david david.abcc.ncifcrf/ genome biol. 2003;4(5):p3 analysis of gene lists using david
DESCRIPTION
DAVID http://david.abcc.ncifcrf.gov/ Genome Biol. 2003;4(5):P3 Analysis of gene lists using DAVID http://www.nature.com/nprot/journal/v4/n1/pdf/nprot.2008.211.pdf. Access tool from here. Upload dataset. Use test dataset. Dataset1_chicken affy.txt. Select Affy ID & gene list. - PowerPoint PPT PresentationTRANSCRIPT
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DAVID http://david.abcc.ncifcrf.gov/Genome Biol. 2003;4(5):P3 Analysis of gene lists using DAVIDhttp://www.nature.com/nprot/journal/v4/n1/pdf/nprot.2008.211.pdf
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Access tool from here
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Upload dataset
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Dataset1_chicken affy.txt
Use test dataset
Select Affy ID & gene list
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Select species
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Select Gallus gallus as background
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Results
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Annotation chart view
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(http://david.abcc.ncifcrf.gov/helps/functional_annotation.html#summary)
What the chart means
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Save results
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Results Download Input IDs
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Results
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Results
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What the results mean
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Downlaod rEsults
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EasyGOBMC Genomics. 2007 Jul 24;8:246. http://bioinformatics.cau.edu.cn/neweasygo/
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Access the tool
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Check supported data types
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Start analysis
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Use chicken affy dataset 1 Choose species Data typeType of test
Email notification optional
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Search status
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ResultsResults browse options
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Flat Form
p-value
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Plain Text
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Browse results in graph mode
Expandimmune systemprocess
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Tree View
Color scale is based on p-value
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User manual
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Earlier version
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Supported data types
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Dataset1_chicken affy.txt will not work as affy IDs are not an option that is available when using earlier version of the tool
OnlyChicken Geneproductsaccepted