curriculum vitae name: vince d. calhoun, ph.d. · 2017-03-22 · 6 revised 23 january 2017 role:...

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Revised 23 January 2017

CURRICULUM VITAE

Name: Vince D. Calhoun, Ph.D.

Born: October 1, 1967, Toledo, Ohio

Family: Married to June; son Jachin (age 14), daughter Anaiah

(age 8), daughter Sarita (age 6)

Education:

B.S. Electrical Engineering, University of Kansas, Lawrence, KS, May 1991

M.A. Biomedical Engineering, Johns Hopkins University, Baltimore, MD, May 1993

M.S. Information Systems, Johns Hopkins University, Baltimore, MD, January 1996

Ph.D. Electrical Eng., Univ. of Maryland Baltimore County, Baltimore, MD, May 2002

Career:

2013- present UNM Distinguished Professor

University of New Mexico, Albuquerque, NM

2013- present Professor, Department of Biology (secondary appointment)


2012-present Executive Science Officer

The Mind Research Network, Albuquerque, NM

2011- 2012 Chief Executive Officer


2011- present Adjunct Senior Scientist

Lovelace Respiratory Research Institute

2010- present Professor, Departments of Electrical and Computer Engineering (primary),

Neurosciences, Computer Science, and Psychiatry


2010 Associate Professor, Department of Psychiatry

The University of New Mexico, Albuquerque, NM

2009-2011 Chief Technology Officer


2009-present Affiliate Professor, Chester F. Carlson Center for Imaging Science

Rochester Institute of Technology, Rochester, NY

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2007-2010 Associate Professor, Department of Computer Science


2007-2010 Associate Professor, Department of Neurosciences


2006- present Director Image Analysis and MR Research


2006-2010 Associate Professor, Department of Electrical and Computer Engineering


2005- present Associate Professor, Adjunct, Department of Psychiatry

Yale University, New Haven, CT

2002- present Assistant Professor, Adjunct, Department of Psychiatry

Johns Hopkins University, Baltimore, MD

2002-2005 Assistant Clinical Professor, Department of Psychiatry

Yale University, New Haven, CT

2002-2006 Director, Medical Image Analysis Laboratory

Institute of Living, Hartford, CT

2001-2002 Senior Research Engineer, Psychiatric Neuroimaging


1996-2001 Research Engineer, Psychiatric Neuroimaging


1993-1996 System Manager/Programmer, Psychiatric Neuroimaging


1993-1993 Research Technician, Laboratory for Studies on the

Controlled Release of Bioactive Materials


1990-1991 Research Assistant, Remote Sensing Laboratory

University of Kansas, Lawrence, KS

Professional Honors or Recognition:

2016 Distinguished Alumni Award, The University of Maryland, Baltimore County

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2016 Awarded Gardner-Zemke Professorship: Presented tri-annually to an ECE faculty

member who has demonstrated exceptional research, teaching, and service performance.

2016 Awarded President’s International Fellowship Award

Chinese Academy of Sciences (CAS)

2015 Fellow, American College of Neuropsychopharmacology

2015 The World’s Most Influential Scientific Minds

2015 Thompson Reuters Highly Cited Researcher (http://highlycited.com/)

2015 IEEE Southwest Area Outstanding Educator Award

2014 Outstanding Engineer Award, Albuquerque IEEE Section

2014 Fellow, American Institute for Medical and Biological Engineering (AIMBE)

2014 Fellow, International Society of Magnetic Resonance in Medicine (ISMRM)

2013 Joel Elkes Research Award

American College of Neuropsychopharmacology

Outstanding teacher award, ISMRM 2013 Educational Course

“Network Discovery with fMRI: Analytic Choices & Their Implications”

2013 Fellow, Institute of Electrical and Electronics Engineers (IEEE)

2013 Fellow, American Association of Advanced Science (AAAS)

2012 Recipient, A. Earl Walker Neuroscience Award

Dept. of Neurosciences, University of New Mexico

2010 Recipient, Outstanding Young Engineer Award

IEEE, Albuquerque Section

2010 Recipient, Distinguished Researcher Award

Department of ECE, University of New Mexico

2008 Recipient, Junior Faculty Research Award

School of Engineering, University of New Mexico

Course on “Independent Component Analysis of BOLD fMRI Data” Selected for International

Society of Magnetic Resonance in Medicine (ISMRM) Global Outreach Program (online

2008-2011)

2006-2013 Senior Member, IEEE

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2006- Member, American College of Neuropsychopharmacology

2006 Recipient, Young Investigator Memorial Travel Award

American College of Neuropsychopharmacology

2005 Recipient, Young Investigator Award

International Congress on Schizophrenia Research

2004 Recipient, Early Career Investigator Award

International Society for Neuroimaging in Psychiatry

2002-2006 Member, IEEE

1992, 1995 Student Travel Award

International Society of Magnetic Resonance in Medicine

1991-2002 Student Member, IEEE

Member, Phi Beta Kappa (honor society)

Member, Omicron Delta Kappa (honor society)

Member, Secretary, Mortar Board (honor society)

Member, President, Tau Beta Pi (engineering honor society)

Member, Eta Kappa Nu (engineering honor society)

List of Funded Research:

Active

NIH/NIBIB; 1R01EB006841 (Calhoun) 4/1/07 – 3/31/16

Multivariate methods for identifying multi-task/multimodal brain

imaging biomarkers

$550,000/year

To develop methods, based upon independent component analysis, for joint-statistical analysis of multi-

task and multimodal brain data (functional MRI, DTI, and structural MRI) to identify multimodal

biomarkers.

Role: Principle Investigator

NIH/NIBIB; 2R01EB005846 (Calhoun) 5/1/09 – 8/31/17

Informed Data-Driven Fusion of Behavior, Brain Function, and Genes $600,000/year

This application proposes to further develop, enhance, and disseminate a set of sophisticated multivariate

analysis tools for combination and examination of data from multiple modalities such as fMRI, ERP,

genomic, and behavioral studies.


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NSF/EPSCoR; 1539067 (Calhoun) 7/1/15 – 6/30/20

RII Track-2 FEC: Developmental Chronnecto-Genomics (Dev-CoG):

A Next Generation Framework for Quantifying Brain Dynamics and

Related Genetic Factors in Childhood

$1,500,000/year

The rapid development of the brain’s network architecture during childhood provides an unprecedented

opportunity to gain a more complete understanding of the role of oscillatory behavior and network

connectivity in normal brain functioning and cognitive development. New Mexico, Nebraska, and

Louisiana envision a consortium on developmental chronnecto-genomics (Dev-CoG) whose overarching

goal is to advance understanding of child-hood brain connectivity by developing new analytic approaches

to study connectivity over brief and extended periods of time (the chronnectome), via multiple

neuroimaging modalities, and in turn determine how their genetic underpinnings further influence this

developmental trajectory.


NIH/NIDA; 1R01DA040487 (Calhoun & Hutchison, Co-PIs) 7/1/15 – 6/30/20

COINSTAC: Decentralized, scalable analysis of loosely coupled data $700,000/year

We are proposing a peer-to-peer system called the Collaborative Informatics and Neuroimaging Suite

Toolkit for Anonymous Computation (COINSTAC) which will provide an independent, open, no-strings

attached and immediately useful tool that facilitates running analysis on datasets distributed across different

locations.


NIH/NIGMS; P20GM103472 (Calhoun) 8/1/08 – 7/31/18

MIND Phase II COBRE:

Multimodal Imaging of Neuropsychiatric Disorders (MIND):

Mechanisms & Biomarkers

$2,400,000/year

Center grant funding 5 junior PIs and 4 cores which examines functional and anatomical connectivity in

schizophrenia, bipolar disorder, and depression using multimodal neuroimaging analyses.


NIH/NIMH 1R01MH094524 (Calhoun & Turner, Co-PIs) 1/1/12 – 12/31/17

Mining the Genomewide Scan: Genetic Profiles of Structural Loss in

Schizophrenia

$600,000/year

The development of both neuroimaging and genome-wide scan technologies have created a proliferation of

data about neuropsychiatric disorders. It is possible to collect more information in a study about each subject

than there are subjects available to study, creating a challenge for standard statistical techniques. We develop

an approach already used separately in imaging and genetics, but apply it here to the combination of imaging

genetic data on a massive dataset, to determine genetic effects on brain structure in psychiatric disorders.

Role: Principle Investigator [Co-PI with Jessica Turner]

NIH/NINDS 1U01NS082074 (Calhoun & Turner, Co-PI) 9/15/13-8/32/16

Imaging and Genetics in Huntington’s Disease $250,000/year

We will use the PREDICT-HD data to determine genetic correlates of brain structure and loss of function, to

reduce the uncertainty in disease progression particularly in subjects whose genetic marker indicates a wide

window of multiple decades in which they might develop the clinical diagnosis.

Role: Principle Investigator [Co-PI with Jessica Turner]

NIH/NIMH 5R41MH100070 (Bockholt & Calhoun, Co-PI) 2/1/13–12/31/15

Neuroinformatics for Prospective Data Management and Sharing $200,000/year

To develop the existing MRN neuroinformatics tools into a user friendly installation package

including multiple authentication options, and full documentation.

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Role: Principle Investigator [Co-PI with Jeremy Bockholt

NIH/NIMH 1R01MH104680 (Wang & Calhoun Co-PI) 7/1/14–6/30/18

Integrative analysis of imaging, genomics, and epigenomics data $480,000/year

In this project we will develop data-driven sparsity methods to combine SNP, methylation and

brain imaging data and apply these methods to large data sets collected in schizophrenia,

bipolar disorder, and healthy controls..

Role: Principle Investigator [Co-PI with Yu-Ping Wang]

NIH/NIMH 1R01MH090169-01A1 (Kosson) 7/1/11 - 6/30/15

Neural Substrate of Cognitive and Emotional Deficits in Psychopathy $400,000/year

The current project examines regional brain activation while offenders and healthy controls

complete cognitive and emotional tasks validated for differentially activating left hemisphere

systems.

Role: Co-Investigator

Completed

NSF; 1116944 (Calhoun) 8/1/2011 – 7/31/2014

CIF: Small: Collaborative Research: Entropy Rate for Source

Separation and Model Selection: Applications in fMRI and EEG

$200,000/year

We will develop a class of powerful methods for source separation—primarily using independent

component analysis (ICA)—and model selection using entropy rate so that we can fully take both the full

higher-order-statistical information and sample correlation into account in the development. We will apply

these techniques to the analysis of functional magnetic resonance (fMRI) data (both the magnitude and full

complex fMRI data) and the rejection of gradient and pulse artifacts in electroencephalography (EEG) in

concurrent EEG-fMRI data. In both cases, information on the nature of source distribution as well as the

extent of correlation—e.g. through the use of reference electrocardiogram (ECG) and eye movement data

collected during the acquisition, as well as the information on the imaging parameters.

Role: Principle Investigator [collaborative project with Tulay Adali @ UMBC]

NSF; 1016619 (Calhoun) 8/15/10–7/31/14

III: Small: Collaborative Research: Canonical Dependence Analysis

for Multi-modal Data Fusion and Source Separation

$170,000/year directs

We will develop a set of powerful tools for multi-subject (multi-set) data analysis and multi-modal data

fusion based on canonical dependence analysis that extends the power and flexibility of multiset canonical

correlation analysis. We will study brain function and functional associations during simulated driving, a

naturalistic task where data-driven methods have proven especially useful. We will also investigate genetic

associations with good or poor driving behavior and will study the brain function variability at different

blood alcohol levels.

Role: Principle Investigator [collaborative project with Tulay Adali @ UMBC]

NIH/NIDA 1R21DA027626 (Liu) 9/1/09 - 8/31/13

A multilevel vulnerability study of substance abuse via CNV, brain

activation and behavior $253,613/yr Direct

This project focuses on the understanding of the vulnerability to substance abuse in different

developmental phases will greatly assist the diagnosis, prevention and treatment plans. The

efficiency and effectiveness of prevention and treatment efforts can also be improved with

increased knowledge about common pathways underlying disorders related to different

substances

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NIH/NIDA 1 R01DA025074 (Hutchison) 9/30/08–8/31/13

Effectiveness of Varenicline: Testing Individual Differences $396,000/yr Direct


2 R44 MH075481-03A2 (Ruano) 09/2/09 - 8/31/13

NIH/NIMH $200,000/yr Direct

MRI DNA Biomarkers for Neuropsychiatric Disease

There is an urgent need for innovative technologies to study the multi-gene etiology of these

disorders for early diagnosis, prevention, and treatment. Advances in the Genomas

PhysioGenomicsTM technology allow us to develop disease related DNA arrays. These

products will enable researchers to couple neuropsychiatric endophenotypes, structural and

functional imaging of the brain) with genetic information from hundreds of genes, including

single nucleotide polymorphisms (SNPs) and haplotypes, to build multigene DNA markers of

disease.

Role: PI on Subcontract

*NIBIB; 1R01EB000840 (Calhoun) 2/1/08-1/31/13

A unified framework for flexible brain image analysis $350,000/year directs

The imaging findings in schizophrenia are widespread, heterogeneous, not diagnostic, and have limited

replicability and it is likely that in part the lack of consistent findings is because most models do not

adequately account for the variability present in the data from schizophrenia patients. The successful

completion of this research will provide a powerful set of algorithms and software tools for the research

community to increase the sensitivity and specificity of functional brain imaging techniques.


*NIMH; 1RC1MH089257 (Calhoun) 9/30/09-9/29/12

Genetic Markers of White Matter Integrity and Clinical Severity in

Schizophrenia


The goal of this Challenge grant application is to identify novel biomarkers of clinical severity in patients

with schizophrenia. There are currently no reliable biomarkers for schizophrenia, so the proposed use of

sophisticated genotyping, neuroimaging and biostatistical tools for searching biomarkers that can predict

disease severity in two large cohorts of patient has a high clinical impact. The identification of such

biomarkers will not only increase our knowledge of the pathophysiology of schizophrenia but also, and

most importantly, may help predict an increased risk for this illness even before the onset of symptoms.


NARSAD; (Calhoun) 4/1/04-3/31/09

Assessment of the State-Trait Specificity of Auditory Cortex fMRI

Synchrony Maps in Schizophrenia and Bipolar Disorder

$60,000 directs

Study of specificity of auditory cortex maps in acute psychotic bipolar patients and after 6 months of

medication. Maps are generated using independent component analysis methods we have developed.

Role: Primary Investigator

RO1MH077945 (Pearlson) 12/1/07–11/30/12

NIH/NIMH

Bipolar & Schizophrenia Consortium for Parsing Endophenotypes $670,295/yr Direct

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The overall goal of the proposed research is to examine a broad panel of putative

endophenotypes in affected individuals with schizophrenia and bipolar and their unaffected

relatives in order to: 1) characterize the degree of familial phenotypic overlap between SZ and

psychotic BP; 2) identify patterns of endophenotypes unique to the two disorders, and 3)

contrast the heritability of endophenotypes across the disorders.


R01MH080956-01 (Stevens) 4/1/08-03/31/13

NIH/NIMH $250,000/yr Direct

Characterizing Two Distinct ADHD Neurobiologies with fMRI

A study using functional imaging, genetic analysis, and neuropsychological assessment to

examine whether there are two separate profiles of neurobiological impairment underlying

impulsive behavior in ADHD.


R01MH081969 (Stevens) 7/1/08-6/30/13

NIH/NIMH

Adolescent maturation of brain network integration for executive

control abilities

$250,000/yr Direct

Develop novel analytic tools for fMRI and aid in structure/function analysis. In addition,

implement the data fusion analysis.


1 R01AA016599 (Pearlson) 2/1/07-1/31/12

NIH/NIAAA $446,656/yr Direct

Alcohol and Drug Use in College Students: Cognition and fMRI

Investigates effects of drug and alcohol use on cognitive abilities, structural and functional

brain MRI in freshman college students, with repeat assessment at 24 months.


NIAAA; 1 RO1 AA015615-01 (Pearlson) 3/1/05 – 2/28/09

Alcohol and Driving: fMRI Studies $250,000/year directs

To study specific cognitive impairments caused by alcohol, their underlying functional anatomy and how

they relate to performance on a validated simulated driving task.

Role: PI on subcontract

NIMH; 1 R01 MH072681-01 (Kiehl) 7/1/05-6/30/09

Abnormal functional connectivity in psychosis $250,000/year

To use functional brain imaging measures to differentially diagnose schizophrenia from

psychotic bipolar illness.


NIMH; K23 MH070036-01 Stevens (PI) 8/01/04 - 7/01/09

Neuroimaging Cognition in Adolescent Behavior Disorders $142,250/year

A 5-year Career Development Award to provide the PI skills for an independent clinical

neuroscience research career investigating how brain function relates to diagnoses associated

with disruptive behavior.

Role: Co-Mentor

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NIH/NIBIB; R01EB005846 (Calhoun) 8/1/05 – 5/31/09

Collaborative Research: Spatiotemporal Fusion of fMRI, EEG, and

Genetic Data Using Independent Component Analysis


To develop data fusion approaches for fMRI, EEG, and gene SNP array data.


*NSF-CCF; 0635129 (Calhoun) 8/1/06-7/31/10

Collaborative Research: Complex-Valued Signal Processing and its

Application to Analysis of Brain Imaging Data


To establish a framework for complex-valued signal processing such that the full potential of complex-

valued signal processing can be realized and the need for simplifying assumptions such as circularity of

signals can be eliminated. We will then show how this framework can be utilized to derive efficient

algorithms for performing ICA in the complex domain, and focus upon functional magnetic resonance

imaging (fMRI), structural MRI (sMRI) and diffusion tensor imaging (DTI).


NSF-SEI; 0612076 (Calhoun) 8/1/06-7/31/10

Collaborative Research: SEI: Independent Component Analysis of

Complex-Valued Brain Imaging Data


To develop multivariate methods for incorporating complex-valued processing strategies in the context of

structural MRI, functional MRI, and diffusion tensor imaging data.


NIMH; 2 RO1 MH43775-14 (Pearlson) 3/1/05 – 2/28/11

Quantitative Neuroimaging in Psychosis $250,000/year

Investigates circuit-wide abnormalities in schizophrenia using functional and structural brain

MRI in schizophrenia and healthy controls.


NIDA; 1 R01 DA020870-01 (Kiehl) 9/1/05-8/31/10

Neurocognitive changes associated with behavioral treatment in

cocaine abusers

$388,096/year

To examine functional and structural changes associated with three cognitive behavioral

treatment protocols in cocaine abusers.


NIH: 1 R24 RR021992 (Potkin) 4/1/06-3/31/12

BIRN: Functional Imaging Research for Schizophrenia Testbed $157,000/year directs

Federated database project involving 19 performance sites. PI involvement in cognitive, statistics, and

calibration workgroups.


NIH/NIMH 5R01MH085010 (Kiehl) 7/17/09 - 4/30/15

The Cognitive Neuroscience of Female Psychopathy $500,000/year

To test the paralimbic dysfunction hypothesis of psychopathy in female offenders using event-

related potentials and functional magnetic resonance imaging


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NIH/NIDA 5R01DA026505 (Kiehl) 9/1/09 - 5/31/15

Socio-moral processing in psychopathy and substance abuse $450,000/year

To use functional imaging to elucidate and characterize the functional neuroanatomy of

processing of moral stimuli for linguistic and picture stimuli in psychopathy and substance

abuse


NIH/NIDA 1R01DA026964 (Kiehl) 7/01/10 - 6/30/15

Action monitoring, action observation and dopamine genes as

predictors of substance abuse $500/year

To utilize multimodal imaging techniques (ERP/fMRI) to characterize the integrity of neural

circuits engaged in action-monitoring in incarcerated drug-abusers


Service:

Member: IEEE EMBS Member Committee Chair, 2016-

Member EURASIP Special Area Team (SAT), 2015-

Signal and Data Analytics for Machine Learning (SiG-DML)

Inaugural Editorial Board Member

Biological Psychiatry: Cognitive Neuroscience and Neuroimaging (BP:CNNI), 2015-

Member

Ontario Brain Institute

Brain-code analytics blue ribbon advisory committee, 2015-

Chair

Machine Learning for Signal Processing, 2015-

Member, Scientific Advisory Board

Organization for Human Brain Mapping, 2014-

Member Texas Tech Neuroimaging Institute

External Advisory Board, 2014-

Vice-Chair

Machine Learning for Signal Processing, 2013-2014

Associate Editor

Journal of Neuroscience Methods, 2013-

Founding Editor-in-Chief: Engineering Section

Computation, 2012-

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Member, Program Committee

2012 International Conference on Pattern Recognition in NeuroImaging (PRNI)

Member of Academic Editorial Board

PeerJ, 2012-

Associate Editor

Frontiers in Brain Imaging Methods, 2012-

Editorial Board

NeuroImage: Clinical, 2012-

Editorial Board

ISRN Biomedical Imaging, 2012-

Editorial Board

Brain Connectivity, 2010-


Mathematical Methods in Biomedical Image Analysis (MMBIA)

San Francisco, 2010


First International Conference on Pattern Recognition (ICPR) workshop on Brain Decoding

Pattern recognition challenges in fMRI neuroimaging, Aug 2010

Treasurer, Organization for Human Brain Mapping, June 2009-2011

NIH Study Section, Biomedical Imaging Technology (BMIT)

Charter Member, Nov 2009-2013


2009 International Congress on Schizophrenia Research (ICOSR2009)

Member, Technical Committee

2009 IEEE Workshop on Statistical Signal Processing (SSP2009)

NIH Study Section, Genetics and Psychopathology (ZRG1 HOP-V), Feb 2008

NIH Study Section, Surgical Sciences, Biomed. Imaging and Bioeng. (SBIB-J), June 2007

Member

IEEE Signal Processing Society BISP Technical Committee, 2008-2012

Member, Program Committee IEEE International Symposium on Signal Processing and

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Information Technology (IEEE ISSPIT'08)

Editorial Board

NeuroImage, 2008-2012, 2014-

Editorial Board

Frontiers in Human Neuroscience, 2007-

Editorial Board

The Open Biomedical Engineering Journal, 2007-

Associate Editor

International Journal of Computational Intelligence and Neuroscience, 2006-

Chapter Organizer, 2006

IEEE EMBS, Albuquerque

Associate Editor

IEEE Signal Processing Letters, 2005-2009

NIH Study Section, Biomedical Imaging Technology (BMIT), June 2005, Feb 2006, Sept 2007

Natural Sciences and Engineering Research Council of Canada (NSERC), Ad hoc grant

reviewer, Jan 2006, Dec 2012

The Scottish Executive Health Department, Ad hoc grant reviewer, Feb 2006

NIH Study Section, RFA New way of imaging neural activity, April 2006

The Wellcome Trust, Ad hoc grant reviewer, March 2005, May 2006

NSF Grant Review Panel (CRCNS), March 2006

NSF Grant Review (BCS), November 2006

Netherlands Organization for Scientific Research (NWO), Social Sciences, grant reviewer,

Nov 2006

General Chair

Machine Learning for Signal Processing 2005, Mystic Connecticut

Member, Technical Committee

First International Workshop on Biosignal Processing and Classification (BPC), 2005-


International Conference on Intelligent Knowledge Systems (IKS-2005)

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NIH Study Section, Ad hoc member, Human Brain Project (HBP)/Neuroinformatics, 2005

Editorial Board

Human Brain Mapping 2004-

Member, Technical Program Committee

Machine Learning for Signal Processing (MLSP), 2004-

Member, Advisory Board

International Conference on Informatics (ICI-2004)

NIH Study Section, Ad hoc member, Human Brain Project (HBP)/BIST (Biomedical

Information Science and Technology), Feb 2004

Member, Technical Program Committee

Neural Networks for Signal Processing (NNSP 2003)

Member: Tau Beta Pi Mentoring Program, 2003-

Member: International Review Panel, 2003-

Medical Science Monitor

UNM Service:

Member: Research Excellence Working Group, 2016-2017

The University of New Mexico

Member: Internal Advisory Board

UNM Center on Alcoholism, Substance Abuse, and Addictions (CASAA), 2015-

Member: Internal Advisory Board

UNM Center for Advanced Research Computation (CARC), 2015-

Member: Department of ECE Chair Selection Committee, 2015-

Member: Distinguished Professor Selection Committee, 2014-

Member: School of Engineering Promotion and Tenure Committee, 2011-

Member: CTSC Multidisciplinary Advisory Committee, Fall 2011-present

Member: Engineering Dean’s Selection Committee, 2009

Member: ECE Promotion & Tenure Committee, 2008

Member: ECE Strategic Planning Committee, 2008/2009

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Area Chair: CompE Group, Spring 2007-Spring 2009

Member: Graduate Committee, ECE, Fall 2007-present

Member: CompE Faculty Search Committee, Fall 2006

Chair: Bioengineering Committee, Fall 2006-present

Chapter organizer: UNM IEEE Engineering in Medicine and Biology Chapter, 2007-present

Member, Advisory council

Program in Interdisciplinary Biological and Biomedical Sciences (PIBBS), 2007-2015

Full Bibliography (h-index = 83; i10-index = 386; 27941 citations as of Jan. 2017):

Peer Reviewed Journal Articles (511 published or in press journal articles):

[1] B. Reisfeld, S. Blackband, V. D. Calhoun, S. Grossman, S. Eller, and K. Leong, "The use of

magnetic resonance imaging to track controlled drug release and transport in the brain,"

Mag.Res.Imag., vol. 11, pp. 247-252, 1993.

[2] S. Kalyanasundaram, V. D. Calhoun, and K. W. Leong, "A finite element model for predicting

the distribution of drugs delivered intracranially to the brain," Am.J.Physiol., vol. 273, pp.

R1810-R1821, 1997.

[3] V. D. Calhoun, T. Adalı, M. Kraut, and G. D. Pearlson, "A Weighted-Least Squares Algorithm

for Estimation and Visualization of Relative Latencies in Event-Related functional MRI,"

Magn.Res.Med., vol. 44, pp. 947-954, 2000.

[4] V. D. Calhoun, T. Adalı, V. McGinty, J. J. Pekar, T. Watson, and G. D. Pearlson, "fMRI

Activation In A Visual-Perception Task: Network Of Areas Detected Using The General Linear

Model And Independent Component Analysis," NeuroImage, vol. 14, pp. 1080-1088, 2001.

[5] V. D. Calhoun, T. Adalı, G. D. Pearlson, and J. J. Pekar, "A Method for Making Group

Inferences from Functional MRI Data Using Independent Component Analysis," Human Brain

Mapping, vol. 14, pp. 140-151, 2001.

[6] V. D. Calhoun, T. Adalı, G. D. Pearlson, and J. J. Pekar, "Spatial and temporal independent

component analysis of functional MRI data containing a pair of task-related waveforms,"

Hum.Brain Map., vol. 13, pp. 43-53, 2001.

[7] V. D. Calhoun, T. Adalı, G. D. Pearlson, P. C. van Zijl, and J. J. Pekar, "Independent component

analysis of fMRI data in the complex domain," Magn Reson.Med., vol. 48, pp. 180-192, 2002.

[8] V. D. Calhoun, J. J. Pekar, V. B. McGinty, T. Adalı, T. D. Watson, and G. D. Pearlson, "Different

activation dynamics in multiple neural systems during simulated driving," Hum.Brain Map., vol.

16, pp. 158-167, 2002.

[9] A. Horska, V. D. Calhoun, D. H. Bradshaw, and P. B. Barker, "A rapid method for correction of

partial CSF volume in quantitative proton MR spectroscopic imaging," Magn.Res.Med., vol. 48,

pp. 555-558, 2002.

[10] M. A. Kraut, S. Kremen, L. R. Moo, J. B. Segal, V. D. Calhoun, and J. Hart, Jr., "Object

activation in semantic memory from visual multimodal feature input," J.Cogn Neurosci., vol. 14,

pp. 37-47, 2002.

[11] M. A. Kraut, S. Kremen, J. B. Segal, V. D. Calhoun, L. R. Moo, and J. Hart, Jr., "Object

activation from features in the semantic system," J.Cogn Neurosci., vol. 14, pp. 24-36, 2002.

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[12] N. Mikhelashvili-Browner, D. M. Yousem, A. S. Mandir, V. D. Calhoun, C. Wu, K. K. Oguz,

and C. L. Vaughan, "Correlation of reaction time in and out of the functional MR unit,"

Acad.Radiol., vol. 9, pp. 513-519, 2002.

[13] V. D. Calhoun, T. Adalı, J. J. Pekar, and G. D. Pearlson, "Latency (in)sensitive ICA: Group

Independent Component Analysis of fMRI Data in the Temporal Frequency Domain,"

NeuroImage, vol. 20, pp. 1661-1669, 2003.

[14] M. Kraut, V. D. Calhoun, J. Pitcock, C. Cusik, and J. Hart, "Neural Hybrid Model of Semantic

Object Memory: Implications from Event-Related Timing Using fMRI," J.Int.Neuropsychol.Soc.,

vol. 9, pp. 1031-1040, 2003.

[15] N. Mikhelashvili-Browner, D. M. Yousem, C. Wu, M. A. Kraut, C. L. Vaughan, K. K. Oguz, and

V. D. Calhoun, "Lack of sex effect on brain activity during a visuomotor response task:

functional MR imaging study," AJNR Am.J.Neuroradiol., vol. 24, pp. 488-494, 2003.

[16] M. A. Mohamed, D. M. Yousem, A. Tekes, N. M. Browner, and V. D. Calhoun, "Timing of

cortical activation: a latency-resolved event-related functional MR imaging study," AJNR

Am.J.Neuroradiol., vol. 24, pp. 1967-1974, 2003.

[17] S. H. Mostofsky, J. G. Schafer, M. T. Abrams, M. C. Goldberg, A. A. Flower, A. Boyce, S. M.

Courtney, V. D. Calhoun, M. A. Kraut, M. B. Denckla, and J. J. Pekar, "fMRI evidence that the

neural basis of response inhibition is task-dependent," Brain Res.Cogn Brain Res., vol. 17, pp.

419-430, 2003.

[18] K. K. Oguz, N. M. Browner, V. D. Calhoun, C. Wu, M. A. Kraut, and D. M. Yousem,

"Correlation of functional MR imaging activation data with simple reaction times," Radiology,

vol. 226, pp. 188-194, 2003.

[19] V. D. Calhoun, T. Adalı, and G. D. Pearlson, "Independent Component Analysis Applied to fMRI

Data: A Generative Model for Validating Results," Journal of VLSI Signal Proc.Systems, vol. 37,

pp. 281-291, 2004.

[20] V. D. Calhoun, D. Altschul, V. McGinty, R. A. Shih, D. Scott, and G. D. Pearlson, "Alcohol

Intoxication Effects on Visual Perception: An fMRI Study," Hum Brain Mapp, vol. 21, pp. 15-26,

2004.

[21] V. D. Calhoun, K. A. Kiehl, P. F. Liddle, and G. D. Pearlson, "Aberrant Localization of

Synchronous Hemodynamic Activity in Auditory Cortex Reliably Characterizes Schizophrenia,"

Biological Psychiatry, vol. 55, pp. 842-849, 2004, PMC2771440.

[22] V. D. Calhoun, M. Stevens, G. D. Pearlson, and K. A. Kiehl, "FMRI analysis with the general

linear model: Removal of latency-induced amplitude bias by incorporation of hemodynamic

derivative terms," NeuroImage, vol. 22, pp. 252-257, 2004.

[23] V. D. Calhoun, J. J. Pekar, and G. D. Pearlson, "Alcohol Intoxication Effects on Simulated

Driving: Exploring Alcohol-Dose Effects on Brain Activation Using Functional MRI,"

Neuropsychopharmacology, vol. 29, pp. 2097-2107, 2004.

[24] V. D. Calhoun, T. Adalı, and J. J. Pekar, "A method for comparing group fMRI data using

independent component analysis: application to visual, motor and visuomotor tasks," Magn

Reson Imaging, vol. 22, pp. 1181-1191, Nov 2004.

[25] J. S. Kim, S. A. Reading, T. Brashers-Krug, V. D. Calhoun, C. A. Ross, and G. D. Pearlson,

"Functional MRI study of a serial reaction time task in Huntington's disease," Psychiatry Res.,

vol. 131, pp. 23-30, 2004.

[26] M. A. Mohamed, D. M. Yousem, A. Tekes, N. Browner, and V. D. Calhoun, "Correlation

between the amplitude of cortical activation and reaction time: a functional MRI study," AJR

Am.J.Roentgenol., vol. 183, pp. 759-765, 2004.

[27] R. S. Astur, S. Germain, E. Baker, V. D. Calhoun, G. D. Pearlson, and R. T. Constable, "fMRI

Hippocampal Activity During a Virtual Radial Arm Maze," Applied Psychophysiology and

Biofeedback, vol. 30, pp. 307-317, 2005.

16


[28] V. D. Calhoun, T. Adalı, M. Stevens, K. A. Kiehl, and J. J. Pekar, "Semi-blind ICA of fMRI: A

method for utilizing hypothesis-derived time courses in a spatial ICA analysis," NeuroImage, vol.

25, pp. 527-538, 2005.

[29] V. D. Calhoun, K. Carvalho, R. S. Astur, and G. D. Pearlson, "Using Virtual Reality to Study

Alcohol Intoxication Effects on the Neural Correlates of Simulated Driving," Applied

Psychophysiology and Biofeedback, vol. 30, pp. 285-306, 2005.

[30] N. Giuliani, V. D. Calhoun, G. D. Pearlson, A. Francis, and R. W. Buchanan, "Voxel-Based

Morphometry versus Regions of Interest: A Comparison of Two Methods for Analyzing Gray

Matter Disturbances in Schizophrenia," Schizophr.Res., vol. 74, pp. 135-147, 2005.

[31] B. Hong, G. D. Pearlson, and V. D. Calhoun, "Source-Density Driven Independent Component

Analysis Approach for fMRI Data," Hum.Brain Map., vol. 25, pp. 297-307, 2005.

[32] K. A. Kiehl, M. Stevens, K. R. Laurens, G. D. Pearlson, V. D. Calhoun, and P. F. Liddle, "An

adaptive reflexive processing model of neurocognitive function: Supporting evidence from a

large scale (n=100) fMRI study of an auditory oddball task," NeuroImage, vol. 25, pp. 899-915,

2005.

[33] H. Snoussi and V. D. Calhoun, "Regularized Spectral Matching for Blind Source Separation.

Application to fMRI Imaging," IEEE Trans.Signal Proc., vol. 53, pp. 3373-3383, 2005.

[34] M. Stevens, V. D. Calhoun, and K. A. Kiehl, "Hemispheric Differences in Hemodynamics

Elicited by Auditory Oddball Stimuli," NeuroImage, vol. 26, pp. 782-792, 2005.

[35] M. Stevens, V. D. Calhoun, and K. A. Kiehl, "fMRI in an oddball task: effects of target-to-target

interval," Psychophysiology, vol. 42, pp. 636-642, 2005.

[36] A. Tekes, M. Noureldin, M. Kraut, V. D. Calhoun, N. Browner, and D. M. Yousem, "Effect of

age on visuomotor functional MR imaging " Acad.Radiol., vol. 12, pp. 739-745, 2005.

[37] T. Adalı and V. D. Calhoun, "Wide Open Window: Theme Issue on fMRI Data Analysis," IEEE

Eng.in Medicine and Biology, vol. 25, pp. 22-23, 2006.

[38] M. Assaf, P. Rivkin, C. Kuzu, V. D. Calhoun, M. A. Kraut, K. Groth, M. Yassa, J. Hart, Jr., and

G. D. Pearlson, "Abnormal Semantic Object-Recall and Anterior Cingulate Overactivation

Correlate with Formal Thought Disorder in Schizophrenia," Biological Psychiatry, vol. 59, pp.

452-459, 2006.

[39] M. Assaf, V. D. Calhoun, C. Kuzu, M. A. Kraut, P. Rivkin, J. Hart, Jr., and G. D. Pearlson,

"Neural Correlates of Object Recall Process in Semantic Memory," Psych.Res.Neuroimaging,

vol. 147, pp. 115-126, 2006.

[40] V. D. Calhoun and T. Adalı, "Complex Infomax: Convergence and Approximation of Infomax

with Complex Nonlinearities," Journal of VLSI Signal Proc.Systems, vol. 44, pp. 173-190, 2006.

[41] V. D. Calhoun, T. Adalı, K. A. Kiehl, R. S. Astur, J. J. Pekar, and G. D. Pearlson, "A Method for

Multi-task fMRI Data Fusion Applied to Schizophrenia," Human Brain Mapping, vol. 27, pp.

598-610, 2006, PMC2751648.

[42] V. D. Calhoun, T. Adalı, N. Giuliani, J. J. Pekar, G. D. Pearlson, and K. A. Kiehl, "A Method for

Multimodal Analysis of Independent Source Differences in Schizophrenia: Combining Gray

Matter Structural and Auditory Oddball Functional Data," Hum.Brain Map., vol. 27, pp. 47-62,

2006.

[43] V. D. Calhoun and T. Adali, "Unmixing fMRI with independent component analysis," IEEE Eng

Med Biol Mag, vol. 25, pp. 79-90, Mar-Apr 2006.

[44] V. D. Calhoun, G. D. Pearlson, and K. A. Kiehl, "Neuronal Chronometry of Target Detection:

Fusion of Hemodynamic and Event-related Potential Data," NeuroImage, vol. 30, pp. 544-553,

2006.

[45] K. Carvalho, G. D. Pearlson, R. S. Astur, and V. D. Calhoun, "Simulated Driving and Brain

Imaging: Combining Behavior, Brain Activity, and Virtual Reality," CNS Spectrum, vol. 11, pp.

52-62, 2006.

[46] K. A. Celone, V. D. Calhoun, B. C. Dickerson, A. Atri, E. F. Chua, S. Miller, K. DePeau, D. M.

Rentz, D. Selkoe, M. S. Albert, and R. A. Sperling, "Alterations in Memory Networks in Mild

17


Cognitive Impairment and Alzheimer's Disease: An Independent Component Analysis," Journal

of Neuroscience, vol. 26, pp. 10222-10231, 2006.

[47] M. R. Johnson, N. Morris, R. S. Astur, V. D. Calhoun, D. H. Mathalon, K. A. Kiehl, and G. D.

Pearlson, "A Functional Magnetic Resonance Imaging Study of Working Memory Abnormalities

in Schizophrenia," Biological Psychiatry, 2006.

[48] M. A. Kraut, J. Pitcock, V. D. Calhoun, J. Li, T. Freeman, and J. Hart, Jr., "Neuroanatomic

Organization of Sound Memory in Humans," J Cogn Neurosci., vol. 18, pp. 1877-1888, 2006.

[49] Z. Wang, J. Wang, V. D. Calhoun, H. Rao, J. A. Detre, and A. R. Childress, "Strategies for

reducing large fMRI data sets for ICA," Mag.Res.Imag., vol. 24, pp. 591-596, 2006.

[50] T. Adalı and V. D. Calhoun, "Complex ICA of Brain Imaging Data," IEEE Signal Proc.

Magazine, vol. 24, pp. 136-139, 2007.

[51] V. D. Calhoun and G. D. Pearlson, "Recent Developments in Brain Imaging of Schizophrenia: A

Selective Review," Neuroscience Imaging, vol. 1, pp. 279-294, 2007.

[52] N. Correa, T. Adalı, and V. D. Calhoun, "Performance of Blind Source Separation Algorithms for

fMRI Analysis," Mag.Res.Imag., vol. 25, p. 684, 2007, PMC2358930.

[53] A. Garrity, G. D. Pearlson, K. McKiernan, D. Lloyd, K. A. Kiehl, and V. D. Calhoun, "Aberrant

'default mode' functional connectivity in schizophrenia," Am.J.Psychiatry, vol. 164, pp. 450-457,

2007.

[54] M. P. Hejnar, K. A. Kiehl, and V. D. Calhoun, "Interparticipant Correlations: A Model Free

FMRI Analysis Technique," Hum.Brain Map., vol. 28, pp. 860-867, 2007.

[55] Y. O. Li, T. Adali, and V. D. Calhoun, "Estimating the number of independent components for

functional magnetic resonance imaging data," Hum Brain Mapp, vol. 28, pp. 1251-1266, Nov

2007.

[56] Y. Li, T. Adalı, and V. D. Calhoun, "A Feature-selective Independent Component Analysis

Method for Functional MRI," Int. J. Biomed. Imaging, 2007.

[57] Q. Lin, Y. Zheng, F. Yin, H. Liang, and V. D. Calhoun, "A Fast Algorithm for One-unit ICA-R,"

Information Sciences, vol. 177, pp. 1265-1275, 2007.

[58] G. D. Pearlson and V. D. Calhoun, "Structural and Functional Magnetic Resonance Imaging In

Psychiatric Disorders," Can. J Psychiatry, vol. 52, 2007.

[59] C. Sorg, V. Riedl, M. Muhlau, V. D. Calhoun, L. L., A. Drzezga, H. Forstl, A. Kurz, C. Zimmer,

and A. Wohlschlager, "Selective changes of resting-state networks in patients at high risk for

Alzheimer’s disease – an example for profiling functional brain disorders," Proc Natl Acad Sci U

S A, vol. 104, pp. 18760-18765, 2007.

[60] M. Stevens, K. A. Kiehl, G. D. Pearlson, and V. D. Calhoun, "Functional neural circuits for

mental timekeeping," Hum.Brain Map., vol. 28, pp. 394-408, 2007.

[61] M. C. Stevens, K. A. Kiehl, G. D. Pearlson, and V. D. Calhoun, "Functional neural networks

underlying response inhibition in adolescents and adults," Behav Brain Res, vol. 181, pp. 12-22,

Jul 19 2007, 2266817.

[62] T. Adalı, Z. J. Wang, M. J. McKeown, P. Ciuciu, L. K. Hansen, A. Cichocki, and V. D. Calhoun,

"Introduction to the Issue on fMRI Analysis for Human Brain Mapping," IEEE JSTSP, vol. 2, pp.

813-816, 2008, PMC pending #163062.

[63] V. D. Calhoun, G. D. Pearlson, P. Maciejewski, and K. A. Kiehl, "Temporal Lobe and 'Default'

Hemodynamic Brain Modes Discriminate Between Schizophrenia and Bipolar Disorder," Hum.

Brain Map., vol. 29, pp. 1265-1275, 2008, PMC2665178.

[64] V. D. Calhoun, K. A. Kiehl, and G. D. Pearlson, "Modulation of temporally coherent brain

networks estimated using ICA at rest and during cognitive tasks," Human Brain Mapping, vol.

29, pp. 828-838, Jul 2008, PMC pending #162999.

[65] A. Caprihan, G. D. Pearlson, and V. D. Calhoun, "Application of Principal Component Analysis

to Distinguish Patients with Schizophrenia from Healthy Controls Based on Fractional

Anisotropy Measurements," NeuroImage, vol. 42, pp. 675-682, 2008, PMC2566788.

18


[66] Z. Chen and V. D. Calhoun, "Compensating the intensity falling-off effect in cone-beam

tomography by an emiprical weight formula," Applied Optics, vol. 47, pp. 6033-6039, 2008,

PMC pending #163061.

[67] N. Correa, Y. Li, T. Adalı, and V. D. Calhoun, "Canonical correlation analysis for feature-based

fusion of biomedical imaging modalities to detect associative networks in Schizophrenia," IEEE

JSTSP, vol. 2, pp. 998-1007, 2008, PMC2761661.

[68] O. Demirci, V. P. Clark, and V. D. Calhoun, "A Projection Pursuit Algorithm to Classify

Individuals Using fMRI Data: Application to Schizophrenia," NeuroImage, vol. 15, pp. 1774-

1782, 2008, PMC2764259.

[69] O. Demirci, V. P. Clark, V. Magnotta, N. C. Andreasen, J. Lauriello, K. A. Kiehl, G. D. Pearlson,

and V. D. Calhoun, "A Review of Challenges in the use of fMRI for Disease Classification /

Characterization and A Projection Pursuit Application from Multi-site fMRI Schizophrenia

Study," Brain Imaging and Behavior, vol. 2, pp. 207-226, 2008, PMC2701746.

[70] N. Driesen, H. C. Leung, V. D. Calhoun, R. T. Constable, R. Gueorguieva, R. Hoffman, P.

Skudlarski, P. Goldman-Rakic, and J. Krystal, "Impairment of Working Memory Maintenance

and Response in Schizophrenia: Functional Magnetic Resonance Imaging Evidence," Biological

Psychiatry, vol. 64, pp. 1026-1034, 2008, PMC pending #163006.

[71] T. Eichele, V. D. Calhoun, M. Moosmann, K. Specht, M. Jongsma, R. Quiroga, H. Nordby, and

K. Hugdahl, "Unmixing concurrent EEG-fMRI with parallel independent component analysis,"

Int. J. Psych., vol. 67, pp. 222-234, 2008, PMC2649878.

[72] T. Eichele, S. Debener, V. D. Calhoun, K. Specht, A. K. Engel, K. Hugdahl, D. Y. von Cramon,

and M. Ullsperger, "Prediction of human errors by maladaptive changes in event-related brain

networks," Proc Natl Acad Sci U S A, vol. 105, pp. 6173-6178, Apr 22 2008, PMC2329680.

[73] A. R. Franco, J. Ling, A. Caprihan, V. D. Calhoun, R. Jung, G. L. Heileman, and A. R. Mayer,

"Multimodal and Multi-tissue Measures of Connectivity Revealed by Joint Independent

Component Analysis," IEEE JSTSP, vol. 2, pp. 986-997, 2008, PMC2748354.

[74] M. Jafri, G. D. Pearlson, M. Stevens, and V. D. Calhoun, "A Method for Functional Network

Connectivity Among Spatially Independent Resting-State Components in Schizophrenia,"

NeuroImage, vol. 39, pp. 1666-1681, 2008, PMC pending #40720.

[75] D. I. Kim, G. Pearlson, K. A. Kiehl, E. Bedrick, O. Demirci, and V. D. Calhoun, "A Method for

Multi-group Inter-Participant Correlation: Abnormal Synchrony in Patients with Schizophrenia

During Auditory Target Detection," NeuroImage, vol. 39, pp. 1129-1141, 2008, PMC2751604.

[76] D. Kim, J. Burge, T. Lane, K. A. Kiehl, G. D. Pearlson, and V. D. Calhoun, "Hybrid ICA-

Bayesian Network approach reveals distinct effective connectivity differences in schizophrenia,"

NeuroImage, vol. 42, pp. 1560-1568, 2008, PMC2566775.

[77] J. Liu, O. Demirci, and V. D. Calhoun, "A Parallel Independent Component Analysis Approach

to Investigate Genomic Influence on Brain Function," IEEE Signal Proc. Letters, vol. 15, pp. 413-

416, 2008, PMC2761666.

[78] S. Meda, J. Gelernter, J. R. Gruen, V. D. Calhoun, H. Meng, N. A. Cope, and G. D. Pearlson,

"Polymorphism of DCDC2 reveals differences in cortical morphology of healthy individuals – A

preliminary voxel based morphometry study," Brain Imaging and Behavior, vol. 2, pp. 21-26,

2008, PMC2605089.

[79] S. Meda, N. Giuliani, V. D. Calhoun, K. Jagannathan, D. Schretlen, A. Pulver, N. Cascella, M.

Keshavan, W. Kates, R. J. Buchanan, T. Sharma, and G. Pearlson, "A large scale (N=400)

investigation of gray matter differences in schizophrenia using optimized voxel-based

morphometry," Schizophrenia Research, vol. 101, pp. 95-105, 2008, PMC pending #163012.

[80] S. A. Meda, M. Bhattarai, N. A. Morris, R. S. Astur, V. D. Calhoun, D. H. Mathalon, K. A. Kiehl,

and G. D. Pearlson, "An fMRI study of working memory in first-degree unaffected relatives of

schizophrenia patients," Schizophr Res, vol. 104, pp. 85-95, Sep 2008, PMC2577216.

19


[81] M. Moosmann, T. Eichele, H. Nordby, K. Hugdahl, and V. D. Calhoun, "Joint Independent

Component Analysis for Simultaneous EEG-fMRI: Principle and Simulation," Int. J. Psych., vol.

67, pp. 212-221, 2008, PMC2649876.

[82] J. Roffmann, R. L. Gollub, V. D. Calhoun, T. Wassink, A. P. Weiss, B. C. Ho, T. White, V. P.

Clark, J. Fries, N. C. Andreasen, D. C. Goff, and D. S. Manoach, "MTHFR 677C->T genotype

disrupts prefrontal function in schizophrenia through an interaction with COMT 158Val->Met,"

Proc Natl Acad Sci U S A, 2008, PMC Journal - In Process.

[83] L. R. Skelly, V. D. Calhoun, S. A. Meda, J. Kim, D. H. Mathalon, and G. D. Pearlson, "Diffusion

Tensor Imaging in Schizophrenia: Relationship to Symptoms," Schizophrenia Research, vol. 98,

pp. 157-162, 2008, PMC2668961.

[84] P. Skudlarski, K. Jagannathan, V. D. Calhoun, M. Hampson, B. A. Skudlarska, and G. Pearlson,

"Measuring brain connectivity: diffusion tensor imaging validates resting state temporal

correlations," Neuroimage, vol. 43, pp. 554-561, Nov 15 2008, PMC pending #78507.

[85] A. Windemuth, V. D. Calhoun, G. D. Pearlson, M. Kocherla, K. Jagannathan, and G. Ruano,

"Physiogenomic Analysis of Localized fMRI Brain Activity in Schizophrenia," Annals of

Biomedical Engineering, vol. 36, pp. 877-888, 2008, PMC2669662.

[86] A. J. Allen, S. Meda, P. Skudlarski, V. D. Calhoun, R. Astur, K. Ruopp, and G. D. Pearlson,

"Effects of alcohol on performance on a distraction task during simulated driving," Alcoholism:

Clinical & Experimental Research, vol. 33, pp. 1-9, 2009, PMC2753192.

[87] M. Assaf, I. Kahn, G. D. Pearlson, M. R. Johnson, Y. Yeshurun, V. D. Calhoun, and T. Hendler,

"Brain Activity Dissociates Mentalization from Motivation during an Interpersonal Competitive

Game," Brain Imaging and Behavior, vol. 3, pp. 24-37, 2009, PMC pending #163069.

[88] M. Assaf, K. Jagannathan, V. D. Calhoun, M. Kraut, J. Hart, and G. D. Pearlson, "Temporal

Sequence of Hemispheric Network Activation during Semantic Processing: A Functional

Network Connectivity Analysis " Brain and Cognition, vol. 70, pp. 238-246, 2009, PMC2680694.

[89] G. Brown, G. McCarthy, D. N. Greve, S. Potkin, J. Turner, A. Bischoff-Grethe, J. M. Ford, D.

Mathalon, R. Notestine, S. Gadde, V. D. Calhoun, G. H. Glover, C. G. Wible, A. Belger, R. L.

Gollub, J. Lauriello, D. O'Leary, and K. Lim, "Brain-Performance Correlates of Working

Memory Retrieval in Schizophrenia: A Cognitive Modeling Approach," Schizophr Bull, vol. 35,

pp. 32-46, 2009, PMC Journal - In Process.

[90] V. D. Calhoun and T. Adalı, "Feature-based Fusion of Medical Imaging Data," IEEE

Transactions on Information Technology in Biomedicine, vol. 13, pp. 1-10, 2009, PMC2737598.

[91] V. D. Calhoun, J. Liu, and T. Adalı, "A Review of Group ICA for fMRI Data and ICA for Joint

Inference of Imaging, Genetic, and ERP data," NeuroImage, vol. 45, pp. 163-172, 2009,

PMC2651152.

[92] V. D. Calhoun, T. Eichele, and G. Pearlson, "Functional brain networks in schizophrenia: a

review," Front Hum Neurosci, vol. 3, p. 17, 2009, 2737438.

[93] O. Demirci, M. C. Stevens, N. C. Andreasen, A. Michael, J. Liu, T. White, G. D. Pearlson, V. P.

Clark, and V. D. Calhoun, "Investigation of relationships between fMRI brain networks in the

spectral domain using ICA and Granger causality reveals distinct differences between

schizophrenia patients and healthy controls," NeuroImage, vol. 46, pp. 419-431, 2009,

PMC2713821.

[94] O. Demirci and V. D. Calhoun, "Functional Magnetic Resonance Imaging - Implications for

Detection of Schizophrenia," European Neurological Review, vol. 4, pp. 103-106, 2009, PMC

pending #184791.

[95] T. Eichele, V. D. Calhoun, and S. Debener, "Mining EEG-fMRI using independent component

analysis," Int. J. Psych., vol. 73, pp. 53-61, 2009, PMC2693483.

[96] Z. Feng, A. Caprihan, K. Blagoev, and V. D. Calhoun, "Biophysical Modeling of Phase Changes

in BOLD fMRI," NeuroImage, vol. 47, pp. 540-548, 2009, PMC pending #115413.

[97] J. M. Ford, B. J. Roach, K. W. Jorgensen, J. A. Turner, G. G. Brown, R. Notestine, A. Bischoff-

Grethe, D. Greve, C. Wible, J. Lauriello, A. Belger, B. A. Mueller, V. Calhoun, A. Preda, D.

20


Keator, D. S. O'Leary, K. O. Lim, G. Glover, S. G. Potkin, Fbirn, and D. H. Mathalon, "Tuning in

to the voices: a multisite FMRI study of auditory hallucinations," Schizophr Bull, vol. 35, pp. 58-

66, Jan 2009, PMC2643968.

[98] A. R. Franco, A. Pritchard, V. D. Calhoun, and A. R. Mayer, "Inter-rater and Inter-method

Reliability of Default Mode Network Selection," Human Brain Mapping, vol. 30, pp. 2293-2303,

2009, PMC2751639.

[99] G. Goldstein, K. Panchalingam, R. J. McClure, J. A. Stanley, V. D. Calhoun, G. D. Pearlson, and

J. W. Pettegrew, "Molecular Neurodevelopment: An in vivo 31 P - 1 H MRSI Study," Journal of

the International Neuropsychological Society, vol. 15, pp. 671-683, 2009, PMC2773163.

[100] C. C. Hong, J. C. Harris, G. D. Pearlson, J. S. Kim, V. D. Calhoun, J. H. Fallon, X. Golay, J. S.

Gillen, D. J. Simmonds, P. C. M. van zijl, D. S. Zee, and J. J. Pekar, "fMRI Evidence for

Multisensory Recruitment Associated with Rapid Eye Movements during Sleep," Hum Brain

Mapp, vol. 30, pp. 1705-1722, 2009, PMC2753360.

[101] D. Kim, D. S. Manoach, D. Mathalon, J. Turner, G. Brown, J. M. Ford, R. L. Gollub, T. White,

C. G. Wible, A. Belger, H. J. Bockholt, V. P. Clark, J. Lauriello, D. O'Leary, G. McCarthy, B.

Mueller, K. Lim, N. C. Andreasen, S. Potkin, and V. D. Calhoun, "Dysregulation of working

memory and default-mode networks in schizophrenia during a Sternberg item recognition

paradigm: an independent component analysis of the multisite Mind and fBIRN studies," Hum

Brain Mapp, vol. 30, p. 3795, 2009, PMC pending #120389.

[102] D. Kim, D. Mathalon, J. M. Ford, M. Mannell, J. Turner, G. Brown, A. Belger, R. L. Gollub, J.

Lauriello, C. G. Wible, D. O'Leary, K. Lim, S. Potkin, and V. D. Calhoun, "Auditory Oddball

Deficits in Schizophrenia: An Independent Component Analysis of the fMRI Multisite Function

BIRN Study," Schizophr Bull, vol. 35, pp. 67-81, 2009, PMC Journal - In Process.

[103] Y. Li, T. Adalı, W. Wang, and V. D. Calhoun, "Joint Blind Source Separation by Multi-set

Canonical Correlation Analysis," IEEE Trans. Signal Processing, vol. 57, pp. 3918-3929, 2009,


[104] J. Liu, G. D. Pearlson, A. Windemuth, G. Ruano, N. I. Perrone-Bizzozero, and V. D. Calhoun,

"Combining fMRI and SNP data to investigate connections between brain function and genetics

using parallel ICA," Hum.Brain Map., vol. 30, pp. 241-255, 2009, PMC2668960.

[105] J. Liu, K. A. Kiehl, G. D. Pearlson, N. I. Perrone-Bizzozero, and V. D. Calhoun, "Genetic

Determinants of Target and Novelty Processing," NeuroImage, vol. 46, pp. 809-816, 2009,

PMC2676714.

[106] S. Meda, V. D. Calhoun, R. Astur, B. Turner, K. Ruopp, and G. D. Pearlson, "Alcohol dose

effects on brain circuits during simulated driving: An fMRI study," Hum Brain Mapp, vol. 30, pp.

1257-1270, 2009, PMC2751645.

[107] S. Meda, M. C. Stevens, B. S. Folley, V. D. Calhoun, and G. D. Pearlson, "Evidence for

anomalous network connectivity during working memory in schizophrenia: An ICA based

analysis," PLoS ONE, vol. 4, pp. 1-11, 2009, PMC Journal - In Process.

