Singh Gour Vishwavidyalaya:
Confocal Microscope
Atomic Force Microscope
Scanning Electron Microscope (SEM)
Transmission Electron Microscopy (TEM)
Micro-Raman spectrophotometer
Nuclear magnetic resonance (NMR)
Real Time PCR
Ultracentriguge
Nano spray dryer
Fourier transform infrared spectroscope (FTIR)
High performance thin layer chromatograph (HPTLC)
Courses Offered
The Department of Biotechnology currently offers the following
postgraduate courses. The admission to both the courses is
through national entrance exam conducted by Dr. Hari Singh Gour
Vishwavidyalaya during May-june every year.
MSc Biotechnology
Duration: 4 semesters
Total seats: 20
PhD Biotechnology
Duration: 3-4 years
Total seats: Variable depending on the availability with the faculty