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Anand Kesavaraju Department of Bioengineering, University of California, Berkeley BRITE REU, University of California, Riverside

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Page 1: Anand Kesavaraju Department of Bioengineering, University of California, Berkeley BRITE REU, University of California, Riverside

Anand KesavarajuDepartment of Bioengineering, University of

California, BerkeleyBRITE REU, University of California, Riverside

Page 2: Anand Kesavaraju Department of Bioengineering, University of California, Berkeley BRITE REU, University of California, Riverside
Page 3: Anand Kesavaraju Department of Bioengineering, University of California, Berkeley BRITE REU, University of California, Riverside

• Importance in cell membrane integrity and signaling.

• Regulates trans-membrane protein movement and plasma membrane-to-cytoskeleton attachment mechanics.

Encyclopedia Britannica. 19 Aug 2009 <http://media-2.web.britannica.com/eb-media/74/53074-004-9F65D813.jpg>.

Page 4: Anand Kesavaraju Department of Bioengineering, University of California, Berkeley BRITE REU, University of California, Riverside

We are testing the effect of various concentrations of cholesterol on plasma membrane biomechanics by pulling nanotubes (tethers) from the membrane and calculating the tether force.

Page 5: Anand Kesavaraju Department of Bioengineering, University of California, Berkeley BRITE REU, University of California, Riverside

We are using optical tweezers to study plasma membrane biomechanics.

Our setup consists of a Solid-state diode pump laser (λ = 1064 nm), various optical components (100x objective), and a piezoelectric stage (nm resolution for both {x,y,z} movement and velocity).

Page 6: Anand Kesavaraju Department of Bioengineering, University of California, Berkeley BRITE REU, University of California, Riverside

The plasma membrane can be represented by a viscoelastic model.

The mechanics of the tethers are explained by a second-order Maxwellian spring – dash plot model of viscoelasticity.

The time-resolved effect on the tether force will be tested (more on this in the Methodology).

Biophysical Journal 89(2005): 4090-4095.

Page 7: Anand Kesavaraju Department of Bioengineering, University of California, Berkeley BRITE REU, University of California, Riverside

II. Methodology

Page 8: Anand Kesavaraju Department of Bioengineering, University of California, Berkeley BRITE REU, University of California, Riverside

Trapping Force Calibration Materials:1. DMEM Complete Media (Dulbecco’s Modified Eagle Medium with FBS and

Penicillin/Strep.) Serum-enriched2. Invitrogen™ Fluorescent Sulfate-Modified Beads (2 µm radius)3. Piezoelectric stage4. Power Meter

Calibration procedure:1. Pass DMEM media through a trapped bead using a piezoelectric stage at

various velocities (in µm/s) at various output power measurements (W)2. Measure the velocity when the bead is dislodged from the trap.3. Use Stokes’ Law to calculate the Escaping Force (pN)

Fd= 6πηRV Where Fd = Viscous Drag Force, η = Viscosity, R = Radius of the Bead, and V = Escaping Velocity

Page 9: Anand Kesavaraju Department of Bioengineering, University of California, Berkeley BRITE REU, University of California, Riverside

Here, the diagram illustrates the bead becoming dislodged from the trap.

Page 10: Anand Kesavaraju Department of Bioengineering, University of California, Berkeley BRITE REU, University of California, Riverside
Page 11: Anand Kesavaraju Department of Bioengineering, University of California, Berkeley BRITE REU, University of California, Riverside

This calibration graph will be

used to convert the output

power into the tether force.

Page 12: Anand Kesavaraju Department of Bioengineering, University of California, Berkeley BRITE REU, University of California, Riverside

HEK 293 cells should be passaged when the flask/plate is ~80% confluenced.

DMEM Complete Medium and trypsin should be heated in a water bath for ~30 minutes before use to prevent thermal shock for the cells.

To passage: Old media should be removed from the flask/plate Cells should be washed with FBS to remove all of the old media, then FBS

should be removed 500 µL to 1 mL of trypsin should be added to the plate/flask, and should then

be incubated for 1-2 minutes Clusters of cells should be broken apart using both physical taps as well as

rapid sucking in-and-out of 5 mL of new medium from the plate/flask. Medium and trypsin in the plate/flask should be pipetted into another

container, then distributed in different concentrations for different types of containers.

Page 13: Anand Kesavaraju Department of Bioengineering, University of California, Berkeley BRITE REU, University of California, Riverside

3 mM and 5 mM concentrations.

Cholesterol depleted using M-β-CD (Methyl-Beta-Cyclodextrin)

Cholesterol enriched using water-soluble cholesterol obtained from Sigma-Aldrich™ in the form of cholesterol carrier – 51 mg cholesterol / 1 g of material.

The prepared media are vortexed for 3-4 minutes, followed by incubation for 30 minutes (37°C at 5% CO2) before experimentation.

Page 14: Anand Kesavaraju Department of Bioengineering, University of California, Berkeley BRITE REU, University of California, Riverside

Step 1

Step 2

Step 3

Step 4

Page 15: Anand Kesavaraju Department of Bioengineering, University of California, Berkeley BRITE REU, University of California, Riverside

III. Results

Page 16: Anand Kesavaraju Department of Bioengineering, University of California, Berkeley BRITE REU, University of California, Riverside

Very clear correlation: As cholesterol is depleted,

the tether force increases, and as

cholesterol is enriched, the tether force

decreases.

The means are also statistically significantly

different.

Page 17: Anand Kesavaraju Department of Bioengineering, University of California, Berkeley BRITE REU, University of California, Riverside

Still somewhat linear, but less

correlated

Page 18: Anand Kesavaraju Department of Bioengineering, University of California, Berkeley BRITE REU, University of California, Riverside

No clear correlation

visible.

Page 19: Anand Kesavaraju Department of Bioengineering, University of California, Berkeley BRITE REU, University of California, Riverside

IV. Conclusions

Page 20: Anand Kesavaraju Department of Bioengineering, University of California, Berkeley BRITE REU, University of California, Riverside

The tether forces increase as the cholesterol is depleted, and vice versa.

The order of tether forces is:

Cholesterol-Depleted > Untreated > Cholesterol-Enriched

Statistically significant results

Also, the higher the concentration, the stronger the effect in either direction is – the elastic regime becomes more dominant as concentration increases.

Page 21: Anand Kesavaraju Department of Bioengineering, University of California, Berkeley BRITE REU, University of California, Riverside

With no delay, the elastic regime more accurately portrays the peak tether forces.

As the viscous regime takes over, the tether forces are much lower, and are much less correlated.

This means that the viscous component of force is more dominant over time.

Page 22: Anand Kesavaraju Department of Bioengineering, University of California, Berkeley BRITE REU, University of California, Riverside
Page 23: Anand Kesavaraju Department of Bioengineering, University of California, Berkeley BRITE REU, University of California, Riverside

Testing different tether pulling velocities.

Dynamic Force measurement.

Quantifying amount of cholesterol present.

Page 24: Anand Kesavaraju Department of Bioengineering, University of California, Berkeley BRITE REU, University of California, Riverside

VI. Acknowledgements

Page 25: Anand Kesavaraju Department of Bioengineering, University of California, Berkeley BRITE REU, University of California, Riverside

N. Khatibzadeh Dr. Sharad Gupta O.S. Beane Professor B. Anvari Anvari Lab J. Wang National Science Foundation

Thanking:

Page 26: Anand Kesavaraju Department of Bioengineering, University of California, Berkeley BRITE REU, University of California, Riverside

Thanks for your time.