[108] A. Michael, S. Baum, J. Fries, B. C. Ho, R. Pierson, N. C. Andreasen, and V. D. Calhoun, "A

Method to Fuse fMRI Tasks Through Spatial Correlations: Applied to Schizophrenia," Human

Brain Mapping, vol. 30, pp. 2512-2529, 2009, PMC2711995.

[109] G. D. Pearlson and V. D. Calhoun, "Convergent Approaches for Defining Functional Imaging

Endophenotypes in Schizophrenia," Frontiers in Neuroscience, vol. 3, pp. 1-11, 2009, PMC

Journal - In Process.

[110] J. M. Segall, J. T. Turner, T. Van Erp, T. White, H. J. Bockholt, R. L. Gollub, B. C. Ho, V.

Magnotta, R. Jung, R. McCarley, S. C. Schulz, J. Lauriello, V. P. Clark, J. Voyvodic, M. T. Diaz,

and V. D. Calhoun, "Voxel-based Morphometric Multi-site Collaborative Study on

Schizophrenia," Schizophr Bull, vol. 35, pp. 82-95, 2009, PMC Journal - In Process.

[111] M. Stevens, V. D. Calhoun, G. D. Pearlson, and K. A. Kiehl, "Brain network dynamics during

error commission," Hum.Brain Map., vol. 30, pp. 24-37, 2009, PMC2669663.

21


[112] M. Stevens, G. D. Pearlson, and V. D. Calhoun, "Changes in the interaction of resting-state neural

networks from adolescence to adulthood.," Human Brain Mapping, vol. 30, pp. 2356-2366, 2009,


[113] M. Stevens, P. Skudlarski, G. D. Pearlson, and V. D. Calhoun, "Age-related cognitive gains

mediated by the effects of white matter development on brain network integration," NeuroImage,

vol. 48, pp. 738-746, 2009, PMC2753497.

[114] J. Sui, T. Adalı, V. P. Clark, G. Pearlson, and V. D. Calhoun, "A Method for Accurate Group

Difference Detection by Constraining the Mixing Coefficients in an ICA Framework," Human

Brain Mapping, vol. 30, pp. 2953-2970, 2009, PMC2733923.

[115] J. Sui, T. Adalı, G. Pearlson, and V. D. Calhoun, "An ICA-based Method for the Identification of

Optimal FMRI Features and Components Using Combined Group-Discriminative Techniques,"


[116] L. Xu, K. Groth, G. Pearlson, D. Schretlen, and V. Calhoun, "Source Based Morphometry: The

Use of Independent Component Analysis to Identify Gray Matter Differences with Application to

Schizophrenia," Human Brain Mapping, vol. 30, pp. 711-724, 2009, PMC2751641.

[117] L. Xu, G. Pearlson, and V. Calhoun, "Joint Source Based Morphometry Identifies Linked Gray

and White Matter Group Differences," NeuroImage, vol. 44, pp. 777-789, 2009, PMC2669793.

[118] C. Abbott, D. I. Kim, S. Sponheim, J. R. Bustillo, and V. D. Calhoun, "Decreased Default Mode

Neural Modulation with Age in Schizophrenia," American Journal of Geriatric Psychiatry, vol.

18, pp. 897-907, 2010, PMC Pending #202225.

[119] S. Arja, Z. Feng, Z. Chen, A. Caprihan, K. A. Kiehl, T. Adalı, and V. D. Calhoun, "Changes in

fMRI Magnitude Data and Phase Data Observed in Block-Design and Event-Related Tasks,"


[120] J. Arribas, V. D. Calhoun, and T. Adalı, "Automatic Bayesian classification of healthy controls,

bipolar disorder and schizophrenia using intrinsic connectivity maps from fMRI data," IEEE

Trans Biomed Eng, vol. 57, pp. 2850-2860, 2010, PMC Pending #241486.

[121] M. Assaf, K. Jagannathan, V. D. Calhoun, L. Miller, M. C. Stevens, R. Sahl, J. G. O'Boyle, R. T.

Schultz, and G. D. Pearlson, "Abnormal functional connectivity of default mode sub-networks in

autism spectrum disorder patients," Neuroimage, vol. 53, pp. 247-256, Oct 15 2010, 3058935.

[122] H. J. Bockholt, M. Scully, W. Courtney, S. Rachakonda, A. Scott, A. Caprihan, J. Fries, R.

Kalyanam, J. Segall, R. De la Garza, S. Lane, and V. D. Calhoun, "Mining the Mind Research

Network: A Novel framework for exploring large scale, heterogeneous translational neuroscience

research data sources," Frontiers in Neuroinformatics, vol. 3, pp. 1-10, 2010, PMC Journal - In

Process.

[123] V. D. Calhoun, L. Wu, K. A. Kiehl, T. Eichele, and G. D. Pearlson, "Aberrant Processing of

Deviant Stimuli in Schizophrenia Revealed by Fusion of FMRI and EEG Data," Acta

Neuropsychiatria, vol. 22, pp. 127-138, 2010, PMC pending #184787.

[124] Z. Chen, A. Caprihan, and V. D. Calhoun, "Effect of surrounding vasculature on intravoxel

BOLD signal," Med.Phys., vol. 37, pp. 1778-1787, 2010, PMC Journal - In Process.

[125] Z. Chen and V. D. Calhoun, "Magnitude and phase behaviors of multiresolution BOLD signal

refinement " Concepts in Magnetic Resonance Part B, vol. 37b, pp. 129-145, 2010, PMC Pending

#194758.

[126] L. M. Cope, J. Schaich Borg, C. L. Harenski, W. Sinnott-Armstrong, D. Lieberman, P. K.

Nyalakanti, V. D. Calhoun, and K. A. Kiehl, "Hemispheric asymmetries during processing of

immoral stimuli," Frontiers in Evolutional Neurobiology, vol. 2, pp. 1-14, 2010, PMC

Pending#249926.

[127] N. Correa, T. Eichele, T. Adalı, Y. Li, and V. D. Calhoun, "Multi-set canonical correlation

analysis for the fusion of concurrent single trial ERP and functional MRI," NeuroImage, vol. 50,

pp. 1438-1445, 2010, PMC pending #180189.

22


[128] N. Correa, T. Adalı, Y. Li, and V. D. Calhoun, "Canonical Correlation Analysis for Data Fusion

and Group Inferences: Examining applications of medical imaging data," IEEE Signal Proc.

Magazine, vol. 27, pp. 39-50, 2010, PMC Pending #202222.

[129] E. Damaraju, J. Phillips, J. R. Lowe, R. Ohl, V. D. Calhoun, and A. Caprihan, "Resting-state

Functional Connectivity Differences in Premature Children," Frontiers in Systems Neuroscience,

vol. 4, pp. 1-13, 2010, PMC Journal - In Process.

[130] P. Das and V. D. Calhoun, "Understanding brain dynamics with independent component

analysis," Acta Neuropsychiatrica, vol. 22, pp. 255-256, Oct 2010.

[131] M. Eckert, N. Keren, D. Roberts, V. D. Calhoun, and K. Harris, "Age-related changes in

processing speed; unique contributions of cerebellar and prefrontal cortex," Frontiers in Human

Neuroscience, vol. 4, pp. 1-14, 2010, PMC Journal - In Process.

[132] S. Ehrlich, E. E. Morrow, J. L. Roffman, S. Wallace, M. Naylor, H. J. Bockholt, A. Lundquist, A.

Yendiki, B. C. Ho, T. White, D. S. Manoach, V. P. Clark, V. D. Calhoun, R. L. Gollub, and D.

Holt, "The COMT Val108/158Met Polymorphism and Medial Temporal Lobe Volumetry in

Patients with Schizophrenia and Healthy Adults," NeuroImage, vol. 53, pp. 992-1000, 2010,


[133] B. S. Folley, R. Astur, K. Jagannathan, V. D. Calhoun, and G. D. Pearlson, "Anomalous neural

circuitry function in schizophrenia during a virtual Morris water task," Arch Gen Psychiatry, vol.

49, pp. 3373-3384, 2010, PMC pending #184503.

[134] M. Havlicek, J. Jan, M. Brazdil, and V. D. Calhoun, "Dynamic Granger causality based on

Kalman filter for evaluation of functional network connectivity in fMRI data," NeuroImage, vol.

53, pp. 65-77, 2010, PMC pending #210804.

[135] K. Hugdahl and V. D. Calhoun, "An update on neurocognitive impairment in schizophrenia and

depression," Frontiers in Human Neuroscience, vol. 4, pp. 1-3, 2010.

[136] K. Jagannathan, V. D. Calhoun, J. Gelernter, M. Stevens, J. Liu, F. Bolognani, A. Windemuth, G.

Ruano, and G. D. Pearlson, "Genetic associations of brain structural networks in schizophrenia: a

preliminary study using parallel ICA," Biological Psychiatry, vol. 68, pp. 657-666, 2010, PMC

pending #211358.

[137] D. Kim, J. Sui, S. Rachakonda, T. White, D. S. Manoach, V. P. Clark, B. C. Ho, S. C. Schulz, and

V. D. Calhoun, "Identification of imaging biomarkers in schizophrenia: A coefficient-constrained

independent component analysis of the Mind multi-site schizophrenia study," Journal of

NeuroInformatics, vol. 8, pp. 213-229, 2010, PMC Pending #278802.

[138] M. Kim, E. Tura, S. Potkin, J. H. Fallon, D. S. Manoach, V. D. Calhoun, FBIRN, and J. A.

Turner, "Working memory circuitry in schizophrenia shows widespread cortical inefficiency and

compensation," Schizophr Res, vol. 117, pp. 42-51, 2010, PMC pending #184508.

[139] Q. Lin, J. Liu, Y. Zheng, H. Liang, and V. D. Calhoun, "Semi-blind Spatial ICA of fMRI Using

Spatial Constraints," Hum. Brain Map., vol. 31, pp. 1076-1088, 2010, PMC pending #164327.

[140] J. Liu, M. Morgan, K. Hutchison, and V. D. Calhoun, "A study of the influence of sex on genome

wide methylation," PLoS One, vol. 5, p. e10028, 2010, 2850313.

[141] J. Liu, K. Hutchison, M. Morgan, N. I. Perrone-Bizzozero, J. Sui, and V. D. Calhoun,

"Identification of Genetic and Epigenetic Factors Contributing to Population Structure," PLoS

ONE, vol. 5, pp. 1-8, 2010, PMC Pending #241489.

[142] M. Mannell, A. R. Franco, V. D. Calhoun, J. M. Canive, R. J. Thoma, and A. R. Mayer, "Resting

state and task-induced deactivation: A methodological comparison in patients with schizophrenia

and healthy controls," Hum Brain Mapp, vol. 31, pp. 424-437, 2010, PMC pending #132340.

[143] S. Meda, K. Jagannathan, J. Gelernter, V. D. Calhoun, J. Liu, M. Stevens, and G. D. Pearlson, "A

pilot multivariate parallel ICA study to investigate differential linkage between neural networks

and genetic profiles in schizophrenia," NeuroImage, vol. 53, pp. 1007-1015, 2010, PMC pending

#161905.

[144] A. Michael, S. Baum, T. White, O. Demirci, N. C. Andreasen, J. M. Segall, R. E. Jung, G. D.

Pearlson, V. P. Clark, R. L. Gollub, S. C. Schulz, J. Roffmann, K. O. Lim, B. C. Ho, H. J.

23


Bockholt, and V. D. Calhoun, "Does Function Follow Form?: Methods to Fuse Structural and

Functional Brain Images Show Decreased Linkage in Schizophrenia," Human Brain Mapping,

vol. 49, pp. 2626-2637, 2010, PMC pending #184511.

[145] I. Pitas, V. D. Calhoun, and K. Diamantaras, "Guest Editorial: Special Issue on Machine Learning

for Signal Processing," Journal of Signal Processing Systems, vol. 61, pp. 1-2, 2010, PMC

pending #184517.

[146] S. M. Plis, V. D. Calhoun, M. P. Weisend, and T. Lane, "MEG and fMRI fusion for nonlinear

estimation of neural and BOLD signal changes," Frontiers in Neuroinformatics, vol. 4, pp. 1-17,

2010, PMC Journal - In Process.

[147] C. I. Rzepecki, S. A. Meda, V. D. Calhoun, M. J. Jafri, R. S. Astur, and G. D. Pearlson,

"Disruptions in Functional Network Connectivity during Alcohol Intoxicated Driving,"

Alcoholism: Clinical and Experimental Research, vol. 34, pp. 479-487, 2010, PMC pending

#161788.

[148] U. Sakoglu, G. D. Pearlson, K. A. Kiehl, Y. M. Wang, A. M. Michael, and V. D. Calhoun, "A

method for evaluating dynamic functional network connectivity and task-modulation: application

to schizophrenia," MAGMA, vol. 23, pp. 351-366, Dec 2010, 2891285.

[149] P. Skudlarski, K. A. Jagannathan, K. Anderson, M. C. Stevens, V. D. Calhoun, and G. D.

Pearlson, "Brain connectivity is not only lower but also different in schizophrenia: a combined

anatomical and functional approach," Biological Psychiatry, vol. 68, pp. 61-69, 2010, PMC

Pending #193102.

[150] J. Sui, T. Adalı, G. Pearlson, H. Yang, S. Sponheim, T. White, and V. D. Calhoun, " A

CCA+ICA Based Model for Multi-Task Brain Imaging Data Fusion And Its Application to

Schizophrenia," NeuroImage, vol. 51, pp. 123-134, 2010, PMC pending #180309.

[151] L. Wu, T. Eichele, and V. D. Calhoun, "Reactivity of hemodynamic responses and functional

connectivity to different states of alpha synchrony: a concurrent EEG-fMRI study," NeuroImage,


[152] W. Xiong, T. Adalı, Y. Li, and V. D. Calhoun, "On entropy rate for the complex domain and its

application to i.i.d. sampling," IEEE Transactions on Signal Processing, vol. 58, pp. 2409-2414,

2010, PMC pending #184519.

[153] H. Yang, J. Liu, J. Sui, G. Pearlson, and V. D. Calhoun, "A Hybrid Machine Learning Method for

Fusing fMRI and Genetic Data to Classify Schizophrenia," Frontiers in Human Neuroscience,


[154] C. Abbott, M. Juarez, T. White, R. L. Gollub, G. D. Pearlson, J. Bustillo, J. Lauriello, B. Ho, H. J.

Bockholt, V. P. Clark, V. Magnotta, and V. D. Calhoun, "Antipsychotic dose and diminished

neural modulation: a multi-site fMRI study," Prog Neuropsychopharmacol Biol Psychiatry, vol.

35, pp. 473-482, Mar 30 2011, 3076294.

[155] E. A. Allen, E. B. Erhardt, E. Damaraju, W. Gruner, J. M. Segall, R. F. Silva, M. Havlicek, S.

Rachakonda, J. Fries, R. Kalyanam, A. M. Michael, A. Caprihan, J. A. Turner, T. Eichele, S.

Adelsheim, A. D. Bryan, J. Bustillo, V. P. Clark, S. W. Feldstein Ewing, F. Filbey, C. C. Ford, K.

Hutchison, R. E. Jung, K. A. Kiehl, P. Kodituwakku, Y. M. Komesu, A. R. Mayer, G. D.

Pearlson, J. P. Phillips, J. R. Sadek, M. Stevens, U. Teuscher, R. J. Thoma, and V. D. Calhoun,

"A baseline for the multivariate comparison of resting-state networks," Front Syst Neurosci, vol.

5, p. 2, 2011, 3051178.

[156] E. A. Allen, J. Liu, K. A. Kiehl, J. Gelernter, G. D. Pearlson, N. I. Perrone-Bizzozero, and V. D.

Calhoun, "Components of cross-frequency modulation in health and disease," Frontiers in

Systems Neuroscience, vol. 5, pp. 1-16, 2011, PMC Journal - In Process.

[157] B. Anderson, M. C. Stevens, S. Meda, M. Jordan, V. D. Calhoun, and G. D. Pearlson, "Functional

Imaging of Cognitive Control During Acute Alcohol Intoxication," Alcoholism: Clinical and

Experimental Research, vol. 35, pp. 156-165, 2011, PMC Pending #228121.

24


[158] A. Caprihan, C. Abbott, J. Yamamoto, G. D. Pearlson, N. Bizzozero, J. Sui, and V. D. Calhoun,

"Source-based morphometry analysis of group differences in fractional anisotropy in

schizophrenia," Brain Connectivity, vol. 1, pp. 133-145, 2011, PMC Pending #304239.

[159] E. Castro, M. Martinez-Ramon, G. L. Heileman, and V. D. Calhoun, "Characterization of groups

using composite kernels and multi-source fMRI analysis data: Application to Schizophrenia,"

NeuroImage, vol. 58, pp. 526-536, 2011, PMC Pending #313196.

[160] Z. Chen and V. D. Calhoun, "Two pitfalls of BOLD fMRI magnitude-based neuroimage analysis:

non-negativity and edge effect," Journal of Neuroscience Methods, vol. 199, pp. 363-369, 2011,

PMC Pending #299490.

[161] Z. Chen and V. D. Calhoun, "A computational multiresolution BOLD fMRI model," IEEE Trans

Biomed Eng, vol. 58, pp. 2995-2999, 2011, PMC Pending #304230.

[162] T. Eichele, S. Rachakonda, B. Brakedal, R. Eikeland, and V. D. Calhoun, "EEGIFT: group

independent component analysis for event-related EEG data," Comput Intell Neurosci, vol. 2011,

p. 129365, 2011, PMC3130967.

[163] E. B. Erhardt, S. Rachakonda, E. J. Bedrick, E. A. Allen, T. Adali, and V. D. Calhoun,

"Comparison of multi-subject ICA methods for analysis of fMRI data," Hum Brain Mapp, vol.

32, pp. 2075-2095, Dec 2011, 3117074.

[164] E. Erhardt, E. Allen, E. Damaraju, and V. D. Calhoun, "On network derivation, classification, and

visualization: a response to Habeck and Moeller," Brain Connectivity, vol. 1, pp. 1-19, 2011,

PMC Pending #304235.

[165] C. Gasparovic, E. Bedrick, A. R. Mayer, R. A. Yeo, H. Chen, E. Damaraju, V. D. Calhoun, and

R. E. Jung, "Test-Retest Reliability of Short-Echo-Time Spectroscopic Imaging of Human Brain

at 3T," Magnetic Resonance in Medicine, vol. 66, pp. 324-332, 2011, PMC Pending #264108.

[166] D. Greve, B. Mueller, T. Liu, J. Turner, J. Voyvodic, E. Yetter, M. Diaz, G. McCarthey, S.

Wallace, B. J. Roach, J. M. Ford, D. Mathalon, V. D. Calhoun, C. Wible, S. Potkin, G. Glover,

and FBIRN, "A novel method for quantifying scanner instability in fMRI," Magnetic Resonance

in Medicine, vol. 65, pp. 1053-1061, 2011, PMC pending #247443.

[167] M. Havlicek, K. Friston, J. Jan, M. Brazdil, and V. D. Calhoun, "Dynamic modeling of neuronal

responses in fMRI using cubature Kalman filtering," NeuroImage, vol. 56, pp. 2109-2128, 2011,


[168] E. Karageorgiou, S. C. Schulz, R. Gollub, N. C. Andreasen, B. C. Ho, J. Lauriello, V. D.

Calhoun, H. J. Bockholt, S. Sponheim, and A. Georgopoulos, "Neuropsychological Testing and

Structural Magnetic Resonance Imaging as Diagnostic Biomarkers Early in the Course of

Schizophrenia and Related Psychoses," NeuroInformatics, vol. 9, pp. 321-333, 2011, PMC

Pending #272182.

[169] S. Khullar, A. Michael, N. Correa, T. Adalı, S. Baum, and V. D. Calhoun, "Wavelet-based fMRI

analysis: 3-D denoising, signal separate, and validation metrics," NeuroImage, vol. 54, pp. 2867-

2884, 2011, PMC Pending #247445.

[170] S. Khullar, A. Michael, N. Cahill, K. A. Kiehl, G. Pearlson, S. A. Baum, and V. D. Calhoun,

"ICA-fNORM: Spatial normalization of fMRI data using intrinsic group-ICA networks,"

Frontiers in Systems Neuroscience, pp. 1-18, 2011, PMC Journal - In Process.

[171] H. Li, N. Correa, P. Rodriguez, V. D. Calhoun, and T. Adalı, "Application of Independent

Component Analysis with Adaptive Density Model to Complex-valued fMRI Data," IEEE Trans

Biomed Eng, vol. 58, pp. 2794-2803, 2011, PMCID pending #297947.

[172] S. Ma, N. Correa, X. Li, T. Eichele, V. D. Calhoun, and T. Adalı, "Automatic Identification of

Functional Clusters in fMRI Data using Spatial Information," IEEE Trans Biomed Eng, vol. 58,

pp. 3406-3417, 2011, PMC Pending #317706.

[173] A. Michael, M. D. King, S. Ehrlich, G. Pearlson, T. White, D. Holt, N. C. Andreasen, U. Sakoglu,

B. C. Ho, S. C. Schulz, and V. D. Calhoun, "A data-driven investigation of gray matter–function

correlations in schizophrenia during a working memory task," Frontiers in Human Neuroscience,


25


[174] J. R. Petrella, F. C. Sheldon, S. E. Prince, V. D. Calhoun, and P. M. Doraiswamy, "Default Mode

Network Connectivity in Stable versus Progressive Mild Cognitive Impairment," Neurology, vol.

76, pp. 511-517, 2011, PMC Journal - In Process.

[175] S. M. Plis, V. Potluru, V. D. Calhoun, and T. Lane, "Correlated Noise: How It Breaks NMF, And

What To Do About It," Journal of Signal Processing Systems, vol. 65, pp. 351-359, 2011,

PMC3673742.

[176] S. M. Plis, M. P. Weisend, E. Damaraju, T. Eichele, A. Mayer, V. P. Clark, T. Lane, and V. D.

Calhoun, "Effective connectivity analysis of fMRI and MEG data collected under identical

paradigms," Computers in Biology and Medicine, vol. 41, pp. 1156-1165, 2011, PMC Pending

#292265.

[177] P. Rodriguez, N. Correa, T. Eichele, V. D. Calhoun, and T. Adalı, "Quality Map Thresholding for

De-Noising of Complex-Valued fMRI Data and its Application to ICA of fMRI," Journal of

Signal Processing Systems, vol. 65, pp. 497-508, 2011, PMC pending #255551.

[178] J. Schaich Borg, W. Sinnott-Armstrong, V. D. Calhoun, and K. A. Kiehl, "Neural basis of moral

verdict and moral deliberation," Social Neuroscience, vol. 6, pp. 398-413, 2011, PMC Journal - In

Process.

[179] A. Scott, W. Courtney, D. Wood, R. de la Garza, S. Lane, M. King, R. Wang, J. Roberts, J. A.

Turner, and V. D. Calhoun, "COINS: An Innovative Informatics and Neuroimaging Tool Suite

Built for Large Heterogeneous Datasets," Front Neuroinform, vol. 5, p. 33, 2011, 3250631.

[180] B. J. Shannon, M. E. Raichle, A. Z. Snyder, D. Fair, K. L. Mills, D. Zhang, K. Bache, V. D.

Calhoun, J. T. Nigg, B. J. Nagel, A. A. Stevens, and K. A. Kiehl, "Premotor functional

connectivity predicts impulsivity in juvenile offenders " PNAS, vol. 108, pp. 11241-11245, 2011,

PMC Journal - In Process.

[181] J. Sheng, H.-W. Deng, V. D. Calhoun, and Y.-P. Wang, "Integrated Analysis of Gene Expression

and Copy Number Data Using ICA-shaving Method," IEEE/ACM Transactions on

Computational Biology and Bioinformatics, vol. 8, pp. 1568-1579, 2011, PMC pending #254353.

[182] J. M. Shoemaker, M. T. Holdsworth, C. J. Aine, V. D. Calhoun, R. De la Garza, S. Feldstein

Ewing, R. Hayak, A. R. Mayer, K. A. Kiehl, L. Petree, P. Sanjuan, A. Scott, J. Stephen, and J.

Phillips, "A practical approach to incidental findings in neuroimaging research," Neurology, vol.

77, pp. 2123-2127, 2011.

[183] J. Sui, G. D. Pearlson, T. Adalı, K. A. Kiehl, A. Caprihan, J. Liu, J. Yamamoto, and V. D.

Calhoun, "Discriminating Schizophrenia and Bipolar Disorder by Fusing FMRI and DTI in A

Multimodal CCA+Joint ICA Based Model," NeuroImage, vol. 57, pp. 839-855, 2011, PMC

Pending #297883.

[184] N. Swanson, T. Eichele, G. D. Pearlson, K. A. Kiehl, and V. D. Calhoun, "Lateral Differences in

the Default Mode Network in Healthy Controls and Schizophrenia Patients," Hum Brain Mapp,


[185] J. Turner, S. R. Lane, H. J. Bockholt, and V. D. Calhoun, "The Clinical Assessment and Remote

Administration Tablet," Frontiers in Neuroinformatics, vol. 5, pp. 1-8, 2011, PMC Journal - In

Process.

[186] T. White, V. Magnotta, H. J. Bockholt, S. Williams, R. L. Gollub, B. Mueller, B. C. Ho, R. Jung,

V. P. Clark, J. Lauriello, J. R. Bustillo, S. C. Schulz, N. C. Andreasen, V. D. Calhoun, and K. O.

Lim, "Global white matter abnormalities in schizophrenia: A multicenter diffusion tensor imaging

study," Schizophr Bull, vol. 37, pp. 222-232, 2011, PMC Journal - In Process.

[187] T. White, M. Schmidt, D. Kim, and V. D. Calhoun, "Disrupted Functional Brain Connectivity

during Verbal Working Memory in Children and Adolescents with Schizophrenia," Cereb Cortex,


[188] R. A. Yeo, S. W. Gangestad, J. Liu, V. D. Calhoun, and K. E. Hutchison, "Rare copy number

deletions predict individual variation in intelligence," PLoS ONE, vol. 6, p. e16339, 2011,

3027642.

26


[189] R. A. Yeo, S. W. Gangestad, G. Gasparovic, J. Liu, V. D. Calhoun, R. J. Thoma, R. Kalyanam,

and K. H. Hutchison, "Rare copy number deletions predict individual variation in human brain

metabolite concentrations in individuals with alcohol use disorders " Biological Psychiatry, vol.

15, pp. 537-544, 2011, PMC Pending #294619.

[190] Q. Yu, J. Sui, S. Rachakonda, H. He, G. D. Pearlson, and V. D. Calhoun, "Altered small-world

brain networks in temporal lobe in patients with schizophrenia performing an auditory oddball

task," Frontiers in Systems Neuroscience, vol. 5, pp. 1-13, 2011, PMC Journal - In Process.

[191] Q. Yu, J. Sui, S. Rachakonda, H. He, W. Gruner, G. D. Pearlson, K. A. Kiehl, and V. D. Calhoun,

"Altered topological properties of functional network connectivity in schizophrenia during resting

state: a small-world brain network study," PLoS ONE, vol. 6, pp. 1-12, 2011, PMC Journal - In

Process.

[192] C. Abbott, F. Merideth, D. Ruhl, Z. Yang, V. P. Clark, V. D. Calhoun, F. M. Hanlon, and A. R.

Mayer, "Auditory orienting and inhibition of return in schizophrenia: A functional magnetic

resonance imaging study," Progress in Neuro-Psychopharmacology & Biological Psychiatry, vol.

37, pp. 161-168, 2012, PMC Pending #346258.

[193] E. A. Allen, E. Erhardt, Y. Wei, T. Eichele, and V. D. Calhoun, "Capturing inter-subject

variability with group independent component analysis of fMRI data: a simulation study,"

NeuroImage, vol. 59, pp. 4141-4159, 2012, PMC Pending #327594.

[194] E. Allen, E. Erhardt, and V. D. Calhoun, "Data visualization in the neurosciences: overcoming the

curse of dimensionality," Neuron, vol. 74, pp. 603-608, 2012, PMC Journal - In Process.

[195] D. Boutte, V. D. Calhoun, J. Chen, A. Sabbineni, K. Hutchison, and J. Liu, "Association of

genetic copy number variations at 11 q14.2 with brain regional volume differences in an alcohol

use disorder population.," Alcohol, vol. 46, pp. 519-527, 2012, PMC Journal - In Process.

[196] V. D. Calhoun and G. D. Pearlson, "A Selective Review of Simulated Driving Studies:

Combining Naturalistic and Hybrid Paradigms, Analysis Approaches, and Future Directions,"


[197] V. D. Calhoun, J. Sui, K. A. Kiehl, J. A. Turner, E. A. Allen, and G. D. Pearlson, "Exploring the

Psychosis Functional Connectome: Aberrant Intrinsic Networks in Schizophrenia and Bipolar

Disorder," Frontiers in Neuropsychiatric Imaging and Stimulation, vol. 2, pp. 1-13, 2012,

PMC3254121.

[198] V. D. Calhoun, T. Adalı, T. Eichele, and E. Allen, "Decomposing the brain: components and

modes, networks and nodes," Trends Cogn Sci, vol. 16, pp. 255-256, 2012, PMC3773539.

[199] V. D. Calhoun and T. Adalı, "Analysis of Complex-Valued Functional Magnetic Resonance

Imaging Data: Are We Just Going Through a Phase?," Special Issue of the Bulletin of the Polish

Academy of Sciences, vol. 60, pp. 371-418, 2012, Pubmed Journal - In Process.

[200] V. D. Calhoun and T. Adali, "Multisubject independent component analysis of fMRI: a decade of

intrinsic networks, default mode, and neurodiagnostic discovery," IEEE Rev Biomed Eng, vol. 5,

pp. 60-73, 2012, PMC4433055.

[201] V. D. Calhoun and K. Hugdahl, "Cognition and neuroimaging in schizophrenia," Frontiers in

Human Neuroscience, vol. 6, pp. 1-2, 2012, PMC3465855.

[202] Z. Chen and V. D. Calhoun, "Computed inverse MRI for magnetic susceptibility map

reconstruction," Journal of Computer Assisted Tomography, vol. 36, pp. 265-274, 2012.

[203] J. Chen, V. D. Calhoun, G. D. Pearlson, S. Ehrlich, J. A. Turner, B. C. Ho, T. H. Wassink, A. M.

Michael, and J. Liu, "Multifaceted genomic risk for brain function in schizophrenia,"

Neuroimage, vol. 61, pp. 866-875, Jul 16 2012, 3376184.

[204] Z. Chen and V. D. Calhoun, "Volumetric BOLD fMRI simulation: from neurovascular coupling

to multivoxel imaging," BMC Neuroscience, vol. 12, pp. 1-13, 2012, PMC Journal - In Process.

[205] Z. Chen and V. D. Calhoun, "Computed diffusion contribution in the complex blood

oxygenation-level dependent fMRI signal," Concepts in Magnetic Resonance Part A, vol. 40A,


27


[206] V. P. Clark, B. A. Coffman, A. R. Mayer, M. P. Weisend, T. D. Lane, V. D. Calhoun, E. M.

Raybourn, C. M. Garcia, and E. M. Wassermann, "TDCS guided using fMRI significantly

accelerates learning to identify concealed objects," Neuroimage, vol. 59, pp. 117-128, Jan 2 2012,

3387543.

[207] L. M. Cope, M. Shane, J. Segall, P. K. Nyalakanti, M. C. Stevens, G. D. Pearlson, V. D. Calhoun,

and K. A. Kiehl, "Examining the effect of psychopathic traits on gray matter volume in a

community substance abuse sample," Psych.Res.Neuroimaging, vol. 204, pp. 91-100, 2012, PMC


[208] K. R. Cullen, S. Wallace, V. Magnotta, H. J. Bockholt, S. Ehrlich, R. L. Gollub, D. S. Manoach,

B. C. Ho, V. P. Clark, J. Lauriello, J. Bustillo, S. C. Schultz, N. C. Andreasen, V. D. Calhoun, K.

O. Lim, and T. J. White, "Cigarette Smoking and White Matter Microstructure in Schizophrenia,"

Psych.Res.Neuroimaging, vol. 201, pp. 152-158, 2012, PMC Pending #320492.

[209] P. Das, V. D. Calhoun, and G. S. Malhi, "Mentalizing in male schizophrenia patients is

compromised by virtue of dysfunctional connectivity between task-positive and task-negative

networks," Schizophrenia Research, vol. 140, pp. 51-58, 2012, PMC Journal - In Process.

[210] W. Du, V. D. Calhoun, H. Li, S. Ma, T. Eichele, K. A. Kiehl, G. D. Pearlson, and T. Adalı, "High

Classification Accuracy for Schizophrenia with Rest and Task fMRI Data," Frontiers in Human

Neuroscience, vol. 6, pp. 1-12, 2012, PMC3366580.

[211] B. Edwards, V. D. Calhoun, and K. A. Kiehl, "Joint ICA of ERP and fMRI during Error-

Monitoring," NeuroImage, vol. 59, pp. 1896-1903, 2012, PMC3230687.

[212] S. Ehrlich, S. Brauns, A. Yendiki, B. C. Ho, V. D. Calhoun, S. C. Schulz, R. Gollub, and S.

Sponheim, "Associations of cortical thickness and cognition in patients with schizophrenia and

healthy controls," Schizophr Bull, vol. 38, pp. 1050-1062, 2012, PMC Journal - In Process.

[213] E. Erhardt, E. Allen, Y. Wei, T. Eichele, and V. D. Calhoun, "SimTB, a simulation toolbox for

fMRI data under a model of spatiotemporal separability," NeuroImage, vol. 59, pp. 4160-4167,

2012, PMC3690331.

[214] E. Ermer, L. M. Cope, P. K. Nyalakanti, V. D. Calhoun, and K. A. Kiehl, "Aberrant Paralimbic

Gray Matter in Criminal Psychopathy," Journal of Abnormal Psychology, vol. 121, pp. 649-658,

2012.

[215] G. Glover, B. Mueller, T. Van Erp, T. Liu, D. Greve, J. Voyvodic, J. Rasmussen, J. Turner, G.

Brown, D. Keator, V. D. Calhoun, H. J. Lee, J. Ford, D. Mathalon, M. Diaz, D. O'Leary, S.

Gadde, A. Preda, C. Wible, H. Stern, G. McCarthy, and B. Ozyurt, "Function Biomedical

Informatics Research Network Recommendations for Prospective Multi-Center Functional

Neuroimaging Studies," Journal of Magnetic Resonance Imaging, vol. 36, pp. 39-54, 2012, PMC


[216] H. He, J. Sui, Q. Yu, J. A. Turner, B. C. Ho, S. Sponheim, D. S. Manoach, V. P. Clark, and V. D.

Calhoun, "Altered small-world brain networks in schizophrenia patients during working memory

performance," PLoS ONE, vol. 7, pp. 1-15, 2012, PMC Journal - In Process.

[217] O. Jeromine, M. Pattichis, and V. D. Calhoun, "Optimal compressed sensing reconstructions of

fMRI using deterministic and stochastic sampling geometries," BioMedical Engineering OnLine

vol. 11, 2012, PMC Journal - In Progress.

[218] R. C. Kluetsch, C. Schmahl, I. Niedtfeld, M. Densmore, V. D. Calhoun, J. Daniels, A. Kraus, M.

Bohus, and R. Lanius, "Alterations in default mode network connectivity during pain processing

in borderline personality disorder," Archives of General Psychiatry, vol. 69, pp. 993-1002, 2012,

PMC Journal: In Process.

[219] Y. Li, T. Adalı, T. Eichele, and V. D. Calhoun, "Group study of simulated driving fMRI data by

multiset canonical correlation analysis," IEEE Journal of Signal Proc Sys, vol. 68, pp. 31-48,

2012, PMC3673747.

[220] J. Liu, M. Ghassemi, A. Michael, D. Boutte, W. Wells, N. I. Perrone-Bizzozero, F. Macciardi, D.

Mathalon, J. Ford, S. Potkin, J. Turner, FBIRN, and V. D. Calhoun, "An ICA with reference

28


approach in identification of genetic variation and associated brain networks," Frontiers in

Human Neuroscience, vol. 6, pp. 1-10, 2012, PMC Journal: In Process.

[221] J. Liu, A. Ulloa, N. Perrone-Bizzozero, R. A. Yeo, J. Chen, and V. D. Calhoun, "A Pilot Study on

Collective Effects of 22q13.31 Deletions on Gray Matter Concentration in Schizophrenia," PLoS

ONE, vol. 7, pp. 1-9, 2012, PMC Journal - In Process.

[222] L. Luo, L. Xu, R. Jung, G. D. Pearlson, T. Adalı, and V. D. Calhoun, "Constrained Source Based

Morphometry Identifies Structural Networks Associated with Default Mode Network," Brain

Connectivity, vol. 2, pp. 33-43, 2012, PMC3621809.

[223] S. Ma, T. Eichele, V. D. Calhoun, W. Du, and T. Adalı, "Modulations of functional connectivity

in healthy and schizophrenia groups during task and rest," NeuroImage, vol. 62, pp. 1694-1704,


[224] S. Meda, B. Narayanan, J. Liu, N. I. Perrone-Bizzozero, M. Stevens, V. D. Calhoun, D. C. Glahn,

L. Shen, S. L. Risacher, A. J. Sayking, and G. D. Pearlson, "A large scale multivariate parallel

ICA method reveals novel imaging-genetic relationships for Alzheimer's Disease in the ADNI

cohort," NeuroImage, vol. 60, pp. 1608-1621, 2012, Pubmed Journal - In Process.

[225] S. Meda, A. Gill, M. C. Stevens, R. P. Lorenzoni, D. C. Glahn, V. D. Calhoun, J. A. Sweeney, C.

A. Tamminga, M. Keshavan, G. Thaker, and G. G. Pearlson, "Differences in resting-state fMRI

functional network connectivity between schizophrenia and psychotic bipolar probands and their

unaffected first-degree relatives," Biological Psychiatry, vol. 71, pp. 881-889, 2012, PMC

Journal: In Process.

[226] T. Meier, J. Wildenberg, J. Liu, J. Chen, V. D. Calhoun, B. Biswal, E. Meyerand, R. M. Birn, and

V. Prabhakaran, "Parallel ICA identifies sub-components of resting state networks that covary

with behavioral indices " Frontiers in Human Neuroscience, vol. 6, pp. 1-14, 2012, PMB Journal -

In Process.

[227] K. B. Nooner, S. Colcombe, L. Maayan, R. Tobe, M. Mennes, M. Benedict, A. Moreno, L.

Panek, S. Zavitz, Q. Li, S. Sikka, D. Gutman, S. Bangaru, S. A. Brown, R. Schlachter, S. Kamiel,

A. Anwar, C. Hinz, M. Kaplan, A. Rachlin, S. Adelsberg, B. Cheung, R. Khanuja, C. Yan, R. C.

Craddock, V. D. Calhoun, W. Courtney, M. D. King, D. Wood, A. Scott, C. Cox, C. Kelly, A. Di

Martino, B. Biswal, B. Coffey, M. J. Hoptman, D. Javitt, N. Pomara, J. Sidtic, H. Koplewicz, F.

X. Castellanos, B. L. Leventhal, and M. P. Milham, "The NKI-Rockland Sample: A Model for

Accelerating the Pace of Discovery Science in Psychiatry," Frontiers in Brain Imaging Methods,


[228] P. Rodriguez, V. D. Calhoun, and T. Adalı, "Phase Ambiguity Correction and Visualization

Techniques for Complex-Valued ICA of Group fMRI Data," Pattern Recognition, vol. 45, pp.

2050-2063, 2012, PMC3280613.

[229] T. Ros, J. Theberge, P. A. Frewen, R. Kleutsch, M. Densmore, V. Calhoun, and R. A. Lanius,

"Mind over chatter: plastic up-regulation of the fMRI salience network directly after EEG

neurofeedback," NeuroImage, vol. 15, pp. 324-335, 2012, PMC Journal - In Process.

[230] J. Segall, E. A. Allen, R. E. Jung, E. Erhardt, S. Arja, K. A. Kiehl, and V. D. Calhoun,

"Correspondence between Structure and Function in the Human Brain at Rest," Frontiers in

Neuroinformatics, vol. 6, 2012, PMC3313067.

[231] J. L. Shaffer, J. R. Petrella, F. C. Sheldon, K. R. Choudhury, V. D. Calhoun, R. E. Coleman, and

P. M. Doraiswamy, "Predicting Cognitive Decline in Subjects at Risk for Alzheimer Disease by

Using Combined Cerebrospinal Fluid, MR Imaging, and PET Biomarkers," Neuroradiology, vol.

266, pp. 583-591, 2012, PMC3558874.

[232] G. Sugranyes, M. Kyriakopoulos, D. Dima, J. O'Muircheartaigh, G. Pendelbury, V. D. Calhoun,

and S. Frangou, "Multimodal analyses identify linked functional and white matter abnormalities

within the working memory network in schizophrenia," Schizophrenia Research, vol. 138, pp.

136-142, 2012, PMC Journal - In Process.

29


[233] J. Sui, T. Adalı, Q. Yu, and V. D. Calhoun, "A Review of Multivariate Methods for Multimodal

Fusion of Brain Imaging Data," Journal of Neuroscience Methods, vol. 204, pp. 68-81, 2012,

PMC3690333.

[234] D. F. Tolin, M. C. Stevens, A. L. Villavicencio, M. M. Norberg, V. D. Calhoun, R. O. Frost, G.

Steketee, S. L. Rauch, and G. D. Pearlson, "Neural Mechanisms of Decision-Making in Hoarding

Disorder," Archives of General Psychiatry, vol. 69, pp. 832-841, 2012, PMC Pending #336967.

[235] J. Turner, H. Chen, D. Mathalon, E. Allen, A. Mayer, C. Abbott, V. D. Calhoun, and J. Bustillo,

"Reliability of the amplitude of low-frequency fluctuations in resting state in chronic

schizophrenia," Psych.Res.Neuroimaging, vol. 201, pp. 253-255, 2012, PMC Pending #326593.

[236] J. Turner, V. D. Calhoun, A. Michael, T. Van Erp, S. Ehrlich, J. Segall, R. Gollub, J. Csernansky,

S. Potkin, B. Ho, J. Bustillo, S. Schulz, FBIRN, and L. Wang, "Heritability of multivariate gray

matter measures in schizophrenia," Twin Res Hum Genet, vol. 15, pp. 324-335, 2012.

[237] W. Xiong, N. Correa, T. Adalı, and V. D. Calhoun, "Order Selection of the Linear Mixing Model

for Complex-valued fMRI Data," Journal of Signal Processing Systems, vol. 67, pp. 117-128,

2012, PMC Pending #225466.

[238] L. Xu, T. Adalı, D. Schretlen, G. D. Pearlson, and V. D. Calhoun, "Structural Angle and Power

Images Reveal Interrelated Gray and White Matter Abnormalities in Schizophrenia," Neurology

Research International, vol. 2012, pp. 1-18, 2012, PMC3191744.

[239] Q. Yu, S. M. Plis, E. Erhardt, E. A. Allen, J. Sui, K. A. Kiehl, G. D. Pearlson, and V. D. Calhoun,

"Modular organization of functional network connectivity in healthy controls and patients with

schizophrenia during the resting state," Frontiers in Systems Neuroscience, vol. 5, pp. 1-16, 2012,

PMC3257855.

[240] Q. Yu, E. A. Allen, J. Sui, P. Fusar-Poli, M. Arbabshirani, G. D. Pearlson, and V. D. Calhoun,

"Brain connectivity networks in schizophrenia underlying resting state functional magnetic

resonance imaging," Current Topics in Medicinal Chemistry, special issue on "Neurochemistry of

schizophrenia and psychosis: the contribution of neuroimaging", vol. 12, pp. 2415-2425, 2012,


[241] C. Abbott, N. Lemke, S. Gopal, R. J. Thoma, J. Bustillo, V. D. Calhoun, and J. A. Turner,

"Electroconvulsive therapy response in major depressive disorder: a pilot functional network

connectivity resting state fMRI investigation," Frontiers in Neuropsychiatric Imaging and

Stimulation, vol. 3, pp. 4-10, 2013, PMC3585433.

[242] T. Adalı, Z. J. Wang, V. D. Calhoun, T. Eichele, M. J. McKeown, and D. Van De Ville, "Guest

Editorial for Special Section on Multimodal Biomedical Imaging: Algorithms and Applications,"

IEEE Transaction on Multimedia, vol. 15, 2013, PMC Journal - In Process.

[243] E. Aharoni, G. M. Vincent, C. L. Harenski, V. D. Calhoun, W. Sinnott-Armstrong, M. S.

Gazzaniga, and K. A. Kiehl, "Neuro-prediction of future rearrest," Proceedings of the National

Academy of Sciences of the United States of America, vol. 110, pp. 6223-6228, 2013, PMC


[244] M. Arbabshirani, M. Havlicek, K. A. Kiehl, G. D. Pearlson, and V. D. Calhoun, "Functional

network connectivity during rest and task conditions: A comparative study," Human Brain

Mapping, vol. 34, pp. 2959-2971, 2013, PMC3524389.

[245] M. Arbabshirani, K. A. Kiehl, G. Pearlson, and V. D. Calhoun, "Classification of schizophrenia

patients based on resting-state functional network connectivity " Frontiers in Brain Imaging

Methods, vol. 7, pp. 1-16, 2013, 23966903.

[246] J. H. Balsters, I. H. Robertson, and V. D. Calhoun, "BOLD frequency power indexes working

memory performance," Frontiers in Human Neuroscience, vol. 7, pp. 1-16, 2013, PMC3655325.

[247] S. Brauns, R. Gollub, E. Walton, J. Hass, M. N. Smolka, T. White, T. Wassink, V. D. Calhoun,

and S. Ehrlich, "Genetic variation in GAD1 is associated with cortical thickness in the

parahippocampal gyrus," Journal of Psychiatric Research, vol. 47, pp. 872-879, 2013, PMC


30


[248] D. A. Bridwell, L. Wu, T. Eichele, and V. D. Calhoun, "The spatiospectral characterization of

brain networks: fusing concurrent EEG spectra and fMRI maps," NeuroImage, vol. 69, pp. 101-

111, 2013, PMC3568990.

[249] V. D. Calhoun, V. Potluru, R. Phlypo, R. Silva, B. Pearlmutter, A. Caprihan, S. M. Plis, and T.

Adalı, "Correction: Independent component analysis for brain fMRI does indeed select for

maximal independence," PLoS ONE, vol. 8, 2013, PMC3812296.

[250] V. D. Calhoun, "Brain connectivity: an opening window into addiction," American Journal of

Drug and Alcohol Abuse, vol. 39, pp. 343-344, Nov 2013, PMC Journal - In Process.


Adalı, "Independent component analysis for brain fMRI does indeed select for maximal

independence," PLoS ONE, vol. 8, 2013, PMC3757003.

[252] V. D. Calhoun and E. Allen, "Extracting intrinsic functional networks with feature-based group

independent component analysis," Psychometrika, vol. 78, pp. 243-259, Apr 2013, PMC Journal -

In Process.

[253] Z. Chen and V. D. Calhoun, "Blood oxygenation level-dependent functional MRI signal

turbulence caused by ultrahigh spatial resolution: numerical simulation and theoretical

explanation," NMR Biomed, vol. 26, pp. 248-264, 2013, PMC Journal - In Process.

[254] Z. Chen and V. D. Calhoun, "Effect of object orientation angle on reconstructed magnetic

susceptibility: numerical simulations," Magnetic Resonance Insights, vol. 6, pp. 23-31, 2013,


[255] Z. Chen, J. Liu, and V. D. calhoun, "Susceptibility-based functional mapping by 3D

deconvolution of MR-phase activation maps," Journal of Neuroscience Methods, vol. 216, pp. 33-

42, 2013, PMC Journal - In Process.

[256] J. Chen, V. D. Calhoun, G. D. Pearlson, N. Perrone-Bizzozero, J. Sui, J. A. Turner, J. R. Bustillo,

S. Ehrlich, S. R. Sponheim, J. M. Canive, B. C. Ho, and J. Liu, "Guided exploration of genomic

risk for gray matter abnormalities in schizophrenia using parallel independent component analysis

with reference," Neuroimage, vol. 83, pp. 384-396, Dec 2013, 3797233.

[257] Z. Chen and V. D. Calhoun, "Understanding the morphological mismatch between magnetic

susceptibility source and T2* image," Magnetic Resonance Insights, vol. 6, pp. 65-81, 2013,


[258] A. G. Christodoulou, T. E. Bauer, K. A. Kiehl, S. Feldstein Ewing, A. D. Bryan, and V. D.

Calhoun, "A Quality Control Method for Detecting and Suppressing Uncorrected Residual

Motion in fMRI Studies," Magnetic Resonance Imaging, vol. 31, pp. 707-717, 2013,

PMC3648631.

[259] P. Das, C. Coulston, D. Bargh, M. Tanious, K. L. Phan, V. D. Calhoun, and G. S. Malhi, "Neural

Antecedents of Emotional Disorders: An fMRI Study of Subsyndromal Emotional Symptoms in

Adolescent Girls " Biological Psychiatry, vol. 74, pp. 265-272, 2013, PMC Journal - In Process.

[260] N. Driesen, G. McCarthy, Z. Bhagwager, M. Bloch, V. D. Calhoun, D. C. D'Souza, R.

Gueorguieva, G. He, R. Ramachandran, R. F. Suckow, A. Anticevic, P. T. Morgan, and J.

Krystal, "Relationship of Resting Brain Hyperconnectivity and Schizophrenia-like Symptoms

Produced by the NMDA receptor Antagonist Ketamine in Humans," Molecular Psychiatry, vol.

18, pp. 1199-1204, 2013, PMC3646075.

[261] N. Driesen, G. McCarthy, Z. Bhagwager, M. Bloch, V. D. Calhoun, D. C. D'Souza, R.

Gueorguieva, G. He, H. Leung, R. Ramani, R. F. Suckow, A. Anticevic, P. T. Morgan, and J. H.

Krystal, "The Impact of NMDA Receptor Blockade on Human Working Memory-Related

Prefrontal Function and Connectivity," Neuropsychopharmacology, vol. 38, pp. 2613-2622, 2013,

PMC3828532.

[262] E. Ermer, V. D. Calhoun, and K. A. Kiehl, "Aberrant Paralimbic Gray Matter in Incarcerated

Male Adolescents with psychpathic traits," Journal of the American Academy of Child and

Adolescent Psychiatry, vol. 52, pp. 94-103, 2013.

31


[263] A. R. Franco, M. Mannell, V. D. Calhoun, and A. Mayer, "Impact of Analysis Methods on the

Reproducibility and Reliability of Resting State Networks," Brain Connectivity, vol. 3, pp. 363-

374, 2013, PMC3749744.

[264] S. Fryer, S. W. Woods, K. A. Kiehl, V. D. Calhoun, G. D. Pearlson, B. J. Roach, J. M. Ford, V.

H. Srihari, T. McGlashan, and D. Mathalon, "Deficient suppression of default mode regions

during working memory in individuals with early psychosis and at clinical high-risk for

psychosis," Frontiers in Schizophrenia, vol. 4, 2013, PMC3768116.

[265] R. L. Gollub, J. M. Shoemaker, M. D. King, T. White, S. Ehrlich, S. R. Sponheim, V. P. Clark, J.

A. Turner, B. A. Mueller, V. Magnotta, D. O'Leary, B. C. Ho, S. Brauns, D. S. Manoach, L.

Seidman, J. R. Bustillo, J. Lauriello, J. Bockholt, K. O. Lim, B. R. Rosen, S. C. Schulz, V. D.

Calhoun, and N. C. Andreasen, "The MCIC collection: a shared repository of multi-modal, multi-

site brain image data from a clinical investigation of schizophrenia," Neuroinformatics, vol. 11,

pp. 367-388, Jul 2013, 3727653.

[266] R. M. Hutchison, T. Womelsdorf, E. A. Allen, P. Bandettini, V. D. Calhoun, M. Corbetta, S. D.

Penna, J. Duyn, G. Glover, J. Gonzalez-Castillo, D. A. Handwerker, S. D. Keilholz, V.

Kiviniemi, D. A. Leopold, F. de Pasquale, O. Sporns, M. Walter, and C. Chang, "Dynamic

functional connectivity: promises, issues, and interpretations," NeuroImage, vol. 80, pp. 360-378,

2013, PMC3807588.

[267] S. Jamadar, N. Powers, S. Meda, V. D. Calhoun, J. Gelernter, J. R. Gruen, and G. Pearlson,

"Genetic Influences of Resting State fMRI Activity in Language-Related Brain Regions in

Healthy Controls and Schizophrenia Patients: A Pilot Study," Brain Imaging and Behavior, vol. 7,

pp. 15-27, 2013.

[268] M. Juarez, K. A. Kiehl, and V. D. Calhoun, "Intrinsic limbic and paralimbic networks are

associated with criminal psychopathy," Hum Brain Mapp, vol. 34, pp. 1921-1930, 2013, PMC

Journal - In Processs.

[269] R. Kalyanam, D. Boutte, C. Gasparovic, K. E. Hutchison, and V. D. Calhoun, "Group

independent component analysis of MR spectra," Brain Imaging and Behavior, vol. 3, pp. 229-

242, 2013, PMC3683283.

[270] S. Khadka, S. Meda, M. Stevens, D. C. Glahn, V. D. Calhoun, J. A. Sweeney, C. A. Tamminga,

M. S. Keshavan, K. O'Neil, D. Schretlen, and G. D. Pearlson, "Is abberrant functional

connectivity an psychosis endophenotype? a resting state functional magnetic resonance imaging

study," Biological Psychiatry, vol. 74, pp. 458-466, 2013, PMC Journal - In Process.

[271] D. Lin, J. Zhang, J. Li, V. D. Calhoun, H.-W. Deng, and Y. Wang, "Group Sparse Canonical

Correlation Analysis for Genomic Data Integration," BMC Bioinformatics, vol. 14, pp. 1-16,


[272] J. Liu, V. D. Calhoun, J. Chen, E. Claus, and K. E. Hutchison, "Effect of homozygous deletions at

22q13.1 on alcohol dependence severity and cue-elicited BOLD response in the precuneus,"

Addiction Biology, vol. 18, pp. 548-558, 2013, PMC pending #321831.

[273] G. S. Malhi, M. Tanious, F. K., D. Bargh, C. Coulston, K. L. Phan, V. D. Calhoun, and P. Das,

"Differential engagement of the fronto-limbic network during emotion processing distinguishes

bipolar and borderline personality disorder," Molecular Psychiatry, vol. 12, pp. 1247-1248, 2013,


[274] C. Roth, N. Cota, S. M. Plis, E. Damaraju, S. Khullar, V. D. Calhoun, and D. Bridwell, "The

Influence of Visuospatial Attention on Unattended Auditory 40 Hz Responses " Frontiers in

Human Neuroscience, vol. 7, 2013, PMC3711011.

[275] N. Soldati, V. D. Calhoun, L. Bruzzone, and J. Jovicich, "ICA analysis of fMRI with real-time

constraints: an evaluation of fast detection performance as function of algorithms, parameters and

a priori conditions " Frontiers in Human Neuroscience, vol. 7, pp. 1-11, 2013, PMC Journal - In

Process.

32


[276] N. Soldati, V. D. Calhoun, L. Bruzzone, and J. Jovicich, "The use of a priori information in ICA-

based techniques for real-time fMRI: an evaluation of static/dynamic and spatial/temporal

characteristics," Frontiers in Human Neuroscience, vol. 7, 2013, PMC Journal - In Process.

[277] V. Steele, A. Aharon, G. Munro, V. D. Calhoun, P. K. Nyalakanti, M. C. Stevens, G. D. Pearlson,

and K. A. Kiehl, "A Large Scale (N=102) Functional Neuroimaging Study of Response Inhibition

and Error-Processing in a Go/NoGo Task," Behavioral Brain Research, vol. 256, pp. 529-536,


[278] J. Stephen, B. Coffman, R. Jung, J. Bustillo, C. J. Aine, and V. D. Calhoun, "Using joint ICA to

link function and structure using MEG and DTI in schizophrenia," NeuroImage, vol. 83, pp. 418-

430, 2013, PMC3815989.

[279] F. Stingo, M. Guindani, M. Vannucci, and V. D. Calhoun, "An Integrative Bayesian Modeling

Approach to Imaging Genetics," Journal of the American Statistical Association, vol. 108, 2013,


[280] J. Sui, Q. Yu, H. He, and V. D. Calhoun, "A Selective Review of Multimodal Fusion Methods in

Schizophrenia," Frontiers in Human Neuroscience, vol. 6, 2013, PMC3285795.

[281] J. Sui, H. He, G. D. Pearlson, T. Adali, K. A. Kiehl, Q. Yu, V. P. Clark, E. Castro, T. White, B.

A. Mueller, B. C. Ho, N. C. Andreasen, and V. D. Calhoun, "Three-way (N-way) fusion of brain

imaging data based on mCCA+jICA and its application to discriminating schizophrenia,"

Neuroimage, vol. 66, pp. 119-132, Feb 1 2013, 3897558.

[282] J. Sui, H. He, Q. Yu, J. Chen, J. T. Rogers, G. D. Pearlson, A. R. Mayer, J. Bustillo, J. Canive,

and V. D. Calhoun, "Combination of Resting state fMRI, DTI and sMRI Data to Discriminate

Schizophrenia by N-way MCCA+jICA," Frontiers in Human Neuroscience, vol. 7, 2013,

PMC3666029.

