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BIOCHEMISTRY REVIEW Overview of Biomolecules Chapter 10 Nucleic Acids

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Page 1: BIOCHEMISTRY REVIEW Overview of Biomoleculesmed.fau.edu/students/md_m1_orientation/Chapter10.pdfDNA vs RNA DNA RNA deoxyribose ribose A, C, G, T A, C, G, U 103 –108 nucleotides 102

BIOCHEMISTRY REVIEW

Overview of Biomolecules

Chapter 10

Nucleic Acids

Page 2: BIOCHEMISTRY REVIEW Overview of Biomoleculesmed.fau.edu/students/md_m1_orientation/Chapter10.pdfDNA vs RNA DNA RNA deoxyribose ribose A, C, G, T A, C, G, U 103 –108 nucleotides 102

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Page 3: BIOCHEMISTRY REVIEW Overview of Biomoleculesmed.fau.edu/students/md_m1_orientation/Chapter10.pdfDNA vs RNA DNA RNA deoxyribose ribose A, C, G, T A, C, G, U 103 –108 nucleotides 102

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Page 4: BIOCHEMISTRY REVIEW Overview of Biomoleculesmed.fau.edu/students/md_m1_orientation/Chapter10.pdfDNA vs RNA DNA RNA deoxyribose ribose A, C, G, T A, C, G, U 103 –108 nucleotides 102

DNA vs RNA

DNA RNA

deoxyribose ribose

A, C, G, T A, C, G, U

103 – 108 nucleotides 102 – 104 nucleotides

nucleus cytoplasm

double-stranded single-stranded

one type/ 1-2 copies many types/ many copies

permanent temporary

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Page 5: BIOCHEMISTRY REVIEW Overview of Biomoleculesmed.fau.edu/students/md_m1_orientation/Chapter10.pdfDNA vs RNA DNA RNA deoxyribose ribose A, C, G, T A, C, G, U 103 –108 nucleotides 102

Are You Getting It??

____________________________________________________

____________________________________________________

Which properties are shared by DNA and RNA?

(multiple answers)

a) Both contain the same sugar.

b) Both contain the same purines.

c) Both contain the same pyrimidines.

d) Both are negatively charged in the cell.

e) Both contain phosphodiester bonds.

f) Both have a sugar-phosphate backbone.

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Page 6: BIOCHEMISTRY REVIEW Overview of Biomoleculesmed.fau.edu/students/md_m1_orientation/Chapter10.pdfDNA vs RNA DNA RNA deoxyribose ribose A, C, G, T A, C, G, U 103 –108 nucleotides 102

Are You Getting It??

____________________________________________________

______________________Answer________________________

Which properties are shared by DNA and RNA?

a) Both contain the same sugar.

b) Both contain the same purines.

c) Both contain the same pyrimidines.

d) Both are negatively charged in the cell.

e) Both contain phosphodiester bonds.

f) Both have a sugar-phosphate backbone.

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Page 7: BIOCHEMISTRY REVIEW Overview of Biomoleculesmed.fau.edu/students/md_m1_orientation/Chapter10.pdfDNA vs RNA DNA RNA deoxyribose ribose A, C, G, T A, C, G, U 103 –108 nucleotides 102

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Page 8: BIOCHEMISTRY REVIEW Overview of Biomoleculesmed.fau.edu/students/md_m1_orientation/Chapter10.pdfDNA vs RNA DNA RNA deoxyribose ribose A, C, G, T A, C, G, U 103 –108 nucleotides 102

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Page 9: BIOCHEMISTRY REVIEW Overview of Biomoleculesmed.fau.edu/students/md_m1_orientation/Chapter10.pdfDNA vs RNA DNA RNA deoxyribose ribose A, C, G, T A, C, G, U 103 –108 nucleotides 102

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Page 10: BIOCHEMISTRY REVIEW Overview of Biomoleculesmed.fau.edu/students/md_m1_orientation/Chapter10.pdfDNA vs RNA DNA RNA deoxyribose ribose A, C, G, T A, C, G, U 103 –108 nucleotides 102

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Page 11: BIOCHEMISTRY REVIEW Overview of Biomoleculesmed.fau.edu/students/md_m1_orientation/Chapter10.pdfDNA vs RNA DNA RNA deoxyribose ribose A, C, G, T A, C, G, U 103 –108 nucleotides 102

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Page 12: BIOCHEMISTRY REVIEW Overview of Biomoleculesmed.fau.edu/students/md_m1_orientation/Chapter10.pdfDNA vs RNA DNA RNA deoxyribose ribose A, C, G, T A, C, G, U 103 –108 nucleotides 102

Are You Getting It??

