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GCxGC: Theory, Practice GCxGC: Theory, Practice and Optimizationand Optimizationand Optimizationand Optimization

Pete Stevens

Life Science & Chemical Analysis Centre

St. Joseph, Michigan, USA

Presentation OutlinePresentation Outline• An Introduction to GCxGC• An Introduction to GCxGC

– What is GCxGC?– GCxGC Hardware– Interpreting GCxGC Chromatograms

• Optimization of a GCxGC SeparationOptimization of a GCxGC Separation

• Applications– Advanced Data Processing

• Classifications• Scriptingp g

3

What is GCxGC?What is GCxGC?Multi-Dimensional Gas ChromatographyMulti-Dimensional Gas Chromatography

– 2DGC vs. GCxGC• 2DGC

– Heart-Cutting– Heart-Cutting» Diverting a portion of effluent from a column onto a column of

a different stationary phase– Multiple Columns

» Splitting the effluent from a column onto multiple columns of differing stationary phases

GCxGC (Comprehensive Two dimensional Gas Chromatography)• GCxGC (Comprehensive Two-dimensional Gas Chromatography)– Comprehensive

» All material that enters the 1st dimension column passes through the 2nd dimension column to the same detectorg

– Uses a “Modulator” to partition 1st column effluent as discrete plugs onto the 2nd dimension column

4

HeartHeart--cutting (2DGC)cutting (2DGC)

Detector “A”Stationary Phase “A”

Inlet Stationary Phase “A”

Detector “B”Stationary Phase “B”

5

HeartHeart--cutting (2DGC)cutting (2DGC)

Detector “A”Stationary Phase “A”

Inlet Stationary Phase “A”

Detector “B”Stationary Phase “B”

6

HeartHeart--cutting (2DGC)cutting (2DGC)

Detector “A”Stationary Phase “A”

Inlet Stationary Phase “A”

Detector “B”Stationary Phase “B”

7

HeartHeart--cutting (2DGC)cutting (2DGC)

Detector “A”Stationary Phase “A”

Inlet Stationary Phase “A”

Detector “B”Stationary Phase “B”

8

HeartHeart--cutting (2DGC)cutting (2DGC)

DetectorDetector

Detector “A”

Detector “B”

9

HeartHeart--Cut 2DGCCut 2DGC

• Each column requires an independent detector

• Each Heart-Cut must be targeted at a specific coelution

• Two data files

10

Capillary GC SchematicCapillary GC Schematic

11

Thermally Modulated GCxGC SchematicThermally Modulated GCxGC Schematic

Column JunctionColumn Junction

12

Simplified GCxGC FlowSimplified GCxGC Flow

DetectorModulatorInlet

1st Dimension Column 2nd Dimension Column

13

ModulationModulationModulator has two functions in GCxGC:• Modulator has two functions in GCxGC:

1) Collect and focus segments of effluent from the primary columncolumn

2) Act as the injector for the secondary column

14

Focusing in the Thermal ModulatorFocusing in the Thermal Modulator

Cold Zone

Relatively Broad 1st Dimension Analyte Band

1st Dimension Column 2nd Dimension Column

15

Focusing in the Thermal ModulatorFocusing in the Thermal Modulator

1st Dimension Column 2nd Dimension Column

16

Focusing in the Thermal ModulatorFocusing in the Thermal Modulator

17

Focusing in the Thermal ModulatorFocusing in the Thermal Modulator

18

Focusing in the Thermal ModulatorFocusing in the Thermal Modulator

19

Focusing in the Thermal ModulatorFocusing in the Thermal Modulator

20

Focusing in the Thermal ModulatorFocusing in the Thermal Modulator

21

Focusing in the Thermal ModulatorFocusing in the Thermal Modulator

22

Focusing in the Thermal ModulatorFocusing in the Thermal Modulator

23

Focusing in the Thermal ModulatorFocusing in the Thermal Modulator

24

Focusing in the Thermal ModulatorFocusing in the Thermal Modulator

Hot Zone

25

Focusing in the Thermal ModulatorFocusing in the Thermal Modulator

26

Focusing in the Thermal ModulatorFocusing in the Thermal Modulator

27

Detector Requirements for GCxGCDetector Requirements for GCxGCQuantitation requires a minimum of 10 data points across aQuantitation requires a minimum of 10 data points across a

peak in order to define it

50 ms peak width at base

Need 10 data points / peak

5 ms between data points5 ms between data points

Minimum Required Sampling Rate:

50 ms

200 Hz 200 Hz for a 50 ms wide peak

28

Volatility RangeVolatility RangeGood Peak Shape and Width over Wide Volatility RangeGood Peak Shape and Width over Wide Volatility Range

Maximum columntemperature toolow for fast elutionand a narrowpeak

29

GCxGC HardwareGCxGC Hardware

Dual-Stage Quad-jet Thermal Modulator

• Utilizes LN2 or a Closed-loop Chiller for Cooling

• Utilizes an Secondary Oven for Independent Temperature Control of the Individual Columns

• Modulation Occurs on the Beginning of the 2nd Dimension Column• Modulation Occurs on the Beginning of the 2nd Dimension Column

30

LECO’s DualLECO’s Dual--stage Quad Jet Thermal Modulatorstage Quad Jet Thermal Modulator

Stage 2

COLD JETSCOLD JETSHOT JETSHOT JETS

g

HOT JETSHOT JETS

Stage 1g

31

LECO’s GCxGCLECO’s GCxGCPrimary Column

Secondary Oven

Primary Column

Secondary Oven

S d C lSecondary Column

Modulator

32

GCGC××GC: DualGC: Dual--stage Quadstage Quad--jet Thermal Modulationjet Thermal Modulation

1st Dimension Column 2nd Dimension Column

1 2

Hot Jets

1 2

1 2

Cold Jets

33

GCGC××GC: DualGC: Dual--stage Quadstage Quad--jet Thermal Modulationjet Thermal Modulation

1st Dimension Column 2nd Dimension Column

1 2

Hot Jets

1 2

1 2

Cold Jets

34

GCGC××GC: DualGC: Dual--stage Quadstage Quad--jet Thermal Modulationjet Thermal Modulation

1st Dimension Column 2nd Dimension Column

1 2

Hot Jets

1 2

1 2

Cold Jets

35

GCGC××GC: DualGC: Dual--stage Quadstage Quad--jet Thermal Modulationjet Thermal Modulation

1st Dimension Column 2nd Dimension Column

1 2

Hot Jets

1 2

1 2

Cold Jets

36

GCGC××GC: DualGC: Dual--stage Quadstage Quad--jet Thermal Modulationjet Thermal Modulation

1st Dimension Column 2nd Dimension Column

1 2

Hot Jets

1 2

1 2

Cold Jets

37

GCGC××GC: DualGC: Dual--stage Quadstage Quad--jet Thermal Modulationjet Thermal Modulation

1st Dimension Column 2nd Dimension Column

1 2

Hot Jets

1 2

1 2

Cold Jets

38

GCGC××GC: DualGC: Dual--stage Quadstage Quad--jet Thermal Modulationjet Thermal Modulation

1st Dimension Column 2nd Dimension Column

1 2

Hot Jets

1 2

1 2

Cold Jets

39

GCGC××GC: DualGC: Dual--stage Quadstage Quad--jet Thermal Modulationjet Thermal Modulation

1st Dimension Column 2nd Dimension Column

1 2

Hot Jets

1 2

1 2

Cold Jets

40

GCGC××GC: DualGC: Dual--stage Quadstage Quad--jet Thermal Modulationjet Thermal Modulation

1st Dimension Column 2nd Dimension Column

1 2

Hot Jets

1 2

1 2

Cold Jets

41

GCGC××GC: DualGC: Dual--stage Quadstage Quad--jet Thermal Modulationjet Thermal Modulation

1st Dimension Column 2nd Dimension Column

1 2

Hot Jets

1 2

1 2

Cold Jets

42

GCGC××GC: DualGC: Dual--stage Quadstage Quad--jet Thermal Modulationjet Thermal Modulation