[283] J. Turner, E. Damaraju, T. Van Erp, D. Mathalon, J. M. Ford, J. Voyvodic, B. Mueller, A. Belger,

J. Bustillo, S. C. McEwen, S. G. Potkin, F. I. BIRN, and V. D. Calhoun, "A multi-site resting

state fMRI study on the amplitude of low frequency fluctuations in schizophrenia " Frontiers in

Brain Imaging Methods, vol. 7, 2013, PMC373747.

[284] A. Vakhtin, V. D. Calhoun, R. E. Jung, J. L. Prestopnik, P. A. Taylor, and C. C. Ford, "Changes

in Intrinsic Functional Brain Networks Following Blast-Induced Mild Traumatic Brain Injury,"

Brain Injury, vol. 27, pp. 1304-1310, 2013, PMC Journal - In Process.

[285] E. Walton, J. Turner, R. L. Gollub, D. S. Manoach, A. Yendiki, B. C. Ho, S. Sponheim, V. D.

Calhoun, and S. Ehrlich, "Cumulative genetic risk and prefrontal activity in patients with

schizophrenia," Schizophr Bull, vol. 39, pp. 703-711, 2013, PMC Journal - In Process.

[286] E. Walton, D. Geisler, J. Hass, J. Liu, J. Turner, A. Yendiki, A. Smolka, B. C. Ho, D. S.

Manoach, R. L. Gollub, V. Roessner, V. D. Calhoun, and S. Ehrlich, "The Impact of Genome-

Wide Supported Schizophrenia Risk Variants in the Neurogranin Gene on Brain Structure and

Function," PLoS One, vol. 8, 2013, PMC Journal - In Process.

[287] T. White, H. J. Bockholt, S. Ehrlich, B. C. Ho, D. S. Manoach, V. P. Clark, R. Gollub, V. D.

Calhoun, S. C. Schulz, N. C. Andreasen, K. O. Lim, and V. A. Magnotta, "Spatial Characteristics

of White Matter Abnormalities in Schizophrenia," Schizophr Bull, vol. 39, pp. 1077-1086, 2013,

PMC3756779.

[288] P. D. Worhunsky, M. C. Stevens, K. M. Carroll, B. J. Rounsaville, V. D. Calhoun, G. D.

Pearlson, and M. N. Potenza, "Functional Brain Networks Associated With Cognitive Control,

Cocaine Dependence, and Treatment Outcome," Psychol Addict Behav, vol. 27, pp. 477-468,

2013, Pubmed Journal: In Process.

[289] C. Wright, J. A. Turner, V. D. Calhoun, and N. Bizzozero, "Potential impact of miR-137 and its

targets in schizophrenia " Frontiers in Behavioral and Psychiatric Genetics, vol. 4, 2013, PMC


[290] J. Xu, S. Zhang, V. D. Calhoun, J. Monterosso, C.-S. Li, P. D. Worhunsky, M. Stevens, G. D.

Pearlson, and M. N. Potenza, "Task-related concurrent but opposite modulations of overlapping

33


functional networks as revealed by spatial ICA," NeuroImage, vol. 79, pp. 62-71, 2013,

PMC3677796.

[291] J. Xu, V. D. Calhoun, and M. N. Potenza, "Spatial ICA reveals functional activity hidden from

traditional fMRI GLM-based analyses " Frontiers in Brain Imaging Methods, vol. 7, 2013,

PMC3753718.

[292] R. A. Yeo, R. J. Thoma, C. Gasparovic, M. Monig, N. Harlaar, V. D. Calhoun, R. Kalyanam, and

K. E. Hutchison, "Neurometabolite concentration and clinical features of alcohol use disorders: A

proton magnetic resonance spectroscopy study," Psych.Res.Neuroimaging, vol. 211, pp. 141-147,


[293] R. A. Yeo, S. W. Gangestad, J. Liu, R. J. Thoma, J. Pommy, A. R. Mayer, S. Schulz, S. Ehrlich,

T. Wassink, E. E. Morrow, and V. D. Calhoun, "The impact of copy number deletions on general

cognitive ability and ventricle size in patients with schizophrenia and healthy controls,"

Biological Psychiatry, vol. 73, pp. 540-545, 2013, PMC Journal - In Process.

[294] Q. Yu, J. Sui, J. Liu, S. M. Plis, K. A. Kiehl, G. D. Pearlson, and V. D. Calhoun, "Disrupted

correlation between low frequency power and connectivity strength of resting state brain

networks in schizophrenia," Schizophrenia Research, vol. 143, pp. 165-171, 2013, PMC3540119.

[295] Q. Yu, J. Sui, K. A. Kiehl, G. Pearlson, and V. D. Calhoun, "State-related functional integration

and functional segregation brain networks in schizophrenia," Schizophrenia Research, vol. 150,

pp. 450-458, 2013, PMC3839349.

[296] C. Abbott, T. Jones, N. T. Lemke, P. Gallegos, S. McClintock, A. R. Mayer, J. Bustillo, and V.

D. Calhoun, "Hippocampal structural and functional changes associated with electroconvulsive

therapy response," Translational Psychiatry, vol. 4, 2014, PMC Journal - In Process.

[297] E. Aharoni, J. Mallet, G. M. Vincent, C. L. Harenski, V. D. Calhoun, W. Sinnott-Armstrong, M.

S. Gazzaniga, and K. A. Kiehl, "Predictive accuracy in the neuroprediction of rearrest," Social

Neuroscience, vol. 9, pp. 332-336, 2014, PMC Journal - In Process.

[298] E. Allen, E. Damaraju, S. M. Plis, E. Erhardt, T. Eichele, and V. D. Calhoun, "Tracking whole-

brain connectivity dynamics in the resting state," Cereb Cortex, vol. 24, pp. 663-676, 2014,

PMC3920766.

[299] M. R. Arbabshirani, E. Damaraju, R. Phlypo, S. Plis, E. Allen, S. Ma, D. Mathalon, A. Preda, J.

G. Vaidya, T. Adali, and V. D. Calhoun, "Impact of autocorrelation on functional connectivity,"

Neuroimage, vol. 102 Pt 2, pp. 294-308, Nov 15 2014, 4253536.

[300] D. A. Bridwell, K. A. Kiehl, G. D. Pearlson, and V. D. Calhoun, "Patients with schizophrenia

demonstrate reduced cortical sensitivity to auditory oddball regularities," Schizophrenia

Research, vol. 158, pp. 189-194, Sep 2014, PMC Journal - In Process.

[301] V. D. Calhoun, "Brain Networks: The Next Steps, Comment on: “Understanding brain networks

and brain organization” by Luiz Pessoa," Physics of Life Reviews, vol. 11, pp. 440-441, 2014,


[302] V. D. Calhoun, R. Miller, G. Pearlson, and T. Adali, "The chronnectome: time-varying

connectivity networks as the next frontier in fMRI data discovery," Neuron, vol. 84, pp. 262-274,

Oct 22 2014, PMC4372723.

[303] H. B. Cao, J. B. Duan, D. D. Lin, Y. Y. Shugart, V. Calhoun, and Y. P. Wang, "Sparse

representation based biomarker selection for schizophrenia with integrated analysis of fMRI and

SNPs," Neuroimage, vol. 102, pp. 220-228, Nov 15 2014, PMC Journal - In Process.

[304] E. Castro, V. Gomez-Verdejo, M. Martinez-Ramon, K. A. Kiehl, and V. D. Calhoun, "A multiple

kernel learning approach to perform classification of groups from complex-valued fMRI data

analysis: application to schizophrenia," NeuroImage, vol. 87, pp. 1-17, 2014, PMC3946896.

[305] M. S. Cetin, F. Christensen, C. C. Abbott, J. M. Stephen, A. R. Mayer, J. M. Canive, J. R.

Bustillo, G. D. Pearlson, and V. D. Calhoun, "Thalamus and posterior temporal lobe show greater

inter-network connectivity at rest and across sensory paradigms in schizophrenia," Neuroimage,

vol. 97, pp. 117-126, Aug 15 2014, 4087193.

34


[306] Z. Chen and V. Calhoun, "Reconstructing brain magnetic susceptibility distributions from T2*

phase images by TV-regularized 2-subproblem split Bregman iterations," Reports in Medical

Imaging, p. 41, 2014, PMC Journal - In Process.

[307] J. Chen, V. D. Calhoun, J. A. Turner, A. Arias-Vasquez, M. P. Zwiers, and J. Liu, "Exploration of

Scanning Effects in Multi-site Structural MRI Studies Journal of Neuroscience Methods," Journal

of Neuroscience Methods, pp. 37-50, 2014, PMC Journal - In Process.

[308] Z. Chen and V. D. Calhoun, "Intrinsic functional brain mapping in reconstructed 4D magnetic

susceptibility (<chi>) data space," Journal of Neuroscience Methods, vol. 241C, pp. 85-93, 2014,


[309] V. P. Clark, G. K. Beatty, R. E. Anderson, P. Kodituwakku, J. Phillips, T. Lane, K. A. Kiehl, and

V. D. Calhoun, "Reduced fMRI activity predicts relapse in patients recovering from stimulant

dependence," Human Brain Mapping, vol. 35, pp. 414-428, 2014, PMC Journal - In Process.

[310] L. M. Cope, E. Ermer, P. K. Nyalakanti, V. D. Calhoun, and K. A. Kiehl, "Paralimbic Gray

Matter Reductions in Incarcerated Adolescent Females with Psychopathic Traits," Journal of

Abnormal Child Psychology, vol. 42, pp. 659-668, May 2014, PMC Journal - In Process.

[311] L. M. Cope, G. M. Vincent, J. L. Jobelius, P. K. Nyalakanti, V. D. Calhoun, and K. A. Kiehl,

"Psychopathic traits modulate brain responses to drug cues in incarcerated offenders," Frontiers

in Human Neuroscience, vol. 8, Feb 24 2014, PMC Journal - In Process.

[312] L. M. Cope, E. Ermer, L. M. Gaudet, V. R. Steele, A. L. Eckhardt, M. R. Arbabshirani, M. F.

Caldwell, V. D. Calhoun, and K. A. Kiehl, "Abnormal brain structure in youth who commit

homicide," Neuroimage-Clinical, vol. 4, pp. 800-807, 2014, PMC Journal - In Process.

[313] E. Damaraju, A. Caprihan, J. R. Lowe, E. A. Allen, V. D. Calhoun, and J. P. Phillips, "Functional

connectivity in the developing brain: A longitudinal study from 4 to 9 months of age,"

NeuroImage, vol. 84, pp. 169-180, 2014, PMC Journal - In Process.

[314] E. Damaraju, E. A. Allen, A. Belger, J. M. Ford, S. McEwen, D. H. Mathalon, B. A. Mueller, G.

D. Pearlson, S. G. Potkin, A. Preda, J. A. Turner, J. G. Vaidya, T. G. van Erp, and V. D. Calhoun,

"Dynamic functional connectivity analysis reveals transient states of dysconnectivity in

schizophrenia," Neuroimage Clin, vol. 5, pp. 298-308, 2014, 4141977.

[315] F. M. Filbey, S. Aslan, V. D. Calhoun, J. S. Spence, E. Damaraju, A. Caprihan, and J. Segall,

"Long-term effects of marijuana use on the brain," Proceedings of the National Academy of

Sciences of the United States of America, vol. 111, pp. 16913-16918, Nov 25 2014, PMC Journal

- In Process.

[316] A. Hahamy-Dubossarsky, V. D. Calhoun, G. Pearlson, M. Harel, N. Stern, and F. Attar, "Save the

global: global signal connectivity as a tool for studying clinical populations with fMRI," Journal

of Molecular Neuroscience, vol. 53, pp. S59-S60, Aug 2014, PMC Journal - In Process.

[317] F. G. Hillary, S. M. Rajtmajer, C. A. Roman, J. D. Medaglia, J. E. Slocomb-Dluzen, V. D.

Calhoun, D. C. Good, and G. R. Wylie, "The rich get richer: brain injury elicits hyperconnectivity

in core subnetworks," PLoS One, vol. 9, p. e104021, 2014, 4133194.

[318] R. D. Hjelm, V. D. Calhoun, R. Salakhutdinov, E. A. Allen, T. Adali, and S. M. Plis, "Restricted

Boltzmann machines for neuroimaging: an application in identifying intrinsic networks,"

Neuroimage, vol. 96, pp. 245-260, Aug 1 2014, PMC4348021.

[319] R. J. Huster, S. M. Plis, C. F. Lavallee, V. D. Calhoun, and C. S. Herrmann, "Functional and

effective connectivity of stopping," Neuroimage, vol. 94, pp. 120-128, Jul 1 2014, PMC Journal -

In Process.

[320] M. D. King, D. Wood, B. Miller, R. Kelly, D. Landis, W. Courtney, R. Wang, J. A. Turner, and

V. D. Calhoun, "Automated collection of imaging and phenotypic data to centralized and

distributed data repositories," Front Neuroinform, vol. 8, p. 60, 2014, 4046572.

[321] R. C. Kluetsch, T. Ros, J. Theberge, P. A. Frewen, V. D. Calhoun, C. Schmahl, and R. Lanius,

"Plastic modulation of PTSD resting-state networks and subjective wellbeing by EEG

neurofeedback," Acta Psychiatrica Scandinavica, vol. 130, pp. 123-136, 2014, PMC Journal - In

Process.

35


[322] D. Lin, V. D. Calhoun, and Y. P. Wang, "Correspondence between fMRI and SNP data by group

sparse canonical correlation analysis," Medical Image Analysis, vol. 18, pp. 891-902, Aug 2014,


[323] D. D. Lin, H. B. Cao, V. D. Calhoun, and Y. P. Wang, "Sparse models for correlative and

integrative analysis of imaging and genetic data," Journal of Neuroscience Methods, vol. 237, pp.

69-78, Nov 30 2014, PMC Journal - In Press.

[324] J. Liu and V. D. Calhoun, "A review of multivariate analyses in imaging genetics," Front

Neuroinform, vol. 8, p. 29, 2014, 3972473.

[325] J. Y. Liu, E. D. Claus, V. D. Calhoun, and K. E. Hutchison, "Brain Regions Affected by Impaired

Control Modulate Responses to Alcohol and Smoking Cues," Journal of Studies on Alcohol and

Drugs, vol. 75, pp. 808-816, Sep 2014, PMC Journal - In Process.

[326] S. Ma, V. D. Calhoun, R. Phlypo, and T. Adalı, "Dynamic changes of spatial functional network

connectivity in healthy individuals and schizophrenia patients using independent vector

analysis.," NeuroImage, vol. 90, 2014, PMC Journal - In Process.

[327] S. Meda, G. Ruano, A. Windemuth, K. O'Neil, C. Berwise, S. Dunn, L. Boccaccio, B. Narayanan,

M. Kocherla, E. Sprooten, M. Keshavan, C. Tamminga, J. Sweeney, B. A. Clementz, V. D.

Calhoun, and G. D. Pearlson, "Multivariate analysis reveals genetic associations of the resting

default mode network in psychotic bipolar disorder and schizophrenia," PNAS, vol. 111, pp.


[328] A. M. Michael, M. Anderson, R. L. Miller, T. Adali, and V. D. Calhoun, "Preserving subject

variability in group fMRI analysis: performance evaluation of GICA vs. IVA," Front Syst

Neurosci, vol. 8, p. 106, 2014, PMC4071815.

[329] M. A. Monnig, R. E. Thayer, A. Caprihan, E. D. Claus, R. A. Yeo, V. D. Calhoun, and K. E.

Hutchison, "White matter integrity is associated with alcohol cue reactivity in heavy drinkers,"

Brain and Behavior, vol. 4, pp. 158-170, Mar 2014, PMC Journal - In Process.

[330] J. Mounce, L. Luo, A. Caprihan, J. Y. Liu, N. I. Perrone-Bizzozero, and V. D. Calhoun,

"Association of GRM3 polymorphism with white matter integrity in schizophrenia,"

Schizophrenia Research, vol. 155, pp. 8-14, May 2014, PMC Journal - In Process.

[331] B. Narayanan, K. O'Neil, C. Berwise, M. C. Stevens, V. D. Calhoun, B. A. Clementz, C.

Tamminga, J. A. Sweeney, M. S. Keshavan, and G. D. Pearlson, "Resting Electroencephalogram

Oscillatory Abnormalities in Schizophrenia, Psychotic Bipolar Patients and their Relatives from

the B-SNIP Study," Biological Psychiatry, vol. 76, pp. 456-465, 2014, PMC Journal - In Process.

[332] S. M. Plis, J. Sui, T. Lane, S. Roy, V. P. Clark, V. K. Potluru, R. J. Huster, A. Michael, S. R.

Sponheim, M. P. Weisend, and V. D. Calhoun, "High-order interactions observed in multi-task

intrinsic networks are dominant indicators of aberrant brain function in schizophrenia,"

Neuroimage, vol. 102, pp. 35-48, Nov 15 2014, PMC3896503.

[333] S. M. Plis, D. R. Hjelm, R. Salakhutdinov, E. A. Allen, H. J. Bockholt, J. D. Long, H. J. Johnson,

J. S. Paulsen, J. A. Turner, and V. D. Calhoun, "Deep learning for neuroimaging: a validation

study," Front Neurosci, vol. 8, p. 229, Aug 20 2014, 4138493.

[334] B. Rashid, E. Damaraju, G. D. Pearlson, and V. D. Calhoun, "Dynamic connectivity states

estimated from resting fMRI Identify differences among Schizophrenia, bipolar disorder, and

healthy control subjects," Front Hum Neurosci, vol. 8, p. 897, Nov 7 2014, 4224100.

[335] A. D. Sarwate, S. M. Plis, J. A. Turner, M. R. Arbabshirani, and V. D. Calhoun, "Sharing

privacy-sensitive access to neuroimaging and genetics data: a review and preliminary validation,"

Front Neuroinform, vol. 8, p. 35, 2014, 3985022.

[336] C. Schneider, T. White, J. Hass, D. Geisler, S. R. Wallace, V. Roessner, D. J. Holt, V. D.

Calhoun, R. L. Gollub, and S. Ehrlich, "Smoking status as a potential confounder in the study of

brain structure in schizophrenia," Journal of Psychiatric Research, vol. 50, pp. 84-91, 2014,

PMC4047795.

36


[337] R. F. Silva, S. M. Plis, T. Adali, and V. D. Calhoun, "A statistically motivated framework for

simulation of stochastic data fusion models applied to multimodal neuroimaging," Neuroimage,

vol. 102 Pt 1, pp. 92-117, Nov 15 2014, PMC Journal - In Process.

[338] V. Sochat, K. Supekar, J. Bustillo, V. Calhoun, J. A. Turner, and D. L. Rubin, "A Robust

Classifier to Distinguish Noise from fMRI Independent Components," Plos One, vol. 9, Apr 18


[339] V. R. Steele, B. C. Fink, J. M. Maurer, M. R. Arbabshirani, C. H. Wilber, A. J. Jaffe, A. Sidz, G.

D. Pearlson, V. D. Calhoun, V. P. Clark, and K. A. Kiehl, "Brain Potentials Measured During a

Go/NoGo Task Predict Completion of Substance Abuse Treatment," Biological Psychiatry, vol.

76, pp. 75-83, Jul 1 2014, PMC Journal - In Process.

[340] V. Steele, E. Claus, E. Aharoni, C. L. Harenski, V. D. Calhoun, G. D. Pearlson, and K. A. Kiehl,

"A Large Scale (N=102) Functional Neuroimaging Study of Error processing in a Go/NoGo

Task," Behavioral Brain Research, vol. 268, pp. 127-138, 2014, PMC Journal - In Process.

[341] J. Sui, R. Huster, Q. B. Yu, J. M. Segall, and V. D. Calhoun, "Function-structure associations of

the brain: Evidence from multimodal connectivity and covariance studies," Neuroimage, vol. 102,

pp. 11-23, Nov 15 2014, PMC3969780.

[342] P. M. Thompson, J. L. Stein, S. E. Medland, D. P. Hibar, A. A. Vasquez, M. E. Renteria, R. Toro,

N. Jahanshad, G. Schumann, B. Franke, M. J. Wright, N. G. Martin, I. Agartz, M. Alda, S.

Alhusaini, L. Almasy, J. Almeida, K. Alpert, N. C. Andreasen, O. A. Andreassen, L. G.

Apostolova, K. Appel, N. J. Armstrong, B. Aribisala, M. E. Bastin, M. Bauer, C. E. Bearden, O.

Bergmann, E. B. Binder, J. Blangero, H. J. Bockholt, E. Boen, C. Bois, D. I. Boomsma, T. Booth,

I. J. Bowman, J. Bralten, R. M. Brouwer, H. G. Brunner, D. G. Brohawn, R. L. Buckner, J.

Buitelaar, K. Bulayeva, J. R. Bustillo, V. D. Calhoun, D. M. Cannon, R. M. Cantor, M. A.

Carless, X. Caseras, G. L. Cavalleri, M. M. Chakravarty, K. D. Chang, C. R. K. Ching, A.

Christoforou, S. Cichon, V. P. Clark, P. Conrod, G. Coppola, B. Crespo-Facorro, J. E. Curran, M.

Czisch, I. J. Deary, E. J. C. de Geus, A. den Braber, G. Delvecchio, C. Depondt, L. de Haan, G. I.

de Zubicaray, D. Dima, R. Dimitrova, S. Djurovic, H. W. Dong, G. Donohoe, R. Duggirala, T. D.

Dyer, S. Ehrlich, C. J. Ekman, T. Elvsashagen, L. Emsell, S. Erk, T. Espeseth, J. Fagerness, S.

Fears, I. Fedko, G. Fernandez, S. E. Fisher, T. Foroud, P. T. Fox, C. Francks, S. Frangou, E. M.

Frey, T. Frodl, V. Frouin, H. Garavan, S. Giddaluru, D. C. Glahn, B. Godlewska, R. Z. Goldstein,

R. L. Gollub, H. J. Grabe, O. Grimm, O. Gruber, T. Guadalupe, R. E. Gur, R. C. Gur, H. Goring,

S. Hagenaars, T. Hajek, G. B. Hall, J. Hall, J. Hardy, C. A. Hartman, J. Hass, S. N. Hatton, U. K.

Haukvik, K. Hegenscheid, A. Heinz, I. B. Hickie, B. C. Ho, D. Hoehn, P. J. Hoekstra, M.

Hollinshead, A. J. Holmes, G. Homuth, M. Hoogman, L. E. Hong, N. Hosten, J. J. Hottenga, H.

E. H. Pol, K. S. Hwang, C. R. Jack, M. Jenkinson, C. Johnston, E. Jonsson, R. Kahn, D.

Kasperaviciute, S. Kelly, S. Kim, P. Kochunov, L. Koenders, B. Kramer, J. B. J. Kwok, J.

Lagopoulos, G. Laje, M. Landen, B. A. Landman, J. Lauriello, S. M. Lawrie, P. H. Lee, S. Le

Hellard, H. Lemaitre, C. D. Leonardo, C. S. Li, B. Liberg, D. C. Liewald, X. M. Liu, L. M.

Lopez, E. Loth, A. Lourdusamy, M. Luciano, F. Macciardi, M. W. J. Machielsen, G. M.

MacQueen, U. F. Malt, R. Mandl, D. S. Manoach, J. L. Martinot, M. Matarin, K. A. Mather, M.

Mattheisen, M. Mattingsdal, A. Meyer-Lindenberg, C. McDonald, A. M. McIntosh, F. J.

McMahon, K. L. McMahon, E. Meisenzahl, I. Melle, Y. Milaneschi, S. Mohnke, G. W.

Montgomery, D. W. Morris, E. K. Moses, B. A. Mueller, S. Munoz Maniega, T. Muhleisen, B.

Muller-Myhsok, B. Mwangi, M. Nauck, K. Nho, T. E. Nichols, L. G. Nilsson, A. C. Nugent, L.

Nyberg, R. L. Olvera, J. Oosterlaan, R. A. Ophoff, M. Pandolfo, M. Papalampropoulou-Tsiridou,

M. Papmeyer, T. Paus, Z. Pausova, G. D. Pearlson, B. W. Penninx, C. P. Peterson, A. Pfennig, M.

Phillips, G. B. Pike, J. B. Poline, S. G. Potkin, B. Putz, A. Ramasamy, J. Rasmussen, M.

Rietschel, M. Rijpkema, S. L. Risacher, J. L. Roffman, R. Roiz-Santianez, N. Romanczuk-

Seiferth, E. J. Rose, N. A. Royle, D. Rujescu, M. Ryten, P. S. Sachdev, A. Salami, T. D.

Satterthwaite, J. Savitz, A. J. Saykin, C. Scanlon, L. Schmaal, H. G. Schnack, A. J. Schork, S. C.

Schulz, R. Schur, L. Seidman, L. Shen, J. M. Shoemaker, A. Simmons, S. M. Sisodiya, C. Smith,

37


J. W. Smoller, J. C. Soares, S. R. Sponheim, E. Sprooten, J. M. Starr, V. M. Steen, S. Strakowski,

L. Strike, J. Sussmann, P. G. Samann, A. Teumer, A. W. Toga, D. Tordesillas-Gutierrez, D.

Trabzuni, S. Trost, J. Turner, M. Van den Heuvel, N. J. Van der Wee, K. van Eijk, T. G. M. van

Erp, N. E. M. van Haren, D. Van 't Ent, M. J. van Tol, M. C. V. Hernandez, D. J. Veltman, A.

Versace, H. Volzke, R. Walker, H. Walter, L. Wang, J. M. Wardlaw, M. E. Weale, M. W.

Weiner, W. Wen, L. T. Westlye, H. C. Whalley, C. D. Whelan, T. White, A. M. Winkler, K.

Wittfeld, G. Woldehawariat, C. Wolf, D. Zilles, M. P. Zwiers, A. Thalamuthu, P. R. Schofield, N.

B. Freimer, N. S. Lawrence, W. Drevets, A. s. D. Neuroimaging, E. Consortium, I. Consortium

and S. Y. S. S. Grp, "The ENIGMA Consortium: large-scale collaborative analyses of

neuroimaging and genetic data," Brain Imaging and Behavior, vol. 8, pp. 153-182, Jun 2014,


[343] A. E. Ulloa, J. Y. Chen, V. M. Vergara, V. Calhoun, and J. Y. Liu, "Association Between Copy

Number Variation Losses and Alcohol Dependence Across African American and European

American Ethnic Groups," Alcoholism-Clinical and Experimental Research, vol. 38, pp. 1266-

1274, May 2014, PMC Journal - In Process.

[344] G. E. van den Bosch, H. El Marroun, M. N. Schmidt, D. Tibboel, D. S. Manoach, V. D. Calhoun,

and T. J. White, "Brain connectivity during verbal working memory in children and adolescents,"

Hum Brain Mapp, vol. 35, pp. 698-711, Feb 2014, 4435694.

[345] T. Van Erp, I. Guella, M. P. Vawter, J. Turner, G. Brown, G. McCarthy, D. Greve, G. Glover, V.

D. Calhoun, K. O. Lim, J. Bustillo, A. Belger, J. M. Ford, D. Mathalon, M. Diaz, A. Preda, D. D.

Nguyen, F. Macciardi, and S. Potkin, "Schizophrenia miR-137 Locus Risk Genotype is

Associated with DLPFC Hyperactivation," Biological Psychiatry, vol. 75, pp. 398-405, 2014,


[346] V. M. Vergara, A. Ulloa, V. D. Calhoun, D. Boutte, J. Chen, and J. Liu, "A three-way parallel

ICA approach to analyze links among genetics, brain structure and brain function," Neuroimage,

vol. 98, pp. 386-394, Sep 2014, 4141686.

[347] E. Walton, D. Geisler, P. H. Lee, J. Hass, J. A. Turner, J. Liu, S. R. Sponheim, T. White, T. H.

Wassink, V. Roessner, R. L. Gollub, V. D. Calhoun, and S. Ehrlich, "Prefrontal Inefficiency Is

Associated With Polygenic Risk for Schizophrenia," Schizophrenia Bulletin, vol. 40, pp. 1263-

1271, Nov 2014, PMC Journal - In Process.

[348] E. Walton, J. Y. Liu, J. Hass, T. White, M. Scholz, V. Roessner, R. Gollub, V. D. Calhoun, and S.

Ehrlich, "MB-COMT promoter DNA methylation is associated with working-memory processing

in schizophrenia patients and healthy controls," Epigenetics, vol. 9, pp. 1101-1107, Aug 2014,


[349] B. Weiland, A. Sabbineni, V. D. Calhoun, R. C. Welsh, A. Bryan, and K. E. Hutchison, "Reduced

Left Executive Control Network Functional Connectivity Is Associated with Alcohol Use

Disorders," Alcoholism: Clinical and Experimental Research, vol. 38, pp. 2445-2453, 2014, PMC


[350] D. Wood, M. King, D. Landis, W. Courtney, R. Wang, R. Kelly, J. A. Turner, and V. D. Calhoun,

"Harnessing modern web application technology to create intuitive and efficient data

visualization and sharing tools," Front Neuroinform, vol. 8, p. 71, 2014, 4144441.

[351] J. Xu, V. D. Calhoun, G. Pearlson, and M. N. Potenza, "Opposite Modulation of Brain Functional

Networks Implicated at Low vs. High Demand of Attention and Working Memory," PLoS ONE,

vol. 9, 2014, PMC3909055.

[352] R. A. Yeo, S. W. Gangestad, E. Walton, S. Ehrlich, J. Pommy, J. A. Turner, J. Y. Liu, A. R.

Mayer, S. C. Schulz, B. C. Ho, J. R. Bustillo, T. H. Wassink, S. R. Sponheim, E. M. Morrow, and

V. D. Calhoun, "Genetic influences on cognitive endophenotypes in schizophrenia,"

Schizophrenia Research, vol. 156, pp. 71-75, Jun 2014, PMC Journal - In Process.

[353] X. N. Zuo, J. S. Anderson, P. Bellec, R. M. Birn, B. B. Biswal, J. Blautzik, J. C. Breitner, R. L.

Buckner, V. D. Calhoun, F. X. Castellanos, A. Chen, B. Chen, J. Chen, X. Chen, S. J. Colcombe,

W. Courtney, R. C. Craddock, A. Di Martino, H. M. Dong, X. Fu, Q. Gong, K. J. Gorgolewski,

38


Y. Han, Y. He, Y. He, E. Ho, A. Holmes, X. H. Hou, J. Huckins, T. Jiang, Y. Jiang, W. Kelley,

C. Kelly, M. King, S. M. LaConte, J. E. Lainhart, X. Lei, H. J. Li, K. Li, K. Li, Q. Lin, D. Liu, J.

Liu, X. Liu, Y. Liu, G. Lu, J. Lu, B. Luna, J. Luo, D. Lurie, Y. Mao, D. S. Margulies, A. R.

Mayer, T. Meindl, M. E. Meyerand, W. Nan, J. A. Nielsen, D. O'Connor, D. Paulsen, V.

Prabhakaran, Z. Qi, J. Qiu, C. Shao, Z. Shehzad, W. Tang, A. Villringer, H. Wang, K. Wang, D.

Wei, G. X. Wei, X. C. Weng, X. Wu, T. Xu, N. Yang, Z. Yang, Y. F. Zang, L. Zhang, Q. Zhang,

Z. Zhang, Z. Zhang, K. Zhao, Z. Zhen, Y. Zhou, X. T. Zhu, and M. P. Milham, "An open science

resource for establishing reliability and reproducibility in functional connectomics," Sci Data,

vol. 1, p. 140049, 2014, PMC4421932.

[354] P. P. Acharjee, R. Phlypo, L. Wu, V. D. Calhoun, and T. Adali, "Independent Vector Analysis for

Gradient Artifact Removal in Concurrent EEG-fMRI Data," Ieee Transactions on Biomedical

Engineering, vol. 62, pp. 1750-1758, Jul 2015, PMC Journal - In Process.

[355] T. Adali, Y. Levin-Schwartz, and V. D. Calhoun, "Multimodal Data Fusion Using Source

Separation: Application to Medical Imaging," Proceedings of the IEEE, vol. 103, pp. 1494-1506,

2015, PMC Journal - in process.

[356] T. Adali, Y. Levin-Schwartz, and V. D. Calhoun, "Multi-modal data fusion using source

separation: Two effective models based on ICA and IVA and their properties," Proc IEEE Inst

Electr Electron Eng, vol. 103, pp. 1478-1493, Sep 01 2015, PMC4624202.

[357] O. Agcoaglu, R. Miller, A. Mayer, K. Hugdahl, and V. D. Calhoun, "Lateralization of Resting

State Networks and Relationship to Age and Gender," NeuroImage, pp. 310-325, 2015, PMC


[358] J. A. Bernard, D. R. Leopold, V. D. Calhoun, and V. A. Mittal, "Regional Cerebellar Volume and

Cognitive Function From Adolescence to Late Middle Age," Human Brain Mapping, vol. 36, pp.

1102-1120, Mar 2015, PMC Journal - In Process.

[359] E. Bilek, M. Ruf, A. Schafer, C. Akdeniz, V. D. Calhoun, C. Schmahl, C. Demanuele, H. Tost, P.

Kirsch, and A. Meyer-Lindenberg, "Information flow between interacting human brains:

Identification, validation, and relationship to social expertise," Proceedings of the National

Academy of Sciences of the United States of America, vol. 112, pp. 5207-5212, Apr 21 2015,


[360] D. A. Bridwell, V. R. Steele, J. M. Maurer, K. A. Kiehl, and V. D. Calhoun, "The relationship

between somatic and cognitive-affective depression symptoms and error-related ERPs," J Affect

Disord, vol. 172, pp. 89-95, Feb 01 2015, PMC4394023.

[361] D. A. Bridwell, C. Roth, C. N. Gupta, and V. D. Calhoun, "Cortical Response Similarities Predict

which Audiovisual Clips Individuals Viewed, but Are Unrelated to Clip Preference," Plos One,

vol. 10, Jun 1 2015, PMC Journal - In Process.

[362] V. D. Calhoun, "A spectrum of sharing: maximization of information content for brain imaging

data," Gigascience, vol. 4, Jan 29 2015, PMC Journal - In Process.

[363] V. D. Calhoun, R. F. Silva, T. Adali, and S. Rachakonda, "Comparison of PCA approaches for

very large group ICA," Neuroimage, vol. 118, pp. 662-666, Sep 2015, PMC4554805.

[364] M. S. Cetin, S. Khullar, E. Damaraju, A. M. Michael, S. A. Baum, and V. D. Calhoun, "Enhanced

disease characterization through multi network functional normalization in fMRI," Frontiers in

Neuroscience, vol. 9, Mar 31 2015, PMC Journal - In Process.

[365] Z. Chen and V. Calhoun, "Nonlinear magnitude and linear phase behaviors of T2* imaging:

theoretical approximation and Monte Carlo simulation," Magn Reson Imaging, vol. 33, pp. 390-

400, May 2015, PMC Journal - In Process.

[366] J. Chen, K. E. Hutchison, V. D. Calhoun, E. D. Claus, J. A. Turner, J. Sui, and J. Liu, "CREB-

BDNF pathway influences alcohol cue-elicited activation in drinkers," Hum Brain Mapp, vol. 36,

pp. 3007-3019, Aug 2015, PMC4969622.

[367] J. Y. Chen, V. D. Calhoun, A. Arias-Vasquez, M. P. Zwiers, K. van Hulzen, G. Fernandez, S. E.

Fisher, B. Franke, J. A. Turner, and J. Y. Liu, "G-protein genomic association with normal

39


variation in gray matter density," Human Brain Mapping, vol. 36, pp. 4272-4286, Nov 2015,


[368] Y. Du, G. Pearlson, J. Liu, J. Sui, Q. Yu, E. Castro, and V. D. Calhoun, "A group ICA based

framework for evaluating resting fMRI markers when disease categories are unclear: application

to schizophrenia, bipolar, and schizoaffective disorders," NeuroImage, vol. 122, pp. 272-280,


[369] J. M. Ford, V. A. Palzes, B. J. Roach, S. G. Potkin, T. G. M. van Erp, J. A. Turner, B. A. Mueller,

V. D. Calhoun, J. Voyvodic, A. Belger, J. Bustillo, J. G. Vaidya, A. Preda, S. C. McEwen, D. H.

Mathalon, and F. I. Biomed, "Visual Hallucinations Are Associated With Hyperconnectivity

Between the Amygdala and Visual Cortex in People With a Diagnosis of Schizophrenia,"

Schizophrenia Bulletin, vol. 41, pp. 223-232, Jan 2015, PMD Journal - In Process.

[370] S. L. Fryer, B. J. Roach, J. M. Ford, J. A. Turner, T. G. M. van Erp, J. Voyvodic, A. Preda, A.

Belger, J. Bustillo, D. O'Leary, B. A. Mueller, K. O. Lim, S. C. McEwen, V. D. Calhoun, M.

Diaz, G. Glover, D. Greve, C. G. Wible, J. Vaidya, S. G. Potkin, and D. H. Mathalon, "Relating

Intrinsic Low-Frequency BOLD Cortical Oscillations to Cognition in Schizophrenia,"

Neuropsychopharmacology, vol. 40, pp. 2705-2714, Nov 2015, PMC Journal - In Process.

[371] D. Geisler, E. Walton, M. Naylor, V. Roessner, K. O. Lim, S. C. Schulz, R. L. Gollub, V. D.

Calhoun, S. R. Sponheim, and S. Ehrlich, "Brain structure and function correlates of cognitive

subtypes in schizophrenia," Psychiatry Research-Neuroimaging, vol. 234, pp. 74-83, Oct 30


[372] C. N. Gupta, V. D. Calhoun, S. Rachakonda, J. Chen, V. Patel, J. Liu, J. Segall, B. Franke, M. P.

Zwiers, A. Arias-Vasquez, J. K. Buitelaar, S. E. Fisher, G. Fernandez, T. Van Erp, S. Potkin, J.

Ford, D. Mathalon, S. C. McEwen, H. J. Lee, B. Mueller, D. Greve, O. A. Andreassen, I. Agartz,

R. Gollub, S. Sponheim, S. Ehrlich, L. Wang, G. Pearlson, D. C. Glahn, E. Sprooten, A. R.

Mayer, J. Stephen, R. E. Jung, J. Canive, J. Bustillo, and J. Turner, "Patterns of gray matter

abnormalities in schizophrenia based on an international mega-analysis," Schizophr Bull, vol. 41,


[373] C. N. Gupta, J. Y. Chen, J. Y. Liu, E. Damaraju, C. Wright, N. L. Perrone-Bizzozero, G.

Pearlson, L. Luo, A. M. Michael, J. A. Turner, and V. D. Calhoun, "Genetic markers of white

matter integrity in schizophrenia revealed by parallel ICA," Frontiers in Human Neuroscience,

vol. 9, Mar 3 2015, PMC Journal - In Process.

[374] J. Hass, E. Walton, C. Wright, A. Beyer, M. Scholz, J. Turner, J. Y. Liu, M. N. Smolka, V.

Roessner, S. R. Sponheim, R. L. Gollub, V. D. Calhoun, and S. Ehrlich, "Associations between

DNA methylation and schizophrenia-related intermediate phenotypes - A gene set enrichment

analysis," Progress in Neuro-Psychopharmacology & Biological Psychiatry, vol. 59, pp. 31-39,

Jun 3 2015, PMC Journal - In Process.

[375] J. Hass, E. Walton, H. Kirsten, J. Turner, R. Wolthusen, V. Roessner, S. R. Sponheim, D. Holt, R.

Gollub, V. D. Calhoun, and S. Ehrlich, "Complexin2 modulates working memory-related neural

activity in patients with schizophrenia," Eur Arch Psychiatry Clin Neurosci, vol. 265, pp. 137-

145, Mar 2015, 4342303.

[376] D. P. Hibar, J. L. Stein, M. E. Renteria, A. Arias-Vasquez, S. Desrivieres, N. Jahanshad, R. Toro,

K. Wittfeld, L. Abramovic, M. Andersson, B. S. Aribisala, N. J. Armstrong, M. Bernard, M. M.

Bohlken, M. P. Boks, J. Bralten, A. A. Brown, M. M. Chakravarty, Q. Chen, C. R. K. Ching, G.

Cuellar-Partida, A. den Braber, S. Giddaluru, A. L. Goldman, O. Grimm, T. Guadalupe, J. Hass,

G. Woldehawariat, A. J. Holmes, M. Hoogman, D. Janowitz, T. Y. Jia, S. Kim, M. Klein, B.

Kraemer, P. H. Lee, L. M. O. Loohuis, M. Luciano, C. Macare, K. A. Mather, M. Mattheisen, Y.

Milaneschi, K. Nho, M. Papmeyer, A. Ramasamy, S. L. Risacher, R. Roiz-Santianez, E. J. Rose,

A. Salami, P. G. Samann, L. Schmaal, A. J. Schork, J. Shin, L. T. Strike, A. Teumer, M. M. J.

van Donkelaar, K. R. van Eijk, R. K. Walters, L. T. Westlye, C. D. Whelan, A. M. Winkler, M. P.

Zwiers, S. Alhusaini, L. Athanasiu, S. Ehrlich, M. M. H. Hakobjan, C. B. Hartberg, U. K.

Haukvik, A. J. G. A. M. Heister, D. Hoehn, D. Kasperaviciute, D. C. M. Liewald, L. M. Lopez,

40


R. R. R. Makkinje, M. Matarin, M. A. M. Naber, D. R. Mckay, M. Needham, A. C. Nugent, B.

Putz, N. A. Royle, L. Shen, E. Sprooten, D. Trabzuni, S. S. L. van der Marel, K. J. E. van Hulzen,

E. Walton, C. Wolf, L. Almasy, D. Ames, S. Arepalli, A. A. Assareh, M. E. Bastin, H. Brodaty,

K. B. Bulayeva, M. A. Carless, S. Cichon, A. Corvin, J. E. Curran, M. Czisch, G. I. de Zubicaray,

A. Dillman, R. Duggirala, T. D. Dyer, S. Erk, I. O. Fedko, L. Ferrucci, T. M. Foroud, P. T. Fox,

M. Fukunaga, J. R. Gibbs, H. H. H. Goring, R. C. Green, S. Guelfi, N. K. Hansell, C. A.

Hartman, K. Hegenscheid, A. Heinz, D. G. Hernandez, D. J. Heslenfeld, P. J. Hoekstra, F.

Holsboer, G. Homuth, J. J. Hottenga, M. Ikeda, C. R. Jack, M. Jenkinson, R. Johnson, R. Kanai,

M. Keil, J. W. Kent, P. Kochunov, J. B. Kwok, S. M. Lawrie, X. M. Liu, D. L. Longo, K. L.

McMahon, E. Meisenzah, I. Melle, S. Mahnke, G. W. Montgomery, J. C. Mostert, T. W.

Muhleisen, M. A. Nalls, T. E. Nichols, L. G. Nilsson, M. M. Nothen, K. Ohi, R. L. Olvera, R.

Perez-Iglesias, G. B. Pike, S. G. Potkin, I. Reinvang, S. Reppermund, M. Rietschel, N.

Romanczuk-Seiferth, G. D. Rosen, D. Rujescu, K. Schnell, P. R. Schofield, C. Smith, V. M.

Steen, J. E. Sussmann, A. Thalamuthu, A. W. Toga, B. J. Traynor, J. Troncoso, J. A. Turner, M.

C. V. Hernandez, D. van't Ent, M. van der Brug, N. J. A. van der Wee, M. J. van Tol, D. J.

Veltman, T. H. Wassink, E. Westman, R. H. Zielke, A. B. Zonderman, D. G. Ashbrook, R.

Hager, L. Lu, F. J. McMahon, D. W. Morris, R. W. Williams, H. G. Brunner, R. L. Buckner, J. K.

Buitelaar, W. Cahn, V. D. Calhoun, G. L. Cavalleri, B. Crespo-Facorro, A. M. Dale, G. E.

Davies, N. Delanty, C. Depondt, S. Djurovic, W. C. Drevets, T. Espeseth, R. L. Gollub, B. C. Ho,

W. Hoffman, N. Hosten, R. S. Kahn, S. Le Hellard, A. Meyer-Lindenberg, B. Muller-Myhsok, M.

Nauck, L. Nyberg, M. Pandolfo, B. W. J. H. Penninx, J. L. Roffman, S. M. Sisodiya, J. W.

Smoller, H. van Bokhoven, N. E. M. van Haren, H. Volzke, H. Walter, M. W. Weiner, W. Wen,

T. White, I. Agartz, O. A. Andreassen, J. Blangero, D. I. Boomsma, R. M. Brouwer, D. M.

Cannon, M. R. Cookson, E. J. C. de Geus, I. J. Deary, G. Donohoe, G. Fernandez, S. E. Fisher, C.

Francks, D. C. Glahn, H. J. Grabe, O. Gruber, J. Hardy, R. Hashimoto, H. E. H. Pol, E. G.

Jonsson, I. Kloszewska, S. Lovestone, V. S. Mattay, P. Mecocci, C. McDonald, A. M. McIntosh,

R. A. Ophoff, T. Paus, Z. Pausova, M. Ryten, P. S. Sachdev, A. J. Saykin, A. Simmons, A.

Singleton, H. Soininen, J. M. Wardlaw, M. E. Weale, D. R. Weinberger, H. H. H. Adams, L. J.

Launer, S. Seiler, R. Schmidt, G. Chauhan, C. L. Satizabal, J. T. Becker, L. Yanek, S. J. van der

Lee, M. Ebling, B. Fischl, W. T. Longstreth, D. Greve, H. Schmidt, P. Nyquist, L. N. Vinke, C.

M. van Duijn, L. T. Xue, B. Mazoyer, J. C. Bis, V. Gudnason, S. Seshadri, M. A. Ikram, N. G.

Martin, M. J. Wright, G. Schumann, B. Franke, P. M. Thompson, S. E. Medland, A. D.

Neuroimaging, C. Consortium, EPIGEN, IMAGEN and SYS, "Common genetic variants

influence human subcortical brain structures," Nature, vol. 520, pp. 224-U216, Apr 9 2015, PMC


[377] M. A. Hunter, B. A. Coffman, C. Gasparovic, V. D. Calhoun, M. C. Trumbo, and V. P. Clark,

"Baseline effects of transcranial direct current stimulation on glutamatergic neurotransmission

and large-scale network connectivity," Brain Research, vol. 1594, pp. 92-107, Jan 12 2015, PMC


[378] R. J. Huster, S. M. Plis, and V. D. Calhoun, "Group-level component analyses of EEG: validation

and evaluation," Frontiers in Neuroscience, vol. 9, Jul 29 2015, PMC Journal - In Process.

[379] C. J. Hyatt, V. D. Calhoun, G. D. Pearlson, and M. Assaf, "Specific default mode subnetworks

support mentalizing as revealed through opposing network recruitment by social and semantic

FMRI tasks," Hum Brain Mapp, vol. 36, pp. 3047-3063, Aug 2015, PMC Journal - In Process.

[380] N. F. Jie, M. H. Zhu, X. Y. Ma, E. A. Osuch, M. Wammes, J. Theberge, H. D. Li, Y. Zhang, T. Z.

Jiang, J. Sui, and V. D. Calhoun, "Discriminating Bipolar Disorder From Major Depression

Based on SVM-FoBa: Efficient Feature Selection With Multimodal Brain Imaging Data," IEEE

Trans Auton Ment Dev, vol. 7, pp. 320-331, Dec 2015, PMC4743532.

[381] N. F. Jie, E. A. Osuch, M. H. Zhu, X. Y. Ma, M. Wammes, T. Z. Jiang, J. Sui, and V. D.

Calhoun, "Discriminating Bipolar Disorder from Major Depression Using Whole-Brain

Functional Connectivity: A Feature Selection Analysis with Svm-Foba Algorithm," 2015 Ieee

41


International Workshop on Machine Learning for Signal Processing, 2015, PMC Journal - in

process.

[382] C. Kim, J. K. Kroger, V. D. Calhoun, and V. P. Clark, "The role of the frontopolar cortex in

manipulation of intergrated information in working memory," Neuroscience Letters, vol. 595, pp.


[383] L. D. Kuang, Q. H. Lin, X. F. Gong, F. Y. Cong, J. Sui, and V. D. Calhoun, "Multi-subject fMRI

analysis via combined independent component analysis and shift-invariant canonical polyadic

decomposition," Journal of Neuroscience Methods, vol. 256, pp. 127-140, Dec 30 2015, PMC

Journal - in process.

[384] J. Laney, K. P. Westlake, S. Ma, E. Woytowicz, V. D. Calhoun, and T. Adali, "Capturing subject

variability in fMRI data: A graph-theoretical analysis of GICA vs. IVA," J Neurosci Methods,

vol. 247, pp. 32-40, May 30 2015, PMC Journal - In Process.

[385] J. Y. Liu, P. S. Julnes, J. Y. Chen, S. Ehrlich, E. Walton, and V. D. Calhoun, "The association of

DNA methylation and brain volume in healthy individuals and schizophrenia patients,"

Schizophrenia Research, vol. 169, pp. 447-452, Dec 2015, PMC Journal - in process.

[386] A. R. Mayer, F. M. Hanlon, T. M. Teshiba, S. D. Klimaj, J. M. Ling, A. B. Dodd, V. D. Calhoun,

J. R. Bustillo, and T. Toulouse, "An fMRI study of multimodal selective attention in

schizophrenia," British Journal of Psychiatry, vol. 207, pp. 420-428, Nov 2015, PMC Journal - In

Process.

[387] S. A. Meda, Z. Wang, E. I. Ivleva, G. Poudyal, M. S. Keshavan, C. A. Tamminga, J. A. Sweeney,

B. A. Clementz, D. J. Schretlen, V. D. Calhoun, S. Lui, E. Damaraju, and G. D. Pearlson,

"Frequency-Specific Neural Signatures of Spontaneous Low-Frequency Resting State

Fluctuations in Psychosis: Evidence From Bipolar-Schizophrenia Network on Intermediate

Phenotypes (B-SNIP) Consortium," Schizophr Bull, vol. 41, pp. 1336-1348, Nov 2015,

PMC4601713.

[388] R. L. Miller, E. B. Erhardt, O. Agcaoglu, E. A. Allen, A. M. Michael, J. A. Turner, J. Bustillo, J.

M. Ford, D. H. Mathalon, T. M. Van Erp, S. Potkin, A. Preda, G. Pearlson, and V. D. Calhoun,

"Multidimensional frequency domain analysis of full-volume fMRI reveals significant effects of

age, gender, and mental illness on the spatiotemporal organization of resting-state brain activity,"

Frontiers in Neuroscience, vol. 9, Jun 16 2015, PMC Journal - In Process.

[389] B. Narayanan, P. Soh, V. D. Calhoun, G. Ruano, M. Kocherla, A. Windemuth, B. A. Clementz,

C. A. Tamminga, J. A. Sweeney, M. S. Keshavan, and G. D. Pearlson, "Multivariate genetic

determinants of EEG oscillations in schizophrenia and psychotic bipolar disorder from the BSNIP

study," Translational Psychiatry, vol. 5, Jun 23 2015, PMC Journal - In Process.

[390] V. S. Patel, S. Kelly, C. Wright, C. N. Gupta, A. Arias-Vasquez, N. Perrone-Bizzozero, S.

Ehrlich, L. Wang, J. R. Bustillo, D. Morris, A. Corvin, D. M. Cannon, C. McDonald, G.

Donohoe, V. D. Calhoun, and J. A. Turner, "MIR137HG risk variant rs1625579 genotype is

related to corpus callosum volume in schizophrenia," Neuroscience Letters, vol. 602, pp. 44-49,

Aug 18 2015, PMC Journal - In Process.

[391] P. Soh, B. Narayanan, S. Khadka, V. D. Calhoun, M. Keshavan, C. Tamminga, J. Sweeney, B. A.

Clementz, and G. Pearlson, "Joint Coupling of Awake EEG Frequency Activity and MRI Gray

Matter Volumes in the Psychosis Dimension: A BSNIP Study," Frontiers in Psychiatry, section

Affective Disorders and Psychosomatic Research, vol. 6, 2015, PMC Journal - in process.

[392] E. Sprooten, N. Gupta, E. E. Knowles, D. R. McKay, S. R. Mathias, J. E. Curran, J. Kent, M.

Carless, T. Dyer, H. Goring, J. Olvera, P. Fox, L. Almasy, R. Duggirala, V. D. Calhoun, J.

Blangero, J. Turner, and D. Glahn, "Genome-Wide Significant Linkage of Schizophrenia-Related

Neuroanatomical Trait to 12q24," Am J Med Genet B Neuropsychiatr Genet., vol. 168, pp. 678-

686, 2015, PMC Journal - in process.

[393] V. R. Steele, E. D. Claus, E. Aharoni, G. M. Vincent, V. D. Calhoun, and K. A. Kiehl,

"Multimodal imaging measures predict rearrest," Frontiers in Human Neuroscience, vol. 9, Aug 3


42


[394] J. Sui, G. D. Pearlson, Y. H. Du, Q. B. Yu, T. R. Jones, J. Y. Chen, T. Z. Jiang, J. Bustillo, and V.

D. Calhoun, "In Search of Multimodal Neuroimaging Biomarkers of Cognitive Deficits in

Schizophrenia," Biological Psychiatry, vol. 78, pp. 794-804, Dec 1 2015, PMC Journal - In

Process.

[395] J. C. Wang, H. B. Cao, Y. H. Liao, W. Q. Liu, L. W. Tan, Y. Q. Tang, J. D. Chen, X. F. Xu, H. J.

Li, C. R. Luo, C. Y. Liu, K. R. Merikangas, V. Calhoun, J. S. Tang, Y. Y. Shugart, and X. G.

Chen, "Three dysconnectivity patterns in treatment-resistant schizophrenia patients and their

unaffected siblings," Neuroimage-Clinical, vol. 8, pp. 95-103, 2015, PMC Journal - In Process.

[396] B. J. Weiland, A. Sabbineni, V. D. Calhoun, R. C. Welsh, and K. E. Hutchison, "Reduced

Executive and Default Network Functional Connectivity in Cigarette Smokers," Human Brain

Mapping, vol. 36, pp. 872-882, Mar 2015, PMC Journal - In Process.

[397] R. Wolthusen, J. Hass, E. Walton, J. Turner, V. Rossner, S. Sponheim, B. Ho, D. Holt, R. Gollub,

V. D. Calhoun, and S. Ehrlich, "Genetic underpinnings of left superior temporal gyrus thickness

in patients with schizophrenia," The World Journal of Biological Psychiatry, vol. 16, 2015.

[398] L. Wu, V. D. Calhoun, R. E. Jung, and A. Caprihan, "Connectivity-based whole brain dual

parcellation by group ICA reveals tract structures and decreased connectivity in schizophrenia,"

Human Brain Mapping, vol. 36, pp. 4681-4701, Nov 2015, PMC Journal - in process.

[399] J. S. Xu, V. D. Calhoun, P. D. Worhunsky, H. Xiang, J. Li, J. T. Wall, G. D. Pearlson, and M. N.

Potenza, "Functional Network Overlap as Revealed by fMRI Using sICA and Its Potential

Relationships with Functional Heterogeneity, Balanced Excitation and Inhibition, and Sparseness

of Neuron Activity," Plos One, vol. 10, Feb 25 2015, PMC Journal - In Process.

[400] M. Yaesoubi, R. L. Miller, and V. D. Calhoun, "Mutually temporally independent connectivity

patterns: a new framework to study the dynamics of brain connectivity at rest with application to

explain group difference based on gender," Neuroimage, vol. 107, pp. 85-94, Feb 15 2015,

PMC4631126.

[401] M. Yaesoubi, E. A. Allen, R. L. Miller, and V. D. Calhoun, "Dynamic coherence analysis of

resting fMRI data to jointly capture state-based phase, frequency, and time-domain information,"

Neuroimage, vol. 120, pp. 133-142, Oct 15 2015, PMC Journal - In Process.

[402] Q. Yu, E. B. Erhardt, J. Sui, Y. Du, H. He, D. Hjelm, M. S. Cetin, S. Rachakonda, R. L. Miller,

G. Pearlson, and V. D. Calhoun, "Assessing dynamic brain graphs of time-varying connectivity in

fMRI data: application to healthy controls and patients with schizophrenia," Neuroimage, vol.

107, pp. 345-355, Feb 15 2015, 4300250.

[403] M. C. Yu, Q. H. Lin, L. D. Kuang, X. F. Gong, F. Y. Cong, and V. D. Calhoun, "ICA of full

complex-valued fMRI data using phase information of spatial maps," Journal of Neuroscience

Methods, vol. 249, pp. 75-91, Jul 15 2015, PMC Journal - In Process.

[404] S. Zhang, S. J. Tsai, S. Hu, J. S. Xu, H. H. Chao, V. D. Calhoun, and C. S. R. Li, "Independent

component analysis of functional networks for response inhibition: Inter-subject variation in stop

signal reaction time," Human Brain Mapping, vol. 36, pp. 3289-3302, Sep 2015, PMC Journal -

In Process.