____________________________________________________

____________________________________________________

Which forces contribute to the stability of a double-helix?

(multiple answers)

a) H-bonds

b) N-glycosidic bonds

c) base-stacking

d) phosphodiester bonds

e) hydrophobic interactions

f) covalent bonds

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Page 13: BIOCHEMISTRY REVIEW Overview of Biomoleculesmed.fau.edu/students/md_m1_orientation/Chapter10.pdfDNA vs RNA DNA RNA deoxyribose ribose A, C, G, T A, C, G, U 103 –108 nucleotides 102

Are You Getting It??

____________________________________________________

_______________________Answer_______________________

Which forces contribute to the stability of a double-helix?

a) H-bonds

b) N-glycosidic bonds

c) base-stacking

d) phosphodiester bonds

e) hydrophobic interactions

f) covalent bonds

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Page 14: BIOCHEMISTRY REVIEW Overview of Biomoleculesmed.fau.edu/students/md_m1_orientation/Chapter10.pdfDNA vs RNA DNA RNA deoxyribose ribose A, C, G, T A, C, G, U 103 –108 nucleotides 102

Are You Getting It??

____________________________________________________

____________________________________________________

Which can occur when the DNA strand

5’AATTCCGGAATTCC3’ forms a double-helix?

(multiple answers)

a) The complementary strand is 5’TTAAGGCCTTAAGG3’.

b) The complementary strand is 5’GGAATTCCGGAATT3’.

c) A more stable helix is formed by 5’CCGGCCAATTGGCC3’.

d) A more stable helix is formed by 5’AATTAAGGAATTAA3’.

e) The helix can be either left-handed or right-handed.

f) The helix has both hydrophilic parts and hydrophobic parts.

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Page 15: BIOCHEMISTRY REVIEW Overview of Biomoleculesmed.fau.edu/students/md_m1_orientation/Chapter10.pdfDNA vs RNA DNA RNA deoxyribose ribose A, C, G, T A, C, G, U 103 –108 nucleotides 102

Are You Getting It??

____________________________________________________

_______________________Answer_______________________

Which of the following can occur when the DNA strand

5’AATTCCGGAATTCC3’ forms a double-helix?

a) The complementary strand is 5’TTAAGGCCTTAAGG3’.

b) The complementary strand is 5’GGAATTCCGGAATT3’.

c) A more stable helix is formed by 5’CCGGCCAATTGGCC3’.

d) A more stable helix is formed by 5’AATTAAGGAATTAA3’.

e) The helix can be either left-handed or right-handed.

f) The helix has both hydrophilic parts and hydrophobic parts.

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Page 16: BIOCHEMISTRY REVIEW Overview of Biomoleculesmed.fau.edu/students/md_m1_orientation/Chapter10.pdfDNA vs RNA DNA RNA deoxyribose ribose A, C, G, T A, C, G, U 103 –108 nucleotides 102

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Page 17: BIOCHEMISTRY REVIEW Overview of Biomoleculesmed.fau.edu/students/md_m1_orientation/Chapter10.pdfDNA vs RNA DNA RNA deoxyribose ribose A, C, G, T A, C, G, U 103 –108 nucleotides 102

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Page 18: BIOCHEMISTRY REVIEW Overview of Biomoleculesmed.fau.edu/students/md_m1_orientation/Chapter10.pdfDNA vs RNA DNA RNA deoxyribose ribose A, C, G, T A, C, G, U 103 –108 nucleotides 102

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Page 19: BIOCHEMISTRY REVIEW Overview of Biomoleculesmed.fau.edu/students/md_m1_orientation/Chapter10.pdfDNA vs RNA DNA RNA deoxyribose ribose A, C, G, T A, C, G, U 103 –108 nucleotides 102

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Page 20: BIOCHEMISTRY REVIEW Overview of Biomoleculesmed.fau.edu/students/md_m1_orientation/Chapter10.pdfDNA vs RNA DNA RNA deoxyribose ribose A, C, G, T A, C, G, U 103 –108 nucleotides 102

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Page 21: BIOCHEMISTRY REVIEW Overview of Biomoleculesmed.fau.edu/students/md_m1_orientation/Chapter10.pdfDNA vs RNA DNA RNA deoxyribose ribose A, C, G, T A, C, G, U 103 –108 nucleotides 102

