cdha_hinf6210_datacleaning_v1.2_sept20_2011

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Data Cleaning Process in the project: Determination and visualization of family practice sizes and characteristics in Nova Scotia Conrad Ng Dr. Anatoliy Gruzd Dr. Calvino Cheng Intern Supervisor Site Supervisor 1. Intro 2. Background 3. Key Indexes 4. Cases 5. Summary 1 of 14

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Data Cleaning Process in the project: Determination and visualization of family practice sizes and characteristics in Nova Scotia Conrad Ng Dr. Anatoliy Gruzd Dr. Calvino Cheng Intern Supervisor Site Supervisor

1. Intro 2. Background 3. Key Indexes 4. Cases 5. Summary 1 of 14

1. Intro 2. Background 3. Key Indexes 4. Cases 5. Summary 2 of 14

Project: Determination and visualization of family practice sizes and characteristics in Nova Scotia

Purpose: To help better utilize laboratory resources Goals: 1) Determinate practice size of outpatient setting 2) Discover physicians and patient migration patterns 3) Benchmark for problematic cases a) Over usage b) Under usage

1. Intro 2. Background 3. Key Indexes 4. Cases 5. Summary 3 of 14

Descriptive Statistics (Before cleaning)

Patient count per

Physician Clinic

Mean 392.61 585.17

Standard Error 16.13 50.29

Median 122 162

Mode 1 1

Standard Deviation 501.11 1257.15

Range 2429 18434

Minimum 1 1

Maximum 2430 18435

Sum 378868 365731

Count 965 625

Rows 1007974

Columns 28

Physicians 966

Clinics 626

Patients 288963

No addresses 23

a) Physicians PMB Problem

b) Clinics Address Problem

c) Time Active Order Date √ - slight problem

d) Patients Patient Millennium ID √

e) Order Order ID √

1. Intro 2. Background 3. Key Indexes 4. Cases 5. Summary 4 of 14

Key Indexes

1. Intro 2. Background 3. Key Indexes 4. Cases (1/4) 5. Summary 5 of 14

PMB – Physician Registration Number PMB_i2

DR_NAME PMB PMB_i2

Cameron , Marianne C (FF Spring Garden) 90802 14653 Cameron , Marianne C (PRIM) 14653 14653 Cameron , Marianne C (Tacoma) 92526 14653 Cameron , Stewart Martin 7748 7748 Campbell , Donald MacLeod 4055 4055 Campbell , Genevieve Marie 6678 6678 Campbell , Glenn R (FF Dartmouth) 90808 11889 Campbell , Glenn R (FF Sackville) 90809 11889 Campbell , Glenn R (FF Spring Garden) 90807 11889 Campbell , Glenn R (PRIM) 11889 11889

Kinley , Cecil Edwin (Park West) 90926 90926 Kinley , Cecil Edwin, Jr (Parkland) 7453 7453

STREET_ADDR STREET_ADDR2 STREET_ADDR3

Rapha Medical Centre 50 Tacoma Dr

Suite 8 50 Tacoma Drive

Medicine in Motion 5-121 Illsley Avenue

Medicine in Motion 5-121 Ilsley Avenue

Tantallon Family Practice 5150 St. Margaret's Bay Road Suite 202

Scotia Square Medicine 5201 Duke Street Suite #0270

Scotia Square Medical 5201 Duke Street Suite 0270

Scotia Square Medical Clinic 5201 Duke Street Suite 0270

Sackville Medical Clinic PO Box 8-520 Sackville Dr

Family Practice Clinic PO Box 94

1. Intro 2. Background 3. Key Indexes 4. Cases (2/4) 5. Summary 6 of 14

Address

STREET_ADDR STREET_ADDR2 STREET_ADDR3

Rapha Medical Centre 50 Tacoma Dr

Suite 8 50 Tacoma Drive

Medicine in Motion 5-121 Illsley Avenue

Medicine in Motion 5-121 Ilsley Avenue

Tantallon Family Practice 5150 St. Margaret's Bay Road Suite 202

Scotia Square Medicine 5201 Duke Street Suite #0270

Scotia Square Medical 5201 Duke Street Suite 0270

Scotia Square Medical Clinic 5201 Duke Street Suite 0270

Sackville Medical Clinic PO Box 8-520 Sackville Dr

Family Practice Clinic PO Box 94

1. Intro 2. Background 3. Key Indexes 4. Cases (2/4) 5. Summary 7 of 14

Address

Name_ADDR1 Dept_ADDR2 St._ADDR3 PO_ADDR4 ADDR5 Rapha Medical Centre 50 Tacoma Dr. 50 Tacoma Dr. Suite 8 Medicine in Motion 121 Ilsley Ave. Suite 5 Medicine in Motion 121 Ilsley Ave. Suite 5

Tantallon Family Practice 5110 St Margarets Bay Rd. Suite 202

Scotia Square Medicine 5201 Duke St. Suite 270 Scotia Square Medical 5201 Duke St. Suite 270 Scotia Square Medical Clinic 5201 Duke St. Suite 270 Sackville Medical Clinic 520 Sackville Dr. PO Box 8 Family Practice Clinic PO Box 94

(3 Columns 5 Columns)

1. Intro 2. Background 3. Key Indexes 4. Cases (2/4) 5. Summary 8 of 14

Address

1. Intro 2. Background 3. Key Indexes 4. Cases (3/4) 5. Summary 9 of 14

Address

Name_ADDR1 St._ADDR3 ADDR5 Clinic_Type

5991 Spring Garden Rd. Suite 820 General

5991 Spring Garden Rd. Suite 850 General

Dr. Kevin Carbyn 5991 Spring Garden Rd. Suite 1040 General

Family Focus Medical Clinic 5991 Spring Garden Rd. Suite 101 Family Focus

50 Tacoma Dr. General

50 Tacoma Dr. Suite 8 General

Tacoma Family Medicine 58 Tacoma Dr. Suite 101 Walk-In

Tacoma Family Medicine 70 Tacoma Dr. Suite 101 Walk-In

B2V2JS B2V2J5 BOJ2L0 B0J2L0 BEH2Y9 B3H2Y9 Sample map it! 1) B3L2T2 2) BOL2T2

Postal Code

1. Intro 2. Background 3. Key Indexes 4. Cases (4/4) 5. Summary 10 of 14

gpsvisualizer.com

Descriptive Statistics (Before and After cleaning)

Before After

Rows 1007974 925680

Columns 28 37

Physicians 966 426

Clinics 626 198

Patients 288963 278689

No addresses 23 0

1. Intro 2. Background 3. Key Indexes 4. Cases 5. Summary 11 of 14

Descriptive Statistics (Before and After cleaning)

1. Intro 2. Background 3. Key Indexes 4. Cases 5. Summary 12 of 14

Physician Clinic

Before After Before After

Mean 392.61 814.15 585.17 1605.196

Standard Error 16.13 27.41 50.29 186.7024

Median 122 797 162 773

Mode 1 1 1 1

Standard Deviation 501.11 565.74 1257.15 2633.762

Range 2429 2604 18434 19354

Minimum 1 1 1 1

Maximum 2430 2605 18435 19355

Sum 378868 346830 365731 319434

Count 965 426 625 199(-2)*

*Recent adjustment to duplication

1. Intro 2. Background 3. Key Indexes 4. Cases 5. Summary 13 of 14

How did the errors occur?

• Data Entry Errors (100,000 new daily) Average 200 errors for health card numbers, 0.5% [according to Data integrity officer]

• Changes in address, names • Amalgamation of 6 different systems in the past • Need for compatibility with other systems [Presently 3]

• Need for greater authority control at input level (ex: Electronic Forms, index specialist)

• Index! or relationship to indexed data! • Automation • Increase data usage/digestion so it becomes comparable to

other counts

Summary

1. Intro 2. Background 3. Key Indexes 4. Cases 5. Summary 14 of 14

Questions? Comments?

Conrad Ng [email protected]