[405] H. H. Adams, D. P. Hibar, V. Chouraki, J. L. Stein, P. A. Nyquist, M. E. Renteria, S. Trompet, A.

Arias-Vasquez, S. Seshadri, S. Desrivieres, A. H. Beecham, N. Jahanshad, K. Wittfeld, S. J. Van

der Lee, L. Abramovic, S. Alhusaini, N. Amin, M. Andersson, K. Arfanakis, B. S. Aribisala, N. J.

Armstrong, L. Athanasiu, T. Axelsson, A. Beiser, M. Bernard, J. C. Bis, L. M. Blanken, S. H.

Blanton, M. M. Bohlken, M. P. Boks, J. Bralten, A. M. Brickman, O. Carmichael, M. M.

Chakravarty, G. Chauhan, Q. Chen, C. R. Ching, G. Cuellar-Partida, A. D. Braber, N. T. Doan, S.

Ehrlich, I. Filippi, T. Ge, S. Giddaluru, A. L. Goldman, R. F. Gottesman, C. U. Greven, O.

Grimm, M. E. Griswold, T. Guadalupe, J. Hass, U. K. Haukvik, S. Hilal, E. Hofer, D. Hoehn, A.

J. Holmes, M. Hoogman, D. Janowitz, T. Jia, D. Kasperaviciute, S. Kim, M. Klein, B. Kraemer,

P. H. Lee, J. Liao, D. C. Liewald, L. M. Lopez, M. Luciano, C. Macare, A. Marquand, M.

Matarin, K. A. Mather, M. Mattheisen, B. Mazoyer, D. R. McKay, R. McWhirter, Y. Milaneschi,

N. Mirza-Schreiber, R. L. Muetzel, S. M. Maniega, K. Nho, A. C. Nugent, L. M. Loohuis, J.

43


Oosterlaan, M. Papmeyer, I. Pappa, L. Pirpamer, S. Pudas, B. Putz, K. B. Rajan, A. Ramasamy, J.

S. Richards, S. L. Risacher, R. Roiz-Santianez, N. Rommelse, E. J. Rose, N. A. Royle, T.

Rundek, P. G. Samann, C. L. Satizabal, L. Schmaal, A. J. Schork, L. Shen, J. Shin, E.

Shumskaya, A. V. Smith, E. Sprooten, L. T. Strike, A. Teumer, R. Thomson, D. Tordesillas-

Gutierrez, R. Toro, D. Trabzuni, D. Vaidya, J. Van der Grond, D. Van der Meer, M. M. Van

Donkelaar, K. R. Van Eijk, T. G. Van Erp, D. Van Rooij, E. Walton, L. T. Westlye, C. D.

Whelan, B. G. Windham, A. M. Winkler, G. Woldehawariat, C. Wolf, T. Wolfers, B. Xu, L. R.

Yanek, J. Yang, A. Zijdenbos, M. P. Zwiers, I. Agartz, N. T. Aggarwal, L. Almasy, D. Ames, P.

Amouyel, O. A. Andreassen, S. Arepalli, A. A. Assareh, S. Barral, M. E. Bastin, D. M. Becker, J.

T. Becker, D. A. Bennett, J. Blangero, H. van Bokhoven, D. I. Boomsma, H. Brodaty, R. M.

Brouwer, H. G. Brunner, R. L. Buckner, J. K. Buitelaar, K. B. Bulayeva, W. Cahn, V. D.

Calhoun, D. M. Cannon, G. L. Cavalleri, C. Chen, C. Y. Cheng, S. Cichon, M. R. Cookson, A.

Corvin, B. Crespo-Facorro, J. E. Curran, M. Czisch, A. M. Dale, G. E. Davies, E. J. De Geus, P.

L. De Jager, G. I. de Zubicaray, N. Delanty, C. Depondt, A. L. DeStefano, A. Dillman, S.

Djurovic, G. Donohoe, W. C. Drevets, R. Duggirala, T. D. Dyer, S. Erk, T. Espeseth, D. A.

Evans, I. O. Fedko, G. Fernandez, L. Ferrucci, S. E. Fisher, D. A. Fleischman, I. Ford, T. M.

Foroud, P. T. Fox, C. Francks, M. Fukunaga, J. R. Gibbs, D. C. Glahn, R. L. Gollub, H. H.

Goring, H. J. Grabe, R. C. Green, O. Gruber, V. Gudnason, S. Guelfi, N. K. Hansell, J. Hardy, C.

A. Hartman, R. Hashimoto, K. Hegenscheid, A. Heinz, S. Le Hellard, D. G. Hernandez, D. J.

Heslenfeld, B. C. Ho, P. J. Hoekstra, W. Hoffmann, A. Hofman, F. Holsboer, G. Homuth, N.

Hosten, J. J. Hottenga, H. E. Pol, M. Ikeda, M. K. Ikram, C. R. Jack, Jr., M. Jenkinson, R.

Johnson, E. G. Jonsson, J. W. Jukema, R. S. Kahn, R. Kanai, I. Kloszewska, D. S. Knopman, P.

Kochunov, J. B. Kwok, S. M. Lawrie, H. Lemaitre, X. Liu, D. L. Longo, W. T. Longstreth, Jr., O.

L. Lopez, S. Lovestone, O. Martinez, J. L. Martinot, V. S. Mattay, C. McDonald, A. M.

McIntosh, K. L. McMahon, F. J. McMahon, P. Mecocci, I. Melle, A. Meyer-Lindenberg, S.

Mohnke, G. W. Montgomery, D. W. Morris, T. H. Mosley, T. W. Muhleisen, B. Muller-Myhsok,

M. A. Nalls, M. Nauck, T. E. Nichols, W. J. Niessen, M. M. Nothen, L. Nyberg, K. Ohi, R. L.

Olvera, R. A. Ophoff, M. Pandolfo, T. Paus, Z. Pausova, B. W. Penninx, G. B. Pike, S. G. Potkin,

B. M. Psaty, S. Reppermund, M. Rietschel, J. L. Roffman, N. Romanczuk-Seiferth, J. I. Rotter,

M. Ryten, R. L. Sacco, P. S. Sachdev, A. J. Saykin, R. Schmidt, P. R. Schofield, S. Sigurdsson,

A. Simmons, A. Singleton, S. M. Sisodiya, C. Smith, J. W. Smoller, H. Soininen, V. Srikanth, V.

M. Steen, D. J. Stott, J. E. Sussmann, A. Thalamuthu, H. Tiemeier, A. W. Toga, B. J. Traynor, J.

Troncoso, J. A. Turner, C. Tzourio, A. G. Uitterlinden, M. C. Hernandez, M. Van der Brug, A.

Van der Lugt, N. J. Van der Wee, C. M. Van Duijn, N. E. Van Haren, T. E. D. Van, M. J. Van

Tol, B. N. Vardarajan, D. J. Veltman, M. W. Vernooij, H. Volzke, H. Walter, J. M. Wardlaw, T.

H. Wassink, M. E. Weale, D. R. Weinberger, M. W. Weiner, W. Wen, E. Westman, T. White, T.

Y. Wong, C. B. Wright, H. R. Zielke, A. B. Zonderman, I. J. Deary, C. DeCarli, H. Schmidt, N.

G. Martin, A. J. De Craen, M. J. Wright, L. J. Launer, G. Schumann, M. Fornage, B. Franke, S.

Debette, S. E. Medland, M. A. Ikram and P. M. Thompson, "Novel genetic loci underlying

human intracranial volume identified through genome-wide association," Nat Neurosci, vol. 19,

pp. 1569-1582, Dec 2016, PMC Journal - in process.

[406] O. Agcaoglu, R. Miller, A. R. Mayer, K. Hugdahl, and V. D. Calhoun, "Increased spatial

granularity of left brain activation and unique age/gender signatures: a 4D frequency domain

approach to cerebral lateralization at rest," Brain Imaging Behav, vol. 10, pp. 1004-1014, Dec

2016, PMC journal - in process.

[407] C. H. Bao, P. Liu, H. R. Liu, L. Y. Wu, X. M. Jin, S. Y. Wang, Y. Shi, J. Y. Zhang, X. Q. Zeng,

L. L. Ma, W. Qin, J. M. Zhao, V. D. Calhoun, J. Tian, and H. G. Wu, "Differences in regional

homogeneity between patients with Crohn's disease with and without abdominal pain revealed by

resting-state functional magnetic resonance imaging," Pain, vol. 157, pp. 1037-1044, 2016, PMC


44


[408] D. A. Bridwell, S. Rachakonda, R. F. Silva, G. D. Pearlson, and V. D. Calhoun, "Spatiospectral

Decomposition of Multi-subject EEG: Evaluating Blind Source Separation Algorithms on Real

and Realistic Simulated Data," Brain Topogr, Feb 24 2016, PMC4996763.

[409] C. Cabral, L. Kambeitz-Ilankovic, J. Kambeitz, V. D. Calhoun, D. B. Dwyer, S. von Saldern, M.

F. Urquijo, P. Falkai, and N. Koutsouleris, "Classifying Schizophrenia Using Multimodal

Multivariate Pattern Recognition Analysis: Evaluating the Impact of Individual Clinical Profiles

on the Neurodiagnostic Performance," Schizophr Bull, vol. 42 Suppl 1, pp. S110-117, Jul 2016,

PMC4960438.

[410] V. D. Calhoun and T. Adali, "Time-Varying Brain Connectivity in fMRI Data: Whole-brain data-

driven approaches for capturing and characterizing dynamic states," IEEE Signal Processing

Magazine, vol. 33, pp. 52-66, 2016, PMC Journal - in process.

[411] V. D. Calhoun and J. Sui, "Multimodal fusion of brain imaging data: A key to finding the missing

link(s) in complex mental illness," Biol Psychiatry Cogn Neurosci Neuroimaging, vol. 1, pp. 230-

244, May 2016, PMC4917230.

[412] E. Castro, R. D. Hjelm, S. M. Plis, L. Dinh, J. A. Turner, and V. D. Calhoun, "Deep

Independence Network Analysis of Structural Brain Imaging: Application to Schizophrenia," Ieee

Transactions on Medical Imaging, vol. 35, pp. 1729-1740, Jul 2016, PMC Journal - in process.

[413] M. S. Cetin, J. M. Houck, B. Rashid, O. Agacoglu, J. M. Stephen, J. Sui, J. Canive, A. Mayer, C.

Aine, J. R. Bustillo, and V. D. Calhoun, "Multimodal Classification of Schizophrenia Patients

with MEG and fMRI Data Using Static and Dynamic Connectivity Measures," Front Neurosci,

vol. 10, p. 466, 2016, PMC5070283.

[414] I. Chavarria-Siles, T. White, C. de Leeuw, A. Goudriaan, E. Lips, S. Ehrlich, J. A. Turner, V. D.

Calhoun, R. L. Gollub, V. A. Magnotta, B. C. Ho, A. B. Smit, M. H. G. Verheijen, and D.

Posthuma, "Myelination-related genes are associated with decreased white matter integrity in

schizophrenia," European Journal of Human Genetics, vol. 24, pp. 381-386, Mar 2016, PMC


[415] J. Chen, V. D. Calhoun, N. I. Perrone-Bizzozero, G. D. Pearlson, J. Sui, Y. Du, and J. Liu, "A

pilot study on commonality and specificity of copy number variants in schizophrenia and bipolar

disorder," Translational Psychiatry, vol. 6, May 31 2016, PMC Journal - in process.

[416] Z. Chen, J. Robinson, A. Caprihan, and V. D. Calhoun, "High-Resolution 7T EPI

Magnitude/Phase Cortex Image Co-Localization," Clin Med Img Lib, vol. 2, 2016, PMC Journal

- in process.

[417] J. A. Ciarochi, V. D. Calhoun, S. Lourens, J. D. Long, H. J. Johnson, H. J. Bockholt, J. Y. Liu, S.

M. Plis, J. S. Paulsen, J. A. Turner, and P.-H. I. C. Hun, "Patterns of Co-Occurring Gray Matter

Concentration Loss across the Huntington Disease Prodrome," Frontiers in Neurology, vol. 7, Sep

21 2016, PMC Journal - in process.

[418] Y. H. Du, G. D. Pearlson, Q. B. Yu, H. He, D. D. Lin, J. Sui, L. Wu, and V. D. Calhoun,

"Interaction among subsystems within default mode network diminished in schizophrenia

patients: A dynamic connectivity approach," Schizophrenia Research, vol. 170, pp. 55-65, Jan


[419] Y. H. Du, E. A. Allen, H. He, J. Sui, L. Wu, and V. D. Calhoun, "Artifact removal in the context

of group ICA: A comparison of single-subject and group approaches," Human Brain Mapping,

vol. 37, pp. 1005-1025, Mar 2016, PMC Journal - in process.

[420] W. Du, Y. Levin-Schwartz, G. S. Fu, S. Ma, V. D. Calhoun, and T. Adali, "The role of diversity

in complex ICA algorithms for fMRI analysis," Journal of Neuroscience Methods, vol. 264, pp.

129-135, May 1 2016, PMC Journal - in process.

[421] S. J. Fede, C. L. Harenski, J. S. Borg, W. Sinnott-Armstrong, V. Rao, B. M. Caldwell, P. K.

Nyalakanti, M. R. Koenigs, J. Decety, V. D. Calhoun, and K. A. Kiehl, "Abnormal fronto-limbic

engagement in incarcerated stimulant users during moral processing," Psychopharmacology, vol.

233, pp. 3077-3087, Sep 2016, PMC Journal - in process.

45


[422] B. C. Fink, V. R. Steele, M. J. Maurer, S. J. Fede, V. D. Calhoun, and K. A. Kiehl, "Brain

potentials predict substance abuse treatment completion in a prison sample," Brain and Behavior,

vol. 6, Aug 2016, PMC Journal - in process.

[423] B. Franke, J. L. Stein, S. Ripke, V. Anttila, D. P. Hibar, K. J. van Hulzen, A. Arias-Vasquez, J.

W. Smoller, T. E. Nichols, M. C. Neale, A. M. McIntosh, P. Lee, F. J. McMahon, A. Meyer-

Lindenberg, M. Mattheisen, O. A. Andreassen, O. Gruber, P. S. Sachdev, R. Roiz-Santianez, A. J.

Saykin, S. Ehrlich, K. A. Mather, J. A. Turner, E. Schwarz, A. Thalamuthu, Y. Yao, Y. Y. Ho, N.

G. Martin, M. J. Wright, C. Schizophrenia Working Group of the Psychiatric Genomics, C.

Psychosis Endophenotypes International, C. Wellcome Trust Case Control, C. Enigma, V. D.

Calhoun, M. C. O'Donovan, P. M. Thompson, B. M. Neale, S. E. Medland, and P. F. Sullivan,

"Genetic influences on schizophrenia and subcortical brain volumes: large-scale proof of

concept," Nat Neurosci, vol. 19, pp. 420-431, Mar 2016.

[424] S. Gopal, R. L. Miller, A. Michael, T. Adali, M. Cetin, S. Rachakonda, J. R. Bustillo, N. Cahill,

S. A. Baum, and V. D. Calhoun, "Spatial Variance in Resting fMRI Networks of Schizophrenia

Patients: An Independent Vector Analysis," Schizophrenia Bulletin, vol. 42, pp. 152-160, Jan


[425] S. Gopal, R. L. Miller, S. A. Baum, and V. D. Calhoun, "Approaches to Capture Variance

Differences in Rest fMRI Networks in the Spatial Geometric Features: Application to

Schizophrenia," Frontiers in Neuroscience, vol. 10, Mar 7 2016, PMC Journal - in process.

[426] K. Gorgolewski, T. Auer, V. D. Calhoun, C. Craddock, S. Das, E. Duff, G. Flandin, S. Ghosh, T.

Glatard, Y. O. Halchenko, D. A. Handwerker, M. Hanke, D. Keator, X. Li, Z. Michael, C.

Maumet, B. N. Nichols, T. Nichols, J. Pellman, J. B. Poline, A. Rokem, G. Shaefer, V. Sochat,

W. Triplett, J. Turner, G. Varoquaux, and R. A. Poldrack, "The Brain Imaging Data Structure, a

format for organizing and describing outputs of neuroimaging experiments," Scientific Data,


[427] H. He, Q. B. Yu, Y. H. Du, V. Vergara, T. A. Victor, W. C. Drevets, J. B. Savitz, T. Z. Jiang, J.

Sui, and V. D. Calhoun, "Resting-state functional network connectivity in prefrontal regions

differs between unmedicated patients with bipolar and major depressive disorders," Journal of

Affective Disorders, vol. 190, pp. 483-493, Jan 15 2016, PMC Journal - in process.

[428] A. Iraji, V. D. Calhoun, N. M. Wiseman, E. Davoodi-Bojd, M. R. N. Avanaki, E. M. Haacke, and

Z. F. Kou, "The connectivity domain: Analyzing resting state fMRI data using feature-based data-

driven and model-based methods," Neuroimage, vol. 134, pp. 494-507, Jul 1 2016, PMC Journal -

in process.

[429] J. Kambeitz, L. Kambeitz-Ilankovic, C. Cabral, D. B. Dwyer, V. D. Calhoun, M. P. van den

Heuvel, P. Falkai, N. Koutsouleris, and B. Malchow, "Aberrant Functional Whole-Brain Network

Architecture in Patients With Schizophrenia: A Meta-analysis," Schizophrenia Bulletin, vol. 42,

pp. S13-S21, Jul 2016, PMC Journal - in progress.

[430] D. B. Keator, T. G. M. van Erp, J. A. Turner, G. H. Glover, B. A. Mueller, T. T. Liu, J. T.

Voyvodic, J. Rasmussen, V. D. Calhoun, H. J. Lee, A. W. Toga, S. McEwen, J. M. Ford, D. H.

Mathalon, M. Diaz, D. S. O'Leary, H. J. Bockholt, S. Gadde, A. Preda, C. G. Wible, H. S. Stern,

A. Belger, G. McCarthy, B. Ozyurt, S. G. Potkin, and Fbirn, "The Function Biomedical

Informatics Research Network Data Repository," Neuroimage, vol. 124, pp. 1074-1079, Jan 1


[431] S. Khadka, G. D. Pearlson, V. D. Calhoun, J. Y. Liu, J. Gelernter, K. L. Bessette, and M. C.

Stevens, "Multivariate Imaging Genetics Study of MRI Gray Matter Volume and SNPs Reveals

Biological Pathways Correlated with Brain Structural Differences in Attention Deficit

Hyperactivity Disorder," Frontiers in Psychiatry, vol. 7, Jul 25 2016, PMC Journal - in process.

[432] J. Kim, V. D. Calhoun, E. Shim, and J. H. Lee, "Deep neural network with weight sparsity control

and pre-training extracts hierarchical features and enhances classification performance: Evidence

from whole-brain resting-state functional connectivity patterns of schizophrenia," Neuroimage,

vol. 124, pp. 127-146, Jan 1 2016, PMC Journal - In Process.

46


[433] D. Landis, W. Courtney, C. Dieringer, R. Kelly, M. King, B. Miller, R. T. Wang, D. Wood, J. A.

Turner, and V. D. Calhoun, "COINS Data Exchange: An open platform for compiling, curating,

and disseminating neuroimaging data," Neuroimage, vol. 124, pp. 1084-1088, Jan 1 2016, PMC


[434] Y. Levin-Schwartz, Y. Song, P. J. Schreier, V. D. Calhoun, and T. Adali, "Sample-poor

estimation of order and common signal subspace with application to fusion of medical imaging

data," Neuroimage, vol. 134, pp. 486-493, Jul 1 2016, PMC Journal - in process.

[435] P. Liu, J. Yang, G. Wang, Y. Liu, X. Liu, L. Jin, F. Liang, W. Qin, and V. D. Calhoun, "Altered

regional cortical thickness and subcortical volume in women with primary dysmenorrhoea,"

European Journal of Pain, vol. 20, pp. 512-520, Apr 2016, PMC Journal - in process.

[436] P. Liu, G. Wang, Y. Liu, Q. Yu, F. Yang, L. Jin, J. Sun, X. Yang, W. Qin, and V. D. Calhoun,

"White matter microstructure alterations in primary dysmenorrhea assessed by diffusion tensor

imaging," Sci Rep, vol. 6, p. 25836, 2016, PMC4861968.

[437] M. J. Lowe, K. E. Sakaie, E. B. Beall, V. D. Calhoun, D. A. Bridwell, M. Rubinov, and S. M.

Rao, "Modern Methods for Interrogating the Human Connectome," Journal of the International

Neuropsychological Society, vol. 22, pp. 105-119, Feb 2016, PMC Journal - in process.

[438] J. M. Maurer, V. R. Steele, B. G. Edwards, E. M. Bernat, V. D. Calhoun, and K. A. Kiehl,

"Dysfunctional error-related processing in female psychopathy," Social Cognitive and Affective

Neuroscience, vol. 11, pp. 1059-1068, Jul 2016, PMC Journal - In Process.

[439] J. M. Maurer, V. R. Steele, L. M. Cope, G. M. Vincent, J. M. Stephen, V. D. Calhoun, and K. A.

Kiehl, "Dysfunctional error-related processing in incarcerated youth with elevated psychopathic

traits," Developmental Cognitive Neuroscience, vol. 19, pp. 70-77, Jun 2016, PMC Journal - in

process.

[440] R. L. Miller, M. Yaesoubi, J. A. Turner, D. Mathalon, A. Preda, G. Pearlson, T. Adali, and V. D.

Calhoun, "Higher Dimensional Meta-State Analysis Reveals Reduced Resting fMRI Connectivity

Dynamism in Schizophrenia Patients," PLoS One, vol. 11, p. e0149849, 2016, PMC4794213.

[441] R. L. Miller, M. Yaesoubi, and V. D. Calhoun, "Cross-Frequency rs-fMRI Network Connectivity

Patterns Manifest Differently for Schizophrenia Patients and Healthy Controls," IEEE Signal

Processing Letters, vol. 23, pp. 1076-1080, Aug 2016, PMC Journal - in process.

[442] J. S. Nomi, K. Farrant, E. Damaraju, S. Rachakonda, V. D. Calhoun, and L. Q. Uddin, "Dynamic

functional network connectivity reveals unique and overlapping profiles of insula subdivisions,"

Human Brain Mapping, vol. 37, pp. 1770-1787, May 2016, PMC Journal - in process.

[443] S. R. Panta, R. T. Wang, J. Fries, R. Kalyanam, N. Speer, M. Banich, K. Kiehl, M. King, M.

Milham, T. D. Wager, J. A. Turner, S. M. Plis, and V. D. Calhoun, "A Tool for Interactive Data

Visualization: Application to Over 10,000 Brain Imaging and Phantom MRI Data Sets," Frontiers

in Neuroinformatics, vol. 10, Mar 15 2016, PMC Journal - in process.

[444] S. M. Plis, A. D. Sarwate, D. Wood, C. Dieringer, D. Landis, C. Reed, S. R. Panta, J. A. Turner,

J. M. Shoemaker, K. W. Carter, P. Thompson, K. Hutchison, and V. D. Calhoun, "COINSTAC:

A Privacy Enabled Model and Prototype for Leveraging and Processing Decentralized Brain

Imaging Data," Frontiers in Neuroscience, vol. 10, Aug 19 2016, PMC Journal - in process.

[445] S. Rachakonda, R. F. Silva, J. Liu, and V. D. Calhoun, "Memory Efficient PCA Methods for

Large Group ICA," Front Neurosci, vol. 10, p. 17, 2016, PMC4735350.

[446] B. Rashid, M. R. Arbabshirani, E. Damaraju, M. S. Cetin, R. Miller, G. D. Pearlson, and V. D.

Calhoun, "Classification of schizophrenia and bipolar patients using static and dynamic resting-

state fMRI brain connectivity," Neuroimage, vol. 134, pp. 645-657, Apr 23 2016, PMC Journal -

in process.

[447] H. I. Sair, N. Yahyavi-Firouz-Abadi, V. D. Calhoun, R. D. Airan, S. Agarwal, J. Intrapiromkul,

A. S. Choe, S. K. Gujar, B. Caffo, M. A. Lindquist, and J. J. Pillai, "Presurgical brain mapping of

the language network in patients with brain tumors using resting-state fMRI: Comparison with

task fMRI," Human Brain Mapping, vol. 37, pp. 913-923, Mar 2016, PMC Journal - in process.

47


[448] Z. Y. Shan, A. A. Vinkhuyzen, P. M. Thompson, K. L. McMahon, G. A. Blokland, G. I. de

Zubicaray, V. Calhoun, N. G. Martin, P. M. Visscher, M. J. Wright, and D. C. Reutens, "Genes

influence the amplitude and timing of brain hemodynamic responses," Neuroimage, vol. 124, pp.

663-671, Jan 1 2016, PMC Journal - in process.

[449] R. F. Silva, S. M. Plis, J. Sui, M. S. Pattichis, T. Adali, and V. D. Calhoun, "Blind Source

Separation for Unimodal and Multimodal Brain Networks: A Unifying Framework for Subspace

Modeling," Ieee Journal of Selected Topics in Signal Processing, vol. 10, pp. 1134-1149, Oct


[450] V. R. Steele, N. E. Anderson, E. D. Claus, E. M. Bernat, V. Rao, M. Assaf, G. D. Pearlson, V. D.

Calhoun, and K. A. Kiehl, "Neuroimaging measures of error-processing: Extracting reliable

signals from event-related potentials and functional magnetic resonance imaging," Neuroimage,

vol. 132, pp. 247-260, May 15 2016, PMC Journal - in process.

[451] R. J. Thoma, C. Chaze, J. D. Lewine, V. D. Calhoun, V. P. Clark, J. Bustillo, J. Houck, J. Ford,

R. Bigelow, C. Wilhelmi, J. M. Stephen, and J. A. Turner, "Functional MRI evaluation of

Multiple neural networks Underlying auditory Verbal hallucinations in schizophrenia spectrum

Disorders," Frontiers in Psychiatry, vol. 7, Mar 29 2016, PMC Journal - in process.

[452] V. M. Vergara, A. R. Mayer, E. Damaraju, K. A. Kiehl, and V. Calhoun, "Detection of Mild

Traumatic Brain Injury by Machine Learning Classification Using Resting State Functional

Network Connectivity and Fractional Anisotropy," J Neurotrauma, Nov 21 2016, PMC Journal -

in process.

[453] J. Vogelstein, B. Mensh, M. Hausser, N. Spruston, A. Evans, K. Kording, K. Amunts, C. Ebel, J.

Mueller, M. Telefont, S. Hill, S. Koushika, C. Cali, P. A. Valdes-Sosa, P. K. Littlewood, C., S.

Saalfeld, A. Kepecs, H. Peng, Y. O. Halchenko, G. Kiar, M. Poo, J. B. Poline, M. Milham, A.

Schaffer, R. Gidron, H. Okano, V. D. Calhoun, M. Chun, D. M. Kleissas, R. J. Vogelstein, E.

Perlman, R. Burns, R. Huganir, and M. Miller, "To the Cloud! A Grassroots Proposal to

Accelerate Brain Science Discovery," Neuron, vol. 92, pp. 622-627, 2016.

[454] E. Walton, J. Hass, J. Y. Liu, J. L. Roffman, F. Bernardoni, V. Roessner, M. Kirsch, G.

Schackert, V. Calhoun, and S. Ehrlich, "Correspondence of DNA Methylation Between Blood

and Brain Tissue and Its Application to Schizophrenia Research," Schizophrenia Bulletin, vol. 42,

pp. 406-414, Mar 2016, PMC Journal - In Progress.

[455] L. Wang, K. I. Alpert, V. D. Calhoun, D. J. Cobia, D. B. Keator, M. D. King, A. Kogan, D.

Landis, M. Tallis, M. D. Turner, S. G. Potkin, J. A. Turner, and J. L. Ambite, "SchizConnect:

Mediating neuroimaging databases on schizophrenia and related disorders for large-scale

integration," Neuroimage, vol. 124, pp. 1155-1167, Jan 1 2016, PMC Journal - In Process.

[456] R. A. Yeo, S. G. Ryman, M. P. van den Heuvel, M. A. de Reus, R. E. Jung, J. Pommy, A. R.

Mayer, S. Ehrlich, S. C. Schulz, E. M. Morrow, D. Manoach, B. C. Ho, S. R. Sponheim, and V.

D. Calhoun, "Graph Metrics of Structural Brain Networks in Individuals with Schizophrenia and

Healthy Controls: Group Differences, Relationships with Intelligence, and Genetics," Journal of

the International Neuropsychological Society, vol. 22, pp. 240-249, Feb 2016, PMC Journal - in

process.

[457] Q. B. Yu, L. Wu, D. A. Bridwell, E. B. Erhardt, Y. H. Du, H. He, J. Y. Chen, P. Liu, J. Sui, G.

Pearlson, and V. D. Calhoun, "Building an EEG-fMRI Multi-Modal Brain Graph: A Concurrent

EEG-fMRI Study," Frontiers in Human Neuroscience, vol. 10, Sep 28 2016, PMC Journal - in

process.

[458] M. R. Arbabshirani, S. Plis, J. Sui, and V. D. Calhoun, "Single subject prediction of brain

disorders in neuroimaging: Promises and pitfalls," Neuroimage, vol. 145, pp. 137-165, Jan 15

2017, PMC5031516.

[459] V. D. Calhoun, S. M. Lawrie, J. Mourao-Miranda, and K. E. Stephan, "Prediction of Individual

Differences from Neuroimaging Data," Neuroimage, vol. 145, pp. 135-136, Jan 15 2017, PMC


48


In Press Journal Articles:

[1] N. E. Anderson, V. Steele, M. Maurer, V. Rao, J. Decety, D. Kosson, V. D. Calhoun, and K. A.

Kiehl, "Differentiating Emotional Processing and Attention in Psychopathy with Functional

Neuroimaging," Cognitive, Affective, and Behavioral Neuroscience, in press, PMC Journal - in

process.

[2] R. Bogdan, B. J. Salmeron, C. E. Carey, A. Agrawal, V. D. Calhoun, H. Garavan, A. Hariri, A.

Heinz, M. N. Hill, A. Holmes, N. H. Kalin, and D. Goldman, "Imaging genetics and genomics in

psychiatry: A critical review of progress and potential," Biological Psychiatry, in press, PMC


[3] Z. Chen and V. D. Calhoun, "3D Magnetic Susceptibility Reconstruction from T2* phase images

by total variation regularized deconvolution with split Bregman iteration," Physics in Medicine

and Biology, in press, PMC Journal - In Process.

[4] Z. Chen and V. D. Calhoun, "Task-evoked brain functional magnetic susceptibility mapping by

independent component analysis (cICA)," Journal of Neuroscience Methods, in press, PMC


[5] Z. Chen and V. D. Calhoun, "T2* phase imaging and processing for brain functional magnetic

susceptibility (c) mapping," Biomedical Physics and Engineering Express (BPEX), in press, PMC


[6] J. Chen, V. D. Calhoun, G. D. Pearlson, N. Perrone-Bizzozero, J. Turner, S. Ehrlich, B. C. Ho,

and J. Liu, "Independent Component Analysis of SNPs Reflects Polygenic Risk Scores for

Schizophrenia," Schizophrenia Research, in press, PMC Journal - in process.

[7] T. Chung, A. Noronha, K. Carroll, M. N. Potenza, K. Hutchison, V. D. Calhoun, J. D. Gabrieli, J.

Morgenstern, S. J. Nixon, B. E. Wexler, J. B. Brewer, L. Ray, F. Filbey, T. Strauman, H. Kober,

and S. Feldstein Ewing, "Brain Mechanisms of Change in Addiction Treatment: Models,

Methods, and Emerging Findings," Curr Addict Rep, in press, PMC Journal - in process.

[8] E. Damaraju, E. Allen, L. Wu, T. Eichele, and V. D. Calhoun, "EEG signatures of dynamic

functional network connectivity states," Brain Topogr, in press, PMC Journal - in progress.

[9] P. Das, V. D. Calhoun, and G. S. Malhi, "Bipolar and borderline patients display differential

patterns of functional connectivity among resting state networks," NeuroImage, in press, PMC


[10] J. Fang, D. Lin, Z. Xu, V. D. Calhoun, and Y.-P. Wang, "Joint Sparse Canonical Correlation

Analysis for Detecting Differential Imaging Genetics Modules," Bioinformatics in press, PMC


[11] S. Fede, J. Schaich Borg, P. K. Nyalakanti, L. M. Cope, W. Sinnott-Armstrong, J. P. Newman,

M. Koenigs, V. D. Calhoun, and K. A. Kiehl, "Distinct neuronal activation patterns of positive

and negative moral processing in psychopathy," Cognitive, Affective, and Behavioral

Neuroscience, in press, PMC Journal - in process.

[12] T. Guadalupe, S. Mathias, T. van Erp, C. Whelan, M. Zwiers, Y. Abe, L. Abramovic, I. Agartz,

O. Andreassen, A. Arias-Vásquez, B. Aribisala, N. Armstrong, V. Arolt, E. Artiges, R. Ayesa-

Arriola, V. Baboyan, T. Banaschewski, G. Barker, M. Bastin, B. Baune, J. Blangero, A. Bokde,

P. Boedhoe, A. Bose, S. Brem, H. Brodaty, U. Bromberg, S. Brooks, C. Büchel, J. Buitelaar, V.

Calhoun, D. Cannon, A. Cattrell, Y. Cheng, P. Conrod, A. Conzelmann, A. Corvin, B. Crespo

Facorro, F. Crivello, U. Dannlowski, G. de Zubicaray, S. de Zwarte, I. Deary, S. Desrivières, N.

Doan, G. Donohoe, E. Dørum, S. Ehrlich, T. Espeseth, G. Fernández, H. Flor, J. Fouche, V.

Frouin, M. Fukunaga, J. Gallinat, H. Garavan, M. Gill, A. Gonzalez Suarez , P. Gowland, H.

Grabe, D. Grotegerd, O. Gruber, S. Hagenaars, R. Hashimoto, T. Hauser, A. Heinz, D. Hibar, P.

Hoekstra, M. Hoogman, F. Howells, H. Hu, H. Hulshoff Pol, C. Huyser, B. Ittermann, N.

Jahanshad, E. Jönsson, S. Jurk, R. Kahn, S. Kelly, B. Kraemer, H. Kugel, J. Kwon, H. Lemaitre,

K. Lesch, C. Lochner, M. Luciano, A. Marquand, N. Martin, I. Martínez-Zalacaín, J. Martinot, D.

Mataix-Cols, K. Mather, C. McDonald, K. McMahon, S. Medland, J. Menchón, D. Morris, O.

49


Mothersill, S. Munoz Maniega , B. Mwangi, T. Nakamae, T. Nakao, J. Narayanaswaamy, F.

Nees, J. Nordvik, A. Onnink, N. Opel, R. Ophoff, M. Paillère Martinot , D. Papadopoulos

Orfanos , P. Pauli, T. Paus, L. Poustka, J. Reddy, M. Renteria, R. Roiz-Santiáñez, A. Roos, N.

Royle, P. Sachdev, Sánchez-Juan, L. Schmaal, G. Schumann, E. Shumskaya, M. Smolka, J.

Soares, C. Soriano-Mas, D. Stein, L. Strike, R. Toro, J. Turner, N. Tzourio-Mazoyer, A.

Uhlmann, M. Valdés Hernández , O. van den Heuvel, D. van der Meer, N. van Haren, D.

Veltman, G. Venkatasubramanian, N. Vetter, D. Vuletic, S. Walitza, H. Walter, E. Walton, Z.

Wang, J. Wardlaw, W. Wen, L. Westlye, R. Whelan, K. Wittfeld, T. Wolfers, M. Wright, J. Xu,

X. Xu, J. Yun, J. Zhao, B. Franke, P. Thompson, D. Glahn, B. Mazoyer, S. Fisher and C. Francks,

"Human subcortical brain asymmetries in 15,847 people worldwide reveal effects of age and

sex," Brain Imaging and Behavior, in press, PMC Journal - in process.

[13] S. M. Hare, E. Damaraju, A. Belger, J. Ford, D. Mathalon, B. Mueller, A. Preda, T. Van Erp, V.

D. Calhoun, and J. A. Turner, "Modality-Dependent Impact of Chronic Hallucinations on Low-

Frequency Oscillations in Schizophrenia," Schizophr Bull, in press, PMC Journal - in process.

[14] C. L. Harenski, M. Brook, D. Kosson, J. Bustillo, K. Harenski, M. F. Caldwell, G. Rybroek, M.

Koenigs, J. Decety, D. Thornton, V. D. Calhoun, and K. A. Kiehl, "Socio-Neuro Risk Factors for

Suicidal Behavior in Criminal Offenders with Psychotic Disorders," Social Cognitive and

Affective Neuroscience, in press, PMC Journal - in process.

[15] J. M. Houck, M. Cetin, A. R. Mayer, J. Bustillo, J. Stephen, C. Aine, J. Canive, N. Perrone-

Bizzozero, R. J. Thoma, M. Brookes, and V. D. Calhoun, "MEG and fMRI connectomics in

schizophrenia via intra- and inter-network connectivity," NeuroInformatics, in press, PMC

Journal - in progress.

[16] S. Jamadar, G. Egan, V. D. Calhoun, B. Johnson, and J. Fielding, "Intrinsic connectivity provides

the baseline framework for individual variability in motor performance: a multivariate fusion

analysis of low- and high-frequency resting-state oscillations and antisaccade performance,"

Brain, in press, PMC Journal - in process.

[17] H. Jang, S. Plis, V. D. Calhoun, and J.-H. Lee, "Task-specific feature extraction and classification

of fMRI volumes using a deep neural network initialized with a deep belief network: Evaluation

using sensorimotor tasks," NeuroImage, in press, PMC Journal - in process.

[18] R. Kalyanam, D. Boutte, K. Hutchison, and V. D. Calhoun, "Application of ICA to realistically

simulated 1H-MRS data " Brain and Behavior, in press, PMC Journal - In Process.

[19] S. Kyathanahally, A. Franco-Watkins, X. Zhang, V. D. Calhoun, and G. Deshpande, "A realistic

framework for investigating decision-making in the brain with high spatio-temporal resolution

using simultaneous EEG/fMRI and joint ICA," IEEE Journal of Biomedical and Health

Informatics (J-BHI), in press, PMC Journal - in process.

[20] J. Liu, J. Chen, S. Ehrlich, E. Walton, T. White, N. Perrone-Bizzozero, J. Bustillo, J. Turner, and

V. D. Calhoun, "Methylation patterns of whole blood indicate status of schizophrenia patients,"

Schizophr Bull, in press, PMC Journal - In Process.

[21] K. K. Lottman, N. V. Kraguljac, D. M. White, C. J. Morgan, V. D. Calhoun, A. Butt, and A. C.

Lahti, "Risperidone Effects on Brain Dynamic Connectivity– a Prospective Resting State fMRI

Study in Schizophrenia," Frontiers in Psychiatry, section Schizophrenia, in press, PMC Journal -

in process.

[22] H. Marusak, V. D. Calhoun, S. Brown, L. Crespo, S.-H. K., I. Gotlib, and M. E. Thomason,

"Dynamic functional connectivity of neurocognitive networks in children," Human Brain

Mapping, in press, PMC Journal - in process.

[23] A. R. McDonald, J. Muraskin, N. Van Dam, C. Froehlich, B. Puccio, J. Pellman, C. Bauer, A.

Akeyson, M. Breland, V. D. Calhoun, S. Carter, T. Chang, C. Gessner, A. Gianonne, S. Giavasis,

J. O. Glass, S. Homan, M. King, M. A. Kramer, D. Landis, A. Lieval, J. Lisinski, A. Mackay-

Brandt, B. Miller, L. Panek, R. Hayley, C. Santigo, E. Schoell, R. Sinning, M. Sital, E. Taverna,

R. Tobe, K. Trautman, B. Varghese, L. WAlder, R. Wang, A. Waters, D. Wood, F. X.

Castellanos, B. Levanthal, S. Colcombe, S. LaConte, M. Milham, and C. Craddock, "The Real-

50


time fMRI Neurofeedback Based Stratifcation of Default Network Regulation Neuroimaging

Data Repository," NeuroImage, in press, PMC Journal - in process.

[24] S. Meda, Z. Wang, M. Keshavan, C. Tamminga, J. A. Sweeney, B. A. Clementz, D. Schretlen, V.

D. Calhoun, E. I. Ivleva, G. Poudyal, S. Lui, E. Damaraju, and G. D. Pearlson, "Frequency

specific neural signatures of spontaneous low-frequency resting state fluctuations in psychosis: A

large scale multi-site BSNIP study," Schizophr Bull, in press, PMC Journal - In Process.

[25] X. Meng, R. Jiang, D. Lin, J. Bustillo, T. Jones, J. Chen, Q. Yu, Y. Zhang, T. Jiang, and V.

Calhoun, "Predicting Individualized Clinical Measures by a Generalized Prediction Framework

and Multimodal Fusion of MRI Data," NeuroImage, in press, PMC Journal - in process.

[26] R. L. Miller, V. M. Vergara, D. B. Keator, and V. D. Calhoun, "A Method for Inter-temporal

Functional Domain Connectivity Analysis: Application to Schizophrenia Reveals Distorted

Directional Information Flow," IEEE Transactions on Biomedical Engineering, in press, PMC


[27] M. Misiura, S. Lourens, V. D. Calhoun, J. Long, H. J. Bockholt, H. Johnson, and Y. Zhang,

"Cognitive control, learning and clinical motor ratings are most highly associated with basal

ganglia brain volumes in the premanifest Huntington’s disease phenotype," Journal of the

International Neuropsychological Society, in press, PMC Journal - in process.

[28] B. Narayanan, L. E. Ethridge, K. O'Neil, S. Dunn, V. D. Calhoun, G. Ruano, M. Kocherla, A.

Windemuth, B. A. Clementz, C. Tamminga, J. A. Sweeney, M. Keshavan, and G. D. Pearlson,

"Genetic Sources of Sub-components of Event-Related Potential in the Dimension of Psychosis

analyzed from the BSNIP Study," American Journal of Psychiatry, in press, PMC Journal - In

Process.

[29] J. Nomi, S. Gopal, D. R. Dajani, R. Steimke, E. Damaraju, S. Rachakonda, V. D. Calhoun, and L.

Q. Uddin, "Chronnectomic Patterns and Neural Flexibility Underlie Executive Function,"

NeuroImage, in press, PMC Journal - in process.

[30] G. D. Pearlson, J. Liu, and V. D. Calhoun, "An Introductory Review of Parallel Independent

Component Analysis (p-ICA) and a Guide to Applying p-ICA to Genetic Data and Imaging

Phenotypes to Identify Disease-Associated Biological Pathways and Systems in Common

Complex Disorders," Frontiers in Genetics: Statistical Genetics and Methodology, in press, PMC


[31] P. Rodriguez, M. Anderson, V. D. Calhoun, and T. Adalı, "General Non-unitary Constrained ICA

and its Application to Complex-valued fMRI Data," IEEE Trans Biomed Eng, in press, PMC


[32] C. Rodriquez, S. Davies, V. Calhoun, D. D. Savage, and D. A. Hamilton, "Moderate prenatal

ethanol exposure alters functional connectivity in the adult rat brain," Alcoholism: Clinical &

Experimental Research, in press, PMC Journal - in process.

[33] J. J. Shaffer, M. Peterson, M. McMahon, J. Bizzel, V. D. Calhoun, T. Van Erp, J. Ford, J.

Lauriello, K. O. Lim, D. S. Manoach, S. McEwen, D. Mathalon, D. O'Leary, S. Potkin, A. Preda,

J. Turner, J. Voyvodic, C. G. Wible, fBIRN, and A. Belger, "Fronto-striatal Activity Modulated

by Schizophrenia Negative Symptoms: Distinct Subtypes Impact Dissociable Brain Circuits,"

Molecular Neuropsychiatry, in press, PMC Journal - in process.

[34] V. Steele, J. Maurer, E. Bernat, V. Calhoun, and K. A. Kiehl, "Error-Related Processing in Adult

Males with Elevated Psychopathic Traits," Personality Disorders: Theory, Research, and

Treatment, in press, PMC Journal - In Process.

[35] V. Steele, V. Rao, V. D. Calhoun, and K. A. Kiehl, "Machine Learning of Structural Magnetic

Resonance Imaging Predicts Psychopathic Traits in Adolescent Offenders," NeuroImage, in

press, PMC Journal - in process.

[36] R. J. Thoma, A. Meier, J. M. Houck, V. Clark, J. D. Lewine, J. Turner, V. D. Calhoun, and J.

Stephen, "Diminished auditory sensory gating during active auditory verbal hallucinations,"

Schizophrenia Research, in press, PMC Journal - in process.

51


[37] M. Tursich, T. Ros, P. A. Frewen, R. C. Kluetsch, V. D. Calhoun, and R. Lanius, "Distinct

intrinsic network connectivity patterns of postraumatic stress disorder symptom clusters," Acta

Psychiatr Scand, in press, PMC Journal - In Process.

[38] T. Van Erp, D. P. Hibar, J. Rasmussen, D. C. Glahn, G. Pearlson, O. A. Andreassen, I. Agartz, L.

T. Weslye, U. K. Haukvik, A. M. Dale, C. B. Hartbert, O. Gruber, B. Kraemer, D. Zilles, G.

Donohoe, S. Kelly, C. McDonald, D. Morris, D. M. Cannon, A. Corvin, M. Machielsen, L.

Koenders, L. de Haan, D. J. Veltman, T. D. Satterthwaite, D. H. Wolf, R. C. Gur, R. E. Gur, S.

Potkin, D. Mathalon, B. Mueller, A. Preda, S. Ehrlich, E. Walton, J. Hass, V. D. Calhoun, H. J.

Bockholt, S. Sponheim, J. M. Shoemaker, N. E. Van Haren, H. E. Hulshoff Pol, R. A. Ophoff, R.

S. Kahn, R. Roiz-Santianez, B. Crespo-Facorro, L. Wang, K. I. Alpert, E. G. Jonsson, R.

Dimitrova, C. Bois, H. Whalley, A. M. McIntosh, S. Lawrie, R. Hashimoto, P. M. Thompson,

and J. T. Turner, "A Prospective Meta-Analysis Comparing Subcortical Brain Volume

Abnormalities in 2,028 Patients with Schizophrenia and 2,540 Healthy Controls via the ENIGMA

Consortium," Molecular Psychiatry, in press, PMC Journal - In Process.

[39] T. Van Erp, D. Greve, J. Rasmussen, J. Turner, V. D. Calhoun, S. Young, B. Mueller, G. Brown,

G. McCarthy, G. Glover, K. O. Lim, J. Bustillo, A. Belger, S. C. McEwen, J. Voyvodic, D.

Mathalon, D. Keator, A. Preda, D. D. Nguyen, J. M. Ford, S. Potkin, and FBIRN, "A multi-

Scanner study of subcortical brain volume abnormalities in schizophrenia," Psychiatry Research

Neuroimaging, in press, PMC Journal - In Process.

[40] T. Van Erp, A. Preda, J. Turner, S. Callahan, V. D. Calhoun, K. O. Lim, B. Mueller, G. Brown, J.

Bustillo, C. J. Vaidya, S. McEwen, J. Voyvodic, D. Mathalon, D. D. Nguyen, J. M. Ford, S.

Potkin, and FBIRN, "Neuropsychological Profile in Adult Schizophrenia Measured with the

CMINDS® Battery," Psychiatry Research, in press, PMC Journal - in process.

[41] V. Vergara, A. Mayer, E. Damaraju, K. Hutchison, and V. D. Calhoun, "The Effect of

Preprocessing Pipelines in Subject Classification and Detection of Abnormal Resting State

Functional Network Connectivity using Group ICA," NeuroImage, in press, PMC Journal - in

process.

[42] V. Vergara, J. Liu, E. Claus, K. Hutchison, and V. D. Calhoun, "Alterations of Resting State

Functional Network Connectivity in the Brain of Nicotine and Alcohol Users," NeuroImage, in

press, PMC Journal - in process.

[43] Z. Wang, S. Meda, M. Keshavan, C. Tamminga, J. Sweeney, B. A. Clementz, D. Schretlen, V. D.

Calhoun, I. E. Ivleva, G. Poudyal, S. Lui, E. Damaraju, and G. D. Pearlson, "Large scale fusion of

gray matter and resting-state functional MRI reveals common and shared biological markers

across the psychosis spectrum in the B-SNIP cohort," Frontiers in Psychiatry, section Affective

Disorders and Psychosomatic Research, in press, PMC Journal - in process.

[44] T. White, R. Muetzel, M. Schmidt, V. Jaddoe, A. Hofman, V. D. Calhoun, F. Verhulst, and H.

Tiemeier, "Time of Acquisition and Network Stability in Pediatric Resting-State Functional

MRI," Brain Connectivity, in press, PMC Journal - In Process.

[45] A. A. Willette, V. D. Calhoun, J. Egan, and D. Kapogiannis, "Multi-Modal Prognostic

Classification of AD Diagnostic Categories: MRI Independent Component Analysis and Other

Biomarkers," Psych.Res.Neuroimaging, in press, PMC Journal - In Process.

[46] P. D. Worhunsky, D. Matuskey, J. D. Gallezot, E. C. Gaiser, N. Nabulsi, G. A. Angarita, V. D.

Calhoun, R. T. Malison, and M. N. Potenza, "Regional and source-based patterns of [11C]-(+)-

PHNO binding potential reveal concurrent alterations in dopamine D2 and D3 receptor

availability in cocaine-use disorder," NeuroImage, in press, PMC Journal - in process.

[47] C. Wright, V. D. Calhoun, S. Ehrlich, L. Wang, J. Turner, and N. Perrone-Bizzozero, "Meta Gene

Set Enrichment Analyses Link miR-137-regulated Pathways with Schizophrenia Risk " Frontiers

in Genetics, in press, PMC Journal - In Process.

[48] C. Wright, C. Gupta, J. Chen, V. Patel, V. D. Calhoun, S. Ehrlich, L. Wang, J. Bustillo, N.

Perrone-Bizzozero, and J. Turner, "Polymorphisms in MIR137 and microRNA-137 regulated

52


genes influence gray matter structure in schizophrenia," Translational Psychiatry, in press, PMC

journal - in process.

[49] J. Xu, V. D. Calhoun, and M. N. Potenza, "The absence of task-related increases in BOLD signal

does not equate to absence of task-related brain activation," Journal of Neuroscience Methods, in

press, PMC Journal - In Process.

[50] J. Xu, M. N. Potenza, V. D. Calhoun, R. Zhang, S. Yip, J. T. Wall, G. D. Pearlson, P. D.

Worhunsky, and J. M. Moran, "Large-Scale functional network overlap is a general property of

brain functional organization: Reconciling inconsistent fMRI findings from general-linear-model-

based analyses," Neuroscience & Biobehavioral Reviews, in press, PMC Journal - in process.

[51] R. A. Yeo, D. Martinez, J. Pommy, S. Ehrlich, S. C. Schulz, B. C. Ho, J. Bustillo, and V. D.

Calhoun, "The impact of parent socioeconomic status on executive functioning and cortical

morphology in individuals with schizophrenia and healthy controls," Psychological Medicine, in


[52] C. Zhou, C. E. Zwilling, V. D. Calhoun, and M. Y. Wang, "Efficient Blockwise Permutation

Tests Preserving Exchangeability," International Journal of Statistics in Medical Research, in


Conference Publications (608 total)

[1] B. Reisfeld, S. Blackband, V. D. Calhoun, S. Grossman, and S. Eller, "Use of MRI for Tracking

Controlled Drug Release and Transport in the Brain," in Proc.SMRM, 1992, p. 1012.

[2] V. D. Calhoun, V. Truong, B. Reisfeld, J. Williams, and K. Leong, "Magnetic Resonance

Imaging of Active Targeting Using Immuno-Microspheres," in Proc.SMRM, 1993, p. 493.

[3] V. D. Calhoun, S. Kalyanasundaram, S. Eller, S. Grossman, and K. Leong, "3D T1 Mapping of a

Contrast Agent Concentration Gradient: Quantifying the Transport of an Intracranial Delivery of

Gd-DTPA to the Parenchyma of the Rabbit Brain," in Proc.SMRM, 1993, p. 630.

[4] S. Kalyanasundaram, B. Reisfeld, V. D. Calhoun, and K. Leong, "Polymeric Controlled Release

and Transport in the Brain - A Mathematical Model," in Proc.Controlled Release Society, 1993.

[5] S. Kalyanasundaram, V. D. Calhoun, and K. Leong, "Coupled Convective-Diffusive Mass

Transport in the Brain," in Proc.AICHE, 1994.

[6] V. D. Calhoun, T. Adalı, and G. D. Pearlson, "A frequency-space approach for motion correction

in fMRI," in Proc.IMDSP, 1998, p. 229.

[7] V. D. Calhoun, T. Adalı, M. Kraut, P. Rivkin, and G. D. Pearlson, "Visualizing Spatially

Distributed Hemodynamic Lag Times In Event-Related Functional MRI: Estimation Of A

Characteristic Visual "Impulse Response"," in Proc.EMBS, 1998, pp. 2124-2127.

[8] V. D. Calhoun and G. D. Pearlson, "Spatially-Distributed Lag Time Estimation In Event-Related

fMRI Via Adaptive Filtering," in Proc.BMES, 1998, p. 1110.

[9] S. Eleff, P. Rivkin, M. Grygorcewicz, V. D. Calhoun, Y. Chen, B. Chance, and G. D. Pearlson,

"A novel non-invasive phase modulated near-Infrared Imaging method demonstrates abnormal

cortical activation in schizophrenics during cognitive testing," in Proc.Soc.for Neuroscience,

1998.

[10] G. D. Pearlson, V. D. Calhoun, D. Wong, A. Marusic, M. Grygorcewicz, S. Nicastri, L. Ellison,

and T. E. Schlaepfer, "The Effects on Cerebral Blood Flow and Time Estimation " in

Proc.ACNP, 1998.

[11] G. D. Pearlson, T. E. Schlaepfer, A. Marusic, V. D. Calhoun, J. Brandt, and C. Lyketsos, "SPECT

RCBF Pattern and Prediction of 2-year cognitive outcome in early Alzheimer's Disease," in

Biological Psychiatry, 1998.

[12] V. D. Calhoun, T. Adalı, and G. D. Pearlson, "(Non)Stationarity Of Temporal Dynamics In

fMRI," in Proc.EMBS/BMES Joint Meeting, 1999, p. 1079.

[13] V. D. Calhoun, T. Adalı, and G. D. Pearlson, "Adaptive Filtering Of Visual Evoked Responses In

fMRI: Variability Of Response," in Proc.IASTED-SIP, 1999.

53


[14] M. Kraut, V. D. Calhoun, A. Mandir, L. Marsh, and G. D. Pearlson, "FMRI of Task-Timing

Related Activation Patterns in the Human Supplementary Motor Area," in Proc.RSNA, 1999.

[15] M. Kraut, V. D. Calhoun, and A. Mandir, "Regional Segregation of Task-Timing Related

Activation in Human Supplementary Motor Area, Studies by fMRI," in Proc.Soc.for

Neuroscience, 1999.

[16] S. Nicastri, V. D. Calhoun, G. D. Pearlson, C. A. Buchpiguel, A. S. Tanaka, M. C. Leite, and A.

G. Andrade, "Cortical Blood Flow Abnormalities in Cocaine-Dependent Individuals Evaluated by

Single Photon Emission Computed Tomography: A Method of Quantification," in Proc.NIDA,

1999.

[17] G. D. Pearlson, V. D. Calhoun, D. Wong, A. Marusic, M. Grygorcewicz, S. Nicastri, L. Ellison,

S. Dogun, M. Stephane, and T. E. Schlaepfer, "THC effects on cerebral blood flow and time

estimation," in Biological Psychiatry, 1999.

[18] L. Amodei, V. D. Calhoun, C. Radu, S. Mori, P. E. Barta, and G. D. Pearlson, "Differences in

white matter connectivity in men and women with and without schizophrenia," in Biological

Psychiatry, 2000.

[19] V. D. Calhoun, M. Kraut, T. Adalı, and G. D. Pearlson, "A Weighted-Least Squares method for

latency estimation in fMRI," in Proc.ISMRM, 2000, p. 814.

[20] V. D. Calhoun, X. Golay, and G. D. Pearlson, "Improved fMRI Slice Timing Correction:

Interpolation Errors and Wrap Around Effects," in Proc.ISMRM, 2000, p. 810.

[21] V. D. Calhoun and G. D. Pearlson, "The brain as a black-box?: ER-fMRI latency estimation of

interleaved responses to short visual, auditory, and motor stimuli," in Proc.ISMRM, 2000, p. 983.

[22] V. D. Calhoun and J. J. Pekar, "Where and Where are Components Independent? On the

applicability of spatial- and temporal- ICA to functional MRI Data," in NeuroImage, 2000, p.

S682.

[23] V. D. Calhoun, V. McGinty, T. Watson, and G. D. Pearlson, "Insights Into Functional

Connectivity During A Driving Simulation Before And After Effects Of Marinol Intoxication On

FMRI Activation And Cognitive Performance " in Proc.ACNP, 2000.

[24] M. Kraut, V. D. Calhoun, J. B. Segal, and J. Hart, "Functional MRI of Word Association and the

Search for Word Meaning," in Radiology, 2000.