1st Dimension Column 2nd Dimension Column

1 2

Hot Jets

1 2

1 2

Cold Jets

43

GCGC××GC: DualGC: Dual--stage Quadstage Quad--jet Thermal Modulationjet Thermal Modulation

1st Dimension Column 2nd Dimension Column

1 2

Hot Jets

1 2

1 2

Cold Jets

44

GCGC××GC: DualGC: Dual--stage Quadstage Quad--jet Thermal Modulationjet Thermal Modulation

1st Dimension Column 2nd Dimension Column

1 2

Hot Jets

1 2

1 2

Cold Jets

45

GCGC××GC: DualGC: Dual--stage Quadstage Quad--jet Thermal Modulationjet Thermal Modulation

1st Dimension Column 2nd Dimension Column

1 2

Hot Jets

1 2

1 2

Cold Jets

46

GCGC××GC: DualGC: Dual--stage Quadstage Quad--jet Thermal Modulationjet Thermal Modulation

1st Dimension Column 2nd Dimension Column

1 2

Hot Jets

1 2

1 2

Cold Jets

47

GCGC××GC: DualGC: Dual--stage Quadstage Quad--jet Thermal Modulationjet Thermal Modulation

1st Dimension Column 2nd Dimension Column

1 2

Hot Jets

1 2

1 2

Cold Jets

48

GCGC××GC: DualGC: Dual--stage Quadstage Quad--jet Thermal Modulationjet Thermal Modulation

1st Dimension Column 2nd Dimension Column

1 2

Hot Jets

1 2

1 2

Cold Jets

49

GCGC××GC: DualGC: Dual--stage Quadstage Quad--jet Thermal Modulationjet Thermal Modulation

1st Dimension Column 2nd Dimension Column

1 2

Hot Jets

1 2

1 2

Cold Jets

50

GCxGCGCxGC OverviewOverview

• GCxGC is accomplished through a series of rapid, independent 2nd dimension separationsindependent 2 dimension separations

• The modulator serves two functions: focusing sections of g1st dimension column effluent and acting as the injector for the 2nd dimension column

• GCxGC is comprehensive. All material that enters the 1st

column passes through the modulator, the 2nd column and p g ,on to the detector

51

GCxGC OverviewGCxGC Overview

• Primary column separates components based on volatility and also generates wide bandswide bands

• The modulator focuses and re-injects time-fractions of the primary column effluent onto the second column for a second separation

– 5+ modulations per peak

• The second column performs a rapid p pseparation of each injected sample from the modulator based on polarity

– tm ~ 1.0 s for a 1.0m column

52

The GCxGC ProcessThe GCxGC Process

ModulatorInletThe signal as seen by the detector

0 25 I D

Detector

0.25 mm I.D.0.10 mm I.D.

PrimaryColumn

SecondaryColumn

Th ffl t f th i l i f d d t d b th d l t i t di t

2nd

Col

umn

Sep

arat

ion

The effluent from the primary column is focused and segmented by the modulator into a discrete“plug”. Each plug is then injected onto the secondary column by the modulator, where it isseparated. The GCxGC process is a series of independent second column separations.

53

Retention PlaneRetention PlaneTi

me

Ret

entio

n T

men

sion

R2n

dD

im

1st Dimension Retention Time

54

Contour PlotContour Plot

55

Contour PlotContour Plot

56

Surface PlotSurface Plot

57

Features of a GCxGC Contour PlotFeatures of a GCxGC Contour PlotAlkyl-sub PhenanthrenesGCxGC of Raw Diesel

Mor

e Alkyl sub Phenanthrenes

C

GCxGC of Raw Dieselity

Alkyl-sub Napthalenes

C1

C2

Pola

ri(W

ax)

Alkyl-sub Benzenes

C1C2

C3 C4

C1 C2 C3

n-Alkanes

Boiling PointLower Higher

(5% diphenyl)

Less

1

58

Optimizing a GCxGC SeparationOptimizing a GCxGC Separationgg

59

What is an “Orthogonal” Separation?What is an “Orthogonal” Separation?

