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Featured Research from universities, journals, and other organizations Date: Source: Summary: January 16, 2014 University of Chicago Medical Center Dogs and wolves evolved from a common ancestor between 9,000 and 34,000 years ago, before humans transitioned to agricultural societies, according to an analysis of modern dog and wolf genomes from areas of the world thought to be centers of dog domestication. Share This Credit: Freedma, et al. / PLoS Genetics [Click to enlarge image] D This chart depicts wolf and dog lineages as they diverge over time. ogs and wolves evolved from a common ancestor between 9,000 and 34,000 years ago, before humans transitioned to agricultural societies, according to an analysis of modern dog and wolf genomes from areas of the world thought to be centers of dog domestication. The study, published in PLoS Genetics on January 16, 2014, also shows that dogs are more closely related to each other than wolves, regardless of geographic origin. This suggests that part of the genetic overlap observed between some modern dogs and wolves is the result of interbreeding after dog domestication, not a direct line of descent from one group of wolves. This reflects a more complicated history than the popular story that early farmers adopted a few docile, friendly wolves that later became our beloved, modern- day companions. Instead, the earliest dogs may have first lived among hunter-gatherer societies and adapted to agricultural life later. "Dog domestication is more complex than we originally thought," said John Novembre, associate professor in the Department of Human Genetics at the University of Chicago and a senior author on the study. "In this analysis we didn't see clear evidence in favor of a multi-regional model, or a single origin from one of the living wolves that we sampled. It makes the field of dog domestication very intriguing going forward." The team generated the highest quality genome sequences to date from three gray wolves: one each from China, Croatia and Israel, representing three regions where dogs are believed to have originated. They also produced genomes for two dog breeds: a basenji, a breed which originates in central Africa, and a dingo from Australia, both areas that have been historically isolated from modern wolf populations. In addition to the wolves and dogs, they sequenced the genome of a golden jackal to serve as an "outgroup" representing earlier divergence. Their analysis of the basenji and dingo genomes, plus a previously published boxer genome from Europe, showed that the dog breeds were most closely related to each other. Likewise, the three wolves from each geographic area were more closely related to each other than any of the dogs. Novembre said this tells a different story than he and his colleagues anticipated. Instead of all three dogs being closely related to one of the wolf lineages, or each dog being related to its closest geographic counterpart (i.e. the basenji and Israeli wolf, or the dingo and Chinese wolf), they seem to have descended from an older, wolf-like ancestor common to both species. "One possibility is there may have been other wolf lineages that these dogs diverged from that then went extinct," he said. "So now when you ask which wolves are dogs most closely related to, it's none of these three because these are wolves that diverged in the recent past. It's something more ancient that isn't well represented by today's wolves." Accounting for gene flow between dogs and wolves after domestication was a crucial step in the analyses. According to Adam Freedman, a postdoctoral fellow at the University of California, Los Angeles (UCLA) and the lead author on the study, gene flow across canid species appears more pervasive than previously thought. "If you don't explicitly consider such exchanges, these admixture events get confounded with shared ancestry," he said. "We also found evidence for genetic exchange between wolves and jackals. The picture emerging from our analyses is that these exchanges may play an important role in shaping the diversification of canid species." Domestication apparently occurred with significant bottlenecks in the historical population sizes of both early dogs and wolves. Freedman and his colleagues were able to infer historical sizes of dog and wolf populations by analyzing genome-wide patterns of variation, and show that dogs suffered a 16-fold reduction in population size as they diverged from wolves. Wolves also experienced a sharp drop in population size soon after their divergence from dogs, implying that diversity among both animals' common ancestors was larger than represented by modern wolves. The researchers also found differences across dog breeds and wolves in the number of amylase (AMY2B) genes that help digest starch. Recent studies have suggested that this gene was critical to domestication, allowing early dogs living near humans to adapt to an agricultural diet. But the research team surveyed genetic data from 12 additional dog breeds and saw that while most dog breeds had high numbers of amylase genes, those not associated with agrarian societies, like the Siberian husky and dingo, did not. They also saw evidence of this gene family in wolves, meaning that it didn't develop exclusively in dogs after the two species diverged, and may have expanded more recently after domestication. Novembre said that overall, the study paints a complex picture of early domestication. "We're trying to get every thread of evidence we can to reconstruct the past," he said. "We use genetics to reconstruct the history of population sizes, relationships among populations and the gene flow that occurred. So now we have a much more detailed picture than existed before, and it's a somewhat surprising picture." Story Source: Related Topics Plants & Animals Fossils & Ruins Related Articles Genomes of modern dogs and wolves provide new insights on domestication Save/Print: + Share: Trending Topics Breaking News: Ground Breaking, 3D-Printed Hip Surgery Related Stories Teaching Young Wolves New Tricks: Wolves Are Considerably Better Imitators Than Dogs Jan. 31, 2014 — Although wolves and dogs are closely related, they show some striking differences. Scientists have undertaken experiments that suggest that wolves observe one another more closely than dogs and so ... full story Domestication of Dogs May Have Elaborated on a Pre- Existing Capacity of Wolves to Learn from Humans Dec. 3, 2013 — Wolves can learn from observing humans and pack members where food is hidden and recognize when humans only pretend to hide food, reports a new study. The findings imply that when our ancestors ... full story Dogs Likely Originated in Europe More Than 18,000 Years Ago, Biologists Report Nov. 14, 2013 — Wolves likely were domesticated by European hunter-gatherers more than 18,000 years ago, and gradually evolved into dogs that became household pets, biologists ... full story Siberian Fossil Revealed to Be One of the Oldest Known Domestic Dogs Mar. 6, 2013 — Analysis of DNA extracted from a fossil tooth recovered in southern Siberia confirms that the tooth belonged to one of the oldest known ancestors of the modern ... full story Small Dogs Originated in the Middle East, Genetic Study Finds Feb. 23, 2010 — A genetic study has found that small domestic dogs probably originated in the Middle East more than 12,000 years ago. Researchers have traced the evolutionary history of the IGF1 gene, finding that ... full story from the past week Plants & Animals Earth & Climate Fossils & Ruins Email to a friend Facebook Twitter Google+ Print this page + More options Autofil™ Bottletop Filter thomassci.com/Aut For the sterile preparation of TC media, buffers and more. 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Page 1: Autofil™ Bottletop Filterhoegbiologyportfolio.weebly.com/uploads/2/5/4/6/25460620/...Featured Research from universities, journals, and other organizations Date: Source: Summary:

Featured Research from universities, journals, and other organizations

Date:

Source:

Summary:

January 16, 2014

University of Chicago Medical Center

Dogs and wolves evolved from a common ancestor between 9,000 and34,000 years ago, before humans transitioned to agricultural societies,according to an analysis of modern dog and wolf genomes from areasof the world thought to be centers of dog domestication.

Share This

Credit: Freedma, et al. / PLoS Genetics [Click to enlarge image]

D

This chart depicts wolf and dog lineages as they diverge over time.

ogs and wolves evolved from a common ancestor between 9,000and 34,000 years ago, before humans transitioned to agriculturalsocieties, according to an analysis of modern dog and wolf genomes

from areas of the world thought to be centers of dog domestication.

The study, published in PLoS Genetics on January 16,2014, also shows that dogs are more closely related toeach other than wolves, regardless of geographicorigin. This suggests that part of the genetic overlapobserved between some modern dogs and wolves isthe result of interbreeding after dog domestication, nota direct line of descent from one group of wolves.

This reflects a more complicated history than thepopular story that early farmers adopted a few docile,friendly wolves that later became our beloved, modern-day companions. Instead, the earliest dogs may havefirst lived among hunter-gatherer societies andadapted to agricultural life later.

"Dog domestication is more complex than we originallythought," said John Novembre, associate professor inthe Department of Human Genetics at the University ofChicago and a senior author on the study. "In thisanalysis we didn't see clear evidence in favor of amulti-regional model, or a single origin from one of theliving wolves that we sampled. It makes the field of dogdomestication very intriguing going forward."

The team generated the highest quality genome sequences to date from three graywolves: one each from China, Croatia and Israel, representing three regions wheredogs are believed to have originated. They also produced genomes for two dogbreeds: a basenji, a breed which originates in central Africa, and a dingo fromAustralia, both areas that have been historically isolated from modern wolf populations.In addition to the wolves and dogs, they sequenced the genome of a golden jackal toserve as an "outgroup" representing earlier divergence.

Their analysis of the basenji and dingo genomes, plus a previously published boxergenome from Europe, showed that the dog breeds were most closely related to eachother. Likewise, the three wolves from each geographic area were more closely relatedto each other than any of the dogs.

Novembre said this tells a different story than he and his colleagues anticipated.Instead of all three dogs being closely related to one of the wolf lineages, or each dogbeing related to its closest geographic counterpart (i.e. the basenji and Israeli wolf, orthe dingo and Chinese wolf), they seem to have descended from an older, wolf-likeancestor common to both species.