[25] S. Nicastri, V. D. Calhoun, G. D. Pearlson, C. A. Buchpiguel, A. S. Tanaka, M. C. Leite, and A.

G. Andrade, "Cortical Blood Flow Abnormalities in Cocaine-Dependent Individuals Evaluated by

Single Photon Emission Computed Tomography: A Method of Quantification," in Proc.CPDD,

2000.

[26] D. M. Yousem, M. A. Kraut, R. J. Geckle, A. S. Mandir, V. D. Calhoun, and G. D. Pearlson,

"Effect of Age on motor, visual, and visuomotor fMRI tasks," in Radiology, 2000.

[27] V. D. Calhoun, T. Adalı, and G. D. Pearlson, "Independent Components Analysis Applied To

fMRI Data: A Natural Model And Order Selection," in Proc.NSIP, 2001.

[28] V. D. Calhoun, J. J. Pekar, T. Adalı, and G. D. Pearlson, "fMRI Of Visual Perception: Networks

Identified By SPM And Independent Component Analysis," in Proc.ISMRM, 2001, p. 1742.

[29] V. D. Calhoun, J. J. Pekar, T. Adalı, and G. D. Pearlson, "An fMRI Analysis of Driving-Related

Networks with Independent Component Analysis Applied in a Between-Condition (BC-ICA) and

Within-Condition (WC-ICA) Manner," in Proc.ISMRM, 2001, p. 668.

[30] V. D. Calhoun, V. McGinty, J. J. Pekar, T. Watson, and G. D. Pearlson, "Investigation of Marinol

(THC) Effects upon fMRI Activation During Active and Passive Driving Using Independent

Component Analysis and SPM," in NeuroImage, 2001, p. S388.

[31] V. D. Calhoun, T. Adalı, G. D. Pearlson, and J. J. Pekar, "A Method for Making Group

Inferences Using Independent Component Analysis of Functional MRI Data: Exploring the

Visual System," in NeuroImage, 2001, p. S88.

[32] V. D. Calhoun, T. Adalı, and G. D. Pearlson, "Independent Components Analysis Applied to

fMRI Data: A Generative Model for Validating Results," in Proc.NNSP, 2001.

54


[33] V. D. Calhoun, T. Adalı, G. D. Pearlson, and J. J. Pekar, "Group ICA of Functional MRI Data:

Separability, Stationarity, and Inference," in Proc.Int.Conf.on ICA and BSS, 2001, pp. 155-160.

[34] V. D. Calhoun, V. McGinty, and G. D. Pearlson, "Driving and the Brain: An Imaging Study," in

Proc.Human Centered Trans.Sim.Conf., 2001.

[35] A. Horska, V. D. Calhoun, and P. B. Barker, "A Rapid Method for Correction of CSF Partial

Volume in Quantitative Proton MR Spectroscopic Imaging," in Proc.ISMRM, 2001, p. 216.

[36] Y. Matsuyama and S. Imahara, "Independent Component Analysis by Convex Divergence

Minimization: Applications to Brain fMRI Analysis " in Int.Joint.Conf.on Neural Netw., 2001,

pp. 412-417.

[37] V. B. McGinty, R. A. Shih, E. S. Garrett, V. D. Calhoun, and G. D. Pearlson, "Assessment of

Intoxicated Driving with a Simulator: A Validation Study with on Road Driving," in Proc.Human

Centered Trans.Sim.Conf., 2001, pp. 11-19.

[38] S. Mostofsky, M. Abrams, S. Arnold, Y. Choe, V. D. Calhoun, and J. J. Pekar, "Functional MRI

Examination of Motor Response Inhibition," in Proc.INS, 2001.

[39] G. D. Pearlson, J. R. Depaulo, J. B. Potash, H. Strasser, P. E. Barta, V. D. Calhoun, K. O. Yates,

P. Rivkin, A. Pulver, E. Miller, and D. Schretlen, "Schizophrenia and psychotic affective

disorder: anatomic overlay? ," in Biological Psychiatry, 2001.

[40] J. J. Pekar, V. D. Calhoun, T. Adalı, and G. D. Pearlson, "Spatial & Temporal Independent

Component Analysis of fMRI Data with Two Task-Related Waveforms," in Proc.ISMRM, 2001,

p. 24.

[41] P. Rivkin, J. Hart, V. D. Calhoun, and G. D. Pearlson, "Functional MRI and Formal Thought

Disorder," in Biological Psychiatry, 2001.

[42] K. O. Yates, H. M. Morris, H. Strasser, N. A. Honeycutt, D. Schretlen, P. Barta, J. Anthony, V.

D. Calhoun, and G. D. Pearlson, "Linear Regression Model Based on Age- and Sex-Related

Increase in MRI Volumes of Ventricles," in Proc.SBP, 2001.

[43] V. D. Calhoun, T. Adalı, G. D. Pearlson, and J. J. Pekar, "On Complex Infomax Applied to

Complex fMRI Data," in Proc.ICASSP, 2002.

[44] V. D. Calhoun and G. D. Pearlson, "Using Independent Component Analysis To Study Complex

Behaviors With fMRI: Application to Studies of Simulated Driving," in Society of Biological

Psychiatry, 2002.

[45] V. D. Calhoun, T. Adalı, J. J. Pekar, and G. D. Pearlson, "Independent Component Analysis

Facilitates fMRI of an Naturalistic Behavior: Hypothesized Neural Substrates of Simulated

Driving," in Proc.ISMRM, 2002.

[46] V. D. Calhoun, T. Adalı, G. D. Pearlson, P. C. M. van Zijl, and J. J. Pekar, "Independent

Component Analysis of fMRI Data in the Complex Domain," in Proc.ISMRM, 2002.

[47] V. D. Calhoun, T. Adalı, G. D. Pearlson, and J. J. Pekar, "An Infomax Method for Performing

ICA of fMRI Data in the Complex Domain," in Proc.HBM, 2002.

[48] V. D. Calhoun, T. Adalı, G. D. Pearlson, and J. J. Pekar, "A Generative Approach to Validation

and Evaluation of Independent Component Analyses of fMRI Data," in Proc.HBM, 2002.

[49] V. D. Calhoun and G. D. Pearlson, "Novel Means for Designing, Analyzing and Interpreting

Functional MRI Studies," in Society of Biological Psychiatry, 2002.

[50] V. D. Calhoun and T. Adalı, "Complex Infomax: Convergence and Approximation of Infomax

with Complex Nonlinearities," in Proc.NNSP, 2002.

[51] V. D. Calhoun, V. McGinty, R. A. Shih, D. Altschul, D. Scott, J. Shaikh, and G. D. Pearlson,

"Intoxication Effects on fMRI Studies of Simulated Driving," in Proc.ACNP, 2002.

[52] A. Horska, M. A. Jacobs, V. D. Calhoun, and P. B. Barker, "A Rapid Method for Brain Tissue

Segmentation " in Proc.RSNA, 2002.

[53] J. Kim, R. Kanaan, V. D. Calhoun, S. Mori, and G. D. Pearlson, "More Averages vs. More

Gradients: Which is Right for Reliable Diffusion Tensor MRI?," in Proc.RSNA, 2002.

55


[54] J. T. Little, G. S. Smith, C. C. Meltzer, B. Mulsant, B. G. Pollock, M. D. Miller, V. D. Calhoun,

G. D. Pearlson, and C. F. Reynold, "Cerebral metabolic change with paroxetine treatment in

geriatric depression," in Am.J.Geriatric Psych., 2002, pp. 73-74.

[55] S. Mostofsky, M. Abrams, M. Goldberg, J. Schafer, J. J. Pekar, S. M. Courtney, V. D. Calhoun,

M. Kraut, and M. Denckla, "Supplementary Motor Area in Motor Response Inhibition and

Preparation: Evidence From an fMRI Study of a Go/No-go Task," in Proc.Amer.Acad.of Neur.,

2002.

[56] H. Strasser, N. A. Honeycutt, D. Schretlen, J. R. Depaulo, A. Pulver, J. Anthony, R. Hopokins, P.

Barta, V. D. Calhoun, E. Miller, and G. D. Pearlson, "Amygdala volumes in psychotic and

nonpsychotic bipolars and schizophrenia," in Society of Biological Psychiatry, 2002.

[57] R. Arya, S. Roys, V. D. Calhoun, T. Adalı, J. Greenspan, and R. Gullapali, "Distance Measure for

Ranking Spatial ICA Component of Functional MRI Data," in Proc.ISMRM, 2003.

[58] V. D. Calhoun, D. Altschul, V. McGinty, and G. D. Pearlson, "Alcohol Intoxication Effects on A

Driving-Related Visual Perception Task: An fMRI Study," in Society of Biological Psychiatry,

2003.

[59] V. D. Calhoun, T. Adalı, G. D. Pearlson, and J. J. Pekar, "A Method for Testing Conjunctive and

Subtractive Hypotheses on Group fMRI Data Using Independent Component Analysis," in

Proc.ISMRM, 2003.

[60] V. D. Calhoun, T. Adalı, J. J. Pekar, and G. D. Pearlson, "Independent Component Analysis of

fMRI Power Spectra: Spatial Grouping and Latency Estimation," in Proc.ISMRM, 2003.

[61] V. D. Calhoun, J. Kim, and G. D. Pearlson, "fMRI Connectivity Measured by Mutual Information

and Correlation: Linear Dependence vs. General Dependence," in Proc.ISMRM, 2003.

[62] V. D. Calhoun, D. Scott, D. Altschul, R. A. Shih, and G. D. Pearlson, "Alcohol Intoxication

Effects on A Visual Perception Task: An fMRI Study," in Proc.ISMRM, 2003.

[63] V. D. Calhoun and T. Adalı, "Complex ICA for fMRI Analysis: Performance of Several

Approaches," in Proc.ICASSP, 2003.

[64] V. D. Calhoun, T. Adalı, J. C. Hansen, J. Larsen, and J. J. Pekar, "ICA of fMRI: An Overview,"

in Proc.Int.Conf.on ICA and BSS, 2003.

[65] V. D. Calhoun, K. A. Kiehl, K. A. Kiehl, P. F. Liddle, and G. D. Pearlson, "Aberrant Localization

of Synchronous fMRI Activity in Temporal Auditory Cortex Reliably Characterizes

Schizophrenia," in Proc.Int.Cong.on Schiz.Res., Colorado Springs, CO, 2003.

[66] V. D. Calhoun, T. Adalı, J. J. Pekar, and G. D. Pearlson, "Latency (in)sensitive Group

Independent Component Analysis of fMRI Data in the Temporal Frequency Domain," in

Proc.HBM, 2003.

[67] V. D. Calhoun, K. A. Kiehl, P. F. Liddle, and G. D. Pearlson, "Aberrant Localization of Temporal

Lobe Auditory Cortex Synchronous fMRI Activity Reliably Characterizes Schizophrenia," in

Proc.HBM, 2003.

[68] V. D. Calhoun, P. Rivkin, and G. D. Pearlson, "Synchronous Auditory Cortex Fluctuations in

Schizophrenia: An fMRI Study," in Society of Biological Psychiatry, 2003.

[69] V. D. Calhoun and G. D. Pearlson, "A Novel Approach for Investigative Dose-Response and

Case-Control Changes in Multiple Spatially-Independent Networks: Applications to fMRI of

Simulated Driving and Alcohol," in Proc.ACNP, 2003.

[70] E. Egolf and V. D. Calhoun, "Group ICA of fMRI Toolbox," in Proc.Biomedical Engineering

Alliance and Consortium, Hartford, CT 2003.

[71] E. Formisano, V. D. Calhoun, N. van Atteveldt, F. Esposito, F. Di Salle, J. J. Pekar, and R.

Goebel, "Analysis of group fMRI data with cortex-based intersubject alignment and independent

component analysis," in Proc.HBM, Sendai, Japan, 2003.

[72] A. Horska, M. A. Jacobs, V. D. Calhoun, A. Arslanoglu, and P. B. Barker, "A Fast Method for

Image Segmentation: Application to Quantitative Proton MRSI at 3 Tesla," in Proc.ISMRM,

2003.

56


[73] J. Kim, V. D. Calhoun, and G. D. Pearlson, "3D Visualization of White Matter Tracts Using

LIC," in Proc.ASNR, 2003.

[74] J. Kim, V. D. Calhoun, and G. D. Pearlson, "DTI of Huntington Disease," in Proc.ISMRM, 2003.

[75] J. Kim and V. D. Calhoun, "Evaluation of Quantization Error in DICOM images for fMRI

Application," in Proc.RSNA, 2003.

[76] M. Noureldin, D. M. Yousem, A. Tekes, N. Browner, and V. D. Calhoun, "Correlation between

the amplitude of cortical activation and reaction time: An fMRI Study " in Proc.ASNR, 2003.

[77] G. D. Pearlson, K. A. Kiehl, P. F. Liddle, and V. D. Calhoun, "Abberant Localization of Auditory

Cortex Synchronous Hemodynamic Activity Reliably Characterizes Schizophrenia," in

Proc.ACNP, 2003.

[78] T. Adalı, T. Kim, and V. D. Calhoun, "Independent Component Analysis By Complex

Nonlinearities," in Proc.ICASSP, 2004, pp. 525-528.

[79] M. Assaf, C. Kuzu, P. Rivkin, V. D. Calhoun, J. Hart, Jr., M. Kraut, M. Yassa, and G. D.

Pearlson, "fMRI Evidence for Abnormal Semantic Processing in Schizophrenia " in Proc.SBP,

New York, NY, 2004.

[80] V. D. Calhoun and G. D. Pearlson, "Intoxication Effects on fMRI Studies of Simulated Driving:

ICA Reveals Disruption in Synchronous Networks," in Proc.ICANA, 2004.

[81] V. D. Calhoun, "Intoxication effects on fMRI studies of simulated driving reveals disruption in

specific synchronous networks," in Proc.SBP, New York, NY, 2004.

[82] V. D. Calhoun, T. Adalı, and Y. Li, "Independent component anlaysis of complex-valued

functional magnetic resonance imaging data by complex nonlinearities," in Proc.ISBI, 2004, pp.

984-987.

[83] V. D. Calhoun, K. A. Kiehl, and G. D. Pearlson, "Are two tasks better than one?: Multi-task

coupling of fMRI independent sources in schizophrenia," in Proc.Int.Cong.on Schiz.Res., 2004.

[84] K. Celone, V. D. Calhoun, A. Driscoll, E. Rand-Giovannetti, E. Chua, B. Dickerson, M. Albert,

D. Blacker, and R. Sperling, "ICA of fMRI Associative Memory Networks in Normal Aging,

MCI and Mild AD," in Proc.Soc.for Neuroscience, 2004.

[85] E. Egolf, K. A. Kiehl, and V. D. Calhoun, "Group ICA of fMRI Toolbox (GIFT)," in Proc.HBM,

2004.

[86] T. Franklin, V. D. Calhoun, K. A. Kiehl, J. A. Gray, N. Sciortino, and A. R. Childress, "An

Independent component analysis of BOLD fMRI to cigarette stimuli: Identifying the brain

regions that act as a functional unit in response to smoking cues " in Proc.SRNT, 2004.

[87] N. Giuliani, G. D. Pearlson, and V. D. Calhoun, "Alcohol Versus Marinol Intoxication Effects on

Visual Perception: An fMRI Study," in Proc.ICANA, 2004.

[88] M. P. Hejnar, M. M. Kurtz, K. A. Keihl, G. D. Pearlson, and V. D. Calhoun, "Performance on the

Penn Conditional Exclusion Task (PCET) in Patients with Schizophrenia (SZ) and Healthy

Controls: An fMRI Analysis " in Proc.SBP, New York, NY, 2004.

[89] B. Hong and V. D. Calhoun, "On an Adaptive ICA Method with Application to Biomedical

Image Analysis," in Seventh International Conference on Signal Processing, 2004.

[90] B. Hong and V. D. Calhoun, "Source Density Driven Adaptive Independent Component Analysis

Approach for fMRI Signal Analysis " in Proc.MLSP, San Paulo, Brazil, 2004.

[91] B. Hong, G. D. Pearlson, E. Egolf, and V. D. Calhoun, "Identification of Brain Activity in a

Visual Stimulation Task - An Adaptive ICA Approach for fMRI Data " in Proc.HBM, Budapest,

Hungary, 2004.

[92] K. A. Kiehl, M. Stevens, K. R. Laurens, G. D. Pearlson, V. D. Calhoun, and P. F. Liddle, "The

Amygdala as a salience detector: Evidence from a large-scale study (N=100) of auditory target

detection " in Proc.HBM, Budapest, Hungary, 2004.

[93] C. Kuzu, P. Rivkin, G. D. Pearlson, J. Hart, Jr., V. D. Calhoun, M. Kraut, M. Yassa, and M.

Assaf, "fMRI activation during a feature-binding semantic task in schizophrenia," in Proc.APA,

New York, NY 2004.

57


[94] Y. Li, T. Adalı, and V. D. Calhoun, "Independent component analysis with feature selective

filtering," in Proc.MLSP, 2004.

[95] M. A. Mohamed, D. M. Yousem, I. Kusevic, V. D. Calhoun, C. Cristinzio, N. A. Honeycutt, A.

El-Deib, M. Yassa, B. Caffo, and S. Basset, "Lack of Education Effect on Brain Activity in a

Memory Based Functional MRI Experiment," in Proc.ASNR, 2004.

[96] P. Rivkin, M. Yassa, J. Hart, Jr., M. Kraut, R. Kanaan, V. D. Calhoun, and G. D. Pearlson,

"Abnormal rCBF activatgion in schizophrenic individuals during a semantic feature-binding task

" in Proc.SBP, New York, NY, 2004.

[97] A. Tekes, V. D. Calhoun, M. A. Mohamed, B. Yagmurlu, N. Mikhelashvili-Browner, and D. M.

Yousem, "Effect of age in volume of activation in block design and single-event paradigms using

visuomotor functional MR imaging," in Proc.ASNR, 2004.

[98] A. Tekes, M. A. Mohamed, N. Mikhelashvili-Browner, V. D. Calhoun, and D. M. Yousem,

"Effect of age on visuomotor functional MR Imaging," in Proc.ASNR, 2004.

[99] V. D. Calhoun, T. Adalı, K. A. Kiehl, R. S. Astur, J. J. Pekar, and G. D. Pearlson, "Are two tasks

better than one?: Multi-task coupling of fMRI independent sources in schizophrenia," in

Proc.ISMRM, 2005.

[100] V. D. Calhoun, T. Adalı, J. Pekar, and K. A. Kiehl, "Semi-blind ICA of fMRI: A method for

utilizing hypothesis-derived time courses in a spatial ICA analysis," in Proc.ISMRM, 2005.

[101] V. D. Calhoun, T. Adalı, and J. Pekar, "Semi-blind ICA of fMRI: A Method for Utilizing

Hypothesis-Derived Time Courses in A Spatial ICA Analysis," in NeuroImage, 2005.

[102] V. D. Calhoun, K. A. Keihl, and G. D. Pearlson, "A Method for Multi-task fMRI Data Fusion

Applied to Schizophrenia," in NeuroImage, 2005.

[103] V. D. Calhoun, K. A. Keihl, and G. D. Pearlson, "A Method for Multi-task fMRI Data Fusion

Applied to Schizophrenia," in Proc.SBP, 2005.

[104] V. D. Calhoun, T. Adalı, K. A. Kiehl, and G. D. Pearlson, "Neuronal Chronometry Of Target

Detection: Fusion Of Hemodynamic And Event-related Potential Data," in Proc.MLSP, 2005.

[105] N. Correa, T. Adalı, Y. Li, and V. D. Calhoun, "Comparison of blind source separation

algorithms for fMRI using a new matlab toolbox: GIFT," in Proc.IEEE Int.Conf.Acoustics,

Speech, Signal Processing (ICASSP), Philadelphia, PA, 2005.

[106] N. Giuliani, V. D. Calhoun, and W. Cunningham, "Similarities between evaluative and non-

evaluative judgments: A pluralistic fMRI analysis using SPM and Semi-blind ICA," in Proc.CNS,

2005.

[107] K. Groth, T. Benios, N. Giuliani, V. D. Calhoun, and G. D. Pearlson, "General Intelligence

Correlates to Brain Structure Differently in Men and Women," in Proc.SAGE IV, 2005.

[108] C. C. Hong, V. D. Calhoun, and J. J. Pekar, "REM sleep eye movements are associated with

oculomotor circuit activation and periventricular deactivation," in Proc.ISMRM, 2005.

[109] M. R. Johnson, N. Morris, R. S. Astur, V. D. Calhoun, K. A. Kiehl, and G. D. Pearlson,

"Schizophrenia and Working Memory: A Closer Look at fMRI of the Dorsolateral Prefrontal

Cortex During a Working Memory Task," in Proc.CNS, 2005.

[110] Y. Li, T. Adalı, and V. D. Calhoun, "Feature-selective ICA and its convergence properties," in

Proc.IEEE Int.Conf.Acoustics, Speech, Signal Processing (ICASSP), 2005.

[111] K. McKiernan, M. Fujimoto, K. March, V. D. Calhoun, and G. D. Pearlson, "Independent

Component Analysis Identifies a Resting State Neural Network in Healthy Adults," in Proc.CNS,

2005.

[112] R. Mutihac, J. G. Schafer, C. K. Jones, B. A. Chodkowski, J. Gillen, S. Mostofsky, A. Boyce, M.

Goldberg, M. B. Denckla, S. M. Courtney, M. Kraut, V. D. Calhoun, T. Adalı, and J. J. Pekar,

"Listening to the Scanner: Modulation of Auditory Perception During Visuo-Motor fMRI," in

Proc.ISMRM, 2005.

[113] H. Snoussi and V. D. Calhoun, "Bayesian Blind Source Separation for Brain Imaging," in

Proc.ICIP, 2005.

58


[114] H. Snoussi and V. D. Calhoun, "Bayesian Blind Source Separation for Brain Imaging," in

Proc.SETIT, 2005.

[115] M. Stevens, K. A. Kiehl, G. D. Pearlson, and V. D. Calhoun, "Functional neural circuits for

mental timekeeping," in Human Brain Mapping, Florence, Italy, 2005.

[116] J. Bentwich, A. Caparelli, C. E. Foerster, B. Maletic-Savatich, V. D. Calhoun, and H. Benveniste,

"'More' may be 'less': deficient dichotic listening performance in hfa is associated with

hyperactivation of bilateral language brain areas," in Proc.ISMRM, 2006.

[117] J. Bentwich, A. Caparelli, C. E. Foerster, B. Maletic-Savatich, V. D. Calhoun, and H. Benveniste,

"'More' may be 'less': deficient dichotic listening performance in hfa is associated with

hyperactivation of bilateral language brain areas," in Proc.IMFAR, 2006.

[118] V. D. Calhoun and T. Adalı, "Fusion of Multisubject Functional MRI and Event-Related Potential

Data Using Independent Component Analysis," in Proc.ICASSP, 2006.

[119] V. D. Calhoun, "A Feature-based Approach to Combine Multimodal Brain Imaging Data," in

Proc.ISMRM, Seattle, WA, 2006.

[120] V. D. Calhoun, T. Adalı, and J. Liu, "A Feature-based Approach to Combine Functional MRI,

Structural MRI, and EEG Brain Imaging Data," in Proc.EMBS, 2006.

[121] V. D. Calhoun, T. Adalı, K. A. Kiehl, and G. D. Pearlson, "Classification of Schizophrenia and

Bipolar Disorder using Temporally Coherent Functional Networks," in Proc.ACNP, 2006.

[122] T. Eichele, M. Moosmann, V. D. Calhoun, K. Specht, H. Nordby, and K. Hugdahl, "Joint ICA of

Simultaneous Single Trial ERP-fMRI," in Proc.HBM, 2006.


functional connectivity of the 'default mode' in schizophrenia," in Trinity Papers, 2006.


functional connectivity of the 'default mode' in schizophrenia," in Neuron, 2006.

[125] M. Jafri and V. D. Calhoun, "Functional Classification of Schizophrenia Using Feed Forward

Neural Networks," in Proc.EMBS, 2006.

[126] Y. Li, T. Adalı, and V. D. Calhoun, "Sample Dependence Correction For Order Selection In

fMRI Analysis," in Proc.ISBI, 2006.

[127] D. H. Mathalon, K. A. Kiehl, V. D. Calhoun, T. McGlashan, G. D. Pearlson, and S. W. Woods,

"Abnormal fronto-temporal cortical activation during fMRI attention and working memory tasks

in prodromal and early illness patients with schizophrenia," in Proc.ACNP, 2006.

[128] G. D. Pearlson, D. A. Wallace, V. D. Calhoun, M. Assaf, M. C. Stevens, S. Meda, and J.

Gelernter, "Alpha7 nicotinic cholinergic receptor (CHRNA7)polymorphisms discriminate figural

memory abilities in healthy adults and influence related structural and functional MRI patterns,"

in Proc.ACNP, 2006.

[129] Q. Wang, V. Megalooikonomou, D. Kontos, M. Erickson, and V. D. Calhoun, "Similarity

Searches in Brain Image Databases," in Proc.HBM, 2006.

[130] A. J. Allen, S. Meda, R. Astur, V. D. Calhoun, K. Ruopp, B. Cuadra, and G. D. Pearlson, "Effect

of alcohol on performance on visual oddball task: an fMRI study," in Proc.ICANA, 2007.

[131] M. Assaf, M. Johnson, R. Schultz, R. Sahl, V. D. Calhoun, T. Hendler, and G. D. Pearlson,

"Abnormal Brain Activation During Implicit Mentalization in Autism Spectrum," in Society of

Biological Psychiatry, 2007.

[132] G. K. Beatty, R. A. Anderson, W. Kodituwakku, V. D. Calhoun, and V. P. Clark, "Response time

variability and fMRI signal changes during a cognitive inteference task in stimulant dependent

patients," in Proc. Society for Neuroscience, San Diego, CA, 2007.

[133] M. Benavidez, V. P. Clark, G. Kuperberg, K. Lim, and V. D. Calhoun, "Functional Networks

Identified in an Auditory Oddball Task of Chronic and First Episode Schizophrenia Patients

(N=261) Collected from the MIND Clinical Imaging Consortium," in Proc. Society for

Neuroscience, San Diego, CA, 2007.

[134] H. J. Bockholt, J. Turner, D. L. Johnson, V. D. Calhoun, D. N. Greve, A. W. Toga, C. G. Wible,

K. Lim, B. Mueller, J. Lauriello, D. S. O'Leary, G. H. Glover, J. T. Voyvodic, G. McCarthy, J. M.

59


Ford, S. Potkin, and FBIRN, "Morphometric analysis of a multi-site study of schizophrenia using

freesurfer," in Proc. Society for Neuroscience, San Diego, CA, 2007.

[135] V. D. Calhoun, G. D. Pearlson, P. Maciejewski, and K. A. Kiehl, "Use of Hemodynamic Brain

Modes vs Conventional fMRI Analysis and Structural Brain Measures In Schizophrenia and

Bipolar Disorder," in Proc. ICOSR, 2007.

[136] V. D. Calhoun, R. Silva, and J. Liu, "Identification of Multimodal MRI and EEG Biomarkers

Using Joint-ICA and Divergence Criteria," in Proc.MLSP, 2007.

[137] V. P. Clark, D. S. Manoach, R. L. Gollub, B. C. Ho, K. Lim, J. Burge, T. Lane, P. Lesnik, V. D.

Calhoun, and N. C. Andreasen, "A Multi-site fMRI Study of Schizophrenia: Effects of Illness

type and Duration on Brain Function and Connectivity," in Proc. ICOSR, 2007.

[138] K. P. Cosgrove, J. K. Staley, F. Wang, V. D. Calhoun, I. L. Petrakis, E. Perry, E. Frohlich, E.

Ruff, H. P. Blumberg, and J. Krystal, "Decreased gray and white matter volume in alcohol

dependent subjects: a voxel based morphometry study," in Proc.ICANA, 2007.

[139] O. Demirci and V. D. Calhoun, "Detection of Schizophrenia using fMRI Data via Projection

Pursuit," in Proc.MLSP, 2007.

[140] R. L. Gollub, D. S. Manoach, J. Fries, M. Vangel, T. White, N. C. Andreasen, and V. D. Calhoun,

"Multi-site fMRI study of DLPFC activation differences between subjects with schizophrenia and

controls," in Proc. Society for Neuroscience, San Diego, CA, 2007.

[141] M. Jafri, G. D. Pearlson, and V. D. Calhoun, "A maximal-correlation approach using ICA for

testing functional network connectivity applied to Schizophrenia," in Proc.ISBI, 2007.

[142] M. Jafri and V. D. Calhoun, "Interdependencies among Resting-State networks in Schizophrenia

using Independent Component Analysis," in Proc.ISMRM, 2007.

[143] M. Jafri, G. D. Pearlson, and V. D. Calhoun, "Resting State Functional Network Connectivity

among ICA Components using Bayesian Networks," in Proc.HBM, 2007.

[144] Y. Li, T. Adalı, and V. D. Calhoun, "A Model For Comparison Of Two Functional MRI Datasets

By Canonical Correlation Analysis And Independent Component Analysis," in Proc.MLSP, 2007.

[145] Y. Li, W. Wang, T. Adalı, and V. D. Calhoun, "CCA for Joint Blind Source Separation of

Multiple Datasets with Application to Group fMRI Analysis," in Proc.MLSP, 2007.

[146] Y. Li, T. Adalı, and V. Calhoun, "A multivariate model for comparison of two datasets and its

application to fMRI analysis," in Proc.MLSP, 2007.

[147] J. Liu, G. D. Pearlson, V. D. Calhoun, and A. Windemuth, "A novel approach to analyzing fMRI

and SNP data via parallel independent component analysis," in Proc.SPIE, San Diego, CA, 2007,

pp. 1301-1311.

[148] J. Liu and V. D. Calhoun, "Parallel independent component analysis for multimodal analysis:

Application to fMRI and EEG Data," in Proc.ISBI, Washington, D. C., 2007, pp. 1028-1031.

[149] J. Liu, G. D. Pearlson, and V. D. Calhoun, "Investigation of Multiple Brain Imaging and Genetic

Modalities via Parallel Independent Component Analysis," in Proc. HBM, Chicago, Il, 2007.

[150] G. Machado, M. Juarez, V. P. Clark, R. L. Gollub, V. Magnotta, T. White, and V. D. Calhoun,

"Probing Schizophrenia With A Sensorimotor Task: Large-Scale (N=273) Independent

Component Analysis Of First Episode And Chronic Schizophrenia Patients," in Proc. Society for


[151] S. Meda, J. R. Gruen, V. D. Calhoun, J. Gelernter, and G. D. Pearlson, "Single Nucleotide

Polymorphism in DCDC2 affects Brain Morphology -A Voxel Based Morphometric Study," in

Proc.ISMRM, 2007.

[152] J. Roffmann, R. L. Gollub, D. S. Manoach, and V. Calhoun, "Interactive effects of MTHFS

C677T and COMT Val158Met on executive function and prefrontal activation in schizophrenia,"

in Proc.SIRS, 2007.

[153] P. Skudlarski, V. D. Calhoun, and G. D. Pearlson, "Disruption of connectivity in schizophrenia

measured by Diffusion Tensor Imaging fiber tracking and resting correlation," in Proc. HBM,

2007.

60


[154] M. Stevens, K. A. Kiehl, G. D. Pearlson, and V. D. Calhoun, "Functional neural networks

underlying response inhibition in adolescents and adults," in Human Brain Mapping, 2007.

[155] T. Van Erp, J. B. Segall, J. Turner, D. N. Greve, A. W. Toga, C. G. Wible, K. Lim, B. Mueller, J.

Lauriello, D. S. O'Leary, G. H. Glover, G. Brown, J. T. Voyvodic, G. McCarthy, S. Potkin, and

V. D. Calhoun, "Voxel-Based Morphometric analysis of a multi-site study on schizophrenia," in

Proc. Society for Neuroscience, San Diego, CA, 2007.

[156] L. Xu, J. Liu, and V. D. Calhoun, "Functional Connectivity Among Spatially Independent Brain

Regions During a VR Task," in Proc. HBM, Chicago, Il, 2007.

[157] A. J. Allen, S. Meda, R. Astur, V. D. Calhoun, P. Skudlarski, and G. D. Pearlson, "Effect of

alcohol on performance on secondary task while driving," in Proc. CNS, 2008.

[158] H. J. Bockholt, J. Ling, M. Scully, A. Scott, S. Lane, V. Magnotta, T. White, K. Lim, R. L.

Gollub, and V. D. Calhoun, "Real-time Web-scale Image Annotation for Semantic-based

Retrieval of Neuropsychiatric Research Images," in Proc.HBM, 2008.

[159] H. J. Bockholt, S. Williams, M. Scully, V. Magnotta, R. L. Gollub, J. Lauriello, K. Lim, T.

White, R. Jung, S. C. Schulz, N. C. Andreasen, and V. D. Calhoun, "The MIND Clinical Imaging

Consortium as an application for novel comprehensive quality assurance procedures in a multi-

site heterogeneous clinical research study," in Proc.HBM, 2008.

[160] G. Book, K. A. Kiehl, V. D. Calhoun, M. Stevens, and G. D. Pearlson, "Fusion of fMRI and the

Pupil Response During an Auditory Oddball Task," in Proc. CNS, Portland, OR, 2008.

[161] V. D. Calhoun, "Does the Brain Rest?: An Independent Component Analysis of Temporally

Coherent Brain Networks at Rest and During a Cognitive Task," in Proc. IEEE SSIAI, Santa Fe,

NM, 2008.

[162] V. D. Calhoun, K. A. Kiehl, G. D. Pearlson, and J. Liu, "Moving Beyond Single Candidate

Genes: A Parallel ICA Approach for Joint Analysis of SNP, fMRI, and ERP Data," in

Proc.ACNP, Scotsdale, AZ, 2008.

[163] A. Caprihan, G. Pearlson, and V. Calhoun, "Discriminatory PCA applied to Schizophrenia DTI

Data," in Proc.ISMRM, Toronto, Canada, 2008.

[164] V. P. Clark, G. K. Beatty, R. E. Anderson, P. Kodituwakku, V. D. Calhoun, and J. Phillips,

"FMRI Activity in Cingulate and insular cortex predicts relaps in recovering stimulant addicts,"

in Proc. Society for Neuroscience, San Diego, CA, 2008.

[165] N. Correa, T. Adalı, Y. Li, and V. D. Calhoun, "Examining associations between fMRI and EEG

data using canonical correlation analysis," in Proc. ISBI, Washington, D.C., 2008, pp. 1251-1254.

[166] T. Eichele, S. Debener, V. Calhoun, K. Specht, A. K. Engel, K. Hugdahl, D. Von Cramon, and

M. Ullsperger, "Prediction of human errors by maladaptive changes in event-related brain

networks " in Proc.HBM, 2008.

[167] T. Eichele, R. Scheeringa, V. Calhoun, K. Hugdahl, and M. Bastiaansen, "Deconvolution of

Hemodynamic Responses from Alpha-band EEG," in Proc.HBM, 2008.

[168] T. Eichele, V. Calhoun, M. Moosmann, K. Specht, L. A. Jongsma, R. Quiroga, H. Nordby, and

K. Hugdahl, "Unmixing concurrent EEG-fMRI with parallel independent component analysis," in

Proc.HBM, 2008.

[169] T. Eichele, S. Rachakonda, and V. D. Calhoun, "EEGIFT: A Toolbox for Group Independent

Component Analysis of Event-Related EEG," in Proc. SPR, Austin, TX, 2008.

[170] Z. Feng, A. Caprihan, K. Blagoev, F. Zhao, and V. D. Calhoun, "Modeling of Phase Changes in

BOLD fMRI," in Proc.ISMRM, Toronto, Canada, 2008.

[171] K. E. Hild and V. D. Calhoun, "The Fourth Annual MLSP Competition," in International

Workshop on Machine Learning for Signal Processing (MLSP), Cancun, Mexico, 2008, pp. 38-

42.

[172] B. C. Ho, T. White, L. M. Rohrer, E. Epping, T. Wassink, V. Magnotta, H. J. Bockholt, K. O.

Lim, V. D. Calhoun, J. Roffmann, R. L. Gollub, S. C. Schulz, and N. C. Andreasen,

"Associations between DISC1 and White Matter Abnormalities in Schizophrenia: A Diffusion

Tensori Imaging Study," in Proc.ACNP, Scottsdale, AZ, 2008.

61


[173] K. Jagannathan, M. Assaf, V. D. Calhoun, and G. D. Pearlson, "Functional network connectivity

in semantic object recall task using independent component analysis," in Proc.ISMRM, Toronto,

Canada, 2008.

[174] K. Jagannathan, M. Assaf, V. D. Calhoun, and G. D. Pearlson, "Functional network connectivity

in semantic memory," in Proc.CNS, San Francisco, CA, 2008.

[175] O. Jeromine, V. D. Calhoun, and M. Pattichis, "Optimal Sampling Geometries for TV-Norm

Reconstruction of fMRI Data," in Asiolomar Conference on Signals, Systems, and Computers,

Pacific Grove, CA, 2008.

[176] C. Kim, D. Spring, J. Kroger, V. D. Calhoun, and V. P. Clark, "Exogenously Cued Attention

Switching Recruits Frontal Pole: an fMRI Study," in Proc. CNS, San Francisco, CA, 2008.

[177] J. Kroger, D. Spring, C. Kim, V. P. Clark, and V. D. Calhoun, "Double Dissociations between

Lateral and Medial Frontopolar Cortex for Maintenance and Manipulation of Integrated

Information: An fMRI Study," in Proc.CNS, San Francisco, CA, 2008.

[178] Y. Li, W. Wang, T. Adalı, and V. D. Calhoun, "CCA for Joint Blind Source Separation of

Multiple Datasets with Application to Group fMRI Analysis," in Proc. ICASSP, 2008.

[179] J. Liu, L. Xu, A. Caprihan, and V. Calhoun, "Extracting Principle Components for Discriminant

Analysis of fMRI Images," in Proc. ICASSP, 2008.

[180] J. Liu, J. N. Bixler, and V. D. Calhoun, "A multimodality ICA study-integrating genomic single

nucleotide polymorphisms with functional neuroimaging data," in Proc. Bioinformatics and

Biomedicine (BIBM), Philadelphia, PA, 2008, pp. 151-157.

[181] S. Meda, V. D. Calhoun, and G. D. Pearlson, "Diffusion Tensor Analysis in Schizophrenia and

First Degree Relatives," in Proc. SOBP, 2008.

[182] S. Meda, M. Stevens, B. S. Folley, V. D. Calhoun, and G. D. Pearlson, "Evidence for anamalous

network connectivity during working memory in schizophrenia: an ICA based analysis," in Proc.

SOBP, 2008.

[183] A. Michael, J. Fries, S. Baum, B. C. Ho, N. C. Andreasen, and V. D. Calhoun, "A Method to

Analyze Correlations between Multiple Brain Imaging Tasks to Characterize Schizophrenia," in

Proc. IEEE SSIAI, Santa Fe, NM, 2008.

[184] A. Michael, V. D. Calhoun, S. Baum, and N. C. Andreasen, "A Method to Classify Schizophrenia

using Inter-Task Spatial Correlations of Functional Brain Images," in Proc. EMBC, 2008.

[185] A. Michael, S. Baum, V. D. Calhoun, and A. Caprihan, "Correlations of Diffusion Tensor

Imaging Values and Symptom Scores in Patients with Schizophrenia," in Proc. EMBC, 2008.

[186] V. Potluru and V. D. Calhoun, "Group Learning using NMF Variants," in Proc.ISCAS, 2008.

[187] V. Potluru, S. M. Plis, and V. D. Calhoun, "Sparse shift-invariant NMF," in Proc. IEEE SSIAI,

Santa Fe, NM, 2008.

[188] C. C. Schultz, A. Georgopoulos, R. L. Gollub, N. C. Andreasen, B. C. Ho, J. Lauriello, and V. D.

Calhoun, "Linear Discriminate Analysis Applied to a Multicenter First Episode Schizophrenia

Sample," in Winter Workshop on Schizophrenia, 2008.

[189] M. Scully, B. Anderson, T. Lane, H. J. Bockholt, J. Burge, V. P. Clark, R. L. Gollub, J. Lauriello,

C. C. Schultz, V. D. Calhoun, and R. Jung, "A Dynamic Bayesian Network Analysis of

Functional Network Difference During the Oddball Task, Related To General Intelligence," in

Proc. Society for Neuroscience, San Diego, CA, 2008.

[190] R. F. Silva and V. D. Calhoun, "Identification of Brain Imaging Biomarkers by Optimized

Selection of Multimodal Independent Components," in Proc. IEEE SSIAI, Santa Fe, NM, 2008.

[191] R. Silva and V. D. Calhoun, "Identification of Brain Image Biomarkers by Optimized Selection

of Multimodal Datasets," in Proc.ISMRM, Toronto, 2008.

[192] P. Skudlarski, K. Jagannathan, V. D. Calhoun, B. Skulkarska, and G. D. Pearlson, "Measuring

Brain Connectivity using Diffusion Tensor Imaging and Resting State Temporal Correlations," in

Proc.HBM, 2008.

[193] P. Skudlarski, S. Meda, V. Calhoun, and G. Pearlson, "Effect of alcohol on the resting state

correlations," in Proc.HBM, 2008.

62


[194] J. Sui, J. Liu, L. Wu, A. Michael, L. Xu, T. Adalı, and V. D. Calhoun, "A Constrained Coefficient

ICA Algorithm For Group Difference Enhancement," in Proc. ICASSP, 2008.

[195] J. Sui and V. D. Calhoun, "A Method for Group Difference Enhancement by Constraining

Mixing Coefficients of ICA Framework," in Proc.ISMRM, Toronto, 2008.

[196] J. Sui and V. D. Calhoun, "Exploration of Optimal Group-Discriminating Features Using CC-

ICA," in Proc.Asilomar, Pacific Grove, CA, 2008.

[197] J. Turner, H. J. Bockholt, J. B. Segal, and V. D. Calhoun, "A comparison of volumetric methods

in a multi-site study of schizophrenia," in Proc. Society for Neuroscience, San Diego, CA, 2008.

[198] T. van Erp, M.-C. Chiang, D. Sun, M.-C. E. Hardt, J. H. Bockholt, J. A. Turner, V. D. Calhoun,

H. J. Johnson, D. N. Greve, S. Williams, D. O'Leary, J. Lauriello, C. G. Wible, K. O. Lim, B. A.

Mueller, G. G. Brown, J. Voyvodic, G. McCarthy, D. Mathalon, J. M. Ford, S. G. Potkin, T. D.

Cannon, P. M. Thompson, A. W. Toga, and F. ;, "3D Pattern of Brain Abnormalities in Chronic

Schizophrenia Visualized Using Tensor-Based Morphometry: a Multi-Site Structural Imaging

Study," in Proc.HBM, 2008.

[199] T. White, V. Magnotta, H. J. Bockholt, S. Williams, R. Pierson, H. Johnson, S. Wallace, R. L.

Gollub, V. D. Calhoun, and K. Lim, "Frontal and age-related white matter abnormalities in

schizophrenia: a multi-site diffusion tensor imaging study," in Winter Workshop on

Schizophrenia, 2008.

[200] L. Wu and V. D. Calhoun, "An Approach for Fusion between EEG and fMRI Data," in

Proc.ISMRM, Toronto, Canada, 2008.

[201] W. Xiong, Y.-O. Li, H. Li, T. Adalı, and V. D. Calhoun, "On ICA of Complex-Valued fMRI:

Advantages and Order Selection," in Proc. ICASSP, Las Vegas, NV, 2008.

[202] L. Xu, J. Liu, T. Adalı, and V. D. Calhoun, "Source Based Morphometry And Its Application To

Identify Relative Gray Matter And White Matter Differences In Schizophrenia Versus Controls,"

in Proc. ICASSP, 2008.

[203] L. Xu, G. D. Pearlson, and V. D. Calhoun, "Joint Source Based Morphometry to Identify Sources

of Gray Matter and White Matter Relative Differences in Schizophrenia Versus Healthy

Controls," in Proc.ISMRM, Toronto, Canada, 2008.

[204] H. J. Bockholt, M. Scully, W. Courtney, S. Rachakonda, A. Scott, A. Caprihan, J. Fries, R.

Kalyanam, J. Segall, R. de la Garza, S. Lane, and V. D. Calhoun, "Mining the Mind Research

Network: A Novel framework for exploring large scale, heterogeneous translational neuroscience

research data sources," in Proc. HBM, San Francisco, CA, 2009.

[205] V. D. Calhoun, H. Yang, G. D. Pearlson, and J. Liu, "Classification of Schizophrenia Using fMRI

and Genetic Data," in Proc. ACNP, Hollywood, CA, 2009.

[206] Z. Chen, V. D. Calhoun, and A. Caprihan, "Realistic modeling of intravoxel phase dispersion in

the presence of surrounding voxels," in Proc. HBM, San Francisco, CA, 2009.

[207] V. P. Clark, G. K. Beatty, R. E. Anderson, P. Kodituwakku, J. Phillips, K. A. Kiehl, and V. D.

Calhoun, "Cingulate and insula activity predicts relapse in recovering stimulant addicts," in Proc.

HBM, San Francisco, CA, 2009.

[208] V. P. Clark, B. Coffman, C. Garcia, M. P. Weisend, A. Vandermerwe, E. Browning, T. Lane, K.

Kelly, A. R. Mayer, A. Puffer, E. Rayborn, V. D. Calhoun, M. Bikson, E. Wassermann, and J.

Phillips, "Transcranial Direct Current Stimulation (TDCS) Targeted Using Brain Imaging Greatly

Accelerates Visual Learning," in Proc.SFN, 2009.

[209] B. Coffman, V. P. Clark, C. Garcia, M. P. Weisend, R. Barrow, A. Vandermerwe, A. R. Mayer,

E. Browning, D. Puffer, V. D. Calhoun, E. Wassermann, J. P. Phillips, T. Lane, K. Kelly, M.

Bickson, and E. M. Rayborn, "Changes in Brain Networks with Learning of Covert Threat Cues,"

in Proc.SFN, 2009.

[210] N. Correa, Y. Li, T. Adalı, and V. D. Calhoun, "Fusion of fMRI, sMRI, and EEG Data Using

Canonical Correlation Analysis," in Proc.IEEE Int.Conf.Acoustics, Speech, Signal Processing

(ICASSP), Taiwan, 2009.

63


[211] N. Correa, Y. Li, T. Adalı, and V. D. Calhoun, "Investigating associations across fMRI, sMRI,

and EEG data for the auditory oddball task using canonical correlation analysis," in Proc. HBM,

San Francisco, CA, 2009.

[212] N. Driesen, G. McCarthy, Z. Bhagwager, V. D. Calhoun, D. C. D'Souza, J. Holub, P. T. Morgan,

and J. K. Krystal, "NMDA Receptor Antagonist Ketamine Produces Opposing Effects on Resting

and Task-Related Brain Activation During Working Memory in Humans," in Proc. HBM, San

Francisco, CA, 2009.

[213] S. Ehrlich, E. E. Morrow, S. Wallace, M. Naylor, H. J. Bockholt, D. Holt, A. Lundquist, A.

Yendiki, J. Roffmann, T. White, V. P. Clark, V. D. Calhoun, and R. L. Gollub, "The COMT

Val158Met Polymorphism and Temporal Lobe Volumetry in Patients with Schizophrenia and

Healthy Adults," in Proc. HBM, San Francisco, CA, 2009.

[214] T. Eichele, S. Rachakonda, and V. D. Calhoun, "EEGIFT: A toolbox for group temporal ICA

event-related EEG," in Proc. HBM, San Francisco, CA, 2009.

[215] Z. Feng, Z. Chen, A. Caprihan, K. Blagoev, and V. D. Calhoun, "Predicting Phase Changes

Patterns in BOLD fMRI," in Proc. HBM, San Francisco, CA, 2009.

[216] J. M. Ford, B. J. Roach, K. W. Jorgensen, J. A. Turner, G. G. Brown, R. Notestine, A. Bischoff-

Grethe, D. N. Greve, C. G. Wible, J. Lauriello, A. Belger, B. Mueller, V. D. Calhoun, A. Preda,

D. Keator, D. O'Leary, K. O. Lim, G. Glover, S. Potkin, F. BIRN, and D. Mathalon, "Functional

pathology progresses with age in schizophrenia," in Proc. HBM, San Francisco, CA, 2009.

[217] A. R. Franco, M. Mannell, J. Ling, B. Bedrick, V. D. Calhoun, and A. R. Mayer, "Connectivity

Between Consistent Resting State Networks and Fractional Anisotropy Revealed by Joint

Independent Component Analysis," in Proc. HBM, San Francisco, CA, 2009.

[218] M. Havlicek, J. Jan, and V. Calhoun, "Evaluation of Functional Network Connectivity in Event-

related FMRI Data Based on ICA and Time-frequency Granger Causality," in Proc. World

Congress on Medical Physics and Biomedical Engineering, 2009.

[219] M. Havlicek, J. Jan, and V. Calhoun, "Extended Time-frequency Granger Causality for

Evaluation of Functional Network Connectivity in Event-related FMRI Data," in Proc. EMBS,

2009.

[220] M. Havlicek, J. Jan, M. Brazdil, and V. D. Calhoun, "Nonlinear estimation of BOLD signal based

on cubature particle filter," in Proc. Biosignal, Brno, Czech Republic, 2009.

[221] K. Jagannathan, V. D. Calhoun, J. Liu, S. Meda, and G. D. Pearlson, "Combining sMRI and SNP

data to investigate genetic influences on brain structure using parallel ICA in healthy controls &

schizophrenia," in Proc. HBM, San Francisco, CA, 2009.

[222] M. Juarez, T. White, G. D. Pearlson, J. R. Bustillo, J. Lauriello, B. C. Ho, H. J. Bockholt, V. P.

Clark, R. Gollub, V. Magnotta, G. Machado, and V. D. Calhoun, "Functional connectivity

differences in first episode and chronic schizophrenia patients during an auditory sensorimotor

task revealed by independent component analysis of a large multisite study," in Proc. HBM, San


[223] E. Karageorgiou, R. L. Gollub, N. C. Andreasen, B. C. Ho, J. Lauriello, V. D. Calhoun, S. C.

Schulz, and A. Georgopoulos, "Neuropsychological Testing and Structural Magnetic Resonance

Imaging in the Diagnosis of Schizophrenia after a First Psychotic Episode," in Proc.ICOSR,

2009.

[224] Y. Li, T. Adalı, and V. D. Calhoun, "A group study of simulated driving fMRI data by multi-set

canonical correlation analysis," in Proc. HBM, San Francisco, CA, 2009.

[225] J. Liu, K. E. Hutchison, and V. D. Calhoun, "A simple yet effective analysis on genome-wide

association using fMRI brain activation on alcohol abuse," in Proc. HBM, San Francisco, CA,

2009.

[226] S. Meda, J. Gelernter, J. Liu, M. Stevens, V. D. Calhoun, and G. D. Pearlson, "A Multivariate

Parallel ICA Approach to Investigate Relationships Between Functional Neural Networks and

Genetic Profiles in Schizophrenia " in Proc. ACNP, Hollywood, CA, 2009.

64


[227] A. Michael, S. Baum, V. P. Clark, R. Jung, K. O. Lim, T. White, B. C. Ho, R. L. Gollub, and V.

D. Calhoun, "Fusion of Structural-Functional Brain Images Reveals Differences in Schizophrenia

in a Multi Site Study," in Proc. ISMRM, Honolulu, Hawaii, 2009.

[228] A. Michael, S. Baum, T. J. White, N. C. Andreasen, J. M. Segall, R. E. Jung, V. P. Clark, R. L.

Gollub, S. C. Schulz, J. L. Roffman, B. C. Ho, K. O. Lim, H. J. Bockholt, and V. D. Calhoun,

"Inter-voxel Cross-Correlation Reveals Aberrantly Low Structural and Functional Linkage in

Schizophrenia in a Multi-Site Study," in Proc. HBM, San Francisco, CA, 2009.

[229] A. Michael, V. D. Calhoun, G. D. Pearlson, S. Baum, and A. Caprihan, "An Analysis of using

Diffusion Tensor Imaging Measures and Symptom Scores to Classify Patients with

Schizophrenia," in Proc. HBM, San Francisco, CA, 2009.

[230] A. Michael, V. D. Calhoun, G. Pearlson, S. Baum, and A. Caprihan, "Application of Canonical

Correlation Analysis to Identify Regions of Significant Correlation between Symptom Scores and

DTI Measures in Schizophrenia," in Proc. ISMRM, Honolulu, Hawaii, 2009.

[231] A. Michael, S. Baum, and V. D. Calhoun, "A Technique to Detect Outliers Automatically in

Multi-Site fMRI Data," in Proc. ISMRM, Honolulu, Hawaii, 2009.

[232] S. M. Plis, V. Potluru, V. D. Calhoun, and T. Lane, "Correlated Noise: How it Breaks NMF, and

What to Do About It," in Proc. MLSP, Grenoble, France, 2009.

[233] S. M. Plis, T. Lane, M. P. Weisend, and V. D. Calhoun, "MEG and fMRI for nonlinear estimation

of neural activity," in Proc. Asilomar, Pacific Grove, CA, 2009.

[234] V. Potluru, S. M. Plis, M. Morup, V. D. Calhoun, and T. Lane, "Efficient Multiplicative updates

for Support Vector Machines," in Proc. SDM, Sparks, NV, 2009.

[235] P. Rodriguez, N. M. Correa, T. Adalı, and V. D. Calhoun, "Quality map thresholding for de-

Noising of complex-valued fMRI data and its application to ICA of fMRI," in Proc. MLSP,

Grenoble, France, 2009.

[236] U. Sakoglu and V. D. Calhoun, "Dynamic windowing reveals task-modulation of functional

network connectivity in schizophrenia patients vs healthy controls," in Proc. ISMRM, Honolulu,

Hawaii, 2009.

[237] U. Sakoglu and V. D. Calhoun, "Functional network connectivity with temporal derivatives of

sICA time-courses in schizophrenia patients vs healthy controls," in Proc. ISMRM, Honolulu,

Hawaii, 2009.

[238] U. Sakoglu, A. Michael, and V. D. Calhoun, "Classification of schizophrenia patients vs healthy

controls based on dynamic functional network connectivity," in Proc. HBM, San Francisco, CA,

2009.

[239] U. Sakoglu and V. D. Calhoun, "Temporal Dynamics of Functional Network Connectivity at

Rest: A Comparison of Schizophrenia Patients and Healthy Controls " in Proc. HBM, San


[240] R. Silva and V. D. Calhoun, "Divergence Measurements for the Optimal Identification of

Multimodal Biomarkers," in Proc. HBM, San Francisco, CA, 2009.

[241] J. Sui and V. D. Calhoun, "An Automatic Artifact Removal Method for Independent Components

Derived from Second-level FMRI Analysis," in Proc. HBM, San Francisco, CA, 2009.

[242] J. Sui and V. D. Calhoun, "Identification of Optimal FMRI Components Using Combined Group-

Discriminative Techniques," in Proc. HBM, San Francisco, CA, 2009.

[243] J. Sui, Y. Li, T. Adalı, and V. D. Calhoun, "A New Joint Blind Source Separation Model for Two

Datasets and Its Application to Second-level FMRI Group Analysis," in Proc. HBM, San


[244] J. Turner, J. Segall, G. Guffanti, V. D. Calhoun, H. J. Bockholt, and S. Potkin, "Structural

Imaging Reveals Novel Genetic Influences in Schizophrenia," in Proc. WCPG, San Diego, CA,

2009.

[245] T. White, L. Leybya, B. C. Ho, V. P. Clark, V. D. Calhoun, S. Wallace, H. J. Bockholt, R.

Gollub, N. C. Andreasen, S. C. Schulz, V. Magnotta, and K. O. Lim, "Cigarette Smoking

65


Disrupts White Matter Integrity in Patients with Schizophrenia," in Proc. HBM, San Francisco,

CA, 2009.

[246] T. White, V. Magnotta, H. J. Bockholt, S. Williams, R. Gollub, B. Mueller, B. C. Ho, R. Jung, V.

P. Clark, J. Lauriello, J. R. Bustillo, S. C. schulz, N. C. Andreasen, V. D. calhoun, and K. O. Lim,

"Evidence for Progressive White Matter Abnormalities in Schizophrenia: A Multi-site diffusion

tensor imaging study," in ICOSR, 2009.

[247] L. Wu, V. D. Calhoun, and T. Eichele, "Functional connectivity in eyes open vs. eyes closed

resting state fMRI," in Proc. HBM, San Francisco, CA, 2009.

[248] L. Xu and V. D. Calhoun, "sMRI Complex Framework For Evaluating Relative Gray And White

Matter Group Differences," in Proc. ISMRM, Honolulu, Hawaii, 2009.

[249] L. Xu and V. D. Calhoun, "Source Based Morphometry: Approaches to Identify Gray and White

Matter Group Differences with Application to Schizophrenia," in Proc. HBM, San Francisco, CA,

2009.