A separation scheme is orthoganal when twoseparations are performed by mechanisms that arei d d t f thindependent from one another

Example: SDS PAGE → LC

60

What is an “Orthogonal” Separation?What is an “Orthogonal” Separation?In GCxGC an orthoganal separation occurs when theIn GCxGC, an orthoganal separation occurs when theseparation mechanisms of the two columns are independentfrom one another

olar

ityP

Boiling Point

61

In GCxGC, the orthogonality of the column set determineshow efficiently the available chromatographic “real estate” iny g pthe retention plane is used.

eR

eten

tion

Tim

e2n

dD

imen

sion

R

1st Dimension Retention Time

2

62

ORTHOGANAL SEPARATION

Retention PlaneRetention PlaneTi

me

Ret

entio

n T

men

sion

R2n

dD

im

1st Dimension Retention Time

63

Advantages of GCxGCAdvantages of GCxGCPeak CapacityPeak Capacity

( ) ( ) 122/112/1

−⎟⎟⎠

⎞⎜⎜⎝

⎛+Δ

=WW

tSN r ( )∑ +=j

it SNSN 1 = 85 peakswhere

⎤⎡tN⎞⎛ Δ t⎥⎦

⎤⎢⎣

⎡+=

m

lastr

s tt

RNCp )(ln

41

( ) ( ) 122/112/1

−⎟⎟⎠

⎞⎜⎜⎝

⎛+Δ

=WW

tSN rX = 2550 peaks

64

Increased Peak Capacity in GCxGCIncreased Peak Capacity in GCxGC

men

sionTheoretical Maximum Peak Capacity

of 2

ndD

imPeak Capacity of 1st Dimension

X

Cap

acity

o

Peak Capacity of 2nd Dimension

Pea

k Peak Capacity of 1st Dimension

Actual Maximum Peak Capacity is Lower

65

Advantages of Thermally Modulated GCxGCAdvantages of Thermally Modulated GCxGC

• Increased detectability resulting from focusing in the modulator

• Increased chromatographic resolution

• Increased peak capacity

66

Parameters Commonly Used In OptimizationParameters Commonly Used In Optimization

• Temperature Program• Temperature Program– Rate of temperature increase for columns

• Column Offset– Temperature difference between 1st dimension column and 2nd

dimension columndimension column

• Modulator Offset – Temperature difference between 2nd dimension column and

modulator hot jets

• Modulation Period– Dwell time of modulation cycle

67

Temperature ProgramTemperature Program

• Increasing the rate of the temperature program will causethe analytes retention time on the primary column tothe analytes retention time on the primary column todecrease.

• GCxGC uses lower temperature program rates so that• GCxGC uses lower temperature program rates so thateach individual second dimension separation occurs under“isothermal” conditions. Having each second dimensionseparation occur under locally isothermal conditions helpsseparation occur under locally isothermal conditions helpsmaintain separation scheme orthoganality. Thisnecessitates that the use of longer modulation periodsrequires lower temperature ramps.

68

Increased Temperature Program RateIncreased Temperature Program Rateim

eet

entio

n Ti

men

sion

Re

2nd

Dim

1st Dimension Retention Time

69

Oven Temperature OffsetOven Temperature Offset

• Increasing the temperature offset between the first and d di i l ill d t ti tisecond dimension columns will decrease retention times

in the second dimension.

• Decreasing the temperature offset between the first and second dimension columns will increase retention times i th d di iin the second dimension.

70

Increasing Temperature OffsetIncreasing Temperature OffsetTi

me

Ret

entio

n T

men

sion

R2n

dD

im

1st Dimension Retention Time

71

Decreasing Temperature OffsetDecreasing Temperature Offset

me

eten

tion

Tien

sion

Re

2nd

Dim

1st Dimension Retention Time

72

Wrap AroundWrap Around

me

eten

tion

Tien

sion

Re

2nd

Dim

1st Dimension Retention Time

73

GCxGC “WrapGCxGC “Wrap--Around”Around”

A B C

74

GCxGC “WrapGCxGC “Wrap--Around”Around”

A1 B1 C1

A2 A3B2 B3

B4C2 C3

75

Modulator OffsetModulator Offset

• The modulator offset describes the difference intemperature between the modulator block (hot jets) andtemperature between the modulator block (hot jets) andthe 2nd dimension oven. Modulator offset relates to theinjector function of the modulator. LECO recommends amodulator offset of at least +15 °C relative to themodulator offset of at least +15 C, relative to thesecondary oven temperature.

