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    ClinicalEnzymology

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    ENZYMES

    Organic catalyst that hasten a chemical reaction without

    themselves being consumed or undergoing a chemical change.

    Protein in nature with a high degree of specificity for a certain

    substrate or class of substrate

    SUBSTRATE

    Are substances that are acted upon by enzymes

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    Enzyme Nomenclature

    Enzymes are named acc to the ff:

    A. Name of substrate with the addition of the

    suffix ase

    Ex.

    Lipid-lipase

    Proteins-protease

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    B. Type of reaction they catalyse

    Ex.

    Transferase

    transfer of AMINO GROUP from one substrate to another

    Kinase

    transfer of PHOSPHATE GROUP from a high energy phosphate

    compound to its substrate

    Phosphatase effect of hydrolysis on phosphate esters

    Dehydrogenase

    removal of hydrogen atoms from its substrate

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    C. Numerical designation given by the Enzyme

    Commission(E.C.)

    Ex.

    E.C. 1.1.127 Lactate dehydrogenase

    E.C. 3.2.1.1 Amylase

    1stnumberclass to which the enzyme belongs

    2ndand 3rdnumbersub class

    4thspecific serial number of the enzyme

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    GENERAL CLASSIFICATION OF ENZYMES

    Based on the reaction mechanism each enzyme

    catalyzes

    1. OXIDO-REDUCTASES

    removal or addition of electrons

    Reduction-oxidation(Redox) reaction

    Oxidation-loss of electron

    Reduction-gain of electron

    Ex.

    Removal of hydrogenDehydrogenase

    Lactate dehydrogenase

    Glucose-6-phosphate dehydrogenase

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    Lactate dehydrogenase

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    2. TRANSFERASES

    Catalyze the transfer of a chemical group from

    one substrate to another

    Ex.

    Aminotransferase -Amino group

    Aspartate aminotransferase

    Alanine aminotransferase

    Kinase/phosphokinase -Phosphate group

    Creatine kinase/creatine phosphokinase

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    AST-Aspartate Aminotransferase

    SGOT-Serum Glutamate Oxaloacetate Transaminase

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    ALT-Alanine Aminotransferase

    SGPT-Serum Glutamate Pyruvate Transaminase

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    3. HYDROLASES

    Hydrolyze the splitting of a bond by the addition of

    water(hydrolysis reaction)

    Ex.: ALP Alkaline phosphatase

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    4. Lyases

    Removes groups from substrate without hydrolysis

    The product contains double bonds

    Ex. Aldolase

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    5. ISOMERASES

    Intramolecular rearrangement of the substrate compound

    Same molecular formula but different physical structure

    6. LIGASES

    Synthethases

    Joins two substrate molecules together

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    Terms associated with enzymes:

    HOLOENZYMES

    Active substance formed by the combination of

    coenzyme(cofactor) and apoenzyme

    HOLOENZYME

    APOENZYME COFACTOR

    (PROTEIN MOIETY) (NON-PROTEIN MOIETY)

    COENZYME

    ACTIVATOR

    VITAMINS METAL IONS

    NAD Zn+2

    NADP Ca+2

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    APOENZYME

    Protein portion of an enzyme

    Subject to denaturation, in which enzyme loses its activity

    Catalytically inactive protein when cofactor is removed

    Heat labile and dialyzable

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    COFACTOR

    Non-protein subs/compounds needed by an enzyme before

    enzymatic activity can be manifested

    Thermostable and dialyzable

    2 types:

    A. Coenzyme

    B. Activator

    A. Coenzyme

    Organic molecule

    It hasten enzymatic reaction but undergoes a change or is

    consumed to another product

    Ex.

    NAD-Nicotinamide Adenine Dinucleotide

    NADP-Nicotinamide Adenine Dinucleotide Phosphate

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    B.Activator

    Metal ion

    In such, the metal ion may serve as:

    A. A bridge to hold the substrate and enzyme together

    B. The primary catalytic center

    C. As stabilizing agent in the conformation for catalytic activity

    Ex.