[250] E. Allen, E. Erhardt, T. Eichele, A. R. Mayer, and V. D. Calhoun, "Comparison of pre-

normalization methods on the accuracy of group ICA results," in Proc. HBM, Barcelona, Spain,

2010.

[251] E. A. Allen, E. B. Erhardt, E. Damaraju, W. Gruner, J. M. Segall, R. F. Silva, M. Havlicek, S.

Rachakonda, J. Fries, R. Kalyanam, A. M. Michael, A. Caprihan, J. A. Turner, T. Eichele, S.

Adelsheim, A. Bryan, J. Bustillo, V. P. Clark, S. Feldstein-Ewing, F. M. Filbey, C. Ford, K.

Hutchison, R. E. Jung, K. A. Kiehl, P. Kodituwakku, Y. Komesu, A. R. Mayer, G. D. Pearlson, P.

J., J. Sadek, M. Stevens, U. Teuscher, R. J. Thoma, and V. D. Calhoun, "A baseline for the

multivariate comparison of resting state networks," in Biennial Conference on Resting State /

Brain Connectivity Milwaukee, WI, 2010.

[252] M. Arbabshirani and V. D. Calhoun, "ICA-SVM approach for discrimination between healthy

subjects and schizophrenia patients based on resting state functional network connectivity," in

Biennial Conference on Resting State / Brain Connectivity Milwaukee, WI, 2010.

[253] S. B. Brahmbhatt, K. W. Jorgensen, K. A. Kiehl, V. D. Calhoun, T. McGlashan, G. D. Pearlson,

S. W. Woods, and D. H. Mathalon, "Accelerated Age-Related Decline in Oddball Task-Related

Brain Activity From Adolescence to Adulthood in the Psychosis Prodrome," in Proc. SOBP, New

Orleans, LA, 2010.

[254] J. Chen, J. Liu, and V. D. Calhoun, "A Pipeline for Copy Number Variation Detection based on

Principal Component Analysis," in Proc. IEEE Bioinformatics and Biomedicine, Hong Kong,

China, 2010.

[255] J. Chen, J. Liu, and V. D. Calhoun, "Correction of copy number variation data using principal

component analysis," in Proc. Bioinformatics and Biomedicine (BIBM), Hong Kong, 2010.

[256] V. P. Clark, B. Coffman, C. Garcia, M. P. Weisend, T. Lane, A. R. Mayer, E. Raybourn, V. D.

Calhoun, and E. Wassermann, "Transcranial Direct Current Stimulation (TDCS) Targeted Using

Brain Imaging Accelerates Learning," in Proc. HBM, Barcelona, Spain, 2010.

[257] B. Coffman, V. P. Clark, C. Garcia, M. P. Weisend, R. Barrow, A. Vandermerwe, E. Browning,

D. Puffer, E. Rayborn, V. D. Calhoun, E. Wassermann, J. P. Phillips, and R. Jung, "TDCS

accelerated learning of covert threat detection is influenced by current strength and stimuli

familiarity," in Proc.Biomag, 2010.

[258] N. Correa, T. Eichele, T. Adalı, Y. Li, and V. D. Calhoun, "Fusion of Concurrent single Trial

EEG Data and FMRI Data Using Multi-set Canonical Correlation Analysis," in Proc. ICASSP,

Dallas, TX, 2010.

[259] P. Das, J. Lagopoulos, V. D. Calhoun, A. Henderson, C. M. Coulston, and G. S. Malhi,

"Schizophrenia and Theory of Mind deficit: A functional network connectivity approach," in

Proc. HBM, Barcelona, Spain, 2010.

[260] E. Erhardt, S. Rachakonda, E. Bedrick, T. Adalı, and V. D. Calhoun, "Comparison of multi-

subject ICA methods for analysis of fMRI data," in Proc. HBM, Barcelona, Spain, 2010.

66


[261] M. Ewers, A. Bokde, J. Park, S. Rachakonda, S. Teipel, V. D. Calhoun, and H. Hampel,

"Functional connectivity changes during visual processing associated with grey matter atrophy in

Alzheimer’s disease," in Proc. ICAD, Honoloulu, HI, 2010.

[262] M. Havlicek, J. Jan, and V. Calhoun, "Dynamic Granger causality with embedded hemodynamic

model," in Proc. HBM, Barcelona, Spain, 2010.

[263] K. E. Hild, M. Kurimo, and V. D. Calhoun, "The Sixth Annual MLSP Competition," in

International Workshop on Machine Learning for Signal Processing (MLSP), Kittila, Finland,

2010, pp. 107-111.

[264] H. Li, T. Adalı, N. Correa, P. Rodriguez, and V. D. Calhoun, "Flexible Complex ICA of fMRI

Data," in Proc. ICASSP, Dallas, TX, 2010.

[265] J. Liu and V. D. Calhoun, "An algorithm for informed genome wide association studies—

Integrating targeted gene studies and data-driven factorization by reference ICA," in Workshop

on Genomic Signal Processing and Statistics (GENSIPS), Cold Spring Harbor, NY, 2010.

[266] S. Ma, X. Li, N. Correa, T. Adalı, and V. D. Calhoun, "Independent Subspace Analysis with Prior

Information for fMRI Data," in Proc. ICASSP, Dallas, TX, 2010.

[267] D. Mathalon, K. W. Jorgensen, B. J. Roach, V. D. Calhoun, M. Diaz, G. Brown, R. Notestine, A.

Bischoff-Grethe, D. Greve, G. McCarthey, A. Belger, J. A. Turner, S. G. Potkin, C. G. Wible, B.

A. Mueller, J. Lauriello, G. H. Glover, K. O. Lim, D. O'Leary, A. Preda, D. Keator, T. Van Erp,

FBIRN, and J. M. Ford, "Failure of Normal Aging-Related Hemispheric Asymmetry Reduction

in Brain Activity During Target Detection in Schizophrenia," in Proc. SOBP, New Orleans, LA,

2010.

[268] S. M. Plis, V. D. Calhoun, M. P. Weisend, T. Eichele, E. Besada-Portas, and T. Lane, "MEG and

fMRI for nonlinear estimation of neural activity," in Proc. NIPS Workshop on Connectivity

Inference and NeuroImaging, Whistler, CO, 2010.

[269] S. M. Plis, V. D. Calhoun, M. P. Weisend, and T. Lane, "Permutations as angular data: efficient

inference in factorial spaces," in IEEE-ICDM, Sydney, Australia, 2010.

[270] P. Rodriguez, T. Adalı, H. Li, N. Correa, and V. D. Calhoun, "Phase Correction and Denoising

for ICA of Complex fMRI Data," in Proc. ICASSP, Dallas, TX, 2010.

[271] R. Silva and V. D. Calhoun, "Evaluating Joint Histograms in a Joint ICA Fusion Framework:

Methods for Feature Extraction and Component Selection," in Human Brain Mapping, Barcelona,

Spain, 2010.

[272] T. White, H. J. Bockholt, A. Caprihan, S. Ehrlich, D. S. Manoach, B. Mueller, B. C. Ho, V. P.

Clark, J. Lauriello, J. R. Bustillo, N. C. Andreasen, R. Gollub, V. D. Calhoun, K. O. Lim, S. C.

Schulz, and V. Magnotta, "A combined voxel-based and pothole approach to evaluate the spatial

characteristics of white matter deficits in schizophrenia," in Proc. HBM, Barcelona, Spain, 2010.

[273] S. T. Witt, V. D. Calhoun, G. D. Pearlson, and M. C. Stevens, "The effects of task context and

brain injury on default mode network brain functional connectivity," in Proc. ISMRM,

Stockholm, Sweden, 2010, p. 3505.

[274] S. T. Witt, Lovejoy, V. D. Calhoun, G. D. Pearlson, and M. Stevens, "Changes in frequency

power spectrum observed as result of mild traumatic brain injury," in Proc. HBM, Barcelona,

Spain, 2010, p. 439.

[275] L. Wu, T. Eichele, and V. D. Calhoun, "Alpha Hemodynamic Responses in Eyes Open vs. Eyes

Closed Resting State EEG-fMRI," in Proc. HBM, Barcelona, Spain, 2010.

[276] L. Xu, J. Segall, R. Jung, and V. D. Calhoun, "Constrained Source Based Morphometry Identifies

Structural Network Underlying the Default Mode Network," in Proc. HBM, Barcelona, Spain,

2010.

[277] C. Abbott, A. Caprihan, J. Yamamoto, N. I. Perrone-Bizzozero, G. Pearlson, and V. D. Calhoun,

"Source Based Morphometry Analysis of Group Differences in Fractional Anisotropy in

Schizophrenia," in Proc. HBM, Quebec City, Canada, 2011.

67


[278] E. Aharoni, D. Kosson, V. D. Calhoun, and K. A. Kiehl, "Neural Mechanisms of Passive

Avoidance Learning in Psychopathy," in Society for the Scientific Study of Psychopath Montreal,

Canada, 2011.

[279] E. A. Allen, E. Erhardt, Y. Wei, T. Eichele, and V. D. Calhoun, "Capturing inter-subject

variability with group independent component analysis of fMRI data: a simulation study," in

Proc. HBM, Quebec City, Canada, 2011.

[280] M. Anderson, N. Correa, V. D. Calhoun, and T. Adalı, "Joint Blind Source Separation for Multi-

modality Data Fusion through Subject Co-variations," in Proc. Learning Workshop, Fort

Lauderdale, FL, 2011.

[281] M. Arbabshirani and V. D. Calhoun, "Functional Network Connectivity during Rest and Task:

Comparison of Healthy Controls and Schizophrenic Patients," in Proc. EMBS, Boston, MA,

2011.

[282] V. Calhoun, A. Mayer, J. Stephen, F. M. Hanlon, J. M. Houck, R. Jung, and N. Bizzozero, "A

network approach to multimodal imaging and genetics in schizophrenia: Strategies, challenges,

and findings," in 13th International Congress on Schizophrenia Research, Colorado Spring, CO,

2011.

[283] E. Castro, M. Martinez-Ramon, A. Caprihan, K. A. Kiehl, and V. D. Calhoun, "Complex fMRI

data classification using composite kernels: application to schizophrenia," in Proc. HBM, Quebec

City, Canada, 2011.

[284] Z. Chen, Z. Chen, and V. D. Calhoun, "Voxel magnetic field disturbance from remote vasculature

in BOLD fMRI," in Proc. SPIE, Orlando, FL, 2011.

[285] Z. Chen, Z. Chen, and V. D. Calhoun, "Multiresolution voxel decomposition complex-valued

BOLD signals reveals phasor turbulence," in Proc. SPIE, Orlando, FL, 2011.

[286] Z. Chen, Q. He, and V. D. Calhoun, "The impact of respiratory and cardiac effects on the phase

and magnitude of resting-state fMRI data," in Proc. SPIE, Orlando, FL, 2011.

[287] Z. Chen, A. Caprihan, and V. D. Calhoun, "BOLD susceptibility map reconstruction from fMRI

by 3D total variation regularization," in Proc. ISMRM, Montreal, Canada, 2011.

[288] J. Chen, J. Liu, and V. D. Calhoun, "Genomic risk for schizophrenic brain function analyzed by

Parallel-ICA," in Proc. HBM, Quebec City, Canada, 2011.

[289] J. Chen, J. Liu, D. Boutte, and V. D. Calhoun, "A Pipeline for Copy Number Variation Detection

based on Principal Component Analysis," in Proc. EMBS, Boston, MA, 2011.

[290] J. T. Dea, M. Anderson, E. Allen, V. D. Calhoun, and T. Adalı, "IVA for multi-subject fMRI

analysis: A comparative study using a new simulation toolbox," in Proc. IEEE Workshop on

Machine Learning for Signal Processing (MLSP), Beijing, China, 2011.

[291] W. Du, H. Li, X.-L. Li, V. D. Calhoun, and T. Adalı, "ICA of fMRI data: Performance of Three

ICA Algorithms and the Importance of Taking Correlation Information into Account," in IEEE

Symp. on Biomedical Imaging, Chicago, IL, 2011.

[292] E. Erhardt, E. A. Allen, Y. Wei, T. Eichele, and V. D. Calhoun, "A simulation toolbox for fMRI

data: simtb," in Proc. HBM, Quebec City, Canada, 2011.

[293] M. Havlicek, J. Jan, M. Brazdil, and V. D. Calhoun, "Deconvolution of neuronal signal from

hemodynamic response," in Proc. ICASSP, Prague, Czech Republic, 2011.

[294] M. Havlicek, J. Jan, M. Brazdil, and V. D. Calhoun, "Estimation of neuronal responses from

fMRI data," in Proc. EMBS, Boston, MA, 2011.

[295] S. Khullar, A. M. Michael, N. Correa, T. Adalı, S. Baum, and V. D. Calhoun, "Improved 3-D

Wavelet-based De-noising of fMRI data," in Proc. SPIE, Orlando, FL, 2011.

[296] S. Khullar, A. M. Michael, N. Correa, T. Adalı, S. Baum, and V. D. Calhoun, "A new metric to

measure shape differences in fMRI activity," in Proc. SPIE, Orlando, FL, 2011.

[297] S. Khullar, A. Michael, N. Correa, T. Adalı, S. Baum, and V. D. Calhoun, "Wavelet-based

denoising and independent component analysis for improving multi-group inference in fMRI

data," in IEEE Symp. on Biomedical Imaging, Chicago, IL, 2011.

68


[298] S. Khullar, A. Michael, N. Cahill, S. A. Baum, and V. D. Calhoun, "Functional Normalization

through ICA (ICA-fNORM) with Intrinsic Networks as Functional Templates," in Proc. HBM,

Quebec City, Canada, 2011.

[299] M. A. King, W. Courtney, R. De la Garza, S. Lane, A. Scott, D. Wood, and V. D. Calhoun, "An

innovative neuroinformatics tool suite built for large heterogeneous datasets," in Proc. HBM,


[300] X.-L. Li, V. D. Calhoun, and T. Adalı, "Order detection for fMRI analysis: Joint estimation of

Downsampling depth and order by information theoretic criteria," in IEEE Symp. on Biomedical

Imaging, 2011.

[301] Q. Lin, J. Wang, X. Gong, J. Wu, J. Chen, and V. Calhoun, "Semi-blind Kurtosis Maximization

Algorithm Applied to Complex Valued fMRI Data," in Proc. MLSP, Beijing, China, 2011.

[302] D. Lin, H. Cao, V. D. Calhoun, and Y.-P. Wang, "Classification of schizophrenia patients with

combined analysis of SNP and fMRI data based on sparse representation," in Proc.

Bioinformatics and Biomedicine (BIBM), Philadelphia, PA, 2011.

[303] S. Ma, T. Eichele, N. Correa, V. D. Calhoun, and T. Adalı, "Hierarchical and graphical analysis

of fMRI network connectivity in healthy and schizophrenic groups," in IEEE Symp. on

Biomedical Imaging, Chicago, IL, 2011.

[304] A. Michael, M. A. King, and V. D. Calhoun, "Gray Matter Concentration and Functional

Activation for a Working Memory Task Shows Inverse Correlation in Schizophrenia," in Proc.

ICOSR, Colorado Springs, CO, 2011.

[305] S. M. Plis, R. Jung, L. Petree, C. L. Wootton, L. M. Bullard, A. Van der Merwe, K. Paulson, A.

Vakhtin, A. Jaramillo, V. D. Calhoun, and M. P. Weisend, "Effective connectivity estimation

from somatosensory MEG data: a study of the tDCS effect," in Proc. HBM, Quebec City,

Canada, 2011.

[306] S. M. Plis, S. McCracken, T. Lane, and V. D. Calhoun, "Directional statistics on permutations,"

in Proc. Learning Network, Fort Lauterdale, FL, 2011.

[307] S. M. Plis, S. McCracken, T. Lane, and V. D. Calhoun, "Directional statistics on permutations,"

in Proc. Artificial Intelligence and Statistics (AISTATS), Fort Lauterdale, FL, 2011.

[308] V. Potluru, S. M. Plis, S. Luan, V. D. Calhoun, and T. Hayes, "Sparseness and a Reduction from

Totally Nonnegative Least Squares to SVM," in Proc. IJCNN, San Jose, CA, 2011.

[309] J. Segall and V. D. Calhoun, "Structural and Functional Networks in the Human Brain," in Proc.

HBM, Quebec City, Canada, 2011.

[310] R. Silva and V. D. Calhoun, "Validating Divergence as a Tool for Assessment of Group

Differences in a JICA Fusion Framework," in Proc. HBM, Quebec City, Canada, 2011.

[311] J. Sui and V. D. Calhoun, "Discriminating Schizophrenia and Bipolar Disorder by Unique

Patterns of Brain Function and Structure," in Proc. ISMRM, Montreal, Canada, 2011.

[312] J. Turner, M. A. King, A. Belger, V. D. Calhoun, S. Ehrlich, J. G. Csernansky, S. G. Potkin, R. L.

Gollub, D. H. Mathalon, J. M. Segall, R. Kikinis, J. M. Ford, F. Macciardi, M. Morgan, K. O.

Lim, D. S. O'Leary, A. W. Toga, T. Van Erp, L. Wang, and C. G. Wible, "Heritability and

genetics of source based morphometry in schizophrenia," in Proc. ICOSR, Colorado Springs, CO,

2011.

[313] A. M. Ward, A. P. Schultz, D. G. McLauren, C. A. Sullivan, J. A. Becker, K. A. Johnson, V. D.

Calhoun, and R. A. Sperling, "Amyloid deposition demonstrates differential effect in normal

elderly and MCI subjects across task and rest in the default mode network," in Proc. HBM,


[314] A. M. Ward, A. P. Schultz, D. G. McLauren, C. A. Sullivan, J. A. Becker, K. A. Johnson, V. D.

Calhoun, and R. A. Sperling, "Amyloid burden displays a differential effect in the default mode

network (DMN) across clinically normal (CN) and mild cognitive impairment (MCI) subjects," in

Proc. SFN, Washington, D. C., 2011.

69


[315] L. Wu, T. Eichele, and V. D. Calhoun, "Parallel Independent Component Analysis using an

Optimized Neurovascular Coupling for Concurrent EEG-fMRI Sources," in Proc. EMBS, Boston,

MA, 2011.

[316] R. A. Yeo, S. W. Gangestad, J. Liu, T. Wassink, and V. D. Calhoun, "Rare copy number

deletions and intelligence in schizophrenic patients and healthy controls," in Proc. Behavior

Genetics Association, Newport, RI, 2011.

[317] C. Abbott, N. Lemke, S. Gopal, R. J. Thoma, J. Bustillo, V. D. Calhoun, and J. Turner,

"Electroconvulsive therapy response in major depressive disorder: a pilot functional network

connectivity resting state fMRI investigation," in American College of

Neuropsychopharmacology, Hollywood, CA, 2012.

[318] E. Allen, E. Erhardt, and V. D. Calhoun, "Data visualization in the neurosciences: overcoming the

curse of dimensionality," in Proc. HBM, Beijing, China, 2012.

[319] E. Allen, E. Damaraju, S. M. Plis, E. Erhardt, T. Eichele, and V. D. Calhoun, "Tracking whole-

brain connectivity dynamics in the resting-state," in Proc. HBM, Beijing, China, 2012.

[320] E. Allen and V. D. Calhoun, "Extracting intrinsic functional networks with feature-based group

independent component analysis," in Proc. HBM, Beijing, China, 2012.

[321] M. Arbabshirani, M. Pattichis, and V. D. Calhoun, "Functional Volumetric Brain Abnormalities

in Schizophrenia Patients," in ICIP, Orlando, FL, 2012.

[322] V. D. Calhoun, J. Sui, E. Allen, K. A. Kiehl, and G. G. Pearlson, "Aberrant Intrinsic Networks in

Schizophrenia and Bipolar Disorder in An Auditory Oddball Task," in Proc. HBM, Beijing,

China, 2012.

[323] J. Chen, V. D. Calhoun, and J. Liu, "Parallel Independent Component Analysis with Reference,"

in Proc. HBM, Beijing, China, 2012.

[324] Z. Chen, J. Liu, and V. D. Calhoun, "Susceptibility-based functional neuroimaging: A simulation

study," in Proc. HBM, Beijing, China, 2012.

[325] Z. Chen, J. Liu, A. Caprihan, and V. D. Calhoun, "Bidirectional BOLD activation depiction by

jointly using the MR magnitude and phase response maps," in Proc. HBM, Beijing, China, 2012.

[326] Z. Chen, A. Caprihan, and V. D. Calhoun, "MR magnitude image shrinkage due to BOLD fMRI

nonlinearity," in Proc. HBM, Beijing, China, 2012.

[327] J. Chen, V. D. Calhoun, and J. Liu, "ICA Order Selection Based on Consistency: Application to

Genotype Data," in Proc. EMBS, San Diego, CA, 2012.

[328] E. Damaraju, J. Phillips, J. Lowe, E. Allen, V. D. Calhoun, and A. Caprihan, "Functional

Connectivity Changes in a Developing Brain of Healthy Infants," in Proc. HBM, Beijing, China,

2012.

[329] E. Damaraju, J. Turner, A. Preda, T. Van Erp, D. Mathalon, J. M. Ford, S. Potkin, and V. D.

Calhoun, "Static and dynamic functional network connectivity during resting state in

schizophrenia," in American College of Neuropsychopharmacology, Hollywood, CA, 2012, p.

217.

[330] M. Havlicek, K. Uludag, K. J. Friston, V. D. Calhoun, and A. Roebroeck, "Validation of

stochastic DCM for network discovery: A simulation study," in Proc. HBM, Beijing, China,

2012.

[331] M. King, W. Courtney, S. Lane, A. Scott, J. Turner, R. Wang, D. Wood, and V. D. Calhoun,

"COINS (Collaborative Informatics Neuroimaging Suite): Give, Get, Collect," in Proc.

NeuroInformatics, Munich, Germany, 2012.

[332] S. M. Plis, J. Sui, T. Lane, S. Roy, V. P. Clark, V. Potluru, A. Michael, M. P. Weisend, and V. D.

Calhoun, "Capturing high-order interactions in neuroimaging data," in Proc. HBM, Beijing,

China, 2012.

[333] P. Rodriguez, V. D. Calhoun, and T. Adalı, "Complex-valued analysis and visualization of fMRI

data for event-related and block-design paradigms," in Proc. MLSP, Santander, Spain, 2012.

70


[334] C. Rodriguez, S. Davies, V. D. Calhoun, D. D. Savage, and D. A. Hamilton, "The effects of

moderate prenatal ethanol exposure on resting state networks and functional connectivity of the

anesthetized rat brain," in Research Society of Alcoholism, San Francisco, CA, 2012.

[335] R. Silva and V. D. Calhoun, "An Assessment of the Limitations of Joint ICA in Multimodal Data

Fusion," in Proc. HBM, Beijing, China, 2012.

[336] J. Sui, H. He, Q. Yu, T. Adalı, G. D. Pearlson, and V. D. Calhoun, "A Novel N-Way Brain

Imaging Data Fusion Model And Its Application to Schizophrenia," in Proc. HBM, Beijing,

China, 2012.

[337] J. Sui, G. D. Pearlson, A. Caprihan, T. Adalı, K. A. Kiehl, and V. D. Calhoun, "Discriminating

Schizophrenia and Bipolar Disorder by Fusion of FMRI and DTI Data," in Proc. HBM, Beijing,

China, 2012.

[338] J. Sui, H. He, J. Liu, Q. Yu, T. Adalı, G. Pearlson, and V. D. Calhoun, "Three-Way FMRI-DTI-

Methylation Data Fusion Based on mCCA+jICA and Its Application to Schizophrenia," in Proc.

EMBS, San Diego, CA, 2012.

[339] J. Turner, H. Chen, V. D. Calhoun, C. Abbott, C. Gasparovic, and J. Bustillo, "Glutamatergic

Metabolism and Resting State Connectivity in Schizophrenia," in SIRS, 2012.

[340] J. Vogelstein, S. Sikka, B. Cheung, R. Khanuja, Q. Li, Y. Chao-Gan, C. Priebe, V. D. Calhoun,

and R. Burns, "BRAINSTORM Towards Clinically and Scientifically Useful NeuroImaging

Analytics," in Proc. NeuroInformatics, Munich, Germany, 2012.

[341] Q. Yu, J. Sui, E. Allen, K. A. Kiehl, G. D. Pearlson, and V. D. Calhoun, "Disrupted Correlation

between Low Frequency Power and Connectivity Strength in Schizophrenic Brain," in Proc.

HBM, Beijing, China, 2012.

[342] E. Allen, T. Eichele, L. Wu, and V. D. Calhoun, "EEG Signature of Functional Connectivity

States," in Proc HBM, Seattle, WA, 2013.

[343] M. Arbabshirani, E. Damaraju, S. M. Plis, T. Adalı, and V. D. Calhoun, "An assessment of the

impact of autocorrelation on functional network connectivity," in Proc. HBM, Seattle, WA, 2013.

[344] J. H. Balsters, I. Robertson, and V. D. Calhoun, "BOLD frequency power indexes working

memory performance," in Proc. HBM, Seattle, WA, 2013.


Adalı, "Independent component analysis for brain fMRI does indeed select for maximal

independence," in Proc. HBM, Seattle, WA, 2013.

[346] V. D. Calhoun, M. Yaesoubi, B. Rashid, and R. Miller, "Characterization of Connectivity

Dynamics in Intrinsic Brain Networks," in GlobalSIP, Austin, TX, 2013.

[347] H. Cao, J. Duan, D. Lin, V. D. Calhoun, and Y.-P. Wang, "Sparse Representation Based

Biomarker Selection for Schizophrenia with Integrated Analysis of fMRI and SNP data," in

International Symposium on Biomedical Imaging: From Nano to Macro, 2013.

[348] E. Castro, M. Martinez-Ramon, K. A. Kiehl, and V. D. Calhoun, "A multiple kernel learning

approach to perform classification of groups from complex-valued fMRI data analysis:

application to schizophrenia," in Proc. HBM, Seattle, WA, 2013.

[349] M. Cetin, F. Christiansen, J. Stephen, A. Mayer, C. Abbott, and V. D. Calhoun, "Thalamus and

Wernicke’s area show heightened connectivity among individuals with schizophrenia during

resting state and task performance on a sensory load hierarchy," in International Congress on

Schizophrenia Research, Orlando Great Lakes, Florida, 2013.

[350] J. Chen, V. D. Calhoun, J. A. Turner, A. Arias-Velasquez, B. Franke, and J. Liu, "Parallel

Independent Component Analysis with Reference: A Semi-blind Multivariate Approach for

Voxelwise Genome-wide Association Study," in International Imaging Genetics Conference,

Irvine, CA, 2013.

[351] Z. Chen and V. D. Calhoun, "Numerical simulations of the effect of vessel orientation in BOLD

fMRI," in Proc. HBM, Seattle, WA, 2013.

[352] J. Chen, V. D. Calhoun, J. A. Turner, A. Arias-Vasquez, M. P. Zwiers, and J. Liu, "Scanning

Effects in Source-based Morphometry of Multi-site Studies," in Proc. HBM, Seattle, WA, 2013.

71


[353] Z. Chen and V. D. Calhoun, "4D magnetic susceptibility tomography for susceptibility-based

functional imaging," in Proc. HBM, Seattle, WA, 2013.

[354] N. Driesen, V. D. Calhoun, and J. Krystal, "NMDA Receptor Antagonist Ketamine Reduces

Prefrontal Activation and Connectivity," in Proc. HBM, Seattle, WA, 2013.

[355] J. Ford, D. Mathalon, V. Palzes, B. J. Roach, S. Potkin, T. van Erp, B. Turner, B. Mueller, J.

Voyvodic, V. D. Calhoun, A. Belger, and fBIRN, "Visual hallucinations are underpinned by

hyperconnectivity between visual cortical regions and amygdala and hippocampus.," in

Proc.ACNP, 2013.

[356] R. Gollub, J. M. Shoemaker, M. D. King, T. White, S. Ehrlich, S. Sponheim, V. P. Clark, J. A.

Turner, and V. D. Calhoun, "The MCIC collection: a shared repository of multi-modal, multi-site

brain image data from a clinical investigation of schizophrenia," in Proc. HBM, Seattle, WA,

2013.

[357] S. Gopal, V. D. Calhoun, A. Caprihan, A. Michael, J. Turner, S. A. Baum, and C. Abbott, "Fusion

of DTI and fMRI with Joint ICA differentiates remitters versus non-remitters for ECT," in Proc.

HBM, Seattle, WA, 2013.

[358] C. N. Gupta, V. D. Calhoun, J. Segall, L. Wang, O. Andreassen, I. Agartz, and J. Turner,

"Application of Source Based Morphometry for an Aggregated Gray Matter Dataset," in

International Congress on Schizophrenia Research, 2013.

[359] D. Hibar, V. Calhoun, and E. Consortium, "ENIGMA2: Genome-wide scans of subcortical brain

volumes in 16,125 subjects from 28 cohorts worldwide," in Proc. HBM, Seattle, WA, 2013.

[360] M. A. Hunter, V. P. Clark, V. D. Calhoun, and J. Canive, "Relationships between intrinsic

functional network connectivity and measures of attention in schizophrenia," in Proc. HBM,

Seattle, WA, 2013.

[361] S. Jamadar, J. Fielding, B. P. Johnson, V. D. Calhoun, and G. Egan, "Intrinsic Connectivity in

Resting-State Networks is Related to Antisaccade Task Performance," in ACNS-2013

Australasian Cognitive Neuroscience Society Conference, 2013.

[362] R. Kalyanam, D. Boutte, C. Gasparovic, K. E. Hutchison, and V. D. Calhoun, "Application of

independent component analysis to proton magnetic resonance spectroscopy," in Proc. HBM,

Seattle, WA, 2013.

[363] L. Kuang, Q. Lin, X. Gong, J. Fan, F. Cong, and V. D. Calhoun, "Multi-subject fMRI data

analysis: shift-invariant tensor factorization versus group independent component analysis," in

ChinaSIP, Beijing, China, 2013.

[364] S. Kyathanahally, N. Erbil, V. Calhoun, and G. Deshpande, "Investigation of the Neural Basis of

the Default Mode Network Using Parallel Independent Component Analysis of Simultaneous

EEG/fMRI Data " in ISMRM 2013, Salt Lake City, 2013.

[365] S. Kyathanahally, N. Erbil, A. Franco-Watkins, X. Zhang, V. Calhoun, and G. Deshpande, "A

Framework for Investigating Decision-Making in the Brain with High Spatio-Temporal

Resolution Using Simultaneous EEG/fMRI and Joint ICA," in ISMRM 2013, Salt Lake City,

2013.

[366] D. Lin, J. Zhang, J. Li, V. D. Calhoun, and Y.-P. Wang, "Identifying Genetic Connections with

Brain Functions in Schizophrenia using Group Sparse Canonical Correlation Analysis," in

International Symposium on Biomedical Imaging: From Nano to Macro, 2013.

[367] D. Lin, H. He, J. Li, H.-W. Deng, V. D. Calhoun, and Y.-P. Wang, "Network-based investigation

of genetic modules associated with functional brain networks in schizophrenia," in International

Workshop On Bioinformatics in Biomedical Imaging (BIBM), Shanghai, China, 2013.

[368] J. Liu, J. Chen, S. Ehrlich, E. Walton, T. White, and V. D. Calhoun, "Can DNA methylation from

blood indicate the status of schizophrenia patients?," in International Imaging Genetics

Conference, Irvine, CA, 2013.

[369] J. Liu, D. Boutte, E. Claus, V. D. Calhoun, and K. Hutchison, "Relationship of brain function

responding to alcohol and smoking cues during separate tasks," in Proc. HBM, Seattle, WA,

2013.

72


[370] J. Liu, D. Boutte, J. Chen, and V. D. Calhoun, "A three-modality parallel ICA method for

analyzing genetic effect on brain structure and functional variation," in Proc. HBM, Seattle, WA,

2013.

[371] S. Ma, R. Phlypo, V. D. Calhoun, and T. Adalı, "Capturing group variability using IVA: a

simulation study and graph-theoretical analysis," in ICASSP, Vancouver, Canada, 2013.

[372] C. M. Magcalas, N. Perrone-Bizzozero, V. D. Calhoun, J. Bustillo, and D. A. Hamilton,

"Examining Resting State Functional Network Connectivity and Behavioral Performance in a Rat

Chronically Exposed to Phencyclidine," in Society for Neuroscience, 2013.

[373] A. M. Michael, R. Miller, M. Anderson, T. Adalı, and V. D. Calhoun, "Capturing Inter-Subject

Variability in fMRI Networks: A Performance Evaluation of ICA and IVA " in Proc. HBM,

Seattle, WA, 2013.

[374] R. Miller and V. D. Calhoun, "Frequency Space Analysis Reveals Marked Differences in Whole

Brain Resting State Spatiotemporal Activation Patterns between Schizophrenia Patients and

Healthy Controls," in Proc. HBM, Seattle, WA, 2013.

[375] V. Potluru, S. M. Plis, J. Le Roux, B. Pearlmutter, V. D. Calhoun, and T. P. Hayes, "Block

Coordinate Descent for Sparse NMF," in ICLR, Scottsdale, AZ, 2013.

[376] S. Rachakonda and V. D. Calhoun, "Efficient Data Reduction in Group ICA Of fMRI Data," in

Proc. HBM, Seattle, WA, 2013.

[377] B. Rashid, E. Damaraju, and V. D. Calhoun, "Comparison of resting state dynamics in healthy,

schizophrenia and bipolar disease," in Proc. HBM, Seattle, WA, 2013.

[378] W. G. Roncal, Z. H. Koterba, D. Mhembere, D. M. Kleissas, J. T. Vogelstein, R. Burns, A. R.

Bowles, D. K. Donovos, S. Ryman, R. E. Jung, L. Wu, V. D. Calhoun, and R. J. Vogelstein,

"MIGRAINE: MRI Graph Reliability Analysis and Inference for Connectomics," in IEEE Global

SIP, Austin, Texas, 2013.

[379] W. G. Roncal, Z. H. Koterba, D. Mhembere, D. M. Kleissas, J. Vogelstein, R. Burns, A. R.

Bowles, D. K. Donavos, S. Ryman, R. E. Jung, L. Wu, V. Calhoun, and R. J. Vogelstein,

"MIGRAINE: MRI graph reliability analysis and inference for connectomics," in Global

Conference on Signal and Information Processing (GlobalSIP), Austin, Tx, 2013, pp. 313-316.

[380] C. Roth, D. Bridwell, S. M. Plis, C. Gupta, E. Damaraju, S. Khullar, and V. D. Calhoun, "The

Influence of Visuospatial Attention on Unattended Auditory Cortical Responses," in Proc. HBM,

Seattle, WA, 2013.

[381] R. Silva and V. D. Calhoun, "A Statistically Motivated Simulation Framework for Data Fusion

Models Applied to Neuroimaging," in Proc. HBM, Seattle, WA, 2013.

[382] J. M. Stephen, B. Coffman, J. Bustillo, C. J. Aine, and V. D. Calhoun, "Joint ICA Links DTI and

MEG to Cognitive Outcome in Schizophrenia," in Proc. HBM, Seattle, WA, 2013.

[383] J. Sui, H. He, Q. Yu, J. Chen, A. Mayer, and V. D. Calhoun, "Combination of Resting FMRI,

DTI and SMRI Data to Discriminate Schizophrenia by N-way MCCA+jICA," in Proc. HBM,

Seattle, WA, 2013.

[384] J. Turner, C. Wilhemi, G. E. Bigelow, J. Bustillo, J. M. Houck, V. D. Calhoun, and R. J. Thoma,

"Brain networks underlying active hallucinations during fMRI in schizophrenia," in Proc. HBM,

Seattle, WA, 2013.

[385] E. Walton, D. Geisler, P. H. Lee, J. Hass, J. A. Turner, J. Liu, S. Sponheim, T. Wassink, V.

Roessner, R. Gollub, V. D. Calhoun, and S. Ehrlich, "Prefrontal cortex activity is associated with

cumulative polygenetic risk in schizophrenia patients," in Proc. HBM, Seattle, WA, 2013.

[386] B. Weiland, A. Sabbineni, V. D. Calhoun, R. Wesh, and K. Hutchison, "Functional Connectivity

Dysfunction Relates to Alcohol Use Severity " in Proc. HBM, Seattle, WA, 2013.

[387] B. Weiland, A. Sabbineni, V. D. Calhoun, R. C. Welsh, A. Bryan, and K. Hutchison, "Reduced

Functional Connectivity in Executive Networks Associated with Cigarette and Alcohol Use," in

Proc.ACNP, 2013.

[388] S. T. Witt, V. D. Calhoun, and M. Stevens, "FNC of set-shifting," in Proc. HBM, Seattle, WA,

2013.

73


[389] R. Wolthusen, J. Hass, E. Walton, J. Turner, V. Rossner, S. Sponheim, B. Ho, D. Holt, R. Gollub,

V. D. Calhoun, and S. Ehrlich, "Genome-wide association study suggests novel loci associated

with left superior temporal gyrus thickness in schizophrenia patients," in Imaging Genetics,

Irvine, CA, 2013.

[390] C. Wright, V. S. Patel, V. D. Calhoun, S. Ehrlich, E. Walton, N. Perrone-Bizzozero, E. E.

Morrow, S. Schulz, and T. Wassink, "Gray matter effects of miR-137 putative targets involves in

axonal guidance," in UCI international imaging genetics conference, Irvine, CA, 2013.

[391] L. Wu, A. Caprihan, and V. D. Calhoun, "Connectivity Patterns Revealed by Whole Brain

Tractography Parcellation with Group ICA," in Proc. HBM, Seattle, WA, 2013.

[392] L. Wu, V. D. Calhoun, R. Jung, and A. Caprihan, "Whole Brain Parcellation Based on Group-

ICA of Tractography Connectivity Maps Shows Differences in Schizophrenia Subjects and

Healthy Controls," in ISMRM 2013, Salt Lake City, 2013.

[393] Q. Yu, J. Sui, K. A. Kiehl, G. Pearlson, and V. D. Calhoun, "Global and local brain networks

during resting state and an auditory oddball task in schizophrenia," in Proc. HBM, Seattle, WA,

2013.

[394] C. Abbott, T. Jones, N. Lemke, and V. D. Calhoun, "Electroconvulsive therapy response and

hippocampal resting state functional connectivity in older patients with major depressive

disorder!," in American Association of Geriatric Psychiatry, 2014.

[395] P. Acharjee, R. Phlypo, L. Wu, V. D. Calhoun, and T. Adalı, "EEG Gradient Artifact Removal

using Independent Vector Analysis," in ICASSP, Florence, Italy, 2014.

[396] O. Agcaoglu, R. Miller, and V. D. Calhoun, "Lateralization of Resting State Networks and

Relationship to Age and Gender," in Proceedings of the Organization of Human Brain Mapping,

Hamburg, Germany, 2014.

[397] M. Arbabshirani and V. D. Calhoun, "Accurate Classification of Schizophrenia Patients based on

Novel Resting-State fMRI Features," in EMBS, Chicago, IL, 2014.

[398] M. Arbabshirani, M. Pattichis, and V. D. Calhoun, "Detecting volumetric changes in fMRI

connectivity networks in schizophrenia patients," in EMBS, Chicago, IL, 2014.

[399] H. J. Bockholt, M. Scully, V. Calhoun, H. Johnson, J. Long, J. Turner, J. Paulsen, and T. P.-H. I.

a. Coordinators, "Using PREDICT-HD to develop a novel FOSS data mining extension to COINS

" in Proceedings of the Organization of Human Brain Mapping, Hamburg, Germany, 2014.

[400] D. Bridwell, K. A. Kiehl, G. Pearlson, and V. D. Calhoun, "Surprise! Relevance and Regularity

ERP Differences in Controls and Patients with Schizophrenia " in Proceedings of the

Organization of Human Brain Mapping, Hamburg, Germany, 2014.

[401] E. Castro, N. Cota, M. Martinez, V. D. Calhoun, and J. Turner, "Identification of Patterns of Gray

Matter Abnormalities in Schizophrenia using Source-Based Morphometry and Bagging," in

EMBS, Chicago, IL, 2014.

[402] E. Castro, C. N. Gupta, V. D. Calhoun, and J. Turner, "Gray Matter Anomalies Detection via

Multivariate Feature Selection: Classification of Schizophrenia," in Organization for Human

Brain Mapping, Hamburg, Germany, 2014.

[403] M. Cetin, F. Christensen, C. Abbott, J. Stephen, A. Mayer, J. Canive, J. Bustillo, G. Pearlson, and

V. D. Calhoun, "Thalamus and posterior temporal lobe show greater inter-network connectivity at

rest and across sensory paradigms in schizophrenia," in Proceedings of the Organization of

Human Brain Mapping, Hamburg, Germany, 2014.

[404] M. Cetin, S. Khullar, A. Michael, S. Baum, and V. D. Calhoun, "Enhanced disease biomarkers

through multi network functional normalization in fMRI," in Proceedings of the Organization of


[405] J. Chen, K. Hutchison, V. D. Calhoun, J. A. Turner, and J. Liu, "CREB-BDNF Guided

Exploration of Genomic Risk for Cue-Elicited Hyperactivation in Alcohol Dependence: A pICA-

MR Study," in 10th International Imaging Genetics Conference, Irvine, California, 2014.

74


[406] J. Chen, K. Hutchison, V. D. Calhoun, J. Turner, S. J., and J. Liu, "CREB-BDNF Guided

Exploration of Genomic Risk for Cue-Elicited Activation in Alcohol Dependence," in

Proceedings of the Organization of Human Brain Mapping, Hamburg, Germany, 2014.

[407] Z. Chen, A. Caprihan, and V. D. Calhoun, "4D magnetic susceptibility tomography reveals

bidirectional neurovascular magnetic susceptibility perturbation," in Proceedings of the

Organization of Human Brain Mapping, Hamburg, Germany, 2014.

[408] Z. Chen, A. Caprihan, and V. D. Calhoun, "A computational cortical vasculature model for

BOLD fMRI simulation," in Proceedings of the Organization of Human Brain Mapping,


[409] J. Chen, V. D. Calhoun, and J. Liu, "Multi-Reference Parallel ICA: A Semi-blind Multivariate

Approach," in EMBS, Chicago, IL, 2014.

[410] J. Ciarochi, S. M. Plis, J. Liu, V. D. Calhoun, H. J. Bockholt, H. Johnson, J. Long, J. Turner, and

J. Paulsen, "Voxel-Based Morphometry and Cognition in Prodromal Huntington's Disease," in


[411] N. Cota, V. Calhoun, and J. Turner, "Reality distortion symptoms correlate with source based

morphometry patterns in schizophrenia," in Society for Neuroscience, Washington, D. C., 2014.

[412] E. Damaraju, E. Allen, and V. D. Calhoun, "Impact of head motion on ICA-derived functional

connectivity measures " in Biennial Conference on Resting State / Brain Connectivity Boston,

MA, 2014.

[413] Y. Du, J. Sui, Q. Yu, H. He, and V. D. Calhoun, "Semi-supervised learning of brain functional

networks," in ISBI, Bejing, China, 2014.

[414] Y. Du, E. A. Allen, H. He, J. Sui, and V. D. Calhoun, "Comparison of ICA based fMRI artifact

removal: single subject and group approaches," in Proceedings of the Organization of Human


[415] Y. Du, J. Sui, Q. Yu, H. He, G. Pearlson, and V. D. Calhoun, "Brain functional networks based

discriminate analysis for schizophrenia, bipolar and schizoaffective disorders " in Proceedings of

the Organization of Human Brain Mapping, Hamburg, Germany, 2014.

[416] W. Du, S. Ma, F. Geng-Sheng, V. D. Calhoun, and T. Adalı, "A novel approach for assessing

reliability of ICA for fMRI analysis," in ICASSP, Florence, Italy, 2014.

[417] W. Du, G. Fu, V. D. Calhoun, and T. Adalı, "Performance of Complex-valued ICA Algorithms

for fMRI analysis: Importance of Taking Full Diversity into Account," in ICIP 2014, Paris,

France, 2014.

[418] Y. Du, E. Allen, H. He, S. J., and V. D. Calhoun, "Brain functional networks extraction based on

fMRI artifact removal: single subject and group approaches," in EMBS, Chicago, IL, 2014.

[419] Y. Du, J. Liu, S. J., H. He, G. Pearlson, and V. D. Calhoun, "Exploring difference and overlap

between schizophrenia, schizoaffective and bipolar disorders using resting-state brain functional

networks," in EMBS, Chicago, IL, 2014.

[420] S. Gopal, R. Miller, A. Michael, M. Cetin, S. Rachakonda, S. Baum, and V. D. Calhoun, "Inter

subject variability capture in IVA helps to detect spatial map differences between Schizophrenia

patients and Healthy Controls," in Proceedings of the Organization of Human Brain Mapping,


[421] S. Gopal, R. Miller, A. Michael, M. Cetin, S. Rachakonda, S. Baum, and V. D. Calhoun, "IVA to

detect spatial map differences between Schizophrenia patients and Healthy Controls," in ISMRM,

Milan, Italy, 2014.

[422] S. Gopal, R. Miller, A. Michael, T. Adalı, M. Cetin, S. Rachakonda, S. Baum, and V. D.

Calhoun, "A study of spatial variation in fMRI brain networks via independent vector analysis:

application to schizophrenia," in PRNI, Tubingen, Germany, 2014.

[423] A. Gupta, J. Chen, J. Turner, N. Perrone-Bizzozero, G. Pearlson, J. Liu, E. Damaraju, A. Michael,

and V. D. Calhoun, "Genetic Markers of White Matter Integrity in Schizophrenia Revealed by

Parallel ICA," in Proceedings of the Organization of Human Brain Mapping, Hamburg, Germany,

2014.

75


[424] H. He, J. Sui, Q. Yu, Y. Du, V. Vergara, T. Victor, W. C. Drevets, J. Savitz, and V. D. Calhoun,

"Analysis of functional network connectivity in bipolar and unipolar depression patients " in


[425] H. He, J. Sui, Q. Yu, Y. Du, T. Victor, W. C. Drevets, J. Savitz, and V. D. Calhoun, "Fusion of

FNC and structural MRI: an application to bipolar and major depression patients," in Proceedings

of the Organization of Human Brain Mapping, Hamburg, Germany, 2014.

[426] J. M. Houck, M. Cetin, A. Mayer, J. Bustillo, M. Brookes, and V. D. Calhoun, "Comparison of

resting intrinsic connectivity networks in schizophrenia and healthy controls computed via group

spatial ICA of MEG and fMRI data," in Proceedings of the Organization of Human Brain

Mapping, Hamburg, Germany, 2014.

[427] M. H. Hunter, V. P. Clark, V. D. Calhoun, C. Wootton, Y. Chen, J. C. Edgar, M. X. Huang, B.

Howell, and J. Canive, "Intrinsic network connectivity differentially predicts sub-components of

executive functioning in patients with schizophrenia and bipolar disorder," in Biennial

Conference on Resting State / Brain Connectivity Boston, MA, 2014.

[428] R. Huster, S. M. Plis, C. Lavalle, and V. D. Calhoun, "Functional and effective connectivity

underlying behavioral inhibition," in Proceedings of the Organization of Human Brain Mapping,


[429] C. J. Hyatt, V. D. Calhoun, G. D. Pearlson, and M. Assaf, "Interactive game and semantic

memory tasks show opposing modulation of functional connectivity in default mode networks

underlying mentalizing processes," in Biennial Conference on Resting State / Brain Connectivity

Boston, MA, 2014.

[430] L. Kuang, Q. Lin, X. Gong, F. Cong, and V. D. Calhoun, "A Sub-Group Tensor Method for

Multi-Subject FMRI Analysis," in ISBI, Beijing, China, 2014.

[431] Y. Levin-Schwartz, V. D. Calhoun, and T. Adalı, "Data-driven fusion of EEG, functional and

structural MRI: a comparison of two models," in Conferences on Information Science and

Systems (CISS), Baltimore, MD, 2014.

[432] D. Lin, H.-W. Deng, V. D. Calhoun, and Y.-P. Wang, "Detection of genes associated with

multiple correlated imaging phenotypes by a sparse group-ridge low-rank regression model " in

MICGen, 2014.

[433] K. K. Lottman, D. M. White, N. V. Kraguljac, V. D. Calhoun, and A. C. Lahti, "Assessment of

Dynamic Functional Connectivity in Patients with Schizophrenia," in International Congress on

Schizophrenia Research (ICOSR), Colorado Springs, Colorado, 2014.

[434] M. Maurer, L. M. Cope, V. Steele, V. Calhoun, and K. A. Kiehl, "Dysfunctional error-related

event-related potentials (ERPs) in incarcerated adolescents with psychopathic traits," in Cognitive

Neuroscience Society, Boston, MA, 2014.

[435] A. Michael, M. Anderson, R. Miller, T. Adalı, and V. Calhoun, "Application of independent

vector analysis for resting state fMRI can better preserve subject specific features," in Biennial

Conference on Resting State / Brain Connectivity Boston, MA, 2014.

[436] R. Miller, M. Yaesoubi, and V. D. Calhoun, "Higher Dimensional fMRI Connectivity Dynamics

Show Reduced Dynamism in Schizophrenia Patients," in PRNI, Tubingen, Germany, 2014.

[437] R. Miller, M. Yaesoubi, and V. D. Calhoun, "Meta-state analysis reveals reduced resting fMRI

connectivity dynamism in schizophrenia across multiple multivariate analytic techniques," in

Biennial Conference on Resting State / Brain Connectivity Boston, MA, 2014.

[438] R. Miller and V. D. Calhoun, "Higher-Dimensional Meta-State Analysis of Resting fMRI Reveals

Reduced 4D Spatiotemporal Spectral Dynamism in Schizophrenia," in EMBS, Chicago, IL, 2014.

[439] R. Miller and V. D. Calhoun, "Meta-state analysis reveals reduced resting fMRI connectivity

dynamism in schizophrenia, with dynamic fluidity and range further suppressed by many

individual symptoms," in Society for Neuroscience, Washington, D. C., 2014.

[440] R. Miller, M. Yaesoubi, and V. D. Calhoun, "Higher Dimensional Analysis Shows Reduced

Dynamism of Time-Varying Network Connectivity in Schizophrenia Patients," in EMBS,

Chicago, IL, 2014.

76


[441] R. Miller and V. D. Calhoun, "Approaches for Capturing Dynamic Connectivity States in fMRI

data," in 48th Asilomar Conference on Signals, Systems and Computers Pacific Grove, CA, 2014.

[442] S. M. Plis, D. Hjelm, R. R. Salakhutdinov, and V. D. Calhoun, "Deep learning for neuroimaging:

a validation study," in International Conference on Learning Representation (ICLR), Banff,

Canada, 2014.

[443] S. M. Plis, R. D. Hjelm, R. R. Salakhutdinov, and V. D. Calhoun, "Deep learning models for

brain imaging: model depth enhances discovery power," in Proceedings of the Organization of


[444] S. M. Plis, A. D. Sarwate, J. Turner, M. Arbabshirani, and V. D. Calhoun, "Privacy preserving

classification from distributed neuroimaging data," in Proceedings of the Organization of Human


[445] S. M. Plis, A. D. Sarwate, J. Turner, M. Arbabshirani, and V. D. Calhoun, "From private sites to

big data without compromising privacy: a case of neuroimaging data classification," in ISPOR,

Montreal, Canada, 2014.

[446] V. Potluru, J. Diaz-Montes, A. D. Sarwate, S. M. Plis, V. D. Calhoun, B. Pearlmutter, and M.

Parashar, "CometCloudCare (C3): Distributed Machine Learning Platform-as-a-Service with

Privacy Preservation," in Neural Information Processing Systems (NIPS), Montreal, Canada,

2014.

[447] C. Roth, D. Bridwell, N. Gupta, K. A. Kiehl, G. Pearlson, and V. D. Calhoun, "Reduced Auditory

Regularity Sensitivity in Schizophrenia: Wavelet Analysis of Oddball ERP's," in Proceedings of

the Organization of Human Brain Mapping, Hamburg, Germany, 2014.

[448] R. Silva, S. M. Plis, T. Adalı, and V. D. Calhoun, "Multidataset Independent Subspace Analysis,"

in Proceedings of the Organization of Human Brain Mapping, Hamburg, Germany, 2014.

[449] R. Silva, S. M. Plis, T. Adalı, and V. D. Calhoun, "Multidataset Independent Subspace Analysis

Extends Independent Vector Analysis," in ICIP 2014, Paris, France, 2014.

[450] R. Silva, E. Castro, N. Gupta, M. Cetin, M. Arbabshirani, V. Potluru, S. M. Plis, and V. D.

Calhoun, "The Tenth Annual MLSP Competition: Schizophrenia Classification Challenge," in

IEEE International Workshop on Machine Learning for Signal Processing, Reims, France, 2014.

[451] J. Sui, H. He, Y. Du, Q. Yu, J. Chen, E. Castro, D. Bridwell, G. Pearlson, and V. D. Calhoun,

"Fusion of FMRI-sMRI-EEG by Ensemble Feature Selection Improves Classification of

Schizophrenia " in Proceedings of the Organization of Human Brain Mapping, Hamburg,

Germany, 2014.

[452] J. Sui, E. Castro, H. He, D. Bridwell, Y. Du, G. Pearlson, and V. D. Calhoun, "Combination of

FMRI-SMRI-EEG Data Improves Discrimination of Schizophrenia Patients by Ensemble Feature

Selection," in EMBS, Chicago, IL, 2014.

[453] A. Ulloa, V. Vergara, J. Chen, V. D. Calhoun, and J. Liu, "Three-way Parallel Independent

Component Analysis for Imaging Genetics Using Multi-Objective Optimization," in EMBS,

Chicago, IL, 2014.

[454] A. Ulloa, P. Rodriguez, J. Liu, V. D. Calhoun, and M. Pattichis, "A Quasi-Local Method for

Instantaneous Frequency Estimation With Application to Structural Magnetic Resonance

Images," in EMBS, Chicago, IL, 2014.

[455] V. Vergara, V. D. Calhoun, K. Hutchison, and J. Liu, "Resting State Functional Connectivity of

Drinkers and Smokers," in Proceedings of the Organization of Human Brain Mapping, Hamburg,

Germany, 2014.

[456] L. Wang, S. Potkin, D. Keator, D. Landis, V. Calhoun, J. L. Ambite, K. Alpert, M. Tallis, M.

King, and J. Turner, "Schizconnect: Large-scale Schizophrenia Neuroimaging Data Integration

and Sharing," in Proc. ACNP, Phoenix, AZ, 2014.

[457] B. Weiland, A. Sabbineni, V. D. Calhoun, R. Wesh, and K. Hutchison, "Reduced Cortical

Volumes Associated with Functional Connectivity Dysfunction and Alcohol Use Severity " in


77


[458] M. Yaesoubi, R. Miller, and V. D. Calhoun, "Temporally independent connectivity patterns: A

new perspective on the study of human brain dynamics," in Proceedings of the Organization of


[459] Q. Yu, J. Sui, R. D. Hjelm, Y. Du, H. He, G. Pearlson, and V. D. Calhoun, "Tracking changes in

graph metrics during Rest fMRI: application to healthy controls and patients with schizophrenia,"

in Proceedings of the Organization of Human Brain Mapping, Hamburg, Germany, 2014.

[460] Q. Yu, E. Erhardt, and V. D. Calhoun, "Characterizing Dynamic Brain Graphs in fMRI Data:

Application to Schizophrenia," in Biennial Conference on Resting State / Brain Connectivity

Boston, MA, 2014.

[461] O. Agcaoglu, R. Miller, and V. D. Calhoun, "A 4D Frequency Domain Approach to Cerebral

Lateralization at Rest," in Annual Meeting of the Organization for Human Brain Mapping,

Honolulu, HI, 2015.

[462] O. Agcaoglu, R. Miller, M. Cetin, and V. D. Calhoun, "Connectivity Differences between

Cerebral Hemispheres at Rest," in Annual Meeting of the Organization for Human Brain

Mapping, Honolulu, HI, 2015.

[463] F. Amin, S. Plis, E. Damaraju, D. Hjelm, K. Cho, and V. D. Calhoun, "A deep-learning approach

to translate between brain structure and brain function," in Pattern Recognition in NeuroImaging

(PRNI), Palo Alto, CA, 2015.

[464] M. Arbabshirani, A. Preda, J. Vaidya, S. Potkin, G. Pearlson, J. Voyvodic, K. A. Kiehl, J. Turner,

and V. D. Calhoun, "Autoconnectivity: A New Perspective on Human Brain Function," in Annual

Meeting of the Organization for Human Brain Mapping, Honolulu, HI, 2015.

[465] B. Baker, R. Silva, V. D. Calhoun, A. D. Sarwate, and S. Plis, "Large scale collabortion with

autonomy: decentralized data ICA," in IEEE Machine Learning for Signal Processing Workshop,

Boston, MA, 2015.

[466] D. Bridwell, C. Roth, N. Gupta, and V. D. Calhoun, "Lights, Camera, Inter-Subject Correlation's

and Action! EEG ISC magnitudes depend on movie content," in Annual Meeting of the

Organization for Human Brain Mapping, Honolulu, HI, 2015.

