bioinformatics and comparative genome analyses course may 7 - 19, 2012 stazione zoologica anton...
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Bioinformatics and Comparative Genome Analyses Course
May 7 - 19, 2012
Stazione Zoologica Anton Dohrn, Naples, Italy
Course web page: http://www.pasteur.fr/~tekaia/BCGA2012.html
Organizers:
• Giuseppe D'Onofrio, Stazione Zoologica Anton Dohrn, Naples
• Fredj Tekaia, Institut Pasteur Paris, France.
EMBO Bioinformatics and Comparative Genome Analyses Course
Stazione Zoologica Anton Dohrn, Naples, Italy, May 7 - 19, 2012
EMBO Bioinformatics and Comparative Genome Analyses Course
Stazione Zoologica Anton Dohrn, Naples, Italy, May 7 - 19, 2012
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With support from:
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Thanks to the President of the Stazione Zoologica Anton Dohrn:
Professor Enrico Alleva
For hosting and supporting this course.
Acknowledgements
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We are grateful to all colleagues and administrative staff who devoted much of their time to efficiently help in setting this course.
They are all volunteers.
Acknowledgements
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EMBO:
Anne-Marie Glynn
Lynne Turnbull
Sharon Witzke
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• From the Institut Pasteur Paris (http://www.pasteur.fr)
-Gestion du BudgetMarie-Pierre Landete, Maryse Fichepain;
-SecretariatNirina Andriakoto;
-Service MissionsMurielle Dupuis;
Service PhotosJean-François Charles;….
• Edouard Yeramian, Institut Pasteur ParisFor his help in the evaluation of the applications
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• Tru Huynh, Institut Pasteur Paris
• Martin Krzywinski, Genome Sciences Centre Vancouver - Canada
• Cedric Notredame, Centre de Regulacio Genomica, Barcelona - Spain
• Inna Dubchak, Genomic Division Lawrence Berkeley National Laboratory Berkeley, CA - USA
• Kalliopi Trachana, Structural and Computational Biology - EMBL-Heidelberg - Germany
• Gary Benson, Boston University, Boston - USA
• Claudia Angelini, Consiglio Nazionale delle Ricerche, Naples - Italy
Invited colleagues
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• Roberto Tagliaferri, Dept. Maths and Informatics, Universita di Salerno, Italy
• Giuseppe D'Onofrio, Stazione Zoologica Anton Dohrn, Naples - Italy
• Remo Sanges, Stazione Zoologica Anton Dohrn, Naples - Italy
• Javier de Las Rivas, Bioinformatics & Functional Genomics, Salamanca - Spain
• Bernard Dujon, Institut Pasteur, Paris - France
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Computer Room
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Sitting Plan EMBO2012Students are assumed to complement each others in terms of
backgrounds
Santiago Castillo
Mexico, Biol Jinjie Duan, China, Bioinf
Beck Yv onne Germany, Math
Laura Kamenetzky Argentina, Bioinf
Faouzia Ajili Tunisia, Biol
Anna Muszewska Poland, Bioinf
Ana Sencilo, Lithuania, Biol
Tainá Raiol Brasil, Biol
Martin Dienstbier, Czech Republic, Biol
Elisa Pellegrino Italy, Biol
Lusy Handoko Indonesia, Biol
Jean-François Flot France, Biol
Dennis Lal Germany, Biol
Rute Fonseca Portugal, Bioinf
Libertini Emanuele Italy, Bioinf
Dimitris Polychronopoulos Greece, Bioinf
Rawat Vimal India, Bioinf
Arnau Sebé-Pedrós, Spain, Biol
Uciel Pablo Chorostecki Argentina, Bioinf
Emanuel Weitschek Italy, CompS
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Practical matters
• You should have your badge always visible;
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Goals of the course
• Create class atmosphere
• Generate interactivity
• You make the course
• Learn new ideas/Exchange ideas
• Establish new collaborations
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Lectures / Practical sessions
• Preparation is key
• Ask questions
• Make comments
• Concentration/application
• Develop critical analysis
We expect to have a lively and friendly course
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Lectures / Practical sessions
• The 8 Gb USB pen drive should be renamed EMBO2012 and used for
Bibliographic documents + course materials +…
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Oral Presentations
• 15 minutes each including discussion:
•SelfIntroduction:
-Your work environment (University, Lab,…
-Your background and projects;
Useful for further discussion with others
•Your presentation
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Personal• On time
• Full time presence
• Respectful of rules
• Solidarity
(mix backgrounds: help each others)
• No cell phones
• Ethical use of Internet
• No e-mail during the course.
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Personal
• Keep the place clean ;
• No water-coffee-tea cups in the computer room;
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Saturday May 19th
Course Evaluation
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Course evaluation• EMBO on-line evaluation Questionnaire to be completed carefully (Friday evening - Saturday morning):
http://www.conference-service.com/pc12-08/welcome.cgi
(Questionnaire is CONFIDENTIAL - evaluation is personal, no group evaluation)
You need your user_Id & passwd
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Course evaluationLocal/short paper version
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• During the last session (9-12 am, May 19th): you will present your personal course evaluation in 1/2 slides :
Indicate what you learned, your overall impression on the 2 weeks course.
Your self evaluation in terms of active participation to the course.
Course evaluation
9-12 am, Saturday, May 19th
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First name Family name
e-mail adress:
PHOTO
Institution full adress
EMBO Bioinformatics and Comparative Genome AnalysisStazione Zoologica Anton Dohrn, Naples, May 7- 19, 2012
Copy of your Self Introduction First slide
Complete and save this file as: Familyname_EMBO2012_Eval.ppt
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Indicate what you learned, your overall impression of the 2 weeks course,Your self-evaluation in terms of active participation during the course,…
EMBO Bioinformatics and Comparative Genome AnalysisStazione Zoologica Anton Dohrn, Naples, May 7- 19, 2012
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• The overall analysis of the paper questionnaire results will be presented.
• Presence is mandatory;
• Participation certificates will be distributed.
• Group picture will be distributed.
Course evaluation
9-12 am, Saturday, May 19th
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Pictures sharing
• We would like you to share your pictures with others.
• Some will be added to the course web page.
Have a nice stay in Naples
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Thanks
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Questions?