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New New Developments Developments in D in D isorders isorders of of Intracellular Intracellular Vitamin B Vitamin B 12 12 ( Cobalamin) Cobalamin) Metabolism Metabolism B. Fowler B. Fowler University Children's Hospital University Children's Hospital Basel, Switzerland Basel, Switzerland

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Page 1: B. Fowler University Children's Hospital Basel, Switzerland · The CblD defect of cellular Cbl metabolism one gene – three phenotypes • Original cblD 2 siblings with combined

New New DevelopmentsDevelopments in Din Disordersisorders of of IntracellularIntracellularVitamin BVitamin B1212 (Cobalamin)Cobalamin) MetabolismMetabolism

B. FowlerB. FowlerUniversity Children's Hospital University Children's Hospital Basel, Switzerland Basel, Switzerland

Page 2: B. Fowler University Children's Hospital Basel, Switzerland · The CblD defect of cellular Cbl metabolism one gene – three phenotypes • Original cblD 2 siblings with combined

Structure of Vitamin BStructure of Vitamin B1212 (Cobalamin, (Cobalamin, CblCbl))

Essential cofactor for 2 Essential cofactor for 2 EnzymesEnzymes

MethylMethylMethionine SynthaseMethionine SynthaseMethylMethyl--CblCbl

MethylmalonylMethylmalonyl CoACoA--MutaseMutaseAdenosylAdenosyl--CblCbl

AdenosylAdenosyl CoCo

Page 3: B. Fowler University Children's Hospital Basel, Switzerland · The CblD defect of cellular Cbl metabolism one gene – three phenotypes • Original cblD 2 siblings with combined

Foods rich in Vitamin BFoods rich in Vitamin B1212 (Cobalamin)(Cobalamin)

Daily requirement 3µg

Vitamin BVitamin B1212 requirement is lowest of requirement is lowest of all all vitaminsvitamins

Ist Ist metabolismmetabolism isis thethe mostmost complicatedcomplicated

Page 4: B. Fowler University Children's Hospital Basel, Switzerland · The CblD defect of cellular Cbl metabolism one gene – three phenotypes • Original cblD 2 siblings with combined

Gastrointestinal Gastrointestinal Absorption of Absorption of dietary Vitdietary Vit--BB1212

CblCbl = Cobalamin= Cobalamin

HC = HC = HaptocorrinHaptocorrin--boundbound CblCbl

deg.HC = deg.HC = degradeddegraded HCHC

IF = Intrinsic IF = Intrinsic FaFacctortor

IFIF--CblCbl = IF= IF--boundbound CblCbl

--IFIF--CblCbl = IF= IF--CblCblattachedattached toto CubilinCubilin((IlealIleal recreceptoreptor))

TCIITCII--CblCbl = Transcobalamin = Transcobalamin boundbound CblCbl..

Haptocorrin def.

Cubilin / Amnionless def.

Intrinsic Factor def.

Transcobalamin def.

Page 5: B. Fowler University Children's Hospital Basel, Switzerland · The CblD defect of cellular Cbl metabolism one gene – three phenotypes • Original cblD 2 siblings with combined

MethionineMethionineSS--adenosyladenosylmethioninemethionine

SS--adenosyladenosylhomocysteinehomocysteine

CystathionineCystathionine

CysteineCysteine

SulphateSulphate

SerineSerine

TetrahydrofolateTetrahydrofolate

55--MethylMethyl--THFTHF

MSMS

MeCblMeCbl

AdenosineAdenosine

CobalaminCobalamin

AdoCblAdoCbl

Vitamin BVitamin B1212 and Homocysteine Metabolismand Homocysteine Metabolism

HomocysteineHomocysteine

Page 6: B. Fowler University Children's Hospital Basel, Switzerland · The CblD defect of cellular Cbl metabolism one gene – three phenotypes • Original cblD 2 siblings with combined

SuccinateSuccinate

FumarateFumarate

MalateMalate

OxaloacetateOxaloacetateCitrateCitrate

IsocitrateIsocitrate

αα--KetoglutarateKetoglutarate

SuccinylSuccinyl--CoACoA

AcetylAcetyl--CoACoA

PyruvatePyruvate LactateLactate

LL--MethylmalonyMethylmalony--CoACoADD--MethylmalonylMethylmalonyl--CoACoA

free Methylmalonic Acidfree Methylmalonic Acid

Mutase

PropionylPropionyl--CoACoA

ValineValineIsoleucineIsoleucineMethionineMethionineThreonineThreonine

OddOdd--chain fatty acidschain fatty acidsCholesterolCholesterol

AdoCbl

Epimerase

Succinate-CoALigase ATPATP

GDP GTP

CobalaminCobalamin

ADPADP

Methylmalonic acid metabolismMethylmalonic acid metabolism

Page 7: B. Fowler University Children's Hospital Basel, Switzerland · The CblD defect of cellular Cbl metabolism one gene – three phenotypes • Original cblD 2 siblings with combined

OHCbl

Cytoplasm

MeCbl

Homocysteine

Methionine

Cbl

Methylmalonyl-CoA Succinyl-CoAAdoCbl

Mitochondrion

Cbl

Cbl

OHCbl

TC

OHCblTC

Lysosome

Intracellular Cobalamin Metabolism: 2002Intracellular Cobalamin Metabolism: 2002

MethylmalonylMethylmalonyl CoACoA--MutaseMutase

Methionine Methionine SynthaseSynthase

TC, Transcobalamin

Methionine Methionine SynthaseSynthaseReductaseReductase

Page 8: B. Fowler University Children's Hospital Basel, Switzerland · The CblD defect of cellular Cbl metabolism one gene – three phenotypes • Original cblD 2 siblings with combined

OHCbl

Cytoplasm

MeCbl

Homocysteine

Methionine

Cbl

Methylmalonyl-CoA Succinyl-CoAAdoCbl

Mitochondrion

Cbl

Cbl

OHCbl

TC

OHCblTC

Lysosome

Intracellular Cobalamin Metabolism: 2002Intracellular Cobalamin Metabolism: 2002complementation groupscomplementation groups

cblCcblCcblFcblFcblGcblG

cblEcblE

cblBcblB

cblAcblA

cblDcblD

Page 9: B. Fowler University Children's Hospital Basel, Switzerland · The CblD defect of cellular Cbl metabolism one gene – three phenotypes • Original cblD 2 siblings with combined

CblC defect: early clinical presentationCblC defect: early clinical presentation

3.5 w.3.5 w. FeedingFeeding problemsproblemstemperaturetemperature dysregulationdysregulationPale, Pale, irritableirritable, , unconsciousunconscious, , dystrophicdystrophicpoorpoor growthgrowthneurologicalneurological abnormalitiesabnormalities, , tachycardiatachycardiaanaemiaanaemia

Prof. Prof. SengersSengers, Nijmegen, Nijmegen

PlasmaPlasma HcyHcy Methionine Methionine UrineUrine Methylmalonic Methylmalonic acidacidTreatedTreated OHOH--CblCbl i.m 1mg/d. i.m 1mg/d. betaine, betaine, carnitinecarnitine

4 4 monthsmonths rere--admittedadmitted to to hospitalhospitaldieddied oneone day day laterlater -- multimulti--organorgan failurefailure//hyperthermiahyperthermia

Page 10: B. Fowler University Children's Hospital Basel, Switzerland · The CblD defect of cellular Cbl metabolism one gene – three phenotypes • Original cblD 2 siblings with combined

CblC defect, late Clinical presentationCblC defect, late Clinical presentation

ClinicalClinical12y12y-- 21y.21y.

UnsteadyUnsteady gaitgait, , urinaryurinary incontinenceincontinenceSpinal Spinal cordcord involvementinvolvement, , neuropathyneuropathyinabilityinability to walkto walkrespiratoryrespiratory insufficiencyinsufficiency ((respiratorrespirator))ThoughtThought to to havehave multiple multiple sclerosissclerosis:: SteroidSteroid treatmenttreatment

Gold et al. 1995Gold et al. 1995

LaboratoryLaboratoryUrine MMA Urine MMA Plasma total homocysteine Plasma total homocysteine

TreatedTreated i.m. i.m. OHOH--CblCbl 500500µµg / d. g / d. -- 10mg /10mg /weekweek

Page 11: B. Fowler University Children's Hospital Basel, Switzerland · The CblD defect of cellular Cbl metabolism one gene – three phenotypes • Original cblD 2 siblings with combined

The CblC defect of cellular cobalamin The CblC defect of cellular cobalamin metabolismmetabolism

NATURE GENETICS 38 I NUMBER1 I JANUARY 2006 93NATURE GENETICS 38 I NUMBER1 I JANUARY 2006 93--100100

•• Discovered by homozygosity mappingDiscovered by homozygosity mapping

•• Located on chromosome 1pLocated on chromosome 1p

•• Codes for ca. 30 kDa protein Codes for ca. 30 kDa protein

Page 12: B. Fowler University Children's Hospital Basel, Switzerland · The CblD defect of cellular Cbl metabolism one gene – three phenotypes • Original cblD 2 siblings with combined

The cblC geneThe cblC gene

•• In 204 individuals, 42 different mutations In 204 individuals, 42 different mutations •• One mutation, 271dupA, accounted for 40% of all disease One mutation, 271dupA, accounted for 40% of all disease

alleles.alleles.•• In further 118 individuals, 11 additional mutations In further 118 individuals, 11 additional mutations

42% 271dupA 42% 271dupA (Lerner(Lerner--EllisEllis……Fowler:HumFowler:Hum Mutation 2009)Mutation 2009)

cblC genotype / phenotype correlationscblC genotype / phenotype correlations

EarlyEarly--onset diseaseonset diseasec.271dupA c.271dupA c.331C>T c.331C>T

LateLate--onset diseaseonset diseasec.394C>T (stop codon)c.394C>T (stop codon)

Page 13: B. Fowler University Children's Hospital Basel, Switzerland · The CblD defect of cellular Cbl metabolism one gene – three phenotypes • Original cblD 2 siblings with combined

Function of the cblC proteinFunction of the cblC protein

•• Similar motifs to those seen in bacterial genes with cobalaminSimilar motifs to those seen in bacterial genes with cobalamin--related related functions e.g. functions e.g. TonBTonB

•• TonBTonB is involved in is involved in transducingtransducing energy generated from the proton energy generated from the proton motive force to the transport of iron and cobalamin across the omotive force to the transport of iron and cobalamin across the outer uter bacterial membranebacterial membrane

•• Recombinant MMACHC binds cobalamin and functions Recombinant MMACHC binds cobalamin and functions in vitro in vitro as a as a CNCblCNCbl decyanasedecyanase (Kim et al. 2008)(Kim et al. 2008)

•• Exact function of MMACHC remains to be provedExact function of MMACHC remains to be provedEvidence suggests MMACHC is an intracellular cobalamin traffickiEvidence suggests MMACHC is an intracellular cobalamin trafficking ng chaperone that delivers cobalamin to and from other cobalamin rechaperone that delivers cobalamin to and from other cobalamin related lated proteins.proteins.

MMACHC homology model (red) and the three-dimensional NMR structure of the monomeric C-terminal domain of TonB (blue).

Page 14: B. Fowler University Children's Hospital Basel, Switzerland · The CblD defect of cellular Cbl metabolism one gene – three phenotypes • Original cblD 2 siblings with combined

The CblD DefectThe CblD Defect

The cblD complementation groupThe cblD complementation group(Willard et al. 1978, Am. J. Hum. Genet.)(Willard et al. 1978, Am. J. Hum. Genet.)

Originally Assigned to two siblings with homocystinuria / Originally Assigned to two siblings with homocystinuria / MMAuriaMMAuria (Goodman et al. 1970, (Goodman et al. 1970, BiochemBiochem. Med.). Med.)

Fibroblasts studiesuptake of Cblsynthesis of AdoCbl and MeCblMMCoAMMCoA--mutase and Methionine synthase activitymutase and Methionine synthase activity

BUT less severe than those in cblC defect

Page 15: B. Fowler University Children's Hospital Basel, Switzerland · The CblD defect of cellular Cbl metabolism one gene – three phenotypes • Original cblD 2 siblings with combined

The CblD defect of cellular Cbl metabolismThe CblD defect of cellular Cbl metabolismone gene one gene –– three phenotypesthree phenotypes

•• Original cblDOriginal cblD2 siblings with combined defect methylmalonic2 siblings with combined defect methylmalonic--aciduria (MMA) and homocystinuria (aciduria (MMA) and homocystinuria (HcyHcy))

•• Our study Our study (2004, Suormala, Coelho, Fowler et al. J B Chem:279: 42742)(2004, Suormala, Coelho, Fowler et al. J B Chem:279: 42742)-- 2 patients with isolated 2 patients with isolated HcyHcy -- normal MMAnormal MMA-- 1 patient with isolated MMA 1 patient with isolated MMA ––normal normal HcyHcyComplementation studies proved that these patients Complementation studies proved that these patients belong to the cblD complementation group = genebelong to the cblD complementation group = gene

•• Now 13 patients known Now 13 patients known 4 combined defect (2 described 1980, 2 new ones) 4 combined defect (2 described 1980, 2 new ones) 4 isolated homocystinuria, 4 isolated homocystinuria, 5 isolated Methylmalonic 5 isolated Methylmalonic acidaemiaacidaemia

Page 16: B. Fowler University Children's Hospital Basel, Switzerland · The CblD defect of cellular Cbl metabolism one gene – three phenotypes • Original cblD 2 siblings with combined

OHCbl

Cytoplasm

MeCbl

Homocysteine

Methionine

Cbl

Methylmalonyl-CoA Succinyl-CoAAdoCbl

Mitochondrion

Cbl

Cbl

OHCbl

TC

OHCblTC

Lysosome

Intracellular Cobalamin MetabolismIntracellular Cobalamin Metabolism

cblCcblCcblFcblFcblGcblG

cblEcblE

cblBcblB

cblAcblA

cblDcblDVar.1Var.1Var.2Var.2CblCbl

Page 17: B. Fowler University Children's Hospital Basel, Switzerland · The CblD defect of cellular Cbl metabolism one gene – three phenotypes • Original cblD 2 siblings with combined

CblDCblD--MMAMMA//HCHC4 4 patientspatients

CblDCblD--HCHC4 4 patientspatients

CblDCblD--MMAMMA5 5 patientspatients

PlasmaPlasma

HcyHcyMethionine Methionine

HcyHcyMethionine Methionine

HcyHcy normal normal Methionine normal Methionine normal

Clinical Clinical findingsfindings

DevelopmentDevelopment delaydelaySeizuresSeizuresHypotoniaHypotoniaLethargyLethargyFeedingFeeding difficultiesdifficultiesMegaloblasticMegaloblastic anemiaanemia

DevelopmentDevelopment delaydelayAtaxiaAtaxiaAbsent Absent ankleankle reflexreflexMegaloblasticMegaloblastic anemiaanemia

RespiratoryRespiratory distressdistressCranialCranial haemorrhagehaemorrhageSeizuresSeizuresEEG abnormalEEG abnormal

UrineUrine

MMA MMA

MMA normal MMA normal

MMA MMA

Classification of cblD patientsClassification of cblD patients

Page 18: B. Fowler University Children's Hospital Basel, Switzerland · The CblD defect of cellular Cbl metabolism one gene – three phenotypes • Original cblD 2 siblings with combined

Identification of the chromosomeIdentification of the chromosomeMicrocell Mediated Chromosome Transfer (MMCT)Microcell Mediated Chromosome Transfer (MMCT)

Chromosomal regionChromosomal regionPolymorphic markers analysisPolymorphic markers analysis

Candidate geneCandidate geneHomology search with bacterial proteinsHomology search with bacterial proteins

SearchSearch forfor thethe cblD cblD genegene

Page 19: B. Fowler University Children's Hospital Basel, Switzerland · The CblD defect of cellular Cbl metabolism one gene – three phenotypes • Original cblD 2 siblings with combined

10.2 Mb chromosomal interval 10.2 Mb chromosomal interval (2006 29 Mb)(2006 29 Mb)

containing 28 genes containing 28 genes (2006 168, 2 candidates (2006 168, 2 candidates studied)studied)

8 uncharacterized genes8 uncharacterized genes

cMcM MarkersMarkers SizeSize HET (%)HET (%)154,4154,4 150150 218218--242242 8383154,4154,4 22862286 218218--264264 7070154,4154,4 23342334 259259--273273 7777154,6154,6 349349 129129--135135 4747154,8154,8 129129 162162--180180 7777155,9155,9 132132 189189--213213 7676156,4156,4 381381 298298--312312 6060156,4156,4 22702270 209209--221221 5656156,4156,4 151151 211211--229229 8080156,9156,9 23352335 153153--173173 7676157157 23012301 108108--135135 7373

158,6158,6 22772277 245245--259259 5858158,6158,6 23242324 130130--156156 7171

Mapping analysis of chromosome 2Mapping analysis of chromosome 2

Page 20: B. Fowler University Children's Hospital Basel, Switzerland · The CblD defect of cellular Cbl metabolism one gene – three phenotypes • Original cblD 2 siblings with combined

144 144 MbMb 152 152 MbMb151 151 MbMb148 148 MbMb 149 149 MbMb146 146 MbMb 147 147 MbMb145 145 MbMb

TelomereTelomereCentromereCentromere

153 153 MbMb

MMADHCMMADHC

M13

2M

132

M15

1M

151

M23

35M

2335

M23

24M

2324

150 150 MbMb

M22

75M

2275

M23

01M

2301

M22

36M

2236

M23

13M

2313

M21

84M

2184

Chromosomal location of the candidate geneChromosomal location of the candidate gene

Significant homology with bacterial genes related to ABC transpSignificant homology with bacterial genes related to ABC transportersortersEncodes a polypeptide of 296 Encodes a polypeptide of 296 aminoacidsaminoacids (32.8 kDa)(32.8 kDa)Mutations were found in all cblD patientsMutations were found in all cblD patients

→→ MMethylethylMMalonicalonic AAciduria and ciduria and HHomoomoCCystinuriaystinuria cblcblDD type (type (MMADHCMMADHC))Maps to chromosome 2q23.2Maps to chromosome 2q23.2

Page 21: B. Fowler University Children's Hospital Basel, Switzerland · The CblD defect of cellular Cbl metabolism one gene – three phenotypes • Original cblD 2 siblings with combined

Transfection of Transfection of combined defectcombined defect fibroblasts fibroblasts with wild type and mutant with wild type and mutant MMADHCMMADHC

00

55

1010

1515

2020

2525

3030

3535

4040

4545

5050

vectorvector wild wild typetype 545C>A545C>A 746A>G746A>G 776T>C776T>C 5757--64del64del

Met

hylc

obal

amin

(% o

f tot

al)

Met

hylc

obal

amin

(% o

f tot

al)

cblDcblD--MMAMMAcblD cblD --HcyHcy

Page 22: B. Fowler University Children's Hospital Basel, Switzerland · The CblD defect of cellular Cbl metabolism one gene – three phenotypes • Original cblD 2 siblings with combined

SpliceSplice sitesite deletiondeletion MissenseMissense

FrameshiftFrameshift/Stop codon/Stop codon

InframeInframe duplicationduplication

NonsenseNonsense

MMADHCMMADHC mutationsmutationscblDcblD--MMAMMA/HC/HC

cblDcblD--HCHCcblDcblD--MMAMMA

22 33 44 55 66 77 88

F204

_A23

2del

F204

_A23

2del

R25

0XR

250X

C19

fsX2

0C

19fs

X20

R54

XR

54X

L103

_S10

8dup

L103

_S10

8dup

Y140

XY1

40X

L20f

sX22

L20f

sX22

T182

NT1

82N

Y249

WY2

49W

L259

PL2

59P

S228

XS2

28X

T152

fsX1

62T1

52fs

X162

D24

6GD

246G

Page 23: B. Fowler University Children's Hospital Basel, Switzerland · The CblD defect of cellular Cbl metabolism one gene – three phenotypes • Original cblD 2 siblings with combined

MMADHCMMADHC mutations in cblDmutations in cblD--MMAMMA

cblDcblD--MMAMMA

22 33 44 55 66 77 88

C19

fsX2

0C

19fs

X20

R54

XR

54X

L20f

sX21

L20f

sX21

Start Start codoncodon

Start Start codoncodon

Page 24: B. Fowler University Children's Hospital Basel, Switzerland · The CblD defect of cellular Cbl metabolism one gene – three phenotypes • Original cblD 2 siblings with combined

Possible function ofPossible function of thethe cblD ProteincblD Protein

Protein sequence Protein sequence highly conservedhighly conserved in mammalian speciesin mammalian species

MMADHCMMADHC not member of previously identified gene familynot member of previously identified gene family

Shares similarity with putative Shares similarity with putative ATPaseATPase component of component of bacterial ABC transporterbacterial ABC transporter

Lacks critical domains Lacks critical domains of mostof most ABC transportersABC transporters

Possible mitochondrial leader sequencePossible mitochondrial leader sequence

Vitamin Vitamin BB1212 binding motifbinding motif DxHxxGDxHxxG

MMADHC

Mitochondrial Mitochondrial sequencesequence

B12 B12 bindingbinding

Page 25: B. Fowler University Children's Hospital Basel, Switzerland · The CblD defect of cellular Cbl metabolism one gene – three phenotypes • Original cblD 2 siblings with combined

22 33 44 55 66 77 88

Start Start codoncodon

MetMet6262

MetMet116116 292292

mitochondrialmitochondrialtargetingtargeting adenosyladenosyl--cblcbl synthesissynthesis

methylmethyl--CblCbl synthesissynthesis

GlnGln118118

Identification of AdoCbl and MeCbl functional Identification of AdoCbl and MeCbl functional domainsdomains

Page 26: B. Fowler University Children's Hospital Basel, Switzerland · The CblD defect of cellular Cbl metabolism one gene – three phenotypes • Original cblD 2 siblings with combined

cblF defectcblF defectClinical Presentation (Clinical Presentation (FernandesFernandes book, 2006)book, 2006)

•• Seven of eight presented in the first year of life. (now 14 Seven of eight presented in the first year of life. (now 14 patients known)patients known)

•• MegaloblasticMegaloblastic anemia, anemia, neutropenianeutropenia and thrombocytopenia. and thrombocytopenia. •• Failure to thrive, recurrent infections, developmental delay, Failure to thrive, recurrent infections, developmental delay,

lethargy, lethargy, hypotoniahypotonia, aspiration pneumonia, , aspiration pneumonia, hepatomegalyhepatomegaly and and encephalopathy, encephalopathy, pancytopeniapancytopenia, and heart anomalies., and heart anomalies.

•• Original infant girl had Original infant girl had glossitisglossitis and and stomatitisstomatitis in first week of in first week of life. life. -- severe feeding difficulties requiring tube feeding. severe feeding difficulties requiring tube feeding. -- Tooth abnormalities and Tooth abnormalities and dextrocardiadextrocardia were present.were present.

•• One infant died suddenly at home in the first year of life.One infant died suddenly at home in the first year of life.•• One boy developed juvenile rheumatoid arthritis at the age of 4 One boy developed juvenile rheumatoid arthritis at the age of 4

years and a pigmented skin abnormality at 10 years.years and a pigmented skin abnormality at 10 years.

Page 27: B. Fowler University Children's Hospital Basel, Switzerland · The CblD defect of cellular Cbl metabolism one gene – three phenotypes • Original cblD 2 siblings with combined

Metabolic DerangementMetabolic Derangement•• Failure of Failure of CblCbl transport across the lysosomal membrane transport across the lysosomal membrane

following degradation of TC in the following degradation of TC in the lysosomelysosome..•• No conversion of No conversion of CblCbl to either AdoCbl or MeCbl. to either AdoCbl or MeCbl. •• Abnormal Schilling test Abnormal Schilling test suggestssuggests IFIF--CblCbl has to pass through has to pass through

a lysosomal stage in the a lysosomal stage in the enterocyteenterocyte before before CblCbl is released is released into the portal circulation.into the portal circulation.

GeneticsGenetics•• AutosomalAutosomal recessive. recessive. •• The gene responsible for cblF has not been identifiedThe gene responsible for cblF has not been identifiedTreatmentTreatmentParenteralParenteral OHCblOHCbl, 1mg/day, (first daily and then biweekly, , 1mg/day, (first daily and then biweekly,

or even less frequently) seems to be effective in or even less frequently) seems to be effective in correcting the metabolic and clinical findings.correcting the metabolic and clinical findings.

cblF defectcblF defect

Page 28: B. Fowler University Children's Hospital Basel, Switzerland · The CblD defect of cellular Cbl metabolism one gene – three phenotypes • Original cblD 2 siblings with combined

PlasmaPlasma HcyHcy Methionine Methionine cobalamin cobalamin / Normal/ Normal

UrineUrine Methylmalonic Methylmalonic acidacidSchilling test abnormalSchilling test abnormal

Precise diagnosis requires tests in cultured fibroblastsPrecise diagnosis requires tests in cultured fibroblasts. . -- Incorporation of [14C] propionate into macromolecules Incorporation of [14C] propionate into macromolecules -- screen for screen for

integrity of methylmalonylintegrity of methylmalonyl--CoA mutase activity CoA mutase activity -- Conversion of [14C] labeled Conversion of [14C] labeled formateformate to methionine reliably measures to methionine reliably measures

methionine synthase function methionine synthase function -- Total incorporation of [57Co] Total incorporation of [57Co] CNCblCNCbl and conversion to both MeCbl and and conversion to both MeCbl and

AdoCbl, can differentiate AdoCbl, can differentiate CblCbl disorders.disorders.

In In cblFcblF patients, total incorporation of labeled patients, total incorporation of labeled CNCblCNCbl elevated, but elevated, but CNCblCNCblnot converted to AdoCbl or MeCbl. not converted to AdoCbl or MeCbl.

cblF defect: cblF defect: Diagnostic TestsDiagnostic Tests

Page 29: B. Fowler University Children's Hospital Basel, Switzerland · The CblD defect of cellular Cbl metabolism one gene – three phenotypes • Original cblD 2 siblings with combined

2009: 41;2342009: 41;234

Homozygosity mappingHomozygosity mapping

Page 30: B. Fowler University Children's Hospital Basel, Switzerland · The CblD defect of cellular Cbl metabolism one gene – three phenotypes • Original cblD 2 siblings with combined

MultiMulti--point linkage analysis of the genomepoint linkage analysis of the genome--wide scan wide scan using the using the AffymetrixAffymetrix GeneChipGeneChip®® Human Mapping 250K Human Mapping 250K Sty ArraySty Array..

6

Page 31: B. Fowler University Children's Hospital Basel, Switzerland · The CblD defect of cellular Cbl metabolism one gene – three phenotypes • Original cblD 2 siblings with combined

Fine polymorphic mapping and Fine polymorphic mapping and haplotypehaplotype analysis reveals analysis reveals LMBRD1 as candidate geneLMBRD1 as candidate gene

LMBRD1LMBRD1

Page 32: B. Fowler University Children's Hospital Basel, Switzerland · The CblD defect of cellular Cbl metabolism one gene – three phenotypes • Original cblD 2 siblings with combined

Localisation of transiently expressed LMBD1Localisation of transiently expressed LMBD1--EGFP with the EGFP with the lysosomal marker LAMP1lysosomal marker LAMP1

Page 33: B. Fowler University Children's Hospital Basel, Switzerland · The CblD defect of cellular Cbl metabolism one gene – three phenotypes • Original cblD 2 siblings with combined

•• Mutations in the LMBRD1 geneMutations in the LMBRD1 gene (encoding LMBD1, a (encoding LMBD1, a lysosomal membrane protein) lysosomal membrane protein) found in cblF patientsfound in cblF patients

•• Transfection Transfection of cblF fibroblasts with wildof cblF fibroblasts with wild--type type LMBD1 rescued LMBD1 rescued cobalamin coenzyme synthesiscobalamin coenzyme synthesis

•• LMBRD1 LMBRD1 identifedidentifed as cblF geneas cblF gene and suggests that LMBD1 is and suggests that LMBD1 is a lysosomal membrane exporter for cobalamina lysosomal membrane exporter for cobalamin

Homozygosity mappingHomozygosity mapping

Page 34: B. Fowler University Children's Hospital Basel, Switzerland · The CblD defect of cellular Cbl metabolism one gene – three phenotypes • Original cblD 2 siblings with combined

Mutations in the LMBRD1 gene (encoding LMBD1, a lysosomal Mutations in the LMBRD1 gene (encoding LMBD1, a lysosomal membrane protein) found in cblF patientsmembrane protein) found in cblF patients

1 2 3 4 5 6 7 8 9

cytosolic

Intra-lysosomal

N-terminus

C-terminusT134fs

L352fs

G88

G78

G170

G347 G

448

G457

10 66 101 165 202 328 368 432 489

540

32 44 123 143 224 306 390 410 511

G Putative glycosylation site

Site of mutation (fs = frameshift)

T172fs

K281fs

T237X

No. 2No. 5

No. 1

No. 3

No. 4

The 1056delG allele (No. 5) leading to a The 1056delG allele (No. 5) leading to a frameshiftframeshift and premature and premature termination codon in termination codon in exonexon 11 was present on 18 of the 24 disease 11 was present on 18 of the 24 disease chromosomes (common 1.34 Mb chromosomes (common 1.34 Mb haplotypehaplotype).).

••6q136q13

••18 exons18 exons

••61.4 kDa 61.4 kDa proteinprotein

••540 amino 540 amino acidsacids

Page 35: B. Fowler University Children's Hospital Basel, Switzerland · The CblD defect of cellular Cbl metabolism one gene – three phenotypes • Original cblD 2 siblings with combined

cblF0

2+Vec

tor O

nlycb

lF02+

LMBD1-

WT

cblF0

9+Vec

tor O

nlycb

lF09+

LMBD1-

WT

cblD

+Vec

tor O

nlycb

lD+L

MBD1-W

T

0

5

10

15

20

25A P = 0 .0 1 5

P < 0 .0 0 1

P = 0 .9 0 1

Met

hylc

obal

amin

( % o

f tot

al c

obal

amin

s)

cblF0

2+Vec

tor O

nly

cblF0

2+LM

BD1-W

Tcb

lF09+

Vector

Only

cblF0

9+LM

BD1-W

Tcb

lD+V

ector

Only

cblD

+LMBD1-

WT

0

1

2

3

4

5

6B

P<0 .0 0 1

P=0 .0 0 5

P=0 .6 5 1

Ade

nosy

lcob

alam

in( %

of t

otal

cob

alam

ins)

Methylcobalamin synthesisMethylcobalamin synthesis Adenosylcobalamin synthesisAdenosylcobalamin synthesis

Transfection of cblF fibroblasts wildTransfection of cblF fibroblasts wild--type LMBD1 rescued type LMBD1 rescued cobalamin coenzyme synthesis and function. cobalamin coenzyme synthesis and function.

Page 36: B. Fowler University Children's Hospital Basel, Switzerland · The CblD defect of cellular Cbl metabolism one gene – three phenotypes • Original cblD 2 siblings with combined

Coelho D, Suormal T, Stucki M, Lerner-Ellis JP, Rosenblatt DS, Newbold R, Baumgartner M, Fowler B.

TcR

TcR = Transcobalamin

Page 37: B. Fowler University Children's Hospital Basel, Switzerland · The CblD defect of cellular Cbl metabolism one gene – three phenotypes • Original cblD 2 siblings with combined

AcknowledgementsAcknowledgements

Terttu Suormala, David Coelho (BaselTerttu Suormala, David Coelho (Basel),),Matthias Baumgartner, Martin Matthias Baumgartner, Martin StuckiStucki (Z(Züürich)rich)

Jordan LernerJordan Lerner--Ellis, David Rosenblatt (Montreal)Ellis, David Rosenblatt (Montreal)

Petra Petra ZavadakovaZavadakova, Viktor Ko, Viktor Kožžich (Prague)ich (Prague)

Hans Georg Koch, Martin Hans Georg Koch, Martin BerghBerghääuseruser ((MMüünsternster))

James E. Wraith (Manchester) , Alberto Burlina (Padua)James E. Wraith (Manchester) , Alberto Burlina (Padua)

Adrian Sewell, Adrian Sewell, JJüürgenrgen HerwigHerwig (Frankfurt)(Frankfurt)

Many colleagues who sent us fibroblastsMany colleagues who sent us fibroblasts

Swiss National Science Foundation grant No 3200Swiss National Science Foundation grant No 3200--066878066878

Page 38: B. Fowler University Children's Hospital Basel, Switzerland · The CblD defect of cellular Cbl metabolism one gene – three phenotypes • Original cblD 2 siblings with combined