"One possibility is there may have been other wolf lineages that these dogs divergedfrom that then went extinct," he said. "So now when you ask which wolves are dogsmost closely related to, it's none of these three because these are wolves thatdiverged in the recent past. It's something more ancient that isn't well represented bytoday's wolves."

Accounting for gene flow between dogs and wolves after domestication was a crucialstep in the analyses. According to Adam Freedman, a postdoctoral fellow at theUniversity of California, Los Angeles (UCLA) and the lead author on the study, geneflow across canid species appears more pervasive than previously thought.

"If you don't explicitly consider such exchanges, these admixture events getconfounded with shared ancestry," he said. "We also found evidence for geneticexchange between wolves and jackals. The picture emerging from our analyses is thatthese exchanges may play an important role in shaping the diversification of canidspecies."

Domestication apparently occurred with significant bottlenecks in the historicalpopulation sizes of both early dogs and wolves. Freedman and his colleagues wereable to infer historical sizes of dog and wolf populations by analyzing genome-widepatterns of variation, and show that dogs suffered a 16-fold reduction in population sizeas they diverged from wolves. Wolves also experienced a sharp drop in populationsize soon after their divergence from dogs, implying that diversity among both animals'common ancestors was larger than represented by modern wolves.

The researchers also found differences across dog breeds and wolves in the numberof amylase (AMY2B) genes that help digest starch. Recent studies have suggestedthat this gene was critical to domestication, allowing early dogs living near humans toadapt to an agricultural diet. But the research team surveyed genetic data from 12additional dog breeds and saw that while most dog breeds had high numbers ofamylase genes, those not associated with agrarian societies, like the Siberian huskyand dingo, did not. They also saw evidence of this gene family in wolves, meaning thatit didn't develop exclusively in dogs after the two species diverged, and may haveexpanded more recently after domestication.

Novembre said that overall, the study paints a complex picture of early domestication.

"We're trying to get every thread of evidence we can to reconstruct the past," he said."We use genetics to reconstruct the history of population sizes, relationships amongpopulations and the gene flow that occurred. So now we have a much more detailedpicture than existed before, and it's a somewhat surprising picture."

Story Source:

Related Topics

Plants & Animals

Fossils & Ruins

Related Articles

Genomes of modern dogs and wolves provide new insights on

domestication

Save/Print: +Share:

Trending Topics

Breaking News:

Ground Breaking, 3D-Printed Hip Surgery

Related Stories

Teaching Young Wolves NewTricks: Wolves AreConsiderably Better ImitatorsThan Dogs

Jan. 31, 2014 — Although wolves and dogs areclosely related, they show some striking differences.Scientists have undertaken experiments thatsuggest that wolves observe one another moreclosely than dogs and so ... full story

Domestication of Dogs MayHave Elaborated on a Pre-Existing Capacity of Wolves toLearn from HumansDec. 3, 2013 — Wolves can learn

from observing humans and pack members wherefood is hidden and recognize when humans onlypretend to hide food, reports a new study. Thefindings imply that when our ancestors ... full story

Dogs Likely Originated inEurope More Than 18,000 YearsAgo, Biologists ReportNov. 14, 2013 — Wolves likely were

domesticated by European hunter-gatherers morethan 18,000 years ago, and gradually evolved intodogs that became household pets, biologists... full story

Siberian Fossil Revealed to BeOne of the Oldest KnownDomestic DogsMar. 6, 2013 — Analysis of DNAextracted from a fossil toothrecovered in southern Siberiaconfirms that the tooth belonged toone of the oldest known ancestors of

the modern ... full story

Small Dogs Originated in theMiddle East, Genetic StudyFindsFeb. 23, 2010 — A genetic study hasfound that small domestic dogsprobably originated in the MiddleEast more than 12,000 years ago.Researchers have traced the

evolutionary history of the IGF1 gene, finding that... full story

from the past week

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University of Chicago Medical Center. "Genomes of modern dogs and wolvesprovide new insights on domestication." ScienceDaily. ScienceDaily, 16 January2014. <www.sciencedaily.com/releases/2014/01/140116190137.htm>.

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The above story is based on materials provided by University of Chicago MedicalCenter. Note: Materials may be edited for content and length.

