application of cht™ ceramic hydroxyapatite for … ceramic hydroxyapatite is a sintered matrix...

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Abstract CHT ceramic hydroxyapatite is a sintered matrix composed of cal- cium and phosphate. Among its varied interactions, it is known to have strong affinity for phosphoryl residues on proteins. This study demonstrates fractionation of proteins based on relative phosphoryla- tion, and subsequent measurement of phosphorylation in the frac- tions with a quantitative assay we have developed for protein applica- tions. Data is shown from a variety of commercially available and ex- perimentally modified proteins. The combination of CHT fractionation and a quantitative phosphorylation assay provides a flexible platform for proteomic research and subsequent scale-up. Introduction The goal of proteomics is to obtain a global and integrated view of biology by studying all the proteins of a cell rather than each one in- dividually and subsequently. By the very definition of proteomics, complex protein mixtures will be encountered (1). To resolve these protein mixtures into their individual components for visualization, identification and characterization, 2-D electrophoresis, the predomi- nant technology in proteomics, has been employed. As an adjunct to electrophoresis, multidimensional purification techniques have been evaluated (2). But even with high resolution separation tech- niques, the assumed 100,000 to 1,000,000 proteins in a biological sample cannot be resolved in a single step. Therefore, fractionation of the proteins mix is necessary. Chromatography on hydroxyapatite is a long established technique for selective fractionation of phos- phorylated proteins and it offers outstanding potential for their en- richment in proteomic research (3). In this presentation we demon- strate the practical value of this application. We also introduce a con- venient quantitative assay for determination of molar phosphorylation on proteins. Materials and methods Column The experiments were conducted on a Bio-Scale MT2 column ob- tained from Bio-Rad Laboratories (Hercules, CA). The column dimen- sions were 0.7 x 3.5 cm. The column was dry packed with CHT Type I resin (Bio-Rad Laboratories, Hercules, CA) using a density of 0.60 gm/ml. Each column was wetted in ten column volumes of 20% etha- nol before equilibration. System All chromatography experiments were automated and executed using a BioLogic DuoFlow™ system and software. Proteins Bovine serum albumin, dephosphorylated casein, α-casein, β-casein, ovalbumin, and human serum were purchased from Sigma-Aldrich (St. Louis, MO). Laboratory phosphorylated ovalbumin was prepared by the method of Morefield et. al. (4) Fig. 1. BioLogic DuoFlow system and CHT matrix used for chromatography of phosphoproteins. CHT type I, 40 µm Sinter temperature: 400°C Pore diameter: ~600-1000Å Surface area: ~40m2/g Conclusions We have developed a chromatography system and an improved phosphate assay for the purification and characterization of phosphoproteins. This facilitates the initial purification of a complex protein mixture when specifically studying phosphoproteins. Additional effort is under development, leading to the isolation of proteins substantially free of non phosphorylated proteins. References 1 Graves, P.R. and Haystead, T.A. J. (2002) Microbiology and Molecular Biology Reviews. 66 : 39-63. 2 Optiteck, G.J., Lewis K. C., Jorgenson, J.W. and Anderegg, R. J. (1997) Ana. Chem. 69: 15118-1524. 3 Gagnon, P. (1996) Purification Tools for Monoclonal Antibodies. Validated Bio- systems, Inc. Arizona. 4 Morefield, G.L., Jiang, D., Romero-Mendez, I.Z., Geahlen, R.L., HogenEsch H. and Hem S.L. (2005) Vaccine 23: 1502-1506. Acknowledgements Special thanks to Ursula Snow and staff of Chromatography Marketing for review and preparation of this poster. Assay procedure 1. Mix 1 volume of sample and 1 volume of 2 M NaOH at 100˚ C for 7 minutes 2. Neutralize with 1 volume of 4.7 M HCl 3. Quantitate phosphate using 96-well plate by QuantiChrom phosphate assay kit (BioAssay Systems, Hayward, CA) Fig. 5. Resolution of ovalbumin and laboratory phosphorylated ovalbumin. Fig. 6. Separation of a phosphoprotein (α casein) from a mixture of plasma proteins. Fig. 3. Correlation of retention vs. phosphate content of proteins. 350 300 250 200 150 100 50 0 Phosphate at peak elution (mM) Moles of phosphate ions per mole of protein R² = 0.8668 0 2 4 6 8 Fig. 4. Determination of inorganic phosphate. R² = 0.9869 0.25 0.20 0.15 0.10 0.05 0.00 A600 0 5 10 15 20 25 30 Phosphate (µM) Fig. 2. Differential retention of phosphoproteins on CHT. To determine the retention of phosphorylated proteins on CHT, elution was carried out with a phos- phate gradient at pH 6.5 The equilibration buffer was 0.05 M MES pH 6.5. The elution buffer was 0.5 M KPO4. The experiment was run with the following configuration: equilibrate with 10 column volumes (CV) equilibration buffer, inject 50 microliters of each protein sample, wash 5 CV, elute with a 20 CV linear gradient to 60% elution buffer, strip with 5 CV of 100% elution buffer. 0.100 0.075 0.050 0.025 0.000 AU 0.00 10.00 20.00 30.00 Min. Tenth 100.0 Ovalbumin BSA ß-casein 75.0 50.0 25.0 0.0 mS/cm 100.0 75.0 50.0 25.0 0.0 mS/cm 1.00 0.75 0.50 0.25 0.00 AU 0.00 30.00 60.00 Min. Tenth Ovalbumin Phosphorylated Ovalbumin 0.0400 0.0350 0.0300 0.0250 0.0200 0.0150 0.0100 0.0050 0.0000 -0.0050 AU 0.00 10.00 20.00 30.00 40.00 Min. Tenth 250.0 200.0 150.0 100.0 50.0 0.0 mS/cm α-casein Plasma Plasma + α-casein α-casein Application of CHT™ Ceramic Hydroxyapatite for Proteomic Analysis Paul Ng, Ning Liu, Chad Eller, Shahram Farshchi, Hong Chen, Aran Paulus, Pete Gagnon

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Page 1: Application of CHT™ Ceramic Hydroxyapatite for … ceramic hydroxyapatite is a sintered matrix composed of cal-cium and phosphate. Among its varied interactions, it is known to have

AbstractCHT ceramic hydroxyapatite is a sintered matrix composed of cal-cium and phosphate. Among its varied interactions, it is known to have strong affinity for phosphoryl residues on proteins. This study demonstrates fractionation of proteins based on relative phosphoryla-tion, and subsequent measurement of phosphorylation in the frac-tions with a quantitative assay we have developed for protein applica-tions. Data is shown from a variety of commercially available and ex-perimentally modified proteins. The combination of CHT fractionation and a quantitative phosphorylation assay provides a flexible platform for proteomic research and subsequent scale-up.

IntroductionThe goal of proteomics is to obtain a global and integrated view of biology by studying all the proteins of a cell rather than each one in-dividually and subsequently. By the very definition of proteomics, complex protein mixtures will be encountered (1). To resolve these protein mixtures into their individual components for visualization, identification and characterization, 2-D electrophoresis, the predomi-nant technology in proteomics, has been employed. As an adjunct to electrophoresis, multidimensional purification techniques have been evaluated (2). But even with high resolution separation tech-niques, the assumed 100,000 to 1,000,000 proteins in a biological sample cannot be resolved in a single step. Therefore, fractionation of the proteins mix is necessary. Chromatography on hydroxyapatite is a long established technique for selective fractionation of phos-phorylated proteins and it offers outstanding potential for their en-richment in proteomic research (3). In this presentation we demon-strate the practical value of this application. We also introduce a con-venient quantitative assay for determination of molar phosphorylation on proteins.

Materials and methodsColumn

The experiments were conducted on a Bio-Scale MT2 column ob-tained from Bio-Rad Laboratories (Hercules, CA). The column dimen-sions were 0.7 x 3.5 cm. The column was dry packed with CHT Type I resin (Bio-Rad Laboratories, Hercules, CA) using a density of 0.60 gm/ml. Each column was wetted in ten column volumes of 20% etha-nol before equilibration. System All chromatography experiments were automated and executed using a BioLogic DuoFlow™ system and software.Proteins Bovine serum albumin, dephosphorylated casein, α-casein, β-casein, ovalbumin, and human serum were purchased from Sigma-Aldrich (St. Louis, MO). Laboratory phosphorylated ovalbumin was prepared by the method of Morefield et. al. (4)

Fig. 1. BioLogic DuoFlow system and CHT matrix used for chromatography of phosphoproteins.

CHT type I, 40 µmSinter temperature: 400°CPore diameter: ~600-1000ÅSurface area: ~40m2/g

ConclusionsWe have developed a chromatography system and an improved phosphate assay for the purification and characterization of phosphoproteins. This facilitates the initial purification of a complex protein mixture when specifically studying phosphoproteins. Additional effort is under development, leading to the isolation of proteins substantially free of non phosphorylated proteins.

References1 Graves, P.R. and Haystead, T.A. J. (2002) Microbiology and Molecular Biology Reviews. 66 : 39-63.2 Optiteck, G.J., Lewis K. C., Jorgenson, J.W. and Anderegg, R. J. (1997) Ana. Chem. 69: 15118-1524. 3 Gagnon, P. (1996) Purification Tools for Monoclonal Antibodies. Validated Bio-systems, Inc. Arizona. 4 Morefield, G.L., Jiang, D., Romero-Mendez, I.Z., Geahlen, R.L., HogenEsch H. and Hem S.L. (2005) Vaccine 23: 1502-1506.

AcknowledgementsSpecial thanks to Ursula Snow and staff of Chromatography Marketing for review and preparation of this poster.

Assay procedure1. Mix 1 volume of sample and 1 volume of 2 M NaOH at 100˚ C for 7 minutes2. Neutralize with 1 volume of 4.7 M HCl3. Quantitate phosphate using 96-well plate by QuantiChrom phosphate assay kit (BioAssay Systems, Hayward, CA)

Fig. 5. Resolution of ovalbumin and laboratory phosphorylated ovalbumin.

Fig. 6. Separation of a phosphoprotein (α casein) from a mixture of plasma proteins.

Fig. 3. Correlation of retention vs. phosphate content of proteins.

350

300

250

200

150

100

50

0

Pho

spha

te a

t pea

k el

utio

n (m

M)

Moles of phosphate ions per mole of protein

R² = 0.8668

0 2 4 6 8

Fig. 4. Determination of inorganic phosphate.

R² = 0.9869

0.25

0.20

0.15

0.10

0.05

0.00

A60

0

0 5 10 15 20 25 30

Phosphate (µM)

Fig. 2. Differential retention of phosphoproteins on CHT.To determine the retention of phosphorylated proteins on CHT, elution was carried out with a phos-phate gradient at pH 6.5 The equilibration buffer was 0.05 M MES pH 6.5. The elution buffer was 0.5 M KPO4. The experiment was run with the following configuration: equilibrate with 10 column volumes (CV) equilibration buffer, inject 50 microliters of each protein sample, wash 5 CV, elute with a 20 CV linear gradient to 60% elution buffer, strip with 5 CV of 100% elution buffer.

0.100

0.075

0.050

0.025

0.000

AU 0.00 10.00 20.00 30.00

Min. Tenth

100.0

Ovalbumin

BSAß-casein

75.0

50.0

25.0

0.0

mS/cm

100.0

75.0

50.0

25.0

0.0

mS/cm

1.00

0.75

0.50

0.25

0.00

AU0.00 30.00 60.00

Min. Tenth

Ovalbumin

PhosphorylatedOvalbumin

0.0400

0.0350

0.0300

0.0250

0.0200

0.0150

0.0100

0.0050

0.0000

-0.0050

AU0.00 10.00 20.00 30.00 40.00

Min. Tenth

250.0

200.0

150.0

100.0

50.0

0.0

mS/cm

α-casein

Plasma

Plasma + α-casein

α-casein

Application of CHT™ Ceramic Hydroxyapatite for Proteomic Analysis

Paul Ng, Ning Liu, Chad Eller, Shahram Farshchi, Hong Chen, Aran Paulus, Pete Gagnon