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Page 22: BIOCHEMISTRY REVIEW Overview of Biomoleculesmed.fau.edu/students/md_m1_orientation/Chapter10.pdfDNA vs RNA DNA RNA deoxyribose ribose A, C, G, T A, C, G, U 103 –108 nucleotides 102

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Page 23: BIOCHEMISTRY REVIEW Overview of Biomoleculesmed.fau.edu/students/md_m1_orientation/Chapter10.pdfDNA vs RNA DNA RNA deoxyribose ribose A, C, G, T A, C, G, U 103 –108 nucleotides 102

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Page 24: BIOCHEMISTRY REVIEW Overview of Biomoleculesmed.fau.edu/students/md_m1_orientation/Chapter10.pdfDNA vs RNA DNA RNA deoxyribose ribose A, C, G, T A, C, G, U 103 –108 nucleotides 102

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Page 25: BIOCHEMISTRY REVIEW Overview of Biomoleculesmed.fau.edu/students/md_m1_orientation/Chapter10.pdfDNA vs RNA DNA RNA deoxyribose ribose A, C, G, T A, C, G, U 103 –108 nucleotides 102

Are You Getting It??

____________________________________________________

____________________________________________________

Which characteristics apply to:

B-DNA; A-DNA; Z-DNA; H-DNA; a cruciform?

a) The structure is a double-helix.

b) The structure is a right-handed helix.

c) The structure requires a palindrome.

d) The structure requires a specific sequence of

purines and pyrimidines.

e) The structure contains hydrogen-bonds.

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Page 26: BIOCHEMISTRY REVIEW Overview of Biomoleculesmed.fau.edu/students/md_m1_orientation/Chapter10.pdfDNA vs RNA DNA RNA deoxyribose ribose A, C, G, T A, C, G, U 103 –108 nucleotides 102

Are You Getting It??

____________________________________________________

______________________Answer________________________

Which characteristics apply to:

B-DNA; A-DNA; Z-DNA; H-DNA; a cruciform?

a) The structure is a double-helix. A, B, Z

b) The structure is a right-handed helix. A, B

c) The structure requires a palindrome. cruciform

d) The structure requires a specific sequence of

purines and pyrimidines. Z, H

e) The structure contains hydrogen-bonds. all

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Page 27: BIOCHEMISTRY REVIEW Overview of Biomoleculesmed.fau.edu/students/md_m1_orientation/Chapter10.pdfDNA vs RNA DNA RNA deoxyribose ribose A, C, G, T A, C, G, U 103 –108 nucleotides 102

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Page 28: BIOCHEMISTRY REVIEW Overview of Biomoleculesmed.fau.edu/students/md_m1_orientation/Chapter10.pdfDNA vs RNA DNA RNA deoxyribose ribose A, C, G, T A, C, G, U 103 –108 nucleotides 102

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Page 29: BIOCHEMISTRY REVIEW Overview of Biomoleculesmed.fau.edu/students/md_m1_orientation/Chapter10.pdfDNA vs RNA DNA RNA deoxyribose ribose A, C, G, T A, C, G, U 103 –108 nucleotides 102

Are You Getting It??

____________________________________________________

____________________________________________________

Which characteristics will be shared by all

DNA double-helices? (multiple answers)

a) They all have the same amount of adenine.

b) They all have a base composition where A=T.

c) They all have two strands with complementary sequences.

d) They all denature at the same temperature.

e) They all hybridize at high pH.

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Page 30: BIOCHEMISTRY REVIEW Overview of Biomoleculesmed.fau.edu/students/md_m1_orientation/Chapter10.pdfDNA vs RNA DNA RNA deoxyribose ribose A, C, G, T A, C, G, U 103 –108 nucleotides 102

Are You Getting It??

____________________________________________________

_______________________Answer_______________________

Which characteristics will be shared by all

DNA double-helices?

a) They all have the same amount of adenine.

b) They all have a base composition where A=T.

c) They all have two strands with complementary sequences.

d) They all denature at the same temperature.

e) They all hybridize at high pH.