Journal Reference:

1. Adam H. Freedman, Ilan Gronau, Rena M. Schweizer, Diego Ortega-Del Vecchyo,Eunjung Han, Pedro M. Silva, Marco Galaverni, Zhenxin Fan, Peter Marx, BelenLorente-Galdos, Holly Beale, Oscar Ramirez, Farhad Hormozdiari, Can Alkan,Carles Vilà, Kevin Squire, Eli Geffen, Josip Kusak, Adam R. Boyko, Heidi G. Parker,Clarence Lee, Vasisht Tadigotla, Adam Siepel, Carlos D. Bustamante, Timothy T.Harkins, Stanley F. Nelson, Elaine A. Ostrander, Tomas Marques-Bonet, Robert K.Wayne, John Novembre. Genome Sequencing Highlights the Dynamic EarlyHistory of Dogs. PLoS Genetics, 2014; 10 (1): e1004016 DOI:10.1371/journal.pgen.1004016

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http://www.sciencedaily.com/releases/2014/01/140116190137.htm?utm_source=rss&utm_medium=rss&utm_campaign=genomes-of-modern-dogs-and-wolves-provide-new-insights-on-domestication May 19, 2014, 11:53:16 AM

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THIS INFOGRAPHIC ON THE HISTORY OF MAN'S BEST FRIEND MAY BE

CUTE, BUT IT HIDES THE DARK SIDE OF DOG BREEDING.

INFOGRAPHIC

OF THE DAYInfographic: How DogsEvolved

Some 40,000 years ago, dogs were wolves: silver-eyed stalkers who

hunted man with blood-smeared lips in the deserts of Paleolithic

Persia. Today, though, millennia of domestication have turned those

limber predators into an assorted motley of breeds like the

Pomeranian, a pocketbook-sized canine idiot so unwolf-like that it

would only be recognized by its primordial ancestors as an amuse-

bouche, not a peer.

How the heck did we take a wolf and come up with bulldogs,

Yorkshires, collies, golden retrievers, whippets, goldendoodles, and

otterhounds? Designed by Parisian artist Alice Bouchardon, the

"Evolution of Dogs" tries to make sense of the complicated Darwinian

(and not-so-Darwinian) machinations that have led us to the kinds of

dog breeds that can be toted in Paris Hilton's handbag.

According to a genetic analysis by UCLA in 2010, what we call dogs

today likely originated as gray wolves about 33,000 years ago in the

Middle East, the same area where both domestic cats and many

livestock animals originated. But exactly how is a creature like a pug, a

bull terrier, or even a coyote related to those wolves? In Bouchardon's

infographic, the gray wolf's heritage is broken down into 11 different

families of dogs, ranging from hounds and herding dogs to toy dogs

and mastiffs.

There are now over 400 breeds and they can all

roughly be characterized by the shapes of their

skull. The most wolf-like dogs, such as Siberian

Huskies, have dolichocephalic skulls, which

dedicates the largest proportion of the skull to the

nasal cavity for smelling and hunting. Mesocephalic

skulls are the most common, and dedicate equal

portions of the skull to cranium and nasal cavity, while brachycephalic

skulls are ones like in the pug and bulldog, where the snout is either flat

or nonexistent.

Although this infographic is light in tone, it's important to keep in mind

while looking at it that over-breeding has largely ruined many of these

breeds over the course of the last century. Consider, for example, what

some of the most popular dogs today looked like just a hundred years

ago, and it becomes clear that humans have aggressively bred many

dogs to actually increase their likelihood of having genetic diseases.

“HOW THE HECK DID WE

TAKE A WOLF AND COME

UP WITH A

GOLDENDOODLE? ”

http://www.fastcodesign.com/3025003/infographic-of-the-day/how-dogs-evolved May 19, 2014, 12:12:26 PM

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The result? Breeds which are more likely to win blue ribbons at dog

shows, but which live lives full of illness and suffering.

As cute as the Bouchardon's "Evolution of Dogs" chart is, we should try

remember that many breeds of dogs would be better off trying to

recombine with other breeds back into the gray wolf, not further

diverge down a path of genetic mutation from its ancestry.

[Image: Golden Retriever via Shutterstock]

Facebook Twitter

JOHN BROWNLEE

John Brownlee is a writer who lives in Boston with two irate

parakeets and a fiancée of more exquisite pluma… Continued

January 17, 2014 | 8:00 AM

A D D N E W C O M M E N T S I G N I N

Type your comment here.

11 COMMENTS

J O H N B R OW N L E E 4 MONTHS AGO

Clearly the author does not own dogs, or this article wouldn't read like lazy

research and 5 minutes fiddling around on google. The Bernese MOUNTAIN (a

word omitted twice on the infographic) Dog and Newfoundland aren't even

retrievers!