[467] D. Bridwell, V. Steele, J. M. Maurer, K. A. Kiehl, and V. D. Calhoun, "The relationship between

somatic and cognitive-affective depression symptoms and cognitive control," in Annual Meeting

of the Organization for Human Brain Mapping, Honolulu, HI, 2015.

[468] V. Calhoun, C. Gupta, J. Chen, V. Patel, J. Liu, J. Segall, B. Franke, S. Fischer, G. Fernandez, T.

Van Erp, S. Potkin, J. Ford, D. Mathalon, S. McEwen, J. Hyo, B. Mueller, D. Greve, O.

Andreassen, I. Agartz, R. Gollub, S. Sponheim, S. Ehrlich, L. Wang, G. Pearlson, D. Glahn, E.

Sprooten, A. Mayer, J. Stephen, J. Bustillo, and J. Turner, "Reliable patterns of GMC differences

which could be targeted in the development of drugs for schizophrenia," in ACNP, Hollywood,

Florida, 2015.

[469] V. Calhoun, E. Sprooten, N. Cota, E. E. Knowles, R. McKay, S. R. Mathias, J. Curran, J. Kent,

M. Carless, T. Dyer, H. Goring, R. Olvera, P. Kochunov, P. Fox, L. Almasy, R. Duggirala, J.

Blangero, J. Turner, and D. Glahn, "Structural Imaging Patterns Linked to 12q24," in ACNP,

Hollywood, Florida, 2015.

[470] V. Calhoun, "Chronnectomics of Schizophrenia: Time-Varying Connectivity Approaches to

Characterize Early Onset and Prodromal Schizophrenia," in Molecular Psychiatry Meeting, San


[471] E. Castro, A. Ulloa, S. M. Plis, J. Turner, and V. D. Calhoun, "Simulation of structural magnetic

resonance images for deep learning pre-training," in IEEE International Symposium on

Biomedical Imaging, New York, NY, 2015.

[472] E. Castro, D. Hjelm, S. Plis, L. Dinh, J. Turner, and V. D. Calhoun, "Independent component

estimation of simulated structural magnetic resonance imaging data using deep learning," in IEEE

Machine Learning for Signal Processing Workshop, Boston, MA, 2015.

78


[473] M. Cetin, A. Mueen, and V. D. Calhoun, "Shapelet ensemble for multi-dimensional time series,"

in SIAM International Conference on Data Mining (SDM), Vancouver, British Columbia,

Canada, 2015.

[474] M. Cetin, J. M. Stephen, and V. D. Calhoun, "Sensory load hierarchy-based classification of

schizophrenia patients," in Proceedings ICIP, Quebec City, Canada, 2015.

[475] M. Cetin, J. M. Houck, and V. D. Calhoun, "Multimodal - Based Classification of Schizophrenia

Patients," in EMBC, Milan, Italy, 2015.

[476] C. Chaze, V. Clark, J. Turner, M. Hunter, R. Bigelow, J. Long, J. D. Lewine, V. D. Calhoun, and

R. J. Thoma, "An fMRI Investigation of tDCS-induced Changes in Cortical Function During

Auditory Verbal Hallucinations," in International Congress on Schizophrenia Research (ICOSR),

Colorado Springs, CO, 2015.

[477] Z. Chen, J. Robinson, A. Caprihan, and V. D. Calhoun, "Intrinsic motor cortex functional

mapping in reconstructed 4D magnetic susceptibility data space using hi-resolution (0.5mm in-

plane) 7T data," in Annual Meeting of the Organization for Human Brain Mapping, Honolulu,

HI, 2015.

[478] J. Chen, V. D. Calhoun, N. Perrone-Bizzozero, J. Sui, J. A. Turner, Y. Du, and J. Liu,

"Commonality and Specificity between Schizophrenia and Bipolar Disorder in Copy Number

Variations," in Annual Meeting of the Organization for Human Brain Mapping, Honolulu, HI,

2015.

[479] Z. Chen and V. Calhoun, "Multiresolution ICA on task-evoked fMRI T2* images and

reconstructed magnetic susceptibility (chi) sources," in Pattern Recognition in NeuroImaging

(PRNI), Palo Alto, CA, 2015.

[480] S. Clark, A. Ahmadi, N. Cota, J. Bustillo, V. D. Calhoun, and J. Turner, "An investigation of

structure and function in relation to insight in schizophrenia," in Annual Meeting of the


[481] E. Damaraju, E. Tagliazucchi, H. Laufs, and V. D. Calhoun, "Dynamic functional network

connectivity from rest to sleep," in OHBM, Honolulu, HI, 2015.

[482] D. Danks, S. Plis, C. Freeman, A. Caprihan, and V. D. Calhoun, "Successfully learning networks

from undersampled neuroimaging data," in Pattern Recognition in NeuroImaging (PRNI), Palo

Alto, CA, 2015.

[483] Y. Du, H. He, L. Wu, Q. Yu, J. Sui, and V. D. Calhoun, "Dynamic default mode network

connectivity diminished in patients with schizophrenia," in IEEE International Symposium on

Biomedical Imaging, New York, NY, 2015.

[484] Y. Du, G. Pearlson, H. He, L. Wu, J. Chen, and V. D. Calhoun, "Identifying brain dynamic

network states via GIG-ICA: application to schizophrenia, bipolar, and schizoaffective disorders,"

in IEEE International Symposium on Biomedical Imaging, New York, NY, 2015.

[485] Y. Du, G. D. Pearlson, H. He, L. Wu, J. Sui, J. Chen, Q. Yu, and V. D. Calhoun, "Dynamic

functional network states differ among schizophrenia, bipolar and schizoaffective disorders," in

Annual Meeting of the Organization for Human Brain Mapping, Honolulu, HI, 2015.

[486] S. Gopal, R. Miller, S. Baum, and V. D. Calhoun, "Spatial variability differences in intrinsic

networks identified in healthy controls versus schizophrenia patients," in Annual Meeting of the


[487] H. He, M. Hunter, B. Yackley, Q. Yu, J. Sui, V. P. Clark, V. D. Calhoun, and T. Lane, "Effective

connectivity and dynamic FNC provide a marker for relapse in recently abstinent stimulant

dependent patients," in Annual Meeting of the Organization for Human Brain Mapping,

Honolulu, HI, 2015.

[488] D. Hjelm, E. Castro, S. M. Plis, and V. D. Calhoun, "Nonlinear ICA of structural MRI data: A

deep learning approach," in Annual Meeting of the Organization for Human Brain Mapping,

Honolulu, HI, 2015.

[489] J. M. Houck, J. S. Lewin, J. Turner, V. P. Clark, J. Bustillo, V. D. Calhoun, and R. J. Thoma,

"MEG Analysis of Network Oscillatory Activity During The Transition into Auditory Verbal

79


Hallucinations (AVH-on) and Out of (AVH-off) Transitional Periods " in International Congress

on Schizophrenia Research (ICOSR), Colorado Springs, CO, 2015.

[490] J. M. Houck, A. Mayer, C. D. Tesche, and V. D. Calhoun, "Hybrid approach to detecting

dynamic functional connectivity in resting magnetoencephalography data," in Annual Meeting of

the Organization for Human Brain Mapping, Honolulu, HI, 2015.

[491] M. Hunter, V. Clark, V. D. Calhoun, H. He, B. Yackley, and T. Lane, "Dynamic causal modeling

of selective attention predicts relapse in patients recovering from addiction," in INS, Denver, CO,

2015.

[492] N. Jie, E. Osuch, M. Zhu, X. Ma, M. Wammer, T. Jiang, J. Sui, and V. D. Calhoun,

"Discriminating bipolar disorder from major depression using whole-brain functional

connectivity: a feature selection analysis with the SVM-Foba algorithm," in IEEE Machine

Learning for Signal Processing Workshop, Boston, MA, 2015.

[493] S. Kelly, N. Jahanshad, I. Agartz, O. Andreassen, H. Fatouros-Bergman, R. Brouwer, V. D.

Calhoun, D. Cannon, G. Castrillon, C. Chiapponi, N. Doan, S. Ehrlich, B. Crespo-Facorro, L.

Flyckt, M. Fukunaga, D. Glahn, R. Gollub, R. Gur, R. Hashimoto, s. Hatton, D. P. Hibar, I. B.

Hickie, J. Horacek, C. Jaramillo, E. Jonsson, C. Knochel, V. Oertel-Knochel, M. Kubicki, Z.

Kikinis, C. Langen, J. Lagopoulos, A. Lyall, V. Magnotta, C. McDonald, T. Melicher, D. Nowell,

O. Pasternak, F. Piras, G. Pearlson, H. E. Hulshoff Pol, D. Roalf, R. Roiz, P. De Rossi, D.

Rotenberg, T. D. Satterthwaite, G. Spalletta, F. Spaniel, M. Stablein, D. Tordesillas, A. Vanegas,

C. Vargas, A. Voineskos, L. T. Westlye, T. White, J. Zhao, P. Thompson, J. Turner, G. Donohoe,

and E. S. D. W. Group, "White matter microstructural differences in schizophrenia: meta-analytic

findings from the ENIGMA schizophrenia DTI working group," in Annual Meeting of the


[494] Y. Levin-Schwartz, T. Adalı, and V. D. Calhoun, "Multivariate Fusion of EEG and Functional

MRI Data using ICA: Algorithm Choice and Performance Analysis," in 12th International

Conference on Latent Variable Analysis and Signal Separation, 2015.

[495] D. Lin, J. Li, V. D. Calhoun, and Y. P. Wang, "Detection of genetic factors associated with

multiple correlated imaging phenotypes by a sparse regression model," in IEEE International

Symposium on Biomedical Imaging, New York, NY, 2015.

[496] D. Lin, J. Li, V. D. Calhoun, and Y.-P. Wang, "Correlated Imaging Phenotypes by a Sparse

Regression Model," in International Symposium on Biomedical Imaging, New York, NY, 2015.

[497] J. Liu, P. Julnes, J. Chen, S. Ehrlich, E. Walton, and V. D. Calhoun, "The association of

peripheral blood methylation and brain volume in healthy individuals and schizophrenia

patients," in Annual Meeting of the Organization for Human Brain Mapping, Honolulu, HI, 2015.

[498] J. Liu, J. Chen, N. Perrone-Bizzozero, J. Turner, and V. D. Calhoun, "Common and distinct

genetic risks for schizophrenia and bipolar disorder," in Annual Meeting of the Organization for

Human Brain Mapping, Honolulu, HI, 2015.

[499] J. Liu, J. Chen, and V. D. Calhoun, "Parallel Group ICA for Multi-Modal Biomedical Data

Analyses," in IEEE International Conference on Bioinformatics and Biomedicine (BIBM):

Workshop on Data Mining in Translational Biomedical Informatics, Washington, D.C., 2015.

[500] D. McCoy, A. Gonzales, R. E. Jacobs, V. D. Calhoun, and E. L. Bearer, "Secondary Data

Analysis of SERT Knockout and Wild-type Mice using FastICA to Isolate Active Circuitry " in

Society for Neuroscience, 2015.

[501] X. Meng, J. Sui, J. Bustillo, K. Xu, Y. Zhang, T. Jiang, and V. D. Calhoun, "Predicting Cognitive

Scores of Schizophrenia by 3-Way Multimodal Fusion of MRI data," in Annual Meeting of the


[502] R. Miller and V. Calhoun, "Data fusion for multimodal multi-feature brain data using Markov-

style dynamics in a feature meta-space," in Pattern Recognition for NeuroImaging (PRNI), Palo

Alto, CA, 2015.

80


[503] R. Miller and V. D. Calhoun, "Directional fMRI Network Connectivity Analysis Reveals

Asymmetric Information Flows in Schizophrenia," in Annual Meeting of the Organization for


[504] R. Miller, Calhoun V. D., "Large Scale Fusion of Brain Imaging Modalities and Features Using

Markov-Style Dynamics in a Feature Meta-Space," in EMBC, Milan, Italy, 2015.

[505] M. Misiura, J. Kim, H. J. Bockholt, J. Turner, J. Paulsen, V. D. Calhoun, J. Long, H. Johnson,

and P.-H. Study, "Prodromal Huntington's disease neuropsychiatric variable clusters predict brain

volumes," in Annual Meeting of the Organization for Human Brain Mapping, Honolulu, HI,

2015.

[506] J. Nomi, K. Farrant, E. Damaraju, S. Rachakonda, V. D. Calhoun, and L. Q. Uddin, "Static and

Transient Functional Connections of Insula Subregions," in Annual Meeting of the Organization

for Human Brain Mapping, Honolulu, HI, 2015.

[507] V. Patel, C. Gupta, W. Jiang, E. Walton, S. Ehrlich, I. Agartz, L. T. Westlye, O. Andreassen, J.

Bustillo, N. Perrone-Bizzozero, V. D. Calhoun, and J. Turner, "Genetic pathways associated with

source-based morphometry measures in schizophrenia," in ICOSR, Colorado Springs, CO, 2015.

[508] V. Pinto-Plata, Y. Tesfaigzi, V. D. Calhoun, C. Prilolo, J. Sui, M. J. McGeachi, C. Casanova, J.

De Torres, J. M. Marin, C. Owen, and B. Celli, "Metabolomics in COPD. A tool to predict

survival," in American Thoracic Society, 2015.

[509] S. M. Plis, D. Bridwell, R. Huster, E. Damaraju, and V. D. Calhoun, "EEG independent

topographies match to electrode-space projections of fMRI default mode networks," in Annual

Meeting of the Organization for Human Brain Mapping, Honolulu, HI, 2015.

[510] S. M. Plis, D. Danks, C. Freeman, and V. D. Calhoun, "Rate-Agnostic (Causal) Structure

Learning," in NIPS, 2015.

[511] B. Rashid, M. Arbabshirani, E. Damaraju, R. Miller, M. Cetin, G. Pearlson, and V. D. Calhoun,

"Classification of schizophrenia and bipolar patients using static and time-varying resting-state

fMRI brain connectivity," in IEEE International Symposium on Biomedical Imaging, New York,

NY, 2015.

[512] B. Rashid, M. Arbabshirani, E. Damaraju, R. Miller, M. Cetin, G. Pearlson, and V. D. Calhoun,

"Automatic Classification of Schizophrenia and Bipolar Disorder Using Static and Dynamic

Connectivity Features," in Annual Meeting of the Organization for Human Brain Mapping,

Honolulu, HI, 2015.

[513] D. Reyes, K. A. Kiehl, and V. D. Calhoun, "Changes in Intrinsic Functional Brain Networks

Associated with the Presence of Psychopathy," in UNM Biiomedical Symposium, Albuquerque,

NM, 2015.

[514] R. Silva, S. Plis, M. Pattichis, T. Adalı, and V. D. Calhoun, "Incorporating Second-Order

Statistics in Multidataset Independent Subspace Analysis," in Annual Meeting of the


[515] V. Steele, E. Claus, B. Fink, J. Maurer, M. Arbabshirani, V. Rao, V. D. Calhoun, and K. A.

Kiehl, "Functional magnetic resonance imaging measures of network connectivity related to

incorrect responses predict completion of substance abuse treatment," in Society for

Neuroscience, 2015.

[516] J. Sui, T. Jones, Q. Yu, Y. Du, J. Chen, L. Fan, T. Jiang, J. Bustillo, and V. D. Calhoun,

"Searching MRI Biomarkers of Cognitive Deficits in Schizophrenia By Three-way Multimodal

Fusion," in Annual Meeting of the Organization for Human Brain Mapping, Honolulu, HI, 2015.

[517] A. Ulloa, S. Plis, E. Erhardt, and V. D. Calhoun, "Synthetic structural magnetic resonance image

generator improves deep learning prediction of schizophrenia," in IEEE Machine Learning for

Signal Processing Workshop, Boston, MA, 2015.

[518] T. Van Erp, D. P. Hibar, J. Rasmussen, D. Glahn, G. Pearlson, O. Andreassen, I. Agartz, L. T.

Westlye, U. K. Haukvik, A. M. Dale, I. Melle, C. Hartberg, O. Gruber, B. Kraemer, D. Zilles, G.

Donohoe, S. Kelly, C. McDonald, D. Morris, D. Cannon, A. Corvin, M. Machielsen, L.

Koenders, E. H. De Haan, D. Veltman, T. D. Satterthwaite, D. H. Wolf, R. Gur, R. Gur, S.

81


Potkin, D. Mathalon, B. Mueller, A. Preda, F. Macciardi, S. Ehrlich, E. Walton, J. Hass, V. D.

Calhoun, H. J. Bockholt, S. Sponheim, J. M. Shoemaker, N. van Haren, H. E. Hulshoff Pol, R.

Ophoff, R. Kahn, R. Roiz-Santianez, B. Crespo-Facorro, L. Wang, K. Alpert, E. Jonsson, R.

Dimitrova, C. Bois, H. Whalley, A. McIntosh, S. Lawrie, R. Hashimoto, P. Thompson, J. Turner,

and f. t. E. S. W. Group, "ENIGMA Schizophrenia Working Group Brain Volume Comparison

between 2,028 Cases and 2,540 Controls," in Annual Meeting of the Organization for Human

Brain Mapping, Honolulu, HI, 2015.

[519] T. Van Erp, A. Preda, J. Turner, S. Callahan, V. Calhoun, J. Bustillo, K. Kim, B. Mueller, G.

Brown, C. J. Vaidya, S. McEwen, A. Belger, J. Voyvodic, D. Mathalon, D. D. Nguyen, J. Ford,

S. Potkin, and F. BIRN, "Neuropsychological Profile in Adult Schizophrenia Measured with the

CMINDS," in ACNP, Hollywood, Florida, 2015.

[520] V. Vergara, B. Weiland, K. Hutchison, and V. D. Calhoun, "Dynamic Functional Network

Connectivity in the Brain of Nicotine and Alcohol Users," in Annual Meeting of the Organization

for Human Brain Mapping, Honolulu, HI, 2015.

[521] V. Vergara, A. Mayer, K. A. Kiehl, and V. D. Calhoun, "Diagnosis of Mild Traumatic Brain

Injury using Resting State Functional Network Connectivity," in Annual Meeting of the


[522] V. Vergara, A. Mayer, and V. D. Calhoun, "The Impact of Data Preprocessing in Traumatic Brain

Injury Diagnosis using Functional Magnetic Resonance Imaging," in EMBC, Milan, Italy, 2015.

[523] C. Wright, C. N. Gupta, J. Chen, V. Patel, V. D. Calhoun, S. Ehrlich, L. Wang, J. Bustillo, N.

Perrone-Bizzozero, and J. Turner, "Polymorphisms within microRNA-137 regulated genes

together with the MIR137 risk variant, rs1625579, influence gray matter structure in

schizophrenia," in International Imaging Genetics Conference (IIGC), Irvine, CA, 2015.

[524] L. Wu, A. Caprihan, and V. D. Calhoun, "Is functional signal directional? – a preliminary study

on diffusivities in functional DTI," in Annual Meeting of the Organization for Human Brain

Mapping, Honolulu, HI, 2015.

[525] M. Yaesoubi, R. Miller, and V. D. Calhoun, "Dynamic coherence analysis of rest fMRI with state

specific phase, frequency and temporal profile," in Annual Meeting of the Organization for


[526] Q. Yu, L. Wu, D. Bridwell, E. Erhardt, Y. Du, H. He, J. Sui, G. Pearlson, and V. D. Calhoun,

"Concurrent EEG-fMRI multi-modal brain graph," in Human Brain Mapping, Honolulu, HI,

2015.

[527] A. Abrol, C. Chaze, E. Damaraju, and V. D. Calhoun, "The Chronnectome: Replicability of

Dynamic Connectivity Patterns in 7500 Resting fMRI Datasets," in IEEE Engineering in

Medicine and Biology Conference, Orlando, FL, 2016.

[528] A. Abrol, E. Damaraju, and V. Calhoun, "Modelling similarity statistics in the chronnectome to

quantify replicability of dynamic connectivity patterns in 7500 resting fMRI datasets," in Fifth

Biennial Conference on Resting-State and Brain Connectivity, Vienna, 2016.

[529] O. Agcaoglu, B. Rashid, M. Arbabshirani, and V. D. Calhoun, "Improved Classification of

Schizophrenia using Hemisphere Specific Static and Dynamic Functional Network Connectivity,"

in Human Brain Mapping, Geneva, Switzerland, 2016.

[530] D. Bridwell, S. Rachakonda, R. Silva, G. Pearlson, and V. D. Calhoun, "Deriving Distinct EEG

Spatiospectral Maps with Multi-Subject Blind Source Separation," in Human Brain Mapping,

Geneva, Switzerland, 2016.

[531] Z. Chen and V. D. Calhoun, "Linear Inverse MRI Approximation from Nonlinear MRI," in SIAM

Conference on Imaging Science, Albuquerque, NM, 2016.

[532] Z. Chen, A. Caprihan, and V. D. Calhoun, "Reconstructing full brain electromagnetic property

maps (conductivity, permittivity, susceptibility) from GRE initial phase images," in Human Brain

Mapping, Geneva, Switzerland, 2016.

82


[533] J. Ciarochi, V. D. Calhoun, H. J. Bockholt, H. Johnson, J. Long, S. Plis, J. Liu, J. Turner, and J.

Paulsen, "Gray matter network contributions to changes in clinical functioning in prodromal

Huntington's disease," in Human Brain Mapping, Geneva, Switzerland, 2016.

[534] N. Cota, A. Arias-Vasquez, J. Liu, O. Andreassen, I. Agartz, V. D. Calhoun, and J. Turner,

"Canonicality of Structural patterns using Source Based Morphometry," in Human Brain


[535] E. Damaraju, M. Lentz, J. D. Lewine, D. M. Thomasson, N. Bassou, A. Honko, V. D. CAlhoun,

and P. Jahrling, "Ebola Alters Resting-State Functional Connectivity In Some, But Not All,

Networks In The Macaque Brain," in ISMRM, Singapore, 2016.

[536] E. Damaraju, J. Phillips, J. Lowe, V. D. Calhoun, R. Ohls, and A. Caprihan, "Functional

connectivity differences in Preterm Infants treated with Darbepoetin, Erythropoietin or placebo

compared to Term Infants," in Human Brain Mapping, Geneva, Switzerland, 2016.

[537] E. Damaraju, R. Miller, D. Hjelm, and V. D. Calhoun, "Connectivity dynamics from wakefulness

to sleep," in Asilomar Conference on Signals, Systems and Computers, Pacific Grove, California,

2016.

[538] N. DeLacy and V. D. Calhoun, "The chronnectomics of autism," in Human Brain Mapping,


[539] S.-P. Deng, D. Lin, V. D. Calhoun, and Y.-P. Wang, "Predicting Schizophrenia by Fusing

Networks from SNPs, DNA Methylation and fMRI Data," in IEEE Engineering in Medicine and

Biology Conference, Orlando, FL, 2016.

[540] S.-P. Deng, D. lin, V. D. Calhoun, and Y.-P. Wang, "Gene discovery for Schizophrenia by

mining the minimum spanning trees from multi-omics data integration," in IEEE International

Conference on Bioinformatics and Biomedicine (BIBM) Workshop on Integrative Data Analysis

in Systems Biology Shenzhen, China, 2016.

[541] S.-P. Deng, D. Lin, V. D. Calhoun, and Y.-P. Wang, "Diagnosing Schizophrenia by Integrating

Genomic and Imaging Data through Network Fusions," in IEEE BIBM, Shenzhen, China, 2016.

[542] Y. Du, S. L. Fryer, D. Mathalon, and V. D. Calhoun, "Identify biomarkers from dynamic network

to predict clinical high-risk patients for developing disorders prior to early onset schizophrenia,"


[543] Y. Du, S. L. Fryer, D. Mathalon, and V. D. Calhoun, "Clinical high-risk subjects show

intermediate pattern between healthy controls and early on-set schizophrenia," in Human Brain


[544] F. Espinoza, R. Miller, E. Mennigen, V. Vergara, J. Turner, M. Misiura, J. Ciarochi, H. Johnson,

J. D. Long, H. J. Bockholt, J. Paulsen, P.-H. Investigators, and V. D. Calhoun, "Resting-state

dynamic functional network connectivity differences between prodromal Huntington’s disease

and healthy control subjects," in Society for Neuroscience, San Diego, CA, 2016.

[545] J. Ferri, J. M. Ford, B. J. Roach, J. Turner, T. Van Erp, J. Voyvodic, A. Preda, A. Belger, J.

Bustillo, D. O'Leary, B. Mueller, K. Lim, S. McEwen, V. D. Calhoun, M. Diaz, G. Glover, D.

Greve, C. Wible, C. J. Vaidya, S. Potkin, and D. Mathalon, "Thalamo-Cortical Dysconnectivity in

Schizophrenia," in Society of Biological Psychiatry, Atlanta, GA, 2016.

[546] S. L. Fryer, S. W. Woods, J. Ford, B. J. Roach, V. D. Calhoun, G. Pearlson, K. A. Kiehl, V. H.

Srihari, T. McGlashan, and D. Mathalon, "Should I Stay or Should I Go?: FMRI Response during

Inhibitory Control in Clinical High Risk and Early Illness Schizophrenia," in Society of

Biological Psychiatry, Atlanta, GA, 2016.

[547] S. Gopal, J. Nomi, D. R. Dajani, R. Steimke, E. Damaraju, S. Rachakonda, S. Baum, L. Q. Uddin,

and V. D. Calhoun, "Inter-subject variability in dynamic functional connectivity states tracks with

occupancy of states," in Human Brain Mapping, Geneva, Switzerland, 2016.

[548] K. Gorgolewski, T. Auer, V. D. Calhoun, C. Craddock, S. DAs, E. Duff, G. Flandin, S. Ghosh, T.

Glatard, Y. O. Halchenko, D. A. Handwerker, M. Hanke, D. Keator, X. Li, Z. Michael, C.

Maumet, B. N. Nichols, T. Nichols, J. B. Poline, A. Rokem, G. Shaefer, V. Sochat, J. Turner, G.

Varoquaux, and R. A. Poldrack, "The Brain Imaging Data Structure: a standard for organizing

83


and describing outputs of neuroimaging experiments," in Human Brain Mapping, Geneva,

Switzerland, 2016.

[549] C. N. Gupta, E. Castro, S. Rachakonda, T. Van Erp, S. Potkin, J. Ford, D. Mathalon, S. McEwen,

H. J. Lee, B. Mueller, D. Greve, O. Andreassen, I. Agartz, A. Mayer, J. Stephen, R. Jung, J.

Bustillo, V. D. Calhoun, and J. Turner, "Complex Biomarker Identification From Structural

Magnetic Resonance Images in Schizophrenia Using Independent Component Analysis," in

ACNP, Hollywood, FL, 2016.

[550] S. M. Hare, J. M. Ford, A. Law, A. Ahmadi, E. Damaraju, A. Belger, J. Bustillo, H. J. Lee, D. H.

Mathalon, B. A. Mueller, A. Preda, T. van Erp, S. Potkin, V. D. Calhoun, J. A. Turner, and

FBIRN, "Hallucina(ons & the Res(ng-State Brain: A Review of Findings in the FBIRN Dataset,"

in International Consortium for Hallucinations Research, 2016.

[551] A. Heller, D. Warren, T. W. Wilson, V. D. Calhoun, J. Stephen, Y.-W. Wang, and J. Beadle,

"Brain networks related to loneliness in adolescents," in Social Neuroscience Conference, 2016.

[552] D. Hjelm, R. Salakhutdinov, K. Cho, N. Jojic, V. D. Calhoun, and J. Chung, "Iterative

Refinement of the Approximate Posterior for Directed Belief Networks " in NIPS, 2016.

[553] W. Hu, D. Lin, V. D. Calhoun, and Y.-P. Wang, "Integration of SNP-FMRI-Methylation Data

with Sparse Multi-CCA for Schizophrenia Study," in IEEE Engineering in Medicine and Biology

Conference, Orlando, FL, 2016.

[554] W. Jiang, E. Walton, J. Turner, D. Glahn, N. Van Haren, G. Spalletta, O. Andreassen, I. Agartz,

M. Machielsen, S. Potkin, T. D. Satterthwaite, R. Gur, J. Radua, S. Ehrlich, V. D. Calhoun, R.

Roiz-Santianez, B. Crespo-Facorro, R. Hashimoto, A. Voineskos, L. Wang, A. Giorgio, P.

Kochunov, G. Donohoe, S. Kelly, O. Gruber, L. Flyckt, J. S. Kwon, S. M. Lawrie, E. Neilson, F.

Howells, F. Spaniel, P. M. Thompson, E. S. W. Group, and T. Van Erp, "Surface Area Deficits in

Schizophrenia: An ENIGMA Schizophrenia Working Group Meta-analysis," in Society of

Biological Psychiatry, Atlanta, GA, 2016.

[555] R. Kalyanam and V. D. Calhoun, "An approach for analysis of multi-subject MRSI data using

group independent component analysis," in IEEE EMBS, Orlando, FL, 2016.

[556] S. Kelley, N. Jahanshad, D. Hibar, I. Agartz, C. Allozo, O. Andreassen, C. Arango, S. Bouix, C.

Bousman, R. Brouwer, J. Burggermann, V. D. CAlhoun, D. Cannon, V. CArr, G. Castrillon, S.

Catts, C. Chiapponi, B. Crespo-Facorro, V. Cropley, P. De Rossi, E. Dickie, N. Doan, S. Ehrlich,

H. Fatouros-Bergman, L. Flyckt, J. Fouche, M. Fukunaga, D. Glahn, R. Gollub, R. Gur, R.

Hashimoto, S. Hatton, F. Henskens, I. B. Hickie, L. Hong, J. Horacek, F. Howells, H. E. Hulshoff

Pol, L. Seidman, A. Jablensky, P. Jansen, J. Janssen, E. Jonsson, Z. Kikinis, L. Kirra, P. Klauser,

C. Knochel, P. Kochunov, M. Kubicki, J. S. Kwon, J. Lagopoulos, C. Langen, S. Lawrie, R.

Lenroot, C. Lopezjaramillo, A. Lyall, V. Magnotta, R. Mandl, R. McCarley, S. McCarthy-Jones,

C. McDonald, T. Melicher, R. Mesholam-Gately, P. Michie, B. J. Mowry, D. Newell, V. Oertel-

Knochel, L. Oestreich, C. Pantelis, O. Pasternak, G. Pearlson, A. Pereira, F. Piras, P. Rasser, D.

Roalf, R. Roiz, D. Rotenberg, T. D. Satterthwaite, P. Savadjiev, U. Schall, R. Schott, M. Seal, C.

Shannon-Wickert, M. Shenton, G. Spalletta, F. Spaniel, M. Stablein, D. Stein, S. Sundrum, D.

Tordesillas, A. Vanegas, C. VArgas, D. Velakoulis, A. Voineskos, T. Weickert, L. T. Westlye, T.

White, T. J. Whitford, J. Wojcik, H. Yamamori, J. Yun, A. Zalesky, J. Zhao, T. Van Erp, J.

Turner, P. Thompson and G. Donohoe, "ENIGMA-Schizophrenia DTI: Meta-analysis of FA

differences in 1,398 cases and 1,633 healthy controls," in Human Brain Mapping, Geneva,

Switzerland, 2016.

[557] L. Kuang, Q. Lin, X. Gong, F. Cong, and V. D. Calhoun, "An adaptive fixed-point IVA algorithm

applied to multi-subject complex-valued fMRI data," in ICASSP, Shanghai, China, 2016.

[558] D. Lin, J. Liu, J. Chen, J. Sui, Y. Du, and V. D. Calhoun, "Exploration of genetic and epigenetic

effects on brain gray matter density in schizophrenia," in 12th International Imaging Genetics


84


[559] K. K. Lottman, D. L. White, N. V. Kraguljac, V. D. Calhoun, and A. C. Lahti, "Effects of

Antipsychotic Medication in Patients with Schizophrenia using Dynamic Functional Network

Connectivity Analysis," in Society of Biological Psychiatry, Atlanta, GA, 2016.

[560] S. Meda, W. Zheng, E. I. Ivleva, M. Keshavan, C. Tamminga, J. Sweeney, B. A. Clementz, V. D.

Calhoun, and G. D. Pearlson, "Deciphering Resting State Brain Function and Genetics in

Psychosis," in Society of Biological Psychiatry, Atlanta, GA, 2016.

[561] E. Mennigen, D. Mathalon, B. Rashid, E. Damaraju, Y. Du, S. L. Fryer, R. Loewy, and V. D.

Calhoun, "Dynamic functional connectivity in individuals at clinical high risk for psychosis, early

illness schizophrenia patients, and healthy controls," in Society for Neuroscience, San Diego, CA,

2016.

[562] R. Miller and V. D. Calhoun, "High-Level Fusion for Multimodal Brain Imaging Data Using

Conditional Probabilities and Directed Information Flow Between Clustered Feature Spaces," in

SIAM Conference on Imaging Science, Albuquerque, NM, 2016.

[563] R. Miller, V. Vergara, and V. D. Calhoun, "Directional Dynamic Analysis Reveals Distorted

Functional Information Flows in Schizophrenia," in Human Brain Mapping, Geneva,

Switzerland, 2016.

[564] M. Misiura, V. D. Calhoun, J. Turner, and J. Paulsen, "Functional network connectivity in motor

timing circuits in prodromal Huntington’s disease," in Human Brain Mapping, Geneva,

Switzerland, 2016.

[565] M. Misiura, J. Turner, H. Johnson, J. Paulsen, H. J. Bockholt, J. Long, S. Lourens, P.-H.

Investigators, and V. Calhoun, "Apathy in Prodromal Huntington’SsDisease and its Relation to

Basal Ganglia Volumes," in Society of Biological Psychiatry, Atlanta, GA, 2016.

[566] J. Nomi, S. Gopal, D. R. Dajani, R. Steimke, E. Damaraju, S. Rachakonda, V. D. Calhoun, and L.

Q. Uddin, "Intrinsic Functional Brain Dynamics Underlying Executive Function," in Human

Brain Mapping, Geneva, Switzerland, 2016.

[567] S. Plis and V. D. Calhoun, "COINSTAC: A privacy enabled model for leveraging and processing

decentralized brain imaging data," in Human Brain Mapping, Geneva, Switzerland, 2016.

[568] S. Qi, J. Sui, T. Van Erp, E. Damaraju, J. Bustillo, J. Chen, Y. Du, Q. Yu, J. Turner, D. Mathalon,

J. Ford, J. Voyvodic, B. Mueller, A. Belger, S. McEwen, S. Potkin, FBIRN, T. Jiang, and V. D.

Calhoun, "Searching Joint Neuromarkers in Schizophrenia by Supervised Multimodal Fusion," in

Human Brain Mapping, Geneva, Switzerland, 2016.

[569] S. Qi, V. D. Calhoun, T. van Erp, E. Damaraju, J. Bustillo, J. Turner, Y. Du, D. Mathalon, J.

Ford, J. Voyvodic, B. Mueller, A. Belger, S. McEwen, S. Potkin, A. Preda, F. BIRN, T. Jiang,

and J. Sui, "Supervised Multimodal Fusion and Its Application in Searching Joint Neuromarkers

of Working Memory Deficits in Schizophrenia," in IEEE Engineering in Medicine and Biology

Conference, Orlando, FL, 2016.

[570] B. Rashid, J. Chen, I. Rashid, J. Liu, E. Damaraju, R. Miller, and V. D. Calhoun, "Exploring The

Genetics Of The Dynamic Functional Network Connectivity In Schizophrenia," in 12th

International Imaging Genetics Conference, Irvine, CA, 2016.

[571] B. Rashid, J. Chen, I. Rashid, J. Liu, E. Damaraju, R. Miller, and V. D. Calhoun, "Association

between genetics and dynamic functional network connectivity features in schizophrenia," in


[572] B. Rashid, L. Blanken, R. Muetzel, R. Miller, E. Damaraju, M. Arbabshirani, E. Erhardt, F.

Verhulst, A. Van der Lugt, V. Jaddoe, H. Tiemeier, T. White, and V. D. Calhoun, "A Pediatric

Population-Based Resting State Study of Connectivity Dynamics in Typical Development " in


[573] O. Richfield, M. A. Alam, V. D. Calhoun, and Y. P. Wang, "Learning Schizophrenia Imaging

Genetics Data Via Multiple Kernel Canonical Correlation Analysis," in IEEE International

Conference on Bioinformatics and Biomedicine Shenzhen, China, 2016.

85


[574] R. Steimke, J. Nomi, V. D. Calhoun, C. Stelzel, L. Paschke, H. Walter, and L. Q. Uddin,

"Salience network dynamics underlying successful resistance of temptation," in Human Brain


[575] J. Sui, E. Osuch, N. Jie, and V. Calhoun, "Discriminating First-Episode Bipolar Disorder From

Unipolar Depression by Feature selection from Whole-Brain Functional Connectivity," in Society

of Biological Psychiatry, Atlanta, GA, 2016.

[576] J. Sui, R. Jiang, C. Abbott, D. Lin, T. Jiang, and V. D. Calhoun, "Predicting individual response

to electroconvulsive therapy in major depression by MRI," in Human Brain Mapping, Geneva,

Switzerland, 2016.

[577] J. Turner, J. Liu, V. Patel, W. Jiang, C. N. Gupta, and V. D. Calhoun, "Is There Still a Role for

Common Genetic Variants in Gray Matter Effects in Schizophrenia?," in Society of Biological

Psychiatry, Atlanta, GA, 2016.

[578] T. Van Erp, D. Hibar, E. Walton, V. Calhoun, W. Jing, L. Schmaal, P. Thompson, J. Turner, and

ENIGMA, "Searching Joint Neuromarkers in Schizophrenia by Supervised Multimodal Fusion,"


[579] V. Vergara, R. Miller, T. Van Erp, E. Damaraju, J. Bustillo, J. Turner, D. Mathalon, J. Ford, J.

Voyvodic, B. Mueller, A. Belger, S. McEwen, J. B. Potash, FBIRN, and V. D. Calhoun, "The

Functional Dynamics of Brain Domains in Schizophrenia," in Human Brain Mapping, Geneva,

Switzerland, 2016.

[580] V. Vergara and V. D. Calhoun, "Randomness in Resting State Functional Connectivity Matrices,"

in IEEE Engineering in Medicine and Biology Conference, Orlando, FL, 2016.

[581] L. Wang, K. Alpert, V. Calhoun, D. Keator, M. King, A. Kogan, D. Landis, S. Potkin, J. Turner,

and J. L. Ambite, "SchizConnect: Flexible, Dynamic Platform for Mediating Multiple

Schizophrenia Neuroimaging Databases," in Human Brain Mapping, Geneva, Switzerland, 2016.

[582] R. E. Warnick, M. Guindani, E. Erhardt, E. Allen, V. Calhoun, and M. Vannucci, "A Bayesian

approach for estimating dynamic functional connectivity networks in fMRI data," in 9th

International Conference of the ERCIM WG on Computational and Methodological Statistics,

Seville, Spain, 2016.

[583] D. E. Warren, A. Rangel, J. M. Stephen, V. D. Calhoun, Y.-P. Wang, and T. W. Wilson, "The

influence of adolescent hippocampal volume and functional connectivity on memory

performance: A cross-sectional investigation from the Dev-CoG project " in Society for


[584] C. E. Wilcox, V. D. Calhoun, E. Claus, R. Littlewood, S. Rachakonda, J. Mickey, and P.

Arenella, "Default mode network deactivation to smoking cue predicts treatment outcome in

nicotine use disorder," in Human Brain Mapping, Geneva, Switzerland, 2016.

[585] C. Wright, N. C. Gupta, J. Chen, V. Patel, V. D. Calhoun, S. Ehrlich, L. Weng, J. Bustillo, N.

Perrone-Bizzozero, and J. Turner, "MicroRNA 137 and its Regulated Genes are Associated with

Brain Imaging Measures in Schizophrenia," in Society of Biological Psychiatry, Atlanta, GA,

2016.

[586] L. Wu, A. Caprihan, and V. D. Calhoun, "Functional connectivity dual parcellations by cmICA: a

novel approach to efficiently capture connectivity shows significant relationship of multiple

networks to symptom and cognitive scores in schizophrenia," in Human Brain Mapping, Geneva,

Switzerland, 2016.

[587] M. Yaesoubi, R. Miller, T. Adalı, and V. D. Calhoun, "Time-varying frequency modes of resting

fMRI brain networks reveal significant gender differences," in ICASSP, Shanghai, China, 2016.

[588] M. Yaesoubi, R. Miller, and V. D. Calhoun, "A new framework to capture dynamics of frequency

content of brain network time-courses," in Human Brain Mapping, Geneva, Switzerland, 2016.

[589] Q. Yu, Y. Du, H. He, J. Sui, G. Pearlson, and V. D. Calhoun, "Estimating dynamic connectivity

transition rules in healthy controls and schizophrenia patients," in Human Brain Mapping,


86


[590] S. Bhinge, Q. Long, Y. Levin-Schwartz, Z. Boukouvalas, V. D. Calhoun, and T. Adalı, "Non-

orthogonal constrained independent vector analysis: application to data fusion," in ICASSP, New

Orleans, LA, 2017.

[591] V. Calhoun, F. Amin, D. Hjelm, E. Damaraju, and S. Plis, "A deep-learning approach to translate

between brain structure and functional connectivity," in ICASSP, New Orleans, LA, 2017.

[592] J. Chen, V. D. Calhoun, L. Wu, A. Caprihan, N. Perrone-Bizzozero, J. Bustillo, J. A. Turner, S.

Potkin, T. Van Erp, and J. Liu, "Polygenic Risk Score for Schizophrenia of CREB1 and BDNF

Associated with Structural Brain Dysconnectivity," in Society of Biological Psychiatry, San

Diego, CA, 2017.

[593] D. Hjelm, S. Plis, and V. D. Calhoun, "Recurrent Neural Networks for Spatiotemporal Dynamics

of Intrinsic Networks from fMRI Data," in NIPS, Barcelona, Spain, 2017.

[594] S.-J. Kim, V. D. Calhoun, and T. Adalı, "Flexible large-scale fMRI analysis: a survey," in

ICASSP, New Orleans, LA, 2017.

[595] L. Kuang, Q. Lin, X. Gong, F. Cong, and V. D. Calhoun, "Post-ICA phase denoising for resting

state complex-valued fMRI data," in ICASSP, New Orleans, LA, 2017.

[596] L. Kuang, Q. Lin, X. Gong, Y. Chen, F. Cong, and V. D. Calhoun, "Model order effects on

independent vector analysis applied to complex-valued fMRI data," in IEEE International

Symposium on Biomedical Imaging Melbourne, Australia, 2017.

[597] Y. Levin-Schwartz, V. D. Calhoun, and T. Adalı, "Two models for fusion of medical imaging

data: comparison and connections," in ICASSP, New Orleans, LA, 2017.

[598] D. Lin, Q. Yu, E. Damaraju, and V. D. Calhoun, "MeQTL driven analysis of epigenetic effects on

functional brain connectivity in schizophrenia," in International Imaging Genetics Conference,

Irvine, CA, 2017.

[599] Q. Long, S. Bhinge, Y. Levin-Schwartz, V. D. Calhoun, and T. Adalı, "A Graph Theoretical

Approach for Performance Comparison of ICA for fMRI Analysis," in Conference on

Information Systems and Sciences, Baltimore, MD, 2017.

[600] R. Miller and V. Calhoun, "Statistical Stationarity, Temporal Epochs and fMRI Network

Dynamics," in Keystone Symposia Conference on Connectomics, Santa Fe, NM, 2017.

[601] L. Rabany, S. Brocke, V. D. Calhoun, C. J. Hyatt, S. Corbera, B. E. Wexler, M. D. Bell, K. A.

Pelphrey, and M. Assaf, "Default Mode Network Functional Connectivity Similarities in

Schizophrenia and Autism Spectrum Disorder," in Society of Biological Psychiatry, San Diego,

CA, 2017.

[602] B. Rashid, J. Chen, I. Rashid, J. Liu, E. Damaraju, R. Miller, T. Van Erp, J. Bustillo, J. Turner, D.

Mathalon, S. Potkin, A. Preda, and V. D. Calhoun, "Association Between Genetics and Dynamic

Functional Network Connectivity Features In Schizophrenia," in International Imaging Genetics


[603] M. Salman, Y. Du, and V. D. Calhoun, "Identifying fMRI dynamic connectivity states using

affinity propagation clustering method: application to schizophrenia," in ICASSP, New Orleans,

LA, 2017.

[604] M. Salman, Y. Du, E. Damaraju, and V. D. Calhoun, "Group information guided ica shows more

sensitivity to group differences than dual-regression," in IEEE International Symposium on

Biomedical Imaging Melbourne, Australia, 2017.

[605] V. Vergara and V. Calhoun, "Randomness Measures of Dynamic Functional Connectivity

States," in Keystone Symposia Conference on Connectomics, Santa Fe, NM, 2017.

[606] M. Wang, T.-Z. Huang, V. D. Calhoun, and Y.-P. Wang, "Integration of multiple genomic

imaging data for the study of schizophrenia using joint nonnegative matrix factorization," in

ICASSP, New Orleans, LA, 2017.

[607] N. Wojtalewicz, R. F. Silve, V. D. Calhoun, and S. Plis, "Decentralized independent vector

analysis," in ICASSP, New Orleans, LA, 2017.

[608] P. Zille, V. D. Calhoun, J. Stephen, T. W. Wilson, and Y.-P. Wang, "Fused estimation of sparse

connectivity patterns from rest fMRI," in ICASSP, New Orleans, LA, 2017.

87


Book Chapters/Reviews:

[1] V. D. Calhoun and B. Hong, "Independent component analysis of functional magnetic resonance

imaging data," in Handbook of Pattern Recognition and Computer Vision. vol. 3rd, C. H. Chen,

Ed.: World Scientific Publishing, 2005.

[2] M. Assaf, P. Rivkin, M. Kraut, V. D. Calhoun, J. Hart, G. D. Pearlson, J. Hart, and M. Kraut,

"Schizophrenia and Semantic Memory," in The Neural Basis of Semantic Memory: Cambridge

University Press, 2006.

[3] V. D. Calhoun, M. Rizzo, and R. Parasuraman, "Investigation of Brain Networks Involved in

Simulated Driving Using Functional Magnetic Resonance Imaging," in NeuroErgonomics: The

Brain at Work: Oxford University Press, 2006.

[4] V. D. Calhoun, G. D. Pearlson, F. Hillary, and J. DeLuca, "Alcohol Intoxication Effects on fMRI

Activation," in Functional Neuroimaging in Clinical Populations: Guilford Press, 2007.

[5] V. D. Calhoun and T. Adalı, "ICA for Fusion of Brain Imaging Data," in Signal Processing

Techniques for Knowledge Extraction and Information Fusion, D. Mandic, M. Golz, A. Kuh, D.

Obradovic, and T. Tanaka, Eds.: Springer, 2008.

[6] V. D. Calhoun and T. Eichele, "Fusion of fMRI and EEG by Parallel Group ICA," in

Simultaneous EEG and fMRI: Recording, Analysis, and Application, 2008.

[7] D. Lloyd, V. D. Calhoun, R. Astur, and G. D. Pearlson, "Functional brain imaging and the

problem of other minds," in Theory of Mind in Literature and Cognitive Science, 2008.

[8] N. Swanson, T. Eichele, G. D. Pearlson, and V. D. Calhoun, "Lateral Differences in the Default

Mode Network in Schizophrenia," in The two halves of the brain: Information processing in the

cerebral hemispheres: MIT Press, 2009.

[9] D. Bridwell and V. D. Calhoun, "Fusing concurrent EEG and fMRI," in MEG-From Signals to

Dynamic Cortical Networks: Springer Verlag, 2013.

[10] T. Liu, G. Glover, B. Mueller, D. Greve, J. Rasmussen, J. Voyvodic, J. A. Turner, T. Van Erp, D.

Mathalon, K. W. Jorgensen, K. Lu, G. Brown, D. Keator, V. D. Calhoun, H. J. Lee, J. Ford, M.

Diaz, D. O'Leary, S. Gadde, A. Preda, K. O. Lim, C. Wible, H. S. Stern, A. Belger, G. McCarthy,

B. Ozyurt, S. Potkin, and FBIRN, "Quality Assurance in Functional MRI," in fMRI: Theory and

Applications: Springer, 2014.

[11] J. L. Ambite, M. Tallis, K. Alpert, D. Keator, M. King, D. Landis, F. Konstantinidis, V. D.

Calhoun, S. Potkin, J. A. Turner, and L. Wang, "Terminology Development Towards

Harmonizing Multiple Clinical Neuroimaging Research Repositories," in Data Integration in the

Life Sciences, N. Ashish and J. L. Ambite, Eds., 2015.

[12] Z. Chen and V. D. Calhoun, "Inverse MRI for Tomographic Magnetic Susceptibility

Reconstruction," in Computed Tomography: SMG Group, 2016.

[13] J. Sui and V. Calhoun, "Multivariate approaches for multimodal fusion of structural and

functional brain imaging data," in fMRI Techniques and Protocols, Second Edition, M. Filippi,

Ed.: Springer, 2016.

Educational Activities: Teaching/Lecturing (not comprehensive):

At UNM:

ECE Seminar 4/2006

“Data Driven Brain Image Analysis: Algorithms & Applications”

ECE Seminar 6/2006

“Data Driven Brain Image Analysis: Algorithms & Applications: Part II”

88


2-day ICA and GIFT Software Workshop 4/2006

The Mind Research Network

Organized 4-part mini-series on biomedical imaging Fall 2006

ECE Seminar

Neuroscience Seminar 9/2007

“Fusion of multi-task and multi-modal brain imaging data: An integrated approach and

several examples”

ECE 595: Analysis Methods in fMRI (18 students) Spring 2007

[ICES overall avg 5.5]

ECE 510: Medical Imaging (33 students) Fall 2007

[WebCT Avg 4.75/5.0, IDEA 4.9/5.0 raw; 4.6/5.0 adj]

CS/591C 004, Stat/579D 004, Math/579D 004, Anthro 560, Bio 503 004 Fall 2007

Topics in Interdisciplinary Biology and Biological Sciences:

Functional Imaging of the Brain

ECE 340: Probabilistic Methods in Engineering (45 students) Spring 2008

[ICES overall avg 3.14, 40-50% rated 4 or higher]

3-day fMRI Acquisition and Analysis Course 2/2008

40 attendees

Lecturing for Undergraduate survey in Bioengineering Spring 2008


30 attendees

ECE 510: Medical Imaging (12 students) Fall 2008


30 attendees



30 attendees


30 attendees

ECE 510 (core course): Medical Imaging (20 students) Fall 2009

89













Outside UNM:

Instructor, Course on MEASURE, volumetric analysis of structural MRI 10/1995

Johns Hopkins Division of Psychiatric Neuro-Imaging

Development of Software Manuals, Training Material, and Course Syllabi

Instructor, Course on MEASURE, volumetric analysis of structural MRI 8/1996


Organizer of Functional Imaging Journal Club 1996-2002


FM Kirby Center for Functional Brain Imaging

Lecturer at Graduate Seminar, University of Maryland, Baltimore County 4/1998

“Motion Correction in functional MRI (fMRI)”

Lecturer at Psychiatry Research Potpourri, Johns Hopkins University 5/1998

“Movies of the brain: Simultaneous display of spatial and temporal functional MRI data”

Lecturer at Psychiatry Research Seminar, Johns Hopkins University 11/1998

“Visual Evoked Responses in fMRI”

90


Guest Instructor: Computer Visualization 11/1998

University of Maryland, Baltimore County

Statistics Grand Rounds Presentation at Johns Hopkins Public Health School 5/1999

“Methods for Exploring Temporal Dynamics of fMRI of the Visual System”

Speaker at Opening Symposium for FM Kirby Center for Functional Brain Imaging 5/1999

“Temporal Dynamics of Functional MRI in the Visual System”

Organizer and Instructor: Course on fMRI Analysis Methods 9/1999


Presenter at Psychiatry Research Potpourri, Johns Hopkins University 5/2000

“Brain Networks activated during a Motor-Free Visual Perception Task: An fMRI Analysis

of Functional Connectivity”

Presenter at Graduate Seminar, University of Maryland, Baltimore County 5/2000

“A Weighted-Least Squares Method for Estimating Latencies in functional MRI”

Invited Panelist and Speaker, NINDS Workshop 11/2000

"Opportunities in Cognitive Neuroscience Research: Neuroimaging and Beyond"

Presenter at Graduate Seminar, University of Maryland, Baltimore County 4/2001

“An ICA Model for Application to fMRI: Application to a Simulated Driving Paradigm”

Presenter at Psychiatry Research Seminar, Johns Hopkins University 5/2001

“An Introduction to fMRI and its Use in the Study of Complex Behaviors”

Organizer and Instructor: Course on SPM Analysis of PET and fMRI Data 8/2001


Guest Instructor: Neural Networks 10/2001

University of Maryland, Baltimore County

Presenter at Psychiatry Research Seminar, Johns Hopkins University 11/2001

“Simulated Driving and the Effects of Marinol: An fMRI Study”

Organizer and Instructor: Course on SPM Analysis of PET and fMRI Data 1/2002


Invited Course: Statistical Parametric Mapping analysis of fMRI Data 2/2002

National Institute of Health Gerontology Research Center

Chairman’s Grand Rounds Presentation at Wayne State University 3/2002

“Simulated Driving: Quantification, Validation and fMRI Studies of Driving While

Intoxicated”

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Co-chair and organizer, workshop on “Novel Methods for processing fMRI Data” 5/2002

Annual meeting of the Society of Biological Psychiatry

Invited Speaker, Human Brain Mapping 6/2002

“An Infomax Method for Performing ICA of fMRI Data in the Complex Domain”

Presenter at Neuropsychopharmacology Grand Rounds, Institute of Living 10/2002

“Intoxication Effects on Simulated Driving”

Invited co-organizer, workshop on “Independent Component Analysis of fMRI Data” 5/2003

Annual meeting on Independent Component Analysis (ICA 2003)

Guest Instructor: Biomedical Engineering Seminar (BENG480a) 10/2003

Yale University School of Biomedical Engineering

Lecturer at fMRI Seminar Series: 10/2003

“Independent Component Analysis for fMRI”

Yale University School of Medicine

Guest Instructor: Neuroscience Seminar 10/2003

Trinity College School of Engineering

Lecturer at Bioimaging Seminar Series: 11/2003

“Complex-valued fMRI data analysis”


Lecturer for Statistics Series: 11/2003

“The use of higher order statistics for the analysis of functional brain imaging data”


Invited Panelist and Speaker, workshop on virtual reality 12/2003

Society of Biological Psychiatry

Lecturer: Neuroimaging in Neuropsychiatry 4/2004


Invited Speaker, University of Toronto 7/2004

“Independent Component Analysis of fMRI: What?, When?, and How?”

