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Copyright © 2009 Pearson Education, Inc. Chapter 12 DNA Organization in Chromosomes Copyright © 2009 Pearson Education, Inc.

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Page 1: Copyright © 2009 Pearson Education, Inc. Chapter 12 DNA Organization in Chromosomes Copyright © 2009 Pearson Education, Inc

Copyright © 2009 Pearson Education, Inc.

Chapter 12DNA Organization in

Chromosomes

Copyright © 2009 Pearson Education, Inc.

Page 2: Copyright © 2009 Pearson Education, Inc. Chapter 12 DNA Organization in Chromosomes Copyright © 2009 Pearson Education, Inc

Copyright © 2009 Pearson Education, Inc.

• Single nucleic acid molecule

• No proteins

• DNA or RNA

• Single or double stranded

• Circular or linear

• Packed into a small volume

Viral Genetic Material

Page 3: Copyright © 2009 Pearson Education, Inc. Chapter 12 DNA Organization in Chromosomes Copyright © 2009 Pearson Education, Inc

Copyright © 2009 Pearson Education, Inc.

• Single nucleic acid molecule

• Some proteins

• Always double stranded DNA

• Large, circular chromosome

• Packed into a small volume (nucleoid region)

Bacterial Genetic Material

Page 4: Copyright © 2009 Pearson Education, Inc. Chapter 12 DNA Organization in Chromosomes Copyright © 2009 Pearson Education, Inc

Copyright © 2009 Pearson Education, Inc. Table 12.1

Page 5: Copyright © 2009 Pearson Education, Inc. Chapter 12 DNA Organization in Chromosomes Copyright © 2009 Pearson Education, Inc

Copyright © 2009 Pearson Education, Inc. Figure 12.2

Page 6: Copyright © 2009 Pearson Education, Inc. Chapter 12 DNA Organization in Chromosomes Copyright © 2009 Pearson Education, Inc

Copyright © 2009 Pearson Education, Inc. Figure 12.3

Page 7: Copyright © 2009 Pearson Education, Inc. Chapter 12 DNA Organization in Chromosomes Copyright © 2009 Pearson Education, Inc

Copyright © 2009 Pearson Education, Inc. Figure 12.4

Supercoiling

Page 8: Copyright © 2009 Pearson Education, Inc. Chapter 12 DNA Organization in Chromosomes Copyright © 2009 Pearson Education, Inc

Copyright © 2009 Pearson Education, Inc.

• Polytene chromosomes

• Lamp brush chromosomes

Specialized Eukaryotic Chromosome Organizations

Page 9: Copyright © 2009 Pearson Education, Inc. Chapter 12 DNA Organization in Chromosomes Copyright © 2009 Pearson Education, Inc

Copyright © 2009 Pearson Education, Inc. Figure 12.5

Polytene

Page 10: Copyright © 2009 Pearson Education, Inc. Chapter 12 DNA Organization in Chromosomes Copyright © 2009 Pearson Education, Inc

Copyright © 2009 Pearson Education, Inc. Figure 12.6

Polytene

Page 11: Copyright © 2009 Pearson Education, Inc. Chapter 12 DNA Organization in Chromosomes Copyright © 2009 Pearson Education, Inc

Copyright © 2009 Pearson Education, Inc. Figure 12.7

Lamp Brush

Page 12: Copyright © 2009 Pearson Education, Inc. Chapter 12 DNA Organization in Chromosomes Copyright © 2009 Pearson Education, Inc

Copyright © 2009 Pearson Education, Inc.

• Only visible during mitosis

• Easier to move DNA around

• Normally uncoiled and dispersed

• Chromatin

• Available for genetic activity

Eukaryotic Chromosomes

Page 13: Copyright © 2009 Pearson Education, Inc. Chapter 12 DNA Organization in Chromosomes Copyright © 2009 Pearson Education, Inc

Copyright © 2009 Pearson Education, Inc.