    Amylase Cl-, Br

    LDH- Zn+2

    Lipase Ca+2

    CPK Mg+2

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    ISOENZYME

    Enzymes present in an individual with similar enzymatic activity

    but differ in their physical biochemical and immunological

    characteristics

    Ex. LDHLactate dehydrogenase

    LDH 1

    LDH 2

    LDH 3

    LDH 4

    LDH 5

    CKCreatine kinase

    CK-MB

    CK-MM

    CK-BB

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    METALLOENZYME

    Enzyme whose metal ions are intrinsically part of the molecule

    such as catalases and cytochrome oxidase

    PROENZYME Inactive precursor of enzymes

    Also referred to as zymogen

    SUBSTRATE Substances acted upon by the enzyme which are specific for ach

    of heir particular enzymes

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    ENZYME KINETICS

    An enzyme(E) catalyses a reaction by combining with its substrate(S)to create an enzyme-substrate complex(ES).

    E + S ---------ES

    The ES complex according to Michelis and Menten can either:

    dissociate back to E + S

    breakdown to product(P) and free enzyme(provided that the producthas a low affinity for the enzyme)

    K2 E + S ---------ES--------E + S

    K3

    E + S ---------ES--------P + E

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    ENZYME SPECIFICITY

    Theories that explain the high degree of specificity of an enzyme for

    their particular substrate or class of substrate:

    1. Emil Fischers LOCK and KEY THEORY:

    Rigid enzyme molecule into which the substrate fits The shape of the key(substrate) must conform into the lock(enzyme)

    2. KochlandsINDUCED FIT THEORY

    It is based on the attachment of a substrate to the active site of an

    enzyme, which then causes conformational changes in the enzyme.

    This theory is more acceptable because the protein molecule is

    flexible enough to allow conformational changes and also allows

    some explanation on the influence of hormones on enzymatic

    activity.

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    TYPES OF REACTION ORDER:

    1. Zero Order Reaction

    The rate of reaction is linear with the time,

    independent of concentration of the substrate and

    directly proportional to enzyme concentration.

    2. First Order Reaction

    The rate of reaction is determined by the

    concentration of substrate as well as of enzymes(therate of reaction changes continuously with time as the

    substrate is consumed.

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    FACTORS AFFECTING ENZYME REACTIONS:

    1. Enzyme concentration

    in enzyme concentration,in rate of reaction

    2. Substrate concentration

    in substrate concentration, in rate of reaction Upon reaching maximal value of conc. of substrate, it does

    not result in increased rate of reaction.

    3. Temperature

    For every 10 C rise in temp, results to 2-3 times increase inthe rate of reaction

    37-40 Coptimum temperature for enzyme activity

    >40 C-proteins undergo denaturation and loses its

    functional ability

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    4. Hydrogen ion concentration or pH

    some enzymatic reactions proceed at their fastest rate at an

    optimum pH.

    Extreme pH causes denaturation of enzymes.

    Ex.

    Pepsin--- active at pH 2.0

    Alkaline phosphataseactive at pH 8.6-10

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    INHIBITORS:

    COMPETITIVEINHIBITOR

    Substances that compete with the substrate for enzyme binding

    because they are chemically analogous to the substrate and bind

    to the active sites of the enzyme.

    High substrate concentration will overcome the effect of theinhibitor.

    NON-COMPETITIVE INHIBITOR

    Substances that does not resemble the substrate and bind to the

    enzyme in areas other than the active site.

    They do not compete with the substrate.

    Increasing the substrate concentration will not overcome the

    inhibition.

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    Units in measuring enzyme

    activity International unit(IU)

    Amount of enzyme that catalyzes the conversion of

    1 micromole of substrate per minute under controlled condition

    Katal unit(KU)

    Amount of enzyme that catalyzes the conversion of 1 mole of

    substrate per second under controlled condition

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    Means in measuring enzyme

    activity A. change in coenzyme concentration

    B. Increase in product concentration

    C. Decrease in substrate concentration

    Called an inverse technique

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    Pitfall in enzyme assays

    Hemolysis causes falsely elevated values due to release ofenzymes from RBCs.

    Serum rather than plasma is preferred specimen.

    Anticoagulants have adverse effect on enzyme activity.

    Lactascent or milky serum causes variable absorpton by thespectrophotometer.