Training and initial release of GIFT Software 7/2004

Software available at: http://icatb.sourceforge.net

Lecturer: Neuroimaging in Neuropsychiatry 11/2004


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Psychiatry Grand Rounds: 11/2004

“Update on the Olin Center: Medical Image Analysis Lab”


Instructor: Independent Component Analysis for fMRI 11/2004

Olin Neuropsychiatry Research Center

Attended by 20 individuals from multiple labs

Lecturer at fMRI Seminar Series: 12/2004

“Fusion of multi-task and multi-modal imaging data: joint-ICA modeling approaches”


Organizer/Lecturer: Neuroimaging in Neuropsychiatry I: Methods 7/2005-12/2005

This is a course on neuroimaging methods and techniques targeted at residents, clinical

interns, and neuroscience graduate students

Guest Instructor: Neuroscience Seminar 11/2005

Trinity College School of Engineering

Invited Speaker, BIRN All Hands Meeting 11/2005

“Applications of Independent Component Analysis to fMRI”

Organizer and Lecturer, 3-day course on fMRI Data Acquisition and Analysis 6/2005 Olin Neuropsychiatry Research Center, Hartford, CT 30 attendees from around the world Organizer, workshop on “Mining the Complexity of Functional MRI Data” 5/2005 Organization for Human Brain Mapping Organizer and Lecturer, 3-day course on fMRI Data Acquisition and Analysis 11/2005 Olin Neuropsychiatry Research Center, Hartford, CT 50 attendees from around the world

Organizer/Lecturer: Neuroimaging in Neuropsychiatry II: Applications 1/2006-5/2006

This is a course on neuroimaging applications targeted at residents, clinical interns, and

neuroscience graduate students Organizer and Lecturer, 3-day course on fMRI Data Acquisition and Analysis 3/2006 Olin Neuropsychiatry Research Center, Hartford, CT 50 attendees from around the world Organizer and Lecturer: Workshop on GIFT Software 4/2006 MIND Institute, University of New Mexico, Albuquerque, New Mexico 15 attendees

Instructor: International Society for Magnetic Resonance in Medicine 5/2006

“Multi-Modal fMRI: Physiology, Acquisition, and Analysis”

Instructor: Mining Brain Dynamics 9/2006

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A Tutorial Workshop on Independent Component Analysis in Neuroimaging

Bergen, Norway

ICA and GIFT Software Workshop 3/2007

MGH and MIT

40 attendees

Instructor: International Society for Magnetic Resonance in Medicine 6/2007

“Multi-Modal fMRI: Physiology, Acquisition, and Analysis”

Instructor: Course on Mining Brain Dynamics 8/2009

Bergen, Norway

Plenary Lecture: Default Mode Network Workshop 6/2010

Barcelona, Spain

Morning Workshop at Human Brain Mapping Conference 6/2011

From basepairs to epigenetics: Multivariate methods for identifying genetic effects on brain

imaging measures

Ontario, CA


Comparison of multi-subject ICA methods for analysis of fMRI data: Consistency and

Variability of Intrinsic Networks in the Healthy and Diseased Brain

Ontario, CA


On the Use of Brain Network Measures to Characterize Major Mental Disorders

Seattle, WA


Approaches for Classification & Prediction of Disease Using Independent Component

Analysis

Hamburg, Germany


Multivariate methods for characterizing variability in spatial and temporal connectivity

among intrinsic brain networks

Hamburg, Germany

Educational Activities: Training/Mentoring (not comprehensive)

Faculty

Dr. Alireza Atri, M.D., Ph.D., Harvard

Mentor for NIH K32: Modeling cholinergic modulation of fMRI memory networks

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Dr. Judy Ford: Professor, Yale University

Mentor for NIH K02: FMRI Analysis

Dr. Michael Stevens, Assistant Professor, Yale University

Mentor for NIH K02 award: FMRI Analysis

Dr. Julie Staley: Assistant Professor, Yale University

Training in SPM and Voxel-based Morphometry

Dr. Robert Schultz: Associate Professor, Yale University

Training in Voxel-based Morphometry, Pulse Sequence Setup for 3T Siemens Trio

Dr. Wil Cunningham: Assistant Professor, University of Toronto

Training in Group ICA of fMRI

Dr. David Schretlen, Associate Professor, Johns Hopkins University

Training in SPM and Voxel-based Morphometry

Dr. Reisa Sperling, Assistant Professor, Harvard University

Training on Independent Component Analysis of FMRI data and the GIFT software

Dr. Chris Abbott, Assistant Professor, University of New Mexico

Training on Independent Component Analysis of FMRI data and the GIFT software

Mentor on K Award

Mentor for COBRE project

Dr. Robert Thoma, Associate Professor, University of New Mexico

Mentor for COBRE project

Post Doctoral Fellows (selected from over 50)

Dr. Jean Liu: Postdoctoral Fellow in the Medical Image Analysis Lab, on fusion of

functional MRI, genetics, and EEG data

Dr. Madiha Jafri: Postdoctoral Fellow in the Medical Image Analysis Lab, on multivariate

functional connectivity in schizophrenia

Dr. Baoming Hong: Postdoctoral Fellow in the Medical Image Analysis Lab, on the signal

properties of fMRI, ICA, and the development of realistic constraints for ICA analysis.

Dr. Jinsuh Kim: Postdoctoral Fellow in the Medical Image Analysis Lab.

Dr. Mona Noureldin: JHU Radiology fellow, on using SPM to analyze fMRI to study

normal motor paradigms and Parkinson disease.

Dr. Nina Mikhelashvili: JHU Radiology fellow, on using SPM to analyze fMRI to study

normal motor paradigms and Parkinson disease.

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Dr. Kader Karli Oguz: JHU Radiology, on using SPM to analyze fMRI of normal motor

paradigms.

Graduate Students Advised (selected from over 50)

Li Yiou (PhD, Graduated 2006)

Technical Lead at Hewlett Packard Enterprise

David Schneider: (MS, Graduated 2006)

Postdoctoral Fellow at Duke University

Karyn Backus (MS, Graduated 2006)

Xiaoyang Cheng (ECE PhD, Graduated 2006)

Delphinus Medical Technologies

Zhao Juan (PhD, Graduated 2007)

Matt Sutherland (Psychology PhD, Graduated 2007)

Postdoctoral Fellow at The National Institute on Drug Abuse (NIDA)

Matthias Moosmann (PhD, Graduated 2007)

University of Bergen

Tom Eichele (PhD, Graduated 2007)

Physician/Researcher, University of Bergen

Madiha Jafri (PhD, Graduated 2008)

Cybersecurity Systems Engineering Manager at Lockheed Martin

Alex Franco (ECE PhD, Graduated 2009)

Associate Professor, PUCRS

Lai Xu (ECE PhD, Graduated 2009)

Senior Staff System Engineer at Adeptence

Andrew Michaels (ECE PhD, graduated 2009)

Director Neuroimage Analytics at Geisinger Health System

Nicole Correa (PhD, Graduated 2010)

Technical Program Manager, Machine Learning at Amazon.com

Sunil Arja (MS, Graduated 2011)

Senior Analytical Software Engineer, AT&T

Martin Havlicek (PhD, graduated 2011)

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Postdoctoral Fellow, Maastricht University, Dept of Cognitive Neuroscience

Michelle Juarez (ECE MS, graduated 2011)

Systems Engineer at Raytheon

Siddarth Khullar (ECE PhD, graduated 2012)

Researcher / Product Innovator, Apple

Vamsi Potluru (CS PhD, Graduated 2014)

Senior Researcher, Comcast Cable

Eduardo Castro (ECE PhD, Graduated 2013)

IBM Research

Jiayu Chen (ECE PhD, Graduated 2013)

Postdoctoral Fellow, The Mind Research Network

Sai Ma (ECE PhD, Graduated 2013)

Data Analyst and PowerSchool Support, Mystic Valley Regional Charter School

Wei Du (ECE PhD, Graduated 2013)

Division of Computational Bioscience, Center for Information Technology, NIH

Matthew Anderson (ECE PhD, Graduated 2013)

Systems Engineer at BAE Systems

Pedro Rodriguez (ECE PhD, Graduated 2013)

The John Hopkins University Applied Physics Lab

Mohammad Arbabshirani (ECE PhD, Graduated 2014)

Machine learning and Computational Scientist at Geisinger Health System

Carrie Wright (Biomedical Sciences PhD, Graduated 2014)

Postdoctoral Research Fellow at Lieber Institute for Brain Development

Mustafa Cetin (CS PhD, Graduated 2015)

Data Scientist at Intel Corporation

Shruti Gopal (ECE PhD, graduated 2016)

Postdoctoral Fellow, University of Miami

Eswar Damaraju (ECE PhD, post-qualifying)

Lei Wu (ECE PhD, post-qualifying)

William Gruner (ECE PhD, post-qualifying)

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Rogers Silva (ECE PhD, post-qualifying)

Lora Cope (Psychology PhD, post-qualifying)

Samantha Fede (Psychology PhD, post-qualifying)

Barnaly Rashid (ECE PhD, post-qualifying)

Maziar Yaesoubi (ECE PhD, post-qualifying)

Hao He (ECE PhD, post-qualifying)

Oktay Agcaoglu (ECE PhD, post-qualifying)

Devon Hjelm (CS PhD, post-qualifying)

Mustafa Salman (ECE PhD, pre-qualifying)

Alvaro Ulloa (ECE PhD, post-qualifying)

Undergraduate & High School Students (sample)

Daniel Hong, High School Student, learning research skills in the Psychiatric Neuro-

Imaging Lab, 1999.

Joseph Hong, High School Student, learning research skills in the Psychiatric Neuro-

Imaging Lab, 2000.

Mayur Pandya: Third Year Medical Student, Ohio University College of Osteopathic

Medicine, doing neuro-imaging research elective, 2001.

Adam Dziorny: Undergraduate Biomedical Engineering Student, Johns Hopkins University,

fMRI processing strategies and research skills, 2001-2002.

Eric Egolf: Undergraduate Computer Science Student: Trinity College, senior project:

development of functional connectivity toolbox for SPM99, 2002-2003.

Deanna McDevitt: Undergraduate Student, Yale University, Directed Reading in

Psychology on a Depression and the Christian Psychologist, Spring 2003.

Alvin Chon: Undergraduate Student, Trinity College, senior project in informatics:

multimodality database and data mining techniques applied to functional MRI, structural

MRI, diffusion tensor MRI, and EEG, Fall 2003.

Samara Reynolds: Undergraduate Student, Trinity College, 2005

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Doris Nguyen: Undergraduate Student (via the TBP mentor program), 2003-2005.

Abbie Garrity: Undergraduate Student, Trinity College, Fall/Spring 2004-2006

Guilherme Machado: Senior undergraduate student, UNM ECE, 2006

Jeffrey Lie: Senior undergraduate student, UNM ECE, 2007

Worked with me as part of the EYES program

Chris Parchert: Senior undergraduate student, UNM ECE, 2007-2008

Janet Nguyen: Senior undergraduate student, UNM ECE 2007-2008

Michelle Juarez: Senior undergraduate student, UNM ECE 2006-2007

Christina Davidson: High school senior, Albuquerque, 2007

Joel Bixler (UTexas ECE undergraduate student, 2008)

Cullen Roth (UNM applied math undergraduate student, 2013-2014)

Bradley Baker (NCF machine learning undergraduate student, 2014-2016)

Nikolas Wojtalewicz (NCF machine learning undergraduate student, 2015)

Daisy Reyes (UNM applied math undergraduate student, 2015-2016)

Dakarai McCoy (UNM ECE undergraduate student, 2015-2016)

Annotated list of Trainees (not comprehensive):

Peer-reviewed publications of trainees are listed. Trainees’ names are highlighted in bold font.

Chris Abbott, MD

Clinician, Dept. of Psychiatry, University of New Mexico

Role: Mentor on K award

Dr. Abbott is a current CTSC scholar at UNM. He has been working closely with Dr. Calhoun

for years, and as part of his training, he spent a year interacting with lab members in Dr.

Calhoun’s group and learning how to work with brain imaging data.

Publications: [1] C. Abbott, A. Caprihan, J. Yamamoto, N. I. Perrone-Bizzozero, G. Pearlson, and V. D. Calhoun, "Source

Based Morphometry Analysis of Group Differences in Fractional Anisotropy in Schizophrenia," in Proc.

HBM, Quebec City, Canada, 2011.

[2] C. Abbott, D. I. Kim, S. Sponheim, J. R. Bustillo, and V. D. Calhoun, "Decreased Default Mode Neural

Modulation with Age in Schizophrenia," American Journal of Geriatric Psychiatry, vol. 18, pp. 897-907,

2010, PMC Pending #202225.

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[3] C. Abbott, M. Juarez, T. White, R. L. Gollub, G. D. Pearlson, J. R. Bustillo, J. Lauriello, B. C. Ho, H. J.

Bockholt, V. P. Clark, V. Magnotta, and V. D. Calhoun, "Antipsychotic Dose and Diminished Neural

Modulation: A Multi-Site fMRI Study," Progress in Neuro-Psychopharmacology & Biological Psychiatry,

vol. 35, pp. 473-482, 2011, PMC Pending #255577.

[4] C. Abbott, F. Merideth, D. Ruhl, Z. Yang, V. P. Clark, V. D. Calhoun, F. M. Hanlon, and A. R. Mayer,

"Auditory orienting and inhibition of return in schizophrenia: A functional magnetic resonance imaging

study," Progress in Neuro-Psychopharmacology & Biological Psychiatry, In Press, PMC Pending

#346258.

[5] A. Caprihan, C. Abbott, J. Yamamoto, G. D. Pearlson, N. Bizzozero, J. Sui, and V. D. Calhoun, "Source-

based morphometry analysis of group differences in fractional anisotropy in schizophrenia," Brain

Connectivity, In Press, PMC Pending #304239.

[6] J. Turner, H. Chen, D. Mathalon, E. Allen, A. Mayer, C. Abbott, V. D. Calhoun, and J. Bustillo,

"Reliability of the amplitude of low-frequency fluctuations in resting state in chronic schizophrenia,"

Psych.Res.Neuroimaging, In Press, PMC Pending #326593.

Lai Xu

PhD Student, University of New Mexico, Dept. of ECE, post-proposal

Role: Advisor for PhD

Ms. Xu is a current PhD student, post proposal, expected to defend her thesis in May 2010. She

won a fellowship funded by Howard Hughes as part of the Program in Interdisciplinary Biology

and Biological Sciences (PIBBS) program at UNM. She also had multiple posters presented at

conferences and has two published journal articles and another submitted.

Publications: [1] L. Xu, J. Liu, and V. D. Calhoun, "Functional Connectivity among Spatially Independent Brain Regions

During a VR Task," in Proc. HBM, Chicago, Il, 2007.

[1] J. Liu, L. Xu, A. Caprihan, and V. Calhoun, "Extracting Principle Components for Discriminant Analysis of

fMRI Images," in Proc. ICASSP, 2008.

[2] J. Sui, J. Liu, L. Wu, A. Michael, L. Xu, T. Adali, and V. D. Calhoun, "A Constrained Coefficient ICA

Algorithm For Group Difference Enhancement," in Proc. ICASSP, 2008.

[3] L. Xu, J. Liu, T. Adali, and V. D. Calhoun, "Source Based Morphometry And Its Application To Identify

Relative Gray Matter And White Matter Differences In Schizophrenia Versus Controls," in Proc. ICASSP,

2008.

[4] L. Xu, G. D. Pearlson, and V. D. Calhoun, "Joint Source Based Morphometry to Identify Sources of Gray

Matter and White Matter Relative Differences in Schizophrenia Versus Healthy Controls," in Proc.ISMRM,

Toronto, Canada, 2008.

[5] L. Xu and V. D. Calhoun, "sMRI Complex Framework For Evaluating Relative Gray And White Matter

Group Differences," in Proc. ISMRM, Honolulu, Hawaii, 2009.

[6] L. Xu and V. D. Calhoun, "Source Based Morphometry: Approaches to Identify Gray and White Matter

Group Differences with Application to Schizophrenia," in Proc. HBM, San Francisco, CA, 2009.

[2] L. Xu, K. Groth, G. Pearlson, D. Schretlen, and V. Calhoun, "Source Based Morphometry: The Use of

Independent Component Analysis to Identify Gray Matter Differences with Application to Schizophrenia,"

Hum Brain Mapp, Under revision.

[3] L. Xu, G. Pearlson, and V. Calhoun, "Joint Source Based Morphometry to Identify Relative Gray Matter and

White Matter Group Differences," NeuroImage, vol. 44, pp. 777-789, 2009.

Rogers Silva

PhD Student, University of New Mexico, Dept. of ECE, pre-qualifying

Role: Advisor for MS, Advisor for PhD

Mr. Silva is a currently a PhD student funded from my NIH R01 grant. He contributed to a

technical paper published this year, and is currently working on a journal article on the selection

of imaging biomarkers from multimodal data.

Publications: [1] V. D. Calhoun, R. Silva, and J. Liu, "Identification of Multimodal MRI and EEG Biomarkers Using Joint-

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ICA and Divergence Criteria," in Proc.MLSP, 2007.

[2] R. F. Silva and V. D. Calhoun, "Identification of Brain Imaging Biomarkers by Optimized Selection of

Multimodal Independent Components," in Proc. IEEE SSIAI, Santa Fe, NM, 2008.

[3] R. Silva and V. D. Calhoun, "Identification of Brain Image Biomarkers by Optimized Selection of

Multimodal Datasets," in Proc.ISMRM, Toronto, 2008.

[4] R. Silva and V. D. Calhoun, "Divergence Measurements for the Optimal Identification of Multimodal

Biomarkers," in Proc. HBM, San Francisco, CA, 2009.

[5] R. Silva and V. D. Calhoun, "Evaluating Joint Histograms in a Joint ICA Fusion Framework: Methods for

Feature Extraction and Component Selection," in Human Brain Mapping, Barcelona, Spain, 2010.

Vamsi Potluru

MS/PhD Student, University of New Mexico, Dept. of CS, post-qualifying


Vamsi completed his Masters with me and now is working on his PhD thesis and expects to

finish next year. During his time with me he has published multiple referreed conference papers

and is working on several journal articles.

Publications: [1] V. Potluru and V. D. Calhoun, "Group Learning using NMF Variants," in Proc.ISCAS, 2008.

[2] V. Potluru, S. M. Plis, and V. D. Calhoun, "Sparse shift-invariant NMF," in Proc. IEEE SSIAI, Santa Fe,

NM, 2008.

[3] S. M. Plis, V. Potluru, V. D. Calhoun, and T. Lane, "Correlated Noise: How it Breaks NMF, and What to

Do About It," in Proc. MLSP, Grenoble, France, 2009.

[4] V. Potluru, S. M. Plis, M. Morup, V. D. Calhoun, and T. Lane, "Efficient Multiplicative updates for Support

Vector Machines," in Proc. SDM, Sparks, NV, 2009.

Lei Wu

PhD Student, University of New Mexico, post-qualifying


Publications: [1] J. Sui, J. Liu, L. Wu, A. Michael, L. Xu, T. Adali, and V. D. Calhoun, "A Constrained Coefficient ICA


[2] L. Wu and V. D. Calhoun, "An Approach for Fusion between EEG and fMRI Data," in Proc.ISMRM,

Toronto, Canada, 2008.

[3] L. Wu, V. D. Calhoun, and T. Eichele, "Functional connectivity in eyes open vs. eyes closed resting state

fMRI," in Proc. HBM, San Francisco, CA, 2009.

[4] L. Wu, T. Eichele, and V. D. Calhoun, "Alpha Hemodynamic Responses in Eyes Open vs. Eyes Closed

Resting State EEG-fMRI," in Proc. HBM, Barcelona, Spain, 2010.

[5] V. D. Calhoun, L. Wu, K. A. Kiehl, T. Eichele, and G. D. Pearlson, "Aberrant Processing of Deviant Stimuli

in Schizophrenia Revealed by Fusion of FMRI and EEG Data," Acta Neuropsychiatria, In Press, PMC

pending #184787.

[6] L. Wu, T. Eichele, and V. D. Calhoun, "Reactivity of hemodynamic responses and functional connectivity

to different states of alpha synchrony: a concurrent EEG-fMRI study," NeuroImage, Submitted.

Michelle Juarez

MS Student, University of New Mexico

Role: Advisor for MS

Publications: [1] G. Machado, M. Juarez, V. P. Clark, R. L. Gollub, V. Magnotta, T. White, and V. D. Calhoun, "Probing

Schizophrenia With A Sensorimotor Task: Large-Scale (N=273) Independent Component Analysis Of First

Episode And Chronic Schizophrenia Patients," in Proc. Society for Neuroscience, San Diego, CA, 2007.

[2] M. Juarez, T. White, G. D. Pearlson, J. R. Bustillo, J. Lauriello, B. C. Ho, H. J. Bockholt, V. P. Clark, R.

Gollub, V. Magnotta, G. Machado, and V. D. Calhoun, "Functional connectivity differences in first episode

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and chronic schizophrenia patients during an auditory sensorimotor task revealed by independent component

analysis of a large multisite study," in Proc. HBM, San Francisco, CA, 2009.

[3] M. Juarez, C. Abbott, T. White, R. L. Gollub, G. D. Pearlson, J. R. Bustillo, J. Lauriello, B. C. Ho, H. J.

Bockholt, V. P. Clark, V. Magnotta, and V. D. Calhoun, "Sensory deficits in schizophrenia with a large-scale

independent component analysis of schizophrenia patients," Hum. Brain Map., Submitted.

Alex Franco

PhD Student, University of New Mexico (defended 2009)

Role: Served on PhD Committee

Currently director at imaging center in Brazil following post-doc at Emory University

Publications: [1] A. R. Franco, M. Mannell, J. Ling, B. Bedrick, V. D. Calhoun, and A. R. Mayer, "Connectivity Between

Consistent Resting State Networks and Fractional Anisotropy Revealed by Joint Independent Component

Analysis," in Proc. HBM, San Francisco, CA, 2009.

[2] A. R. Franco, J. Ling, A. Caprihan, V. D. Calhoun, R. Jung, G. L. Heileman, and A. R. Mayer, "Multimodal

and Multi-tissue Measures of Connectivity Revealed by Joint Independent Component Analysis," IEEE

JSTSP, vol. 2, pp. 986-997, 2008, PMC2748354.

[3] A. R. Franco, A. Pritchard, V. D. Calhoun, and A. R. Mayer, "Inter-rater and Inter-method Reliability of

Default Mode Network Selection," Hum Brain Mapp, vol. 30, pp. 2293-2303, 2009, PMC2751639.

[4] M. Mannell, A. R. Franco, V. D. Calhoun, J. M. Canive, R. J. Thoma, and A. R. Mayer, "Resting state and

task-induced deactivation: A methodological comparison in patients with schizophrenia and healthy

controls," Hum Brain Mapp, In Press, PMC pending #132340.

[5] M. Mannell, A. R. Franco, V. D. Calhoun, and A. R. Mayer, "Reproducibility, Reliability and Connectivity

of Resting State Networks," NeuroImage, Submitted.

Andrew Michael

PhD Student, Rochester Institute of Technology (defended 2009).


Currently Assistant Professor at MRN with academic affiliation with RIT.

Publications: [1] A. Michael, J. Fries, S. Baum, B. C. Ho, N. C. Andreasen, and V. D. Calhoun, "A Method to Analyze

Correlations between Multiple Brain Imaging Tasks to Characterize Schizophrenia," in Proc. IEEE SSIAI,

Santa Fe, NM, 2008.

[2] A. Michael, V. D. Calhoun, S. Baum, and N. C. Andreasen, "A Method to Classify Schizophrenia using

Inter-Task Spatial Correlations of Functional Brain Images," in Proc. EMBC, 2008.

[3] A. Michael, S. Baum, V. D. Calhoun, and A. Caprihan, "Correlations of Diffusion Tensor Imaging Values

and Symptom Scores in Patients with Schizophrenia," in Proc. EMBC, 2008.

[4] J. Sui, J. Liu, L. Wu, A. Michael, L. Xu, T. Adali, and V. D. Calhoun, "A Constrained Coefficient ICA


[5] A. Michael, S. Baum, V. P. Clark, R. Jung, K. O. Lim, T. White, B. C. Ho, R. L. Gollub, and V. D. Calhoun,

"Fusion of Structural-Functional Brain Images Reveals Differences in Schizophrenia in a Multi Site Study,"

in Proc. ISMRM, Honolulu, Hawaii, 2009.

[6] A. Michael, S. Baum, T. J. White, N. C. Andreasen, J. M. Segall, R. E. Jung, V. P. Clark, R. L. Gollub, S.

C. Schulz, J. L. Roffman, B. C. Ho, K. O. Lim, H. J. Bockholt, and V. D. Calhoun, "Inter-voxel Cross-

Correlation Reveals Aberrantly Low Structural and Functional Linkage in Schizophrenia in a Multi-Site

Study," in Proc. HBM, San Francisco, CA, 2009.

[7] A. Michael, V. D. Calhoun, G. D. Pearlson, S. Baum, and A. Caprihan, "An Analysis of using Diffusion

Tensor Imaging Measures and Symptom Scores to Classify Patients with Schizophrenia," in Proc. HBM, San


[8] A. Michael, V. D. Calhoun, G. Pearlson, S. Baum, and A. Caprihan, "Application of Canonical Correlation

Analysis to Identify Regions of Significant Correlation between Symptom Scores and DTI Measures in

Schizophrenia," in Proc. ISMRM, Honolulu, Hawaii, 2009.

[9] A. Michael, S. Baum, and V. D. Calhoun, "A Technique to Detect Outliers Automatically in Multi-Site fMRI

Data," in Proc. ISMRM, Honolulu, Hawaii, 2009.

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[10] U. Sakoglu, A. Michael, and V. D. Calhoun, "Classification of schizophrenia patients vs healthy controls

based on dynamic functional network connectivity," in Proc. HBM, San Francisco, CA, 2009.

[11] O. Demirci, M. C. Stevens, N. C. Andreasen, A. Michael, J. Liu, T. White, G. D. Pearlson, V. P. Clark, and

V. D. Calhoun, "Investigation of relationships between fMRI brain networks in the spectral domain using

ICA and Granger causality reveals distinct differences between schizophrenia patients and healthy controls,"


[12] A. Michael, S. Baum, J. Fries, B. C. Ho, R. Pierson, N. C. Andreasen, and V. D. Calhoun, "A Method to

Fuse fMRI Tasks Through Spatial Correlations: Applied to Schizophrenia," Human Brain Mapping, vol. 30,

pp. 2512-2529, 2009, PMC2711995.

[13] A. Michael, S. Baum, T. White, O. Demirci, N. C. Andreasen, J. M. Segall, R. E. Jung, G. D. Pearlson, V.

P. Clark, R. L. Gollub, S. C. Schulz, J. Roffmann, K. O. Lim, B. C. Ho, H. J. Bockholt, and V. D. Calhoun,

"Does Function Follow Form?: Methods to Fuse Structural and Functional Brain Images Show Decreased

Linkage in Schizophrenia," Hum Brain Mapp, In Press, PMC pending #184511.

[14] U. Sakoglu, G. D. Pearlson, K. A. Kiehl, Y. Wang, A. Michael, and V. D. Calhoun, "A Method for

Evaluating Dynamic Functional Network Connectivity and Task-Modulation: Application to Schizophrenia,"

MAGMA, In Press, PMC pending #180300.

Nicolle Correa

PhD Student, University of Maryland Baltimore County, Dept. of CSEE, post-proposal

Role: co-advisor (with Tülay Adalı) for Master’s thesis (received 2006), co-advisor for PhD

(graduated in 2010)

Work during her PhD student was funded from an NIH R01 grant. This training occured via e-

mail, phone conference, and monthly travel between Baltimore and Hartford and now Ms.

Correa is currently working in industry.

Publications: [1] N. Correa, T. Adali, Y. Li, and V. D. Calhoun, "Comparison of blind source separation algorithms for fMRI

using a new matlab toolbox: GIFT," in Proc.IEEE Int.Conf.Acoustics, Speech, Signal Processing (ICASSP),

Philadelphia, PA, 2005.

[2] N. Correa, T. Adali, Y. Li, and V. D. Calhoun, "Examining associations between fMRI and EEG data using

canonical correlation analysis," in Proc. ISBI, Washington, D.C., 2008, pp. 1251-1254.

[3] N. Correa, Y. Li, T. Adali, and V. D. Calhoun, "Fusion of fMRI, sMRI, and EEG Data Using Canonical

Correlation Analysis," in Proc.IEEE Int.Conf.Acoustics, Speech, Signal Processing (ICASSP), Taiwan,

2009.

[4] N. Correa, Y. Li, T. Adali, and V. D. Calhoun, "Investigating associations across fMRI, sMRI, and EEG

data for the auditory oddball task using canonical correlation analysis," in Proc. HBM, San Francisco, CA,

2009.

[5] P. Rodriguez, N. M. Correa, T. Adali, and V. D. Calhoun, "Quality map thresholding for de-Noising of

complex-valued fMRI data and its application to ICA of fMRI," in Proc. MLSP, Grenoble, France, 2009.

[6] N. Correa, T. Eichele, T. Adali, Y. Li, and V. D. Calhoun, "Fusion of Concurrent single Trial EEG Data and

FMRI Data Using Multi-set Canonical Correlation Analysis," in Proc. ICASSP, Dallas, TX, 2010.

[7] H. Li, T. Adali, N. Correa, P. Rodriguez, and V. D. Calhoun, "Flexible Complex ICA of fMRI Data," in

Proc. ICASSP, Dallas, TX, 2010.

[8] S. Ma, X. Li, N. Correa, T. Adali, and V. D. Calhoun, "Independent Subspace Analysis with Prior

Information for fMRI Data," in Proc. ICASSP, Dallas, TX, 2010.

[9] P. Rodriguez, T. Adali, H. Li, N. Correa, and V. D. Calhoun, "Phase Correction and Denoising for ICA of

Complex fMRI Data," in Proc. ICASSP, Dallas, TX, 2010.

[10] N. Correa, T. Adali, and V. D. Calhoun, "Performance of Blind Source Separation Algorithms for fMRI

Analysis," Mag.Res.Imag., vol. 25, p. 684, 2007, PMC2358930.

[11] N. Correa, Y. Li, T. Adali, and V. D. Calhoun, "Canonical correlation analysis for feature-based fusion of

biomedical imaging modalities to detect associative networks in Schizophrenia," IEEE JSTSP, vol. 2, pp.

998-1007, 2008, PMC2761661.

[12] N. Correa, T. Eichele, T. Adali, Y. Li, and V. D. Calhoun, "Multi-set canonical correlation analysis for the

fusion of concurrent single trial ERP and functional MRI," NeuroImage, In Press, PMC pending #180189.

[13] P. Rodriguez, N. Correa, T. Adali, T. Eichele, and V. D. Calhoun, "Quality Map Thresholding for De-

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Noising of Complex-Valued fMRI Data and its Applipcation to ICA of fMRI," Journal of Signal Processing

Systems, Submitted.

[14] W. Xiong, N. Correa, T. Adali, and V. D. Calhoun, "Order Selection of the Linear Mixing Model for

Complex-valued fMRI Data," IEEE JSTSP, Submitted.

Yiou Li

PhD, University of Maryland Baltimore County, Dept. of CSEE (defended 2008)

Role: co-advisor (with Tülay Adalı) for PhD thesis

Dr. Li was funded from an NIH R01 grant. This training occurred via e-mail, phone conferences,

and monthly travel between Baltimore and Hartford and Albuquerque.

Publications: [1] V. D. Calhoun, T. Adali, and Y. Li, "Independent component anlaysis of complex-valued functional magnetic

resonance imaging data by complex nonlinearities," in Proc.ISBI, 2004, pp. 984-987.

[2] Y. Li, T. Adali, and V. D. Calhoun, "Independent component analysis with feature selective filtering," in

Proc.MLSP, 2004.

[3] N. Correa, T. Adali, Y. Li, and V. D. Calhoun, "Comparison of blind source separation algorithms for fMRI

using a new matlab toolbox: GIFT," in Proc.IEEE Int.Conf.Acoustics, Speech, Signal Processing (ICASSP),

Philadelphia, PA, 2005.

[4] Y. Li, T. Adali, and V. D. Calhoun, "Feature-selective ICA and its convergence properties," in Proc.IEEE

Int.Conf.Acoustics, Speech, Signal Processing (ICASSP), 2005.

[5] Y. Li, T. Adali, and V. D. Calhoun, "Sample Dependence Correction For Order Selection In fMRI Analysis,"

in Proc.ISBI, 2006.

[6] Y. Li, T. Adali, and V. D. Calhoun, "A Model For Comparison Of Two Functional MRI Datasets By

Canonical Correlation Analysis And Independent Component Analysis," in Proc.MLSP, 2007.

[7] Y. Li, W. Wang, T. Adali, and V. D. Calhoun, "CCA for Joint Blind Source Separation of Multiple Datasets

with Application to Group fMRI Analysis," in Proc.MLSP, 2007.

[8] Y. Li, T. Adali, and V. Calhoun, "A multivariate model for comparison of two datasets and its application to

fMRI analysis," in Proc.MLSP, 2007.

[9] N. Correa, T. Adali, Y. Li, and V. D. Calhoun, "Examining associations between fMRI and EEG data using

canonical correlation analysis," in Proc. ISBI, Washington, D.C., 2008, pp. 1251-1254.

[10] Y. Li, W. Wang, T. Adali, and V. D. Calhoun, "CCA for Joint Blind Source Separation of Multiple Datasets

with Application to Group fMRI Analysis," in Proc. ICASSP, 2008.

[11] W. Wang, Y. Li, H. Li, T. Adali, and V. D. Calhoun, "On ICA of Complex-Valued fMRI: Advantages and

Order Selection," in Proc. ICASSP, 2008.

[12] N. Correa, Y. Li, T. Adali, and V. D. Calhoun, "Fusion of fMRI, sMRI, and EEG Data Using Canonical

Correlation Analysis," in Proc.IEEE Int.Conf.Acoustics, Speech, Signal Processing (ICASSP), Taiwan,

2009.

[13] N. Correa, Y. Li, T. Adali, and V. D. Calhoun, "Investigating associations across fMRI, sMRI, and EEG

data for the auditory oddball task using canonical correlation analysis," in Proc. HBM, San Francisco, CA,

2009.

[14] Y. Li, T. Adali, and V. D. Calhoun, "A group study of simulated driving fMRI data by multi-set canonical

correlation analysis," in Proc. HBM, San Francisco, CA, 2009.

[15] J. Sui, Y. Li, T. Adali, and V. D. Calhoun, "A New Joint Blind Source Separation Model for Two Datasets

and Its Application to Second-level FMRI Group Analysis," in Proc. HBM, San Francisco, CA, 2009.

[16] J. Sui, T. Adali, Y. Li, H. Yang, and V. D. Calhoun, "A review of multivariate methods in brain imaging

data fusion," in Proc. SPIE, San Diego, CA, 2009.

[17] N. Correa, T. Eichele, T. Adali, Y. Li, and V. D. Calhoun, "Fusion of Concurrent single Trial EEG Data

and FMRI Data Using Multi-set Canonical Correlation Analysis," in Proc. ICASSP, Dallas, TX, 2010.

[18] Y. Li, T. Adali, and V. D. Calhoun, "Estimating the number of independent components for fMRI data,"

Hum.Brain Map., vol. 28, pp. 1251-1266, 2007.

[19] Y. Li, T. Adali, and V. D. Calhoun, "A Feature-selective Independent Component Analysis Method for

Functional MRI," Int. J. Biomed. Imaging, 2007.

[20] N. Correa, Y. Li, T. Adali, and V. D. Calhoun, "Canonical correlation analysis for feature-based fusion of

biomedical imaging modalities to detect associative networks in Schizophrenia," IEEE JSTSP, vol. 2, pp.

998-1007, 2008, PMC2761661.

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[22] Y. Li, T. Adali, W. Wang, and V. D. Calhoun, "Joint Blind Source Separation by Multi-set Canonical

Correlation Analysis," IEEE Trans. Signal Processing, In Press, PMC pending #110331.

[23] W. Xiong, T. Adali, Y. Li, and V. D. Calhoun, "On entropy rate for the complex domain and its application

to i.i.d. sampling," IEEE Transactions on Signal Processing, In Press, PMC pending #184519.

Eduardo Castro

PhD, University of New Mexico (defended 2014)


Publications: [1] E. Castro, M. Martinez-Ramon, A. Caprihan, K. A. Kiehl, and V. D. Calhoun, "Complex fMRI data

classification using composite kernels: application to schizophrenia," in Proc. HBM, Quebec City, Canada,

2011.

[2] E. Castro, M. Martinez-Ramon, G. L. Heileman, and V. D. Calhoun, "Characterization of groups using

composite kernels and multi-source fMRI analysis data: Application to Schizophrenia," NeuroImage, vol.

58, pp. 526-536, 2011, PMC Pending #313196.

[3] J. Sui, H. He, G. D. Pearlson, T. Adalı, K. A. Kiehl, Q. Yu, V. P. Clark, E. Castro, T. White, B. Mueller, B.

C. Ho, N. C. Andreasen, and V. D. Calhoun, "Three-Way (N-way) Fusion of Brain Imaging Data Based on

mCCA+jICA and Its Application to Discriminating Schizophrenia," NeuroImage, in press.

Guilherme Machado

Undergraduate Exchange Student, University of New Mexico, Dept. of ECE

Role: Advisor for senior project

Guilherme was an undergraduate student from Brazil who spent the semester at UNM. He

worked with me on a project which resulting in a publication.

Publications: [1] G. Machado, V. P. Clark, R. L. Gollub, V. Magnotta, T. White, and V. D. Calhoun, "Probing Schizophrenia

with a Sensorimotor Task: Large-Scale (N=273) Independent Component Analysis of First Episode and

Chronic Schizophrenia Patients," in Proc. Society for Neuroscience San Diego, CA, 2007.

Michael Benevidez

Medical Student, University of New Mexico

Michael worked with me in 2007 on a research project.

Publications: [1] M. Benavidez, V. P. Clark, G. Kuperberg, K. Lim, and V. D. Calhoun, "Functional Networks Identified in

an Auditory Oddball Task of Chronic and First Episode Schizophrenia Patients (N=261) Collected from the

Mind Clinical Imaging Consortium," in Proc. Society for Neuroscience San Diego, CA, 2007.

Madiha Jafri

PhD Student, University of Virginia (defended 2008)

Madiha worked with me as a PhD student and has now graduated. Madiha has published

multiple conference papers and a journal article.

Publications: [1] M. Jafri and V. D. Calhoun, "Functional Classification of Schizophrenia Using Feed Forward Neural

Networks," in Proc.EMBS, 2006.

[2] M. Jafri and V. D. Calhoun, "Interdependencies among Resting-State networks in Schizophrenia using

Independent Component Analysis," in Proc.ISMRM, 2007.

[3] M. Jafri, G. D. Pearlson, and V. D. Calhoun, "A maximal-correlation approach using ICA for testing

functional network connectivity applied to Schizophrenia," in Proc.ISBI, 2007.

[4] M. Jafri, G. D. Pearlson, and V. D. Calhoun, "Resting State Functional Network Connectivity among ICA

105


Components using Bayesian Networks," in Proc.HBM, 2007.

[5] M. Jafri, G. D. Pearlson, M. Stevens, and V. D. Calhoun, "A Method for Functional Network Connectivity

Among Spatially Independent Resting-State Components in Schizophrenia," NeuroImage, vol. 39, pp. 1666-

1681, 2008, PMC pending #40720.

[6] C. I. Rzepecki, S. A. Meda, V. D. Calhoun, M. J. Jafri, R. S. Astur, and G. D. Pearlson, "Disruptions in

Functional Network Connectivity during Alcohol Intoxicated Driving," Alcoholism: Clinical and

Experimental Research, vol. 34, pp. 479-487, 2010, PMC pending #161788.

Matt Sutherland

PhD Student, University of New Mexico, Dept. of Psychology

Role: Served on dissertation committee (defended 2007)

Tom Eichele

PhD, University of Bergen, Norway

Role: Served on PhD committee

Currently: Faculty member at University of Bergen

Mr Eichele defended his PhD in 2007. He visited me for three weeks in 2005 and Aug 2007 and

summer 2009 and since then we have been collaborating closely and also I regularly visit

Norway to give an educational course.

Publications: [1] N. Swanson, T. Eichele, G. D. Pearlson, and V. D. Calhoun, "Lateral Differences in the Default Mode

Network in Schizophrenia," in The two halves of the brain: Information processing in the cerebral

hemispheres: MIT Press, 2009.

[2] T. Eichele, M. Moosmann, V. D. Calhoun, K. Specht, H. Nordby, and K. Hugdahl, "Joint ICA of


[3] T. Eichele, S. Debener, V. Calhoun, K. Specht, A. K. Engel, K. Hugdahl, D. Von Cramon, and M. Ullsperger,

"Prediction of human errors by maladaptive changes in event-related brain networks " in Proc.HBM, 2008.

[4] T. Eichele, R. Scheeringa, V. Calhoun, K. Hugdahl, and M. Bastiaansen, "Deconvolution of Hemodynamic

Responses from Alpha-band EEG," in Proc.HBM, 2008.

[5] T. Eichele, V. Calhoun, M. Moosmann, K. Specht, L. A. Jongsma, R. Quiroga, H. Nordby, and K. Hugdahl,

"Unmixing concurrent EEG-fMRI with parallel independent component analysis," in Proc.HBM, 2008.

[6] T. Eichele, S. Rachakonda, and V. D. Calhoun, "EEGIFT: A Toolbox for Group Independent Component

Analysis of Event-Related EEG," in Proc. SPR, Austin, TX, 2008.

[7] T. Eichele, S. Rachakonda, and V. D. Calhoun, "EEGIFT: A toolbox for group temporal ICA event-related

EEG," in Proc. HBM, San Francisco, CA, 2009.

[8] L. Wu, V. D. Calhoun, and T. Eichele, "Functional connectivity in eyes open vs. eyes closed resting state

fMRI," in Proc. HBM, San Francisco, CA, 2009.

[9] E. Allen, E. Erhardt, T. Eichele, A. R. Mayer, and V. D. Calhoun, "Comparison of pre-normalization methods

on the accuracy of group ICA results," in Proc. HBM, Barcelona, Spain, 2010.

[10] N. Correa, T. Eichele, T. Adali, Y. Li, and V. D. Calhoun, "Fusion of Concurrent single Trial EEG Data

and FMRI Data Using Multi-set Canonical Correlation Analysis," in Proc. ICASSP, Dallas, TX, 2010.

[11] S. M. Plis, V. D. Calhoun, M. P. Weisend, T. Eichele, E. Besada-Portas, and T. Lane, "MEG and fMRI for

nonlinear estimation of neural activity," in Proc. NIPS Workshop on Connectivity Inference and

NeuroImaging, Whistler, CO, 2010.

[12] L. Wu, T. Eichele, and V. D. Calhoun, "Alpha Hemodynamic Responses in Eyes Open vs. Eyes Closed

Resting State EEG-fMRI," in Proc. HBM, Barcelona, Spain, 2010.

[13] T. Eichele, V. D. Calhoun, M. Moosmann, K. Specht, M. Jongsma, R. Quiroga, H. Nordby, and K. Hugdahl,

"Unmixing concurrent EEG-fMRI with parallel independent component analysis," Int. J. Psych., vol. 67, pp.

222-234, 2008, PMC2649878.

[14] T. Eichele, S. Debener, V. D. Calhoun, K. Specht, A. K. Engel, K. Hugdahl, D. Y. Cramon, and M.

Ullsperger, "Prediction of human errors by maladaptive changes in event-related brain networks," Proc Natl

Acad Sci U S A, vol. 105, pp. 6173-6178, 2008.

[15] M. Moosmann, T. Eichele, H. Nordby, K. Hugdahl, and V. D. Calhoun, "Joint Independent Component

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Analysis for Simultaneous EEG-fMRI: Principle and Simulation," Int. J. Psych., vol. 67, pp. 212-221, 2008,

PMC2649876.

[16] V. D. Calhoun, T. Eichele, and G. Pearlson, "Functional Brain Networks in Schizophrenia: A Review,"

Frontiers in Neuroscience, vol. 3, pp. 1-12, 2009.

[17] T. Eichele, V. D. Calhoun, and S. Debener, "Mining EEG-fMRI using independent component analysis,"

Int. J. Psych., vol. 73, pp. 53-61, 2009, PMC2693483.

[18] V. D. Calhoun, L. Wu, K. A. Kiehl, T. Eichele, and G. D. Pearlson, "Aberrant Processing of Deviant Stimuli

in Schizophrenia Revealed by Fusion of FMRI and EEG Data," Acta Neuropsychiatria, In Press, PMC

pending #184787.



[20] N. Swanson, T. Eichele, G. D. Pearlson, K. A. Kiehl, and V. D. Calhoun, "Lateral Differences in the Default

Mode Network in Healthy Controls and Schizophrenia Patients," Hum Brain Mapp, In Press, PMC pending

#180312.

Nicole Giuliani

Role: Primary supervisor of post-graduate training period, 2003-2005

Graduated with PhD from Stanford University and current doing post-doc in Oregon.

Publications: [1] V. D. Calhoun, T. Adali, N. Giuliani, J. J. Pekar, G. D. Pearlson, and K. A. Kiehl "A Method for Multimodal

Analysis of Independent Source Differences in Schizophrenia: Combining Gray Matter Structural and

Auditory Oddball Functional Data," Hum.Brain Map., 2005 (in press).

[2] N. Giuliani, G. D. Pearlson, and V. D. Calhoun, "Alcohol Versus Marinol Intoxication Effects on Visual

Perception: An FMRI Study," in Proc. ICANA, New Haven, CT, 2004.

[3] N. Giuliani, V. D. Calhoun, G. D. Pearlson, A. Francis, and R. W. Buchanan, "Voxel-Based Morphometry

Versus Regions of Interest: A Comparison of Two Methods for Analyzing Gray Matter Disturbances in

Schizophrenia," Schizophr. Res., vol. 74, pp. 135-147, 2005.

[4] K. Groth, T. Benios, N. Giuliani, V. D. Calhoun, and G. D. Pearlson, "General Intelligence Correlates to

Brain Structure Differently in Men and Women," in Proc. SAGE IV, Winston-Salem, NC, 2005.

Matthais Moosman

PhD, University of Bergen, Norway

Role: Member of PhD committee

Mr Moosman completed his PhD dissertation in medical physics.

Publications: [1] T. Eichele, M. Moosmann, V. D. Calhoun, K. Specht, H. Nordby, and K. Hugdahl, "Joint ICA of


[2] T. Eichele, V. Calhoun, M. Moosmann, K. Specht, L. A. Jongsma, R. Quiroga, H. Nordby, and K. Hugdahl,

"Unmixing concurrent EEG-fMRI with parallel independent component analysis," in Proc.HBM, 2008.

[3] T. Eichele, V. D. Calhoun, M. Moosmann, K. Specht, M. Jongsma, R. Quiroga, H. Nordby, and K. Hugdahl,

"Unmixing concurrent EEG-fMRI with parallel independent component analysis," Int. J. Psych., vol. 67, pp.

222-234, 2008.

[4] M. Moosmann, T. Eichele, H. Nordby, K. Hugdahl, and V. D. Calhoun, "Joint Independent Component

Analysis for Simultaneous EEG-fMRI: Principle and Simulation," Int. J. Psych., vol. 67, pp. 212-221, 2008.

David Schneider:

Masters Graduate Student in Biomedical Engineering, University of Connecticut

Role: co-advisor, 2004-2005

Accepted to Columbia PhD Graduate Program, Fall 2006

Abbie Garrity:

Undergraduate Student, Trinity College

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Role: Advisor for volunteer project, 2005-

Differences in the default mode network in schizophrenia, Fall/Spring 2004

2006 Brain Dance Research Award

Publications: [1] A. Garrity, G. D. Pearlson, K. McKiernan, D. Lloyd, K. A. Kiehl, and V. D. Calhoun, "Aberrant functional

connectivity of the 'default mode' in schizophrenia," in Trinity Papers, 2006.

[2] A. Garrity, G. D. Pearlson, K. McKiernan, D. Lloyd, K. A. Kiehl, and V. D. Calhoun, "Aberrant functional

connectivity of the 'default mode' in schizophrenia," in Neuron, 2006.

[3] A. Garrity, G. D. Pearlson, K. McKiernan, D. Lloyd, K. A. Kiehl, and V. D. Calhoun, "Aberrant 'default

mode' functional connectivity in schizophrenia," Am.J.Psychiatry, vol. 164, pp. 450-457, 2007.

Samara Reynolds:

Undergraduate Student, Trinity College

Role: Advisor for senior project, 2004-2005

Publications: [1] M. Assaf, S. Reynolds, V. Calhoun "Laterality changes in verbal binding associated with schizophrenia"

Biol. Psych., 2006.

Hichem Snoussi

Post-doctoral fellow

Role: Primary mentor

Publications: [1] H. Snoussi and V. D. Calhoun, "Bayesian Blind Source Separation for Brain Imaging," in Proc. SETIT, Susa,

Tunisia, 2005.

[2] H.Snoussi and V. D. Calhoun, "Regularized Spectral Matching for Blind Source Separation. Application to

FMRI Imaging," IEEE Trans. Signal Proc., 2005.

[3] H. Snoussi and V. D. Calhoun, "Bayesian Blind Source Separation for Brain Imaging," in Proc. ICIP,

Genova, Italy, 2005.

Michael Stevens, Ph.D.

Appointed junior faculty in the Olin Neuropsychiatry Research Center, 2002-2004

Role: co-advisor 2002-2004; co-mentor on K-Award (2005-2009).

Currently an independent investigator

Publications: [1] V. D. Calhoun, M. Stevens, G. D. Pearlson, and K. A. Kiehl, "Fmri Analysis with the General Linear Model:

Removal of Latency-Induced Amplitude Bias by Incorporation of Hemodynamic Derivative Terms,"

NeuroImage, vol. 22, pp. 252-257, 2004.

[2] K. A. Kiehl, M. Stevens, K. R. Laurens, G. D. Pearlson, V. D. Calhoun, and P. F. Liddle, "The Amygdala

as a Salience Detector: Evidence from a Large-Scale Study (N=100) of Auditory Target Detection " in

Proc.HBM, Budapest, Hungary, 2004.

[3] V. D. Calhoun, T. Adali, M. Stevens, K. A. Kiehl, and J. J. Pekar, "Semi-Blind Ica of Fmri: A Method for

Utilizing Hypothesis-Derived Time Courses in a Spatial Ica Analysis," NeuroImage, vol. 25, pp. 527-538,

2005.

[4] K. A. Kiehl, M. Stevens, K. R. Laurens, G. D. Pearlson, V. D. Calhoun, and P. F. Liddle, "An Adaptive

Reflexive Processing Model of Neurocognitive Function: Supporting Evidence from a Large Scale (N=100)

Fmri Study of an Auditory Oddball Task," NeuroImage, vol. 25, pp. 899-915, 2005.

[5] M. Stevens, V. D. Calhoun, and K. A. Kiehl, "Hemispheric Differences in Hemodynamics Elicited by

Auditory Oddball Stimuli," NeuroImage, vol. 26, pp. 782-792, 2005.

[6] M. Stevens, V. D. Calhoun, and K. A. Kiehl, "Fmri in an Oddball Task: Effects of Target-to-Target Interval,"

Psychophysiology, vol. 42, pp. 636-642, 2005.

[7] M. Stevens, K. A. Kiehl, G. D. Pearlson, and V. D. Calhoun, "Functional Neural Circuits for Mental

Timekeeping," in Human Brain Mapping, Florence, Italy, 2005.

108


[8] G. D. Pearlson, D. A. Wallace, V. D. Calhoun, M. Assaf, M. C. Stevens, S. Meda, and J. Gelernter, "Alpha7

Nicotinic Cholinergic Receptor (Chrna7)Polymorphisms Discriminate Figural Memory Abilities in Healthy

Adults and Influence Related Structural and Functional Mri Patterns," in Proc.ACNP, 2006.

[9] M. C. Stevens, K. A. Kiehl, G. Pearlson, and V. D. Calhoun, "Functional Neural Circuits for Mental

Timekeeping," Hum Brain Mapp, Aug 30 2006.

[10] M. Stevens, K. A. Kiehl, G. D. Pearlson, and V. D. Calhoun, "Functional Neural Circuits for Mental

Timekeeping," Hum.Brain Map., vol. 28, 2007.

[11] M. Stevens, K. A. Kiehl, G. D. Pearlson, and V. D. Calhoun, "Functional Neural Networks Underlying

Response Inhibition in Adolescents and Adults," Behavior and Brain Sciences, vol. 181, 2007.

[12] M. Stevens, K. A. Kiehl, G. D. Pearlson, and V. D. Calhoun, "Functional Neural Networks Underlying

Response Inhibition in Adolescents and Adults," in Human Brain Mapping, 2007.

[13] M. Stevens, V. D. Calhoun, G. D. Pearlson, and K. A. Kiehl, "Brain Network Dynamics During Error

Commission," Hum.Brain Map., In Press.

[14] M. Jafri, G. D. Pearlson, M. Stevens, and V. D. Calhoun, "Aberrant Connectivity among Spatially

Independent Resting-State Networks in Schizophrenia," Hum.Brain Map., Submitted.

[15] M. Stevens, G. D. Pearlson, V. D. Calhoun, and K. A. Kiehl, "Are Separate Neural Networks Specialized

for Regular Movement Timing? An Examination of Brain Hemodynamics During Regularly-Paced Finger

Tapping," Neuropsychologia, Submitted.

Mona Noureldin Mohamed, M.D.

Postdoc, Johns Hopkins University

Role: co-advisor for post graduate training period, primary mentor for fMRI training.

Publications: [1] M. A. Mohamed, D. M. Yousem, A. Tekes, N. M. Browner, and V. D. Calhoun, "Timing of Cortical

Activation: a Latency-Resolved Event-Related Functional MR Imaging Study," AJNR Am. J. Neuroradiol.,

vol. 24, pp. 1967-1974, 2003.

[2] M. Noureldin, D. M. Yousem, A. Tekes, N. Browner, and V. D. Calhoun, "Correlation Between the Amplitude

of Cortical Activation and Reaction Time: An FMRI Study," in Proc. ASNR, Washington, D.C., 2003.

[3] A. Tekes, M. Noureldin, M. Kraut, V. D. Calhoun, N. Browner, and D. M. Yousem, "Effect of Age on

Visuomotor Functional MR Imaging," in Proc. ASNR, Washington, D.C., 2003.

[4] M. A. Mohamed, D. M. Yousem, A. Tekes, N. Browner, and V. D. Calhoun, "Correlation Between the

Amplitude of Cortical Activation and Reaction Time: a Functional MRI Study," AJR Am. J. Roentgenol., vol.

183, pp. 759-765, 2004.

[5] M. A. Mohamed, D. M. Yousem, I. Kusevic, V. D. Calhoun, C. Cristinzio, N. A. Honeycutt, A. El-Deib, M.

Yassa, B. Caffo, and S. Basset, "Lack of Education Effect on Brain Activity in a Memory Based Functional

MRI Experiment," in Proc. ASNR, 2004.

[6] A. Tekes, V. D. Calhoun, M. A. Mohamed, B. Yagmurlu, N. Mikhelashvili-Browner, and D. M. Yousem,

"Effect of Age in Volume of Activation in Block Design and Single-Event Paradigms Using Visuomotor

Functional MR Imaging," in Proc. ASNR, 2004.

[7] A. Tekes, M. A. Mohamed, N. Mikhelashvili-Browner, V. D. Calhoun, and D. M. Yousem, "Effect of Age on

Visuomotor Functional MR Imaging," in Proc. ASNR, 2004.

[8] A.Tekes, M. Noureldin, M.Kraut, V.D.Calhoun, N.Browner, and D.M.Yousem, "Effect of Age on Visuomotor

Functional MR Imaging," to appear Acad. Radiol., 2005.

Kim Celone

Role: tutor for post-graduate training period, 2003-2005

Accepted to PhD Program, Boston College

Publications: [1] K. Celone, V. D. Calhoun, A. Driscoll, E. Rand-Giovannetti, E. Chua, B. Dickerson, M. Albert, D. Blacker,

and R. Sperling "ICA of fMRI Associative Memory Networks in Normal Aging, MCI and Mild AD," 2005. (in

preparation).

[2] R. Sperling, E. Chua, B. Dickerson, D. Blacker, M. Albert, V. D. Calhoun, and K. Celone, "Compensatory

Recruitment of Memory and Attentional Networks in Mild Cognitive Impairment," in Proc. Amer. Acad. of

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Neur., San Diego, CA, 2005.

[3] K. Celone, V. D. Calhoun, A. Driscoll, E. Rand-Giovannetti, E. Chua, B. Dickerson, M. Albert, D. Blacker,

and R. Sperling, "ICA of FMRI Associative Memory Networks in Normal Aging, MCI and Mild AD," in Proc.

Soc. for Neuroscience, San Diego, CA, 2004.

Martin Hejnar

Role: Primary supervisor of post-graduate training period, 2003-2004

Publications: [1] M. P. Hejnar, M. M. Kurtz, K. A. Keihl, G. D. Pearlson, and V. D. Calhoun, "Performance on the Penn

Conditional Exclusion Task (PCET) in Patients With Schizophrenia (SZ) and Healthy Controls: An FMRI

Analysis," in Proc. SBP, 2004.

[2] D. Kim, M. P. Hejnar, K. A. Kiehl, E. Bedrick, and V. D. Calhoun "Interparticipant Correlations: A Model

Free FMRI Analysis Technique," Hum.Brain Map., 2007 (in press).

Eric Egolf:

Role: co-advisor senior project

Publications: [1] E. Egolf and V. D. Calhoun, "Group ICA of FMRI Toolbox," in Proc. Biomedical Engineering Alliance and

Consortium, 2003.

[2] E. Egolf, K. A. Kiehl, and V. D. Calhoun, "Group ICA of FMRI Toolbox (GIFT)," in Proc. HBM, Budapest,

Hungary, 2004.

[3] B. Hong, G. D. Pearlson, E. Egolf, and V. D. Calhoun, "Identification of Brain Activity in a Visual Stimulation

Task - An Adaptive ICA Approach for FMRI Data," in Proc. HBM, 2004.

Jinsuh Kim, M.D.:

Post doctoral fellow

Role: primary supervisor 2002-2004

Joined faculty at University of Wisconsin

Publications: [1] J. Kim, R. Kanaan, V. D. Calhoun, S. Mori, and G. D. Pearlson, "More Averages Vs. More Gradients: Which

Is Right for Reliable Diffusion Tensor MRI?," in Proc. RSNA, Chicago, IL, 2002.

[2] V. D. Calhoun, J. Kim, and G. D. Pearlson, "FMRI Connectivity Measured by Mutual Information and

Correlation: Linear Dependence Vs. General Dependence," in Proc. ISMRM, Toronto, Canada, 2003.

[3] J. Kim, V. D. Calhoun, and G. D. Pearlson, "DTI of Huntington Disease," in Proc. ISMRM, Toronto, Canada,

2003.

[4] J. Kim, V. D. Calhoun, and G. D. Pearlson, "3D Visualization of White Matter Tracts Using LIC," in Proc.

ASNR, Washington, D.C., 2003.

[5] J. Kim and V. D. Calhoun, "Evaluation of Quantization Error in DICOM Images for FMRI Application," in

Proc. RSNA, Chicago, IL, 2003.

curriculum vitae name: vince d. calhoun, ph.d. · 2017-03-22 · 6 revised 23 january 2017 role:...

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