• DNA has a substantial amount of associated proteins

• Histones

• Non-histones

Chromatin

Page 14: Copyright © 2009 Pearson Education, Inc. Chapter 12 DNA Organization in Chromosomes Copyright © 2009 Pearson Education, Inc

Copyright © 2009 Pearson Education, Inc. Table 12.2

Page 15: Copyright © 2009 Pearson Education, Inc. Chapter 12 DNA Organization in Chromosomes Copyright © 2009 Pearson Education, Inc

Copyright © 2009 Pearson Education, Inc. Figure 12.8

Page 16: Copyright © 2009 Pearson Education, Inc. Chapter 12 DNA Organization in Chromosomes Copyright © 2009 Pearson Education, Inc

Copyright © 2009 Pearson Education, Inc. Figure 12.9

Page 17: Copyright © 2009 Pearson Education, Inc. Chapter 12 DNA Organization in Chromosomes Copyright © 2009 Pearson Education, Inc

Copyright © 2009 Pearson Education, Inc.

• Highly folded DNA presents a problem – genes are inaccessible

• High resolution images showed how chromatin could be remodeled

• Histone tails

• Remodeling

• Acetylations

• Methylation

• Phosphorylation

Chromatin Remodeling

Page 18: Copyright © 2009 Pearson Education, Inc. Chapter 12 DNA Organization in Chromosomes Copyright © 2009 Pearson Education, Inc

Copyright © 2009 Pearson Education, Inc. Figure 12.10

Page 19: Copyright © 2009 Pearson Education, Inc. Chapter 12 DNA Organization in Chromosomes Copyright © 2009 Pearson Education, Inc

Copyright © 2009 Pearson Education, Inc.

• Euchromatin

• Light staining

• Active genes

• Uncoiled during interphase

• Heterochromatin

• Heavy staining

• No (few) active genes

• Tightly packed during interphase

Euchromatin vs Heterochromatin

Page 20: Copyright © 2009 Pearson Education, Inc. Chapter 12 DNA Organization in Chromosomes Copyright © 2009 Pearson Education, Inc

Copyright © 2009 Pearson Education, Inc.

• Enabled further characterization of chromosomes (previously only size)

• C – banding

• Centromeres stain darkly

• G – banding

• Digest with trypsin before staining

Banding Patterns

Page 21: Copyright © 2009 Pearson Education, Inc. Chapter 12 DNA Organization in Chromosomes Copyright © 2009 Pearson Education, Inc

Copyright © 2009 Pearson Education, Inc. Figure 12.11

C – Banding

Page 22: Copyright © 2009 Pearson Education, Inc. Chapter 12 DNA Organization in Chromosomes Copyright © 2009 Pearson Education, Inc

Copyright © 2009 Pearson Education, Inc. Figure 12.12

G – Banding

Page 23: Copyright © 2009 Pearson Education, Inc. Chapter 12 DNA Organization in Chromosomes Copyright © 2009 Pearson Education, Inc

Copyright © 2009 Pearson Education, Inc. Figure 12.13

X chromosome banding pattern

Page 24: Copyright © 2009 Pearson Education, Inc. Chapter 12 DNA Organization in Chromosomes Copyright © 2009 Pearson Education, Inc

Copyright © 2009 Pearson Education, Inc.

• Satellite DNA

• Centromeric sequences

• Telomeric sequences

• Middle (moderate) repetitive DNA

• VNTRs

• STRs

• Transposable sequences

• Pseudogenes

Repetitive Sequences

Page 25: Copyright © 2009 Pearson Education, Inc. Chapter 12 DNA Organization in Chromosomes Copyright © 2009 Pearson Education, Inc

Copyright © 2009 Pearson Education, Inc. Figure 12.15

Satellite DNA

Page 26: Copyright © 2009 Pearson Education, Inc. Chapter 12 DNA Organization in Chromosomes Copyright © 2009 Pearson Education, Inc

Copyright © 2009 Pearson Education, Inc. Figure 12.16

Satellite DNA

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Copyright © 2009 Pearson Education, Inc. Figure 12.17

Centromeric Sequences