• The modulator offset would be increased to assist indesorbing high boilers.

76

Temperature Offsets and ProgrammingTemperature Offsets and Programming

C l M TCol2 Max Temp

°C)

empe

ratu

re (°

Modulator Offset

ColMod

15 °C

Te

Col1

Col2 15 °C

Time

Column Offset

77

Modulation PeriodModulation Period• Increasing modulation period allows for the prevention of

the wrap-around of compounds strongly retained on the2nd dimension. It would also, however, decrease thenumber of slices taken of the 1st dimension peak andincrease the likelihood of overloading the modulator.

• Decreasing the period would increase the number of 1st

dimension slices, but would also increase the likelihoodof wrap-around in the 2nd dimension and decrease theamount of separation obtained on the 2nd dimensioncolumn.

78

Increasing Modulation PeriodIncreasing Modulation Periodio

n Ti

me

on R

eten

td

Dim

ensi

o

1st Dimension Retention Time

2nd

79

Decreasing Decreasing ModulationModulation PeriodPeriod T

ime

Ret

entio

nim

ensi

on

2nd

D

1st Dimension Retention Time

80

Resolution on the xResolution on the x--AxisAxisTi

me

Ret

entio

n m

ensi

on R

6 sec6 sec 6 sec6 sec6 sec 4 sec 4 sec 4 sec4 sec4 sec

2nd

Di

1st Dimension Retention Time

81

Modulation PeriodModulation Period

• The resolution on the x-axis is equal to the modulation period.p

• Compounds that are separated by less than the d l ti i d bi d i th d l tmodulation period are recombined in the modulator.

• A good rule of thumb is that the modulation period should• A good rule of thumb is that the modulation period should be as short as possible while obtaining the necessary separation in the 2nd dimension.

82

GCxGC ApplicationsGCxGC Applications

Environmental

MetabolomicsMetabolomics

Petroleum

83

EnvironmentalEnvironmental

GCxGCGCxGC--TOFMS AnalysisTOFMS Analysisyyofof

PDBE’s and PCB’s in FishPDBE’s and PCB’s in Fish

84

Environmental Environmental –– PBDEs & PCBs in FishPBDEs & PCBs in Fish

85

Environmental Environmental –– PBDEs & PCBs in FishPBDEs & PCBs in Fish

86

Environmental Environmental –– PBDEs & PCBs in FishPBDEs & PCBs in Fish

87

Environmental Environmental –– PBDEs & PCBs in FishPBDEs & PCBs in Fish

88

Environmental Environmental –– PBDEs & PCBs in FishPBDEs & PCBs in Fishtribromodiphenyl ether 5 8 11 14 eicosatetraynoic acidtribromodiphenyl ether 5,8,11,14-eicosatetraynoic acid

dehydroabietic acid methyl ester

3-(4-Methoxyphenyl)-2-propenoic acid 2-ethylhexyl ester

5-heptyldihydro- 2(3H)-furanone

3-(4-Methoxyphenyl)-2-propenoic acid 2-ethylhexyl ester

89

Environmental Environmental –– PBDEs & PCBs in FishPBDEs & PCBs in Fish

tribromodiphenyl ether5,8,11,14-eicosatetraynoic acid

dehydroabietic acid methyl ester

5-heptyldihydro- 2(3H)-furanone

3-(4-Methoxyphenyl)-2-propenoic acid 2-ethylhexyl ester

90

MetabolomicsMetabolomics

GCxGCGCxGC--TOFMS AnalysisTOFMS AnalysisGCxGCGCxGC--TOFMS AnalysisTOFMS Analysisofof

SulfurSulfