genomics: whole genome, whole exome & targeted (re
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Genomics: whole genome, whole
exome & targeted (re)sequencing Department of Molecular
Genetics
Variant annotation & prioritization Data visualization, quality assessment, … variant impact
(e.g. miRNA)
Transcriptomics Department of Molecular
Genetics Total mRNA
HiSeq2000
PE sequencing data
Quality control Fastqc, RSeQC
Adapter and quality
trimming Trimmomatic
Alignment Tophat, Star, Gsnap
Omics data mining & integration Department of Molecular
Genetics
JBrowse - Visual database for SNV and RNA Seq Clustering, pathway mining, ...
Data management & automation Department of Molecular
Genetics
In house LIMS system
Server management Data storage & backup Pedigree visualization
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