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Page 31: BIOCHEMISTRY REVIEW Overview of Biomoleculesmed.fau.edu/students/md_m1_orientation/Chapter10.pdfDNA vs RNA DNA RNA deoxyribose ribose A, C, G, T A, C, G, U 103 –108 nucleotides 102

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Page 32: BIOCHEMISTRY REVIEW Overview of Biomoleculesmed.fau.edu/students/md_m1_orientation/Chapter10.pdfDNA vs RNA DNA RNA deoxyribose ribose A, C, G, T A, C, G, U 103 –108 nucleotides 102

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Page 33: BIOCHEMISTRY REVIEW Overview of Biomoleculesmed.fau.edu/students/md_m1_orientation/Chapter10.pdfDNA vs RNA DNA RNA deoxyribose ribose A, C, G, T A, C, G, U 103 –108 nucleotides 102

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Page 34: BIOCHEMISTRY REVIEW Overview of Biomoleculesmed.fau.edu/students/md_m1_orientation/Chapter10.pdfDNA vs RNA DNA RNA deoxyribose ribose A, C, G, T A, C, G, U 103 –108 nucleotides 102

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Page 35: BIOCHEMISTRY REVIEW Overview of Biomoleculesmed.fau.edu/students/md_m1_orientation/Chapter10.pdfDNA vs RNA DNA RNA deoxyribose ribose A, C, G, T A, C, G, U 103 –108 nucleotides 102

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Page 36: BIOCHEMISTRY REVIEW Overview of Biomoleculesmed.fau.edu/students/md_m1_orientation/Chapter10.pdfDNA vs RNA DNA RNA deoxyribose ribose A, C, G, T A, C, G, U 103 –108 nucleotides 102

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Page 37: BIOCHEMISTRY REVIEW Overview of Biomoleculesmed.fau.edu/students/md_m1_orientation/Chapter10.pdfDNA vs RNA DNA RNA deoxyribose ribose A, C, G, T A, C, G, U 103 –108 nucleotides 102

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Page 38: BIOCHEMISTRY REVIEW Overview of Biomoleculesmed.fau.edu/students/md_m1_orientation/Chapter10.pdfDNA vs RNA DNA RNA deoxyribose ribose A, C, G, T A, C, G, U 103 –108 nucleotides 102

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Page 39: BIOCHEMISTRY REVIEW Overview of Biomoleculesmed.fau.edu/students/md_m1_orientation/Chapter10.pdfDNA vs RNA DNA RNA deoxyribose ribose A, C, G, T A, C, G, U 103 –108 nucleotides 102

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Page 40: BIOCHEMISTRY REVIEW Overview of Biomoleculesmed.fau.edu/students/md_m1_orientation/Chapter10.pdfDNA vs RNA DNA RNA deoxyribose ribose A, C, G, T A, C, G, U 103 –108 nucleotides 102

Are You Getting It??

____________________________________________________

____________________________________________________

Which properties are expected of genetic material?

(multiple answers)

a) It is the same in all cells of an organism.

b) It is the same in all organisms.

c) It can control/transform the characteristics of an

organism.

d) It changes as an organism ages.

e) It is double-stranded DNA.

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Page 41: BIOCHEMISTRY REVIEW Overview of Biomoleculesmed.fau.edu/students/md_m1_orientation/Chapter10.pdfDNA vs RNA DNA RNA deoxyribose ribose A, C, G, T A, C, G, U 103 –108 nucleotides 102

Are You Getting It??

____________________________________________________

______________________Answer________________________

Which properties are expected of genetic material?

a) It is the same in all cells of an organism.

b) It is the same in all organisms.

c) It can control/transform the characteristics of an

organism.

d) It changes as an organism ages.

e) It is double-stranded DNA.

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Page 42: BIOCHEMISTRY REVIEW Overview of Biomoleculesmed.fau.edu/students/md_m1_orientation/Chapter10.pdfDNA vs RNA DNA RNA deoxyribose ribose A, C, G, T A, C, G, U 103 –108 nucleotides 102

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Page 43: BIOCHEMISTRY REVIEW Overview of Biomoleculesmed.fau.edu/students/md_m1_orientation/Chapter10.pdfDNA vs RNA DNA RNA deoxyribose ribose A, C, G, T A, C, G, U 103 –108 nucleotides 102

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Page 44: BIOCHEMISTRY REVIEW Overview of Biomoleculesmed.fau.edu/students/md_m1_orientation/Chapter10.pdfDNA vs RNA DNA RNA deoxyribose ribose A, C, G, T A, C, G, U 103 –108 nucleotides 102

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Page 45: BIOCHEMISTRY REVIEW Overview of Biomoleculesmed.fau.edu/students/md_m1_orientation/Chapter10.pdfDNA vs RNA DNA RNA deoxyribose ribose A, C, G, T A, C, G, U 103 –108 nucleotides 102

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Page 46: BIOCHEMISTRY REVIEW Overview of Biomoleculesmed.fau.edu/students/md_m1_orientation/Chapter10.pdfDNA vs RNA DNA RNA deoxyribose ribose A, C, G, T A, C, G, U 103 –108 nucleotides 102

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Page 47: BIOCHEMISTRY REVIEW Overview of Biomoleculesmed.fau.edu/students/md_m1_orientation/Chapter10.pdfDNA vs RNA DNA RNA deoxyribose ribose A, C, G, T A, C, G, U 103 –108 nucleotides 102

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Page 48: BIOCHEMISTRY REVIEW Overview of Biomoleculesmed.fau.edu/students/md_m1_orientation/Chapter10.pdfDNA vs RNA DNA RNA deoxyribose ribose A, C, G, T A, C, G, U 103 –108 nucleotides 102

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Page 49: BIOCHEMISTRY REVIEW Overview of Biomoleculesmed.fau.edu/students/md_m1_orientation/Chapter10.pdfDNA vs RNA DNA RNA deoxyribose ribose A, C, G, T A, C, G, U 103 –108 nucleotides 102

Are You Getting It??

____________________________________________________

____________________________________________________

Which properties can be characteristic of

viral genetic material or bacterial genetic material?

a) It is single-stranded.

b) It is circular.

c) It contains several million bases.

d) It is compacted.

e) It is found in the nucleus.

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Page 50: BIOCHEMISTRY REVIEW Overview of Biomoleculesmed.fau.edu/students/md_m1_orientation/Chapter10.pdfDNA vs RNA DNA RNA deoxyribose ribose A, C, G, T A, C, G, U 103 –108 nucleotides 102

Are You Getting It??

____________________________________________________

______________________Answer_______________________

Which properties can be characteristic of

viral genetic material or bacterial genetic material?

a) It is single-stranded. viral

b) It is circular. both

c) It contains several million bases. bacterial

d) It is compacted. both

e) It is found in the nucleus. bacterial

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Page 51: BIOCHEMISTRY REVIEW Overview of Biomoleculesmed.fau.edu/students/md_m1_orientation/Chapter10.pdfDNA vs RNA DNA RNA deoxyribose ribose A, C, G, T A, C, G, U 103 –108 nucleotides 102

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Page 52: BIOCHEMISTRY REVIEW Overview of Biomoleculesmed.fau.edu/students/md_m1_orientation/Chapter10.pdfDNA vs RNA DNA RNA deoxyribose ribose A, C, G, T A, C, G, U 103 –108 nucleotides 102

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Page 53: BIOCHEMISTRY REVIEW Overview of Biomoleculesmed.fau.edu/students/md_m1_orientation/Chapter10.pdfDNA vs RNA DNA RNA deoxyribose ribose A, C, G, T A, C, G, U 103 –108 nucleotides 102

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Page 54: BIOCHEMISTRY REVIEW Overview of Biomoleculesmed.fau.edu/students/md_m1_orientation/Chapter10.pdfDNA vs RNA DNA RNA deoxyribose ribose A, C, G, T A, C, G, U 103 –108 nucleotides 102

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Page 55: BIOCHEMISTRY REVIEW Overview of Biomoleculesmed.fau.edu/students/md_m1_orientation/Chapter10.pdfDNA vs RNA DNA RNA deoxyribose ribose A, C, G, T A, C, G, U 103 –108 nucleotides 102

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Page 56: BIOCHEMISTRY REVIEW Overview of Biomoleculesmed.fau.edu/students/md_m1_orientation/Chapter10.pdfDNA vs RNA DNA RNA deoxyribose ribose A, C, G, T A, C, G, U 103 –108 nucleotides 102

Are You Getting It??

____________________________________________________

____________________________________________________

Which properties are characteristic of eukaryotic genetic

material? (multiple answers)

a) It is contained in a single chromosome.

b) It is complexed with protein.

c) It is compacted about 10-fold.

d) Each nucleosome contains several histone proteins.

e) Each histone protein is negatively-charged.

f) Nucleosomes are arranged into a helix.

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Page 57: BIOCHEMISTRY REVIEW Overview of Biomoleculesmed.fau.edu/students/md_m1_orientation/Chapter10.pdfDNA vs RNA DNA RNA deoxyribose ribose A, C, G, T A, C, G, U 103 –108 nucleotides 102

Are You Getting It??

____________________________________________________

_______________________Answer_______________________

Which properties are characteristic of eukaryotic genetic

material?

a) It is contained in a single chromosome.

b) It is complexed with protein.

c) It is compacted about 10-fold.

d) Each nucleosome contains several histone proteins.

e) Each histone protein is negatively-charged.

f) Nucleosomes are arranged into a helix.

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