Am I mistaken, or did Fast Co. Design not just recently post an article on spotting

bad infographics? Tsk tsk.

N I K K I S I M O N

Share Link Reply

N I K K I S I M O N 4 MONTHS AGO

The St. John's water dog was the ancestor of the Newfoundland and many

of the Retriever breeds. St. John's water dog was used in a similar fashion to

Newfoundlands working with fishermen to help pull in nets. The

Newfoundland's large size is do to the Mastiff blood that when in to it

creation. If you will note the color of the Newfoundland and the Bernese

group are the mastiff color which shows their mixed heritage.

M AT T H E W BA K E R

Share Link Reply

M AT T H E W BA K E R 3 MONTHS AGO

due to the Mastiff blood, went into its* creation

DA N A

Share Link Reply

Comment removed.

J O H N B R OW N L E E 4 MONTHS AGO

The Shutterstock photo is actually Yellow Labrador Retriever.

R O B E RT E A M E S

Share Link Reply

J O H N B R OW N L E E 4 MONTHS AGO

No water dogs? poodle form the same branch as the german shepard!

Chihuahuas from the toy branch! what about xoloscuintles?

PA B LO R OVA LO

Share Link Reply

J O H N B R OW N L E E 4 MONTHS AGOA L E X A N D E R T H O M A S

http://www.fastcodesign.com/3025003/infographic-of-the-day/how-dogs-evolved May 19, 2014, 12:12:26 PM

John, Brownlee. "Infographic: How Dogs Evolved." Co.Design. 17 Jan. 2014. Web. 19 May 2014.

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DinosaursEducation

Share

By Bob Strauss

Prehistoric Dogs40 Million Years of Dog Evolution, from Amphicyon to the Labradoodle

In many ways, the story of dog evolution follows the same plot line as

the evolution of horses and elephants: a small, inoffensive, ancestral

species gives rise, over the course of tens of millions of years, to the

respectably sized descendants we know and love today. But there are

two big differences in this case: first, dogs are carnivores, and the

evolution of carnivores is a twisty, serpentine affair involving not only

dogs, but prehistoric hyenas, bears, cats, and now-extinct mammals

like creodonts and mesonychids. And second, of course, dog evolution

took a sharp right turn about 15,000 years ago, when the first wolves

were domesticated by early humans.

As far as paleontologists can tell, the very first carnivorous mammals

evolved during the late Cretaceous period, about 75 million years ago

(the half-pound Cimolestes, which lived high up in trees, being the

most likely candidate). However, it's more likely that every

carnivorous animal alive today can trace its ancestry back to Miacis, a

slightly bigger, weasel-like creature that lived about 55 million years

ago, or 10 million years after the dinosaurs went extinct. Miacis was

far from a fearsome killer, though: this tiny furball was also arboreal,

and feasted on insects and eggs as well as small animals.

Before the Canids - Creodonts, Mesonychids & Friends

Modern dogs evolved from a line of carnivorous mammals called

"canids," after the characteristic shape of their teeth. Before (and

alongside) the canids, though, there were such diverse families of

predators as amphicyonids (the "bear dogs," typified by Amphicyon,

which seem to have been more closely related to bears than dogs),

prehistoric hyenas (Ictitherium was the first of this group to live on

the ground rather than in trees), and the "marsupial dogs" of South

America and Australia. Although vaguely dog-like in appearance and

behavior, these predators weren't directly ancestral to modern

canines.

Even more fearsome than bear dogs and marsupial dogs were mesonychids and creodonts. The most famous mesonychids were the one-ton Andrewsarchus,

the largest ground-dwelling carnivorous mammal that ever lived, and the smaller and more wolflike Mesonyx; oddly enough, mesonychids were ancestral not

to modern dogs or cats, but to prehistoric whales. The creodonts, on the other hand, left no living descendants; the most noteworthy members of this breed

were Hyaenodon and the strikingly named Sarkastodon, the former of which looked (and behaved) like a wolf and the latter of which looked (and behaved)

like a grizzly bear.

The First Canids - Hesperocyon and the "Bone-Crushing Dogs"

Paleontologists agree that the late Eocene (about 40 to 35 million years ago) Hesperocyon was directly ancestral to all later canids--and thus to the genus

Canis, which branched off from a subfamily of canids about six million years ago. This "western dog" was only about the size of a small fox, but its inner-ear

structure was characteristic of later dogs, and there's some evidence that it may have lived in communities, either high up in trees or in underground

burrows. Hesperocyon is very well-represented in the fossil record; in fact, this was one of the most common mammals of prehistoric North America.

Another group of early canids were the borophagines, or "bone-crushing dogs," equipped with powerful jaws and teeth suitable for scavenging the carcasses

of mammalian megafauna. The largest, most dangerous borophagines were the 100-pound Borophagus and the even bigger Epicyon; other genera included

the earlier Tomarctus and Aelurodon, which were more reasonably sized. We can't say for sure, but there's some evidence that these bone-crushing dogs

(which were also restricted to North America) hunted or scavenged in packs, like modern hyenas.

The First True Dogs - Leptocyon, Eucyon and the Dire Wolf

Here's where things get a bit confusing. Shortly after the appearance of Hesperocyon 40 million years ago, Leptocyon arrived on the scene--not a brother,

but more like a second cousin once removed. Leptocyon was the first true canine (that is, it belonged to the caninae subfamily of the canidae family), but a

small and unobtrusive one, not much bigger than Hesperocyon itself. The immediate descendant of Leptocyon, Eucyon, had the good fortune to live at a

time when both Eurasia and South America were accessible from North America--the first via the Bering land bridge, and the second thanks to the

uncovering of central America. In North America, about six million years ago, populations of Eucyon evolved into the first members of the modern dog genus

Canis, which spread to these other continents.

But the tale doesn't end there. Although canines (including the first coyotes) continued to live in North America during the Pliocene epoch, the first plus-

sized wolves evolved elsewhere, and "re-invaded" North America shortly before the ensuing Pleistocene (via that same Bering land bridge). The most famous

of these canines was the Dire Wolf, Canis diris, which evolved from an "old world" wolf that colonized both North and South America (by the way, the Dire

Wolf competed directly for prey with Smilodon, the "saber-toothed tiger.")

The end of the Pleistocene epoch witnessed the rise of human civilization around the world. As far as we can tell, the first domestication of the Gray Wolf

occurred somewhere in Europe or Asia anywhere from 30,000 to 15,000 years ago. After 40 million years of evolution, the modern dog had finally made its

debut!

Here's a list of the most notable prehistoric dogs and dog ancestors; just click on the links for more information.

Aelurodon This "cat-toothed" dog behaved more like a hyena.

Amphicyon Otherwise known as the "bear dog."

Borophagus One of the biggest of the bone-crushing canids.

Cynodictis This was once thought to be the first true dog.

Dire Wolf A giant wolf of the Pleistocene epoch.

Dusicyon This "foolish dog" went extinct in the 19th century.

Epicyon This prehistoric dog was built more like a big cat.

Eucyon The immediate predecessor of modern canines.

Hesperocyon An early ancestor of the modern dog.

Ictitherium One of the first ground-dwelling hyenas.

Leptocyon A tiny, foxlike ancestor of the modern dog.

Tomarctus A bone-crushing dog of the Miocene epoch.

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It has been a long road from

the earliest dog ancestors to

the modern Grey Wolf

(Wikimedia Commons)

Borophagus, the "voracious

eater," weighed up to 100

pounds fully grown (Getty

Images)

The Pleistocene Dire Wolf was

the largest canine ancestor

that ever lived (Daniel Reed)

http://dinosaurs.about.com/od/otherprehistoriclife/a/Prehistoric-Dogs-The-Story-Of-Dog-Evolution.htm May 20, 2014, 11:54:55 AM

Strauss, Bob. "Why Your Dog's Pedigree Goes Back 40 Million Years." About.com Dinosaurs. About.com, 2014. Web. 20 May 2014.View in list Edit

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How Did Wolves Become Dogs?by Brian Thomas, M.S. *

From the tiny Chihuahua to the massive mastiff, the over 200 breeds of domesticated dogs come in a wide variety of different body sizes and proportions, hair lengths and textures, and

demeanors.1 Evolution asserts that animals change through a gradual accumulation of mutations. But evidence shows that the wolf-to-dog transition occurred rapidly, according to pre-designed genetic potential and not mutations.

Mark Derr, author of a new book titled How the Dog Became the Dog: From Wolves to Our Best Friends, discussed on National Public Radio's program Fresh Air how human interactionmay have domesticated wolves beginning in the Ice Age. Since dogs are smaller than wolves and have more varying proportions, coat colors, and other features, interviewer Dave Daviesasked Derr, "So how could this association of wolves with humans lead to these physical changes?"

Derr replied:

Well, what happened was that you had populations of dog-wolves that became isolated from the greater wolf population and in doing so, they began to breed more closely—toinbreed as it were. And when you inbreed, you get genetic peculiarities that arise, and those peculiarities then begin to become part of the population…. In other words, a mutation

will appear in a small population. If I don't want it, what I do is kill the animals so that they don't reproduce. If I do want it, I try to get them to reproduce.2

So, according to Derr, a certain "peculiarity"—for example, a curly tail—first arises by mutation. This mutation and its resulting trait are supposedly then concentrated into a distinct doglineage by breeding the dogs that have it.

At first, this might sound reasonable, but a landmark study published in the journal Bioessays in 2009 told an entirely different story. Researchers artificially selected foxes for"tameability." Foxes were certainly part of the originally created dog kind, having been known to interbreed with coyotes, for instance. The experiment, which utilized Russian fox fur

farms, began "about 50 years ago" and has produced scores of fox generations thus far.3

The researchers chose foxes that were the least aggressive and bred them. They chose 100 females and 30 males "as the initial parental generation for selection for tolerance of human or

docility, then for tameability."3 Then, they used approximately the top 10 percent of the tamest offspring as parents for each next generation for dozens of generations.

"As a result of such a rigorous selection, the offspring exhibiting the aggressive and fear avoidance responses were eliminated from the experimental population in just two-three

generations of selection," the study authors wrote.3

They didn't need thousands of years, just three generations. And at just the sixth generation, fox pups eagerly sought human contact, complete with wagging tails, "whining, whimpering,

and licking in a dog-like manner."3

And amazingly, the tame foxes quickly acquired an array of traits shared by many domesticated mammals, showing that mutations were not involved. To show this, the authors comparedthe wild and domesticated horse, cow, sheep, pig, dog, and rabbit. The wild animals have similar and stable traits, including erect ears, straight tails, restricted breeding seasons, anduniform coat colors and body sizes. But the domesticated ones had such features as floppy ears, curled tails, spotted coat colors, variations in coat textures and lengths, variations inbreeding time, and marked differences in skeletal size and proportion.

Surely, chance-based genetic mutations could never produce identical variations in so many different kinds of mammals. For this reason, the authors wrote, "Finally, it is difficult to

interpret the changes in the domesticated foxes as a result of randomly arisen new mutations."3

Instead, changes in gene regulation must have caused these trait variations. That's not evolution by mutation, but variation by design. Thus, according to this research, dogs could havebecome "man's best friend" in three dog generations from a wolf ancestor simply by selective breeding in the recent past.

References

1. The American Kennel Club lists over 235 breeds, 173 of which are eligible to compete at AKC events. See the Complete Breed List posted on the American Kennel Club website at akc.org. Wikipedia includes over 500 breeds in its list of dog breeds posted on wikipedia.org.

2. How Dogs Evolved Into 'Our Best Friends.' Fresh Air. National Public Radio. Transcript posted on npr.org November 8, 2011, accessed November 15, 2011.

3. Trut, L., I. Oskina and A. Kharlamova. 2009. Animal evolution during domestication: the domesticated fox as a model. Bioessays. 31 (3): 349-360.

* Mr. Thomas is Science Writer at the Institute for Creation Research.

Article posted on November 18, 2011.

© 2014 Institute for Creation Research. All Rights Reserved.

Proclaiming Scientific Truth in Creation | www.icr.org

http://www.icr.org/article/how-did-wolves-become-dogs/ May 21, 2014, 12:32:31 PM

Thomas, Brian. "How Did Wolves Become Dogs?" How Did Wolves Become Dogs? N.p., 18 Nov. 2011. Web. 21 May 2014.

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Dogs Adapted to AgricultureAs wolves became domesticated, their genes adapted to a starch-rich diet of human leftovers.

By Ed Yong | January 23, 2013

A comparison of the full genomes of dogs and

wolves revealed many changes that accrued as wild

canines evolved into man’s best friend.

Unsurprisingly, many of these differing regions

regions affect the brain, and may explain the

different temperaments of wolves and dogs. But the

comparison, published today in Nature also

pinpointed several regions that are involved in

digestion, including genes that help to break down

starch.

“This supports the idea that proto-dogs evolved new

digestive adaptations to rely on the edible by-

product of the agricultural revolution – garbage,”

said Brian Hare from Duke University, who studies animal domestication and was not involved in the

study.

Israeli fossils and genetic studies date dog domestication to around 10,000 years ago, coinciding with the

Agricultural Revolution, when humans went from nomadic hunter-gatherers to farming and living in

settlements. Some scientists have suggested that wolves were attracted to dump sites near these early

settlements and scavenged on leftovers from vegetables and cereal plants. “Dogs may have

domesticated themselves by seeking out humans, to eat from their scrap-heaps,” said Kerstin Lindblad-

Toh from Uppsala University, who led the new research.

Lindblad-Toh led the team that published the full domestic dog genome back in 2005. With that project

completed, she turned to the evolutionary history of our canine companions. “While a lot of studies have

looked at the when and where of dog domestication, little has been done to understand how this

happened on a genomic level,” she said.

Together with Erik Axelsson, Lindblad-Toh sequenced the full genomes of 12 wolves from around the

world, as well as 60 dogs representing 14 diverse breeds. They searched for signatures of domestication

by looking for sequences that that showed the greatest differences between dogs and wolves, or for

sequences that were consistent across dog breeds but varied in wolves.

The team eventually came up with a list of 36 regions, containing a total of 122 genes. Half of these

regions contained brain genes. “This is not surprising,” said Lindblad-Toh. Compared to wolves, dogs are

less aggressive, more sociable, less afraid of humans, and better able to read our behavioral cues.

Six other regions, containing 10 genes, were involved in digesting fat and starch. Specifically, dogs carry

extra copies of the gene for amylase—an intestinal enzyme that cuts starch into maltose—and now

produce 28 times more of the protein than their wolf counterparts. Dogs also produce 12 times more

maltase-glucoamylase, which converts maltose into sugar, thanks to several mutations in the gene for

this enzyme. Mutations in a third gene—SGLT1—improved the function of a protein that absorbs the

sugar through the gut.

“They have made a very convincing case for the involvement of starch digestion in the evolution of the

dog,” said Ben Sacks from the University of California, Davis, who was not involved in the study.

(Interestingly, some of the changes observed in dog digestion have parallels in humans. As we moved

from hunting meat and gathering berries to farming grains and vegetables, we, too, duplicated our

amylase gene, which some have seen as an adaptation to a starch-rich diet.)

Rodney Honeycutt, an evolutionary geneticist from Pepperdine University, was also impressed by the

data, but noted that it is unclear when these changes took place. “The ability to digest starch effectively

would not necessarily make an animal docile, and may have occurred subsequent to domestication,” he

said.

But Lindblad-Toh argued that mental and digestive changes are likely to go hand in hand. “Dogs that

were not afraid of people and that could adapt to a more omnivorous diet may have been the ones that

stayed and were domesticated,” she said.

E. Axelsson et al., “The genomic signature of dog domestication reveals adaptation to a

starch-rich diet,” Nature, 2013: doi:10.1038/nature11837, 2013.

Tags

genetics & genomics, evolution, domestication and dog

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January 24, 2013

Rudyard Kipling's Just So Stories talked about Wild Dog taking food from

the First Woman - perhaps he knew more about DNA, evolution and

domestication than we thought. We've written about the DNA changes in

the dog and the wolf at http://www.genome-engineering.com/how-the-

dog-and-its-genes-came-out-of-the-wild-woods%E2%80%A6.html

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January 24, 2013

"As we moved from hunting meat and gathering berries to farming grains

and vegetables, we, too, duplicated our amylase gene, which some have

seen as an adaptation to a starch-rich diet.)"

I hope the impractical paleo-diet proponents are reading this. But then

again why would they be on a science website? They have Robb Wolf

feeding them the pseudo version.

Sign in to Report

January 24, 2013

The difference in the epigenetically-effected genetically predisposed

development of the brain and behavior of adult wolves and dogs can be

attributed to exploration using only olfaction (sans vision and hearing)

during the first two weeks of life in wolf pups. The downstream effects of

acquired nutrients and pheromones on subsequent brain development and

behavior are hormone-organized and hormone-activated by the epigenetic

effects of nutrients and pheromones, as they are in all vertebrates and

invertebrates. Moreover, “Olfaction and odor receptors provide a clear

evolutionary trail that can be followed from unicellular organisms to

insects to humans.”

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http://www.the-scientist.com/?articles.view/articleNo/34095/title/Dogs-Adapted-to-Agriculture/ May 22, 2014, 12:15:15 PM

Yong, Ed. "Dogs Adapted to Agriculture | The Scientist Magazine®." The Scientist. N.p., 23 Jan. 2013. Web. 20 May 2014.