    Storage:

    Most enzymes are stable at 6 for at least 24 hours.

    For a longer period of time, temperature of -20 C or

    lower are used to ensure preservation of enzyme activity CK must be kept at -70 C to retain activity.

    For the LD4 and LD5, room temperature only, because it isinactivated at refrigerator temperature.

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    Principles of diagnostic serum

    enzymology CAUSES OF INCREASED SERUM ENZYME LEVELS:

    Impaired removal of enzymes from plasma.

    In pathologic conditions involving tissue necrosis and

    degeneration.

    Increased permeability of the cell membrane.

    Physiological or pathological increase in the number of cells or

    increase in the rate of production of cells.

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    CAUSES OF DECREASED ENZYME LEVELS:

    Increased removal of enzyme from the plasma.

    Decreased synthesis due to organ impairment, injury or removal.

    Malnutrition leading to decreased enzyme production.

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    oxidoreductases

    A. LDH

    E.C.: 1.1.1.27

    Recommended Name: Lactate dehydrogenase

    Systematic name: L-Lactate: NAD+ oxidoreductase

    Action:

    Conversion of lactic and pyruvic acid

    Hydrogen-transfer enzyme

    Coenzyme: NAD

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    EQUATION:

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    Tissue source:

    Heart, liver, skeletal muscle, kidney and RBCs

    Lungs, smooth muscles, brain

    Diagnostic Significance: Cardiac, hepatic, skeletal muscle, renal and hematologic dse.

    Highest level is seen in pernicious anemia and Hematologic

    disorders

    In AMI, LDH rise within 12-24 hrs

    peak within 48-72 hrs

    remains elevated for 10 days

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    Ldh isoenzymes

    ISOENZYME TISSUE DISORDERS:

    LDH-1

    (heat

    stable)

    HHHH 14-26% Heart

    RBC

    MI

    Hemolytic anemia

    LDH-2

    (heatstable)

    HHHM 29-39% Heart

    RBCRenal cortex

    Megaloblastic anemia

    Acute renal infarctionhemolysis

    LDH-3 HHM

    M

    20-26% Lung

    Lymphocytes

    SpleenPancreas

    Brain

    Embolism

    Pneumonia

    LymphocytosisPancreatitis

    CA

    LDH-4

    (heat labile)

    HMM

    M

    8-16% Liver Hepatic injury

    LDH-5

    (heat labile)

    MMM

    M

    6-16% Skeletal muscle Skeletal muscle injury

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    LDH-6 Alcohol dehydrogenase

    Increased in Arterosclerotic cardiovascular failure

    Elevated level signifies grave prognosis and impeding death

    Techniques in measuring LD isoenzymes: A. Physical

    Electrophoresis

    Selective absorption on Diethylaminoethyl cellulose(DEAE)Solvent precipitation technique

    Heat denaturation at 65 C for 30 mins

    B. Chemical Substrate-product relationship

    Coenzyme affinty

    Differential inhibition of LD activity C. Immunological test

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    Sources of error:

    Hemolysis

    Unstable serum

    Spx should be stored at 25 C and analyzed within 48 hrs

    LDH-5most labile

    Clinical Significance:

    LD levels are markedly increased in the ff:

    Megaoblastic anemia Pulmunary infarctionGranulocytic leukemia Hodgkins Dse

    Hemolytic anemia Infectious mnonucleosis

    Progressive Muscular Dystrophy(PMD)

    l h h

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    Glucose-6-phosphate

    dehydrogenase E.C.: 1.1.1.49

    Recommended name: Glucose-6-Phosphate Dehydrogenase

    Systematic name: D-glucose-6-phosphate: NADP+ 1-

    oxidoreductase

    Action: oxidation of glucose-6-phosphate to 6-

    phosphogluconate

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    Tissue Source:

    Adrenal cortex, spleen, thymus, lymph nodes, lactating

    mammary glands and RBCs

    Diagnostic Significance:

    RBC

    NADPH is converted into glutathione

    Glutathione

    Anti-oxidant

    protects hgb from oxidation

    Dec. G6PD=dec. NADPH=dec. Gluthathione

    Dec. Gluthathionemay cause hemolysis/damage to cell membrane

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    Decreased G6PD

    G6PD deficiency

    Inherited sex-linked trait

    May cause drug-induced hemolytic anemia/exposure to oxidizing

    substances

    Increased G6PD

    Myocardial Infarction and Megaloblastic anemias

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    Assays:

    Specimen used:

    Deficiency of enzymered cell hemolysate

    Elevation of enzyme levelserum

    Reference Range:

    10-15 u/g hgb

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    TRANSFERASE

    AST

    E.C.: 2.6.1.1

    Recommended name: Aspartate aminotransferase

    Systematic name: L-aspartate:2-oxaloglutarate

    aminotransferase

    Action:

    Transaminase-synthesis and degradation of amino acid

    Transfer of amino group between aspartate and a-ketoglutarate

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    Tissue source:

    Cardiac muscle, liver, skeletal muscle

    Kidney, pancreas, RBC

    Diagnostic Significance:

    Hepatocellular and Skeletal Dse.

    AMI

    AST rise at 6-8 hrs

    Peak at 24 hrs

    Return to normal within 5 days

    Decreased in

    pregnant women

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    Assays: Rietmann-Frankel Method

    Substrate: aspartic alpha ketoglurate

    Color developer: 2,4 dinitrophenyl hydrazine

    End Product: glutamic acid and oxaloacetic acid

    End color: brown

    Karmen Method

    Indicator: Malate dehydrogenase

    Absorbance: 340 nm

    pH: 7.3-7.8

    Babson and Read Method

    Color developer: diazonium salt

    End color: violet

    Source of error:

    Hemolysis Falsely increased results

    Alcohol lowers AST values

    Muscle trauma like intramuscular injectiions, exercise, or surgical operation can significantly increase ATS levels

    Reference Range: 5-30 u/L

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    ALT

    E.C.: 2.6.1.2

    Recommended name: Alanine aminotransferase

    Systematic name: L-alanine: pyruvate aminotransferase

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    Tissue source:

    Liver

    Liver-specific enzyme

    Diagnostic significxanc:

    Hepatic Disorders

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    Assay:

    Reitman and Frankel Method

    Substrate: alanine alpha ketoglutarate

    End Product: glutamate and pyruvic acid

    Walker method

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    Assay:

    Indicator: LDH

    Absorbance:340 nm

    pH: 7.3-7.8

    Source of error:

    Stable for 3-4 days at 4 C

    Reference

    range: 6-37 u/L

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    CK

    E.C.: 2.7.3.2

    Recommended name: Creatine kinase, creatinephosphokinase

    Systematic name: ATP: Creatine N-phosphotransferase

    Action:

    Associated with ATP regeneration in contractile and transportsystems

    Physiologic Function:

    Muscle cells, creatine phosphate

    Production of ATP

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    Ck isoenzymes

    ISOENZYME LOCATION

    CK-1 CK-BB(BRAIN) BRAIN, BLADDER, LUNG,

    PROSTATE, UTERUS,

    COLON, STOMACH,

    THYROID

    CK-2 CK-MB(HYBRID) CARDIAC, SKELETALMUSCLE

    CK-3 CK-MM(MUSCLE) CARDIAC, SKELETAL

    MUSCLE

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    CK-BB

    Highest concentrations in CNS, GI tract and uterus

    Elevated in px with CA

    Useful tumor-associated marker

    Increased in CNS damage, tumors, child-birth

    CK-MB

    Major isoenzyme found in striated muscle and normal serum

    Elevated in cardiac disorders

    In AMI, CK rise at 4-8 hours

    Peak in 12-24 hrs

    Return to normal within 48-72 hours

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    Macro-CK

    Midway between CK-MM and CK-MB

    CK-Mi(mitochondrial CK)

    muscle, brain, liver

    Assay:

    Electrophoresis

    Reference method used for measurement of isoenzymes

    Ion-exchange Chromatography

    Radio Immunoassay(RIA)

    Immuno-inhibition

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    GGT

    E.C.: 2.3.2.2

    Recommended name: Gamma-glutamyl transferase

    Systematic name: (5-glutamyl) peptide: amno acid-5-glutamyl

    transferase

    Action: transfer of gamma-glutamyl residue from gamma-glutamyl peptides to amino acid, H2O and other smallpeptides

    Involved in peptide and protein synthesis, regulation of tissuegluthathione levels and transport of amino acid across cellmembrane

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    Tissue source:

    Kidney, brain, prostate, pancreas and liver

    Diagnostic significance

    Liver

    Biliary ductules

    Hepatobiliary disorders

    Increased in patients taking drugs such as warfarin, phenobarbitaland phenytoin

    Alcoholism

    GGT assays:

    Useful in monitoring the effects of abstention from alcohol and areused by alcohol treatment centers

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    Assay:

    Substrate: gamma glutamyl-p-nitroanilide

    Absorbance: 405 to 420 nm

    Source of error:

    Stable for 1 week at 4 C

    Reference Range:

    Male: 6-45 u/L

    Female: 5-30 u/L

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    Optimum pH: 9.0-10.0 Activator: Mg 2+

    Tissue source:

    Intestines, liver, bone, spleen, placenta, kidney, RBC

    Diagnostic Significance:

    Increased in:

    Hepatobiliary and Bone disorders

    Obstructive conditions

    Pagets dse, Osteomalacia, Ricketts

    Pregnancy

    Decreased in:

    Hypophosphatasia

    Malnutrition

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    Considerations in ALP assays:

    Physiologically elevated in growing children and in pregnant

    women in the third trimester

    EDTA inactivates ALP owing to chelation of magnesium ions

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    Alp isoenzymes

    ISOENZYME

    LIVER FASTEST

    BONE HEAT LABILE

    PLACENTA HEAT STABLE

    INHIBITED BY PHENYLALANINE

    INTESTINES SLOWEST

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    Regan-Nagao Isoenzyme

    Carcino-placental ALP

    Detected in various CA(lung, breast, ovarian and colon)

    Assay:

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    Assays:

    A. Substrate: beta-glycerophosphate

    End Product: inorganic phosphate+glycerol

    1. Bodansky

    2. Shinowara3. Jones

    4. Reinhart

    B. Substrate: phenylphosphae

    End product: phenol

    1. King and Armstrong

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    C. Substrate: p-nitrophenyl phosphate

    Product: p- nitrphenol or yellow phenoxide ion

    1. Bessey, Lowry and Brock

    2. Bowers and Mc comb

    D. Substrate: phenolphthalein diphosphateProduct: phenolphthalein red

    1. Huggins and Talalay

    E. Substrate: alpha naphthol phosphate

    Product: alpha naphtol

    F. Substrate: Buffered phenolphthalein phosphate

    End product: free phenolphthalein

    1. Klein, Babson and Read

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    Klein, Babson and Read

    Substrate: Buffered phenolphthalein phosphate

    End product: free phenolphthalein

    Color developer: NaOH

    End color: pink

    Bessey, Lowry and Brock

    Substrate: p-nitrophenyl phosphate

    Product: p- nitrphenol or yellow phenoxide ionColor developer: 0.02 N NaOH

    End color: yellow

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    ACP

    E.C. : 3.1.3.2

    Recommended name: Acid phosphatase

    Systematic name:

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    Tissue source:

    Prostategland

    RBC, Platelet, liver, spleen, milk, bone marrow

    To differentiate Prostatic ACP and RBC ACP inhibitors areadded:

    L-tartrate ions; Prostatic ACP

    Formaldehyde and Cupric ions: RBC and Platelet ACP

    Total ACP-ACP after the addition of L-tartrate= Prostatic ACP

    Optimum pH: 4.9-5.0

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    Assays:

    Methods: Substrate End product

    1. Bodansky Beta-glycerophosphate Inorganic phosphate

    2. Gutman and Gutman Phenyl phosphate phenol

    3. Fishman and Lerner Phenyl phosphate phenol

    4. King Armstrong PNPP P-nitrophenol

    5. Shinowara PNPP

    6. Bessy, Lowry annd

    Brock

    PNPP

    7. Babson, Read and

    Phillips

    Alpha naphthyl

    phosphate

    Alpha-napthol

    8. Roy and Hillman Thymolphthalein

    monophosphate

    Free thymolphthalein

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    Roy and Hillman

    Thymolphthalein monohosphate

    Most specific substrate for ACP

    Color developer: Na OH- Na Carbonate solution

    End color: blue

    Babson, Read and Phillips

    Color developer: tetra azotized orthodianisidine

    End color: brown

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    Source of error:

    Serum ACP is higher than plasma ACP

    Hemolysis

    Diagnostic significance:

    Increased in:

    Metastatic prostate carcinoma

    A. moderate elevation of TOTAL ACP

    Female breast CA

    Pagets Dse

    Hyper parathyroidism

    B. Non-Prostatic ACP elevation

    Niemann-Picks dse

    Gauchersdse

    Myelocytic leukemia

    Also present in seminal fluid Used in forensic cases such as in rape

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    Reference range:

    Prostatic ACP

    0-35 IU/L

    Total ACP Male: 2.5-117 IU/L

    Female: 0.2-3.5 IU/L

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    AMS

    E.C. : 3.2.1.1

    Recommended name: a-amylase

    Systematic name: 1,4-D-glucan glcanohydrolase

    Action:

    Breakdown of starch and glycogen

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    2 isoenzymes:

    1. Salivary

    Ptyalin(fast)

    2. Pancreatic

    Amylopsin(slow)

    Starch/glycogen glucose, maltose, dextrins

    Activators:

    Ca2+

    Cl-

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    Tissue source:

    Pancreas, salivary glands

    Skeletal muscles, small intestine, fallopian tube

    Diagnostic Significance:

    Acute pancreatitis

    Levels reaches 4-6 times the normal value and normalizes

    within 3-4 days

    Mumps, perforated petic ulcers, appendicitis, ruptured ectopicpregnancy, dissecting aortic aneurysm, biliary tract disease

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    Assay for enzyme activity: Amyloclastic

    Decrease in substrate concentration/disappearance of starch

    Saccharogenic

    Amount of reducing sugars produced

    Chromogenic

    Measures increasing color from production of product coupled withchromogenic dye

    Continous monitoring

    Coupling of several enzyme system to monitor amylase activity

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    Reference Range:

    Serum:

    25-130IU/L

    Urine

    1-15 IU/L

    Considerations in AMS assays:

    Mouth pipetting is not done

    Lipemic specimens cause a reduction in amylase activity

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    LPS

    E.C. : 3.1.1.3

    Recommended name: Lipase

    Systematic name: Triacyl glycerol acylhydrolase

    Action:

    Hydrolisis of esters in the alpha-position to yield beta-

    monoglycerides and fatty acids

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    Tissue Source: Pancreas, stomach and small intestine

    Diagnostic Significance:

    Acute pancreatitis

    Assay for enzyme Activity:

    Cherry-Crandal

    Substrate: olive oil

    Indicator: phenolphthalein

    End color: pink

    Incubation period: 24 hrs

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    Tietz and Templaton Indicator: Thymolphthalein

    End coor: blue

    Incubation period: 4-6 hrs

    Source of error:

    Hemolysis

    Falsely decreased result

    Hgbacts as inhibitor for enzymatic activity

    Reference Range:

    0-1.0 IU/mL

    1.0-1.5 cherry-crandal unit

    l

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    lyases

    ALDOLASE

    E.C.: 4.1.2.13

    Recommended name: Fructose diphophate

    Systematic name: D-D-fructose-1, 6-bidiphosphate, D-

    glyceraldehyde phosphate lyase Action:

    Spitting of D-fructose di phosphate to D-glyceraldehyde

    phosphate and dihydroxy acetone phosphate

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    3 isoenzymes:

    A. Aldolase A- skeletal muscle

    B. Aldolase B- liver, kidney and WBC

    C. Aldolase C- brain

    Assay:

    Pinto, Kaplan and Van Dreal

    Sibley and Lehninger

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    Diagnostic Significance:

    Severe:

    Muscle degradation

    Viral hepatitis

    Moderate:

    Gangrene

    Megaloblastic anemia

    Granulocytic leukemia

    Metastatic liver CA

    Psychosis

    Trichinosis