biological data visualization with gitools interactive … data visualization with gitools...
TRANSCRIPT
Biological Data Visualization with Gitools Interactive
Heatmaps
Slides adapted from Nuria Lopez-Bigas Barcelona
http://bg.upf.edu
Multidimensional Cancer Genomics data
Expression patterns
Somatic mutations
Epigenomic profiles
Structural aberrations
Copy number alterations
Clinical information
Patients cohort
Omics data Clinical data
Primary tumors
(Cancer) Genomic Projects
Multidimensional Cancer Genomics data
Bioinformatician
Cancer Researcher
Multidimensional Cancer Genomics data
Tools for biological data interpretation
- Effective visualization - Exploration (Interactivity)- Analysis possibilities
TOOL
Bioinformatician
Clinical data
Omics data
Tumor samples
Gitools Interactive heatmaps
CDKN2A
MDM2
TP53
MDM4
CDKN2A
MDM2
TP53
MDM4
Mutation CNA gain CNA loss
HighLow expression
Tumor samples
Gitools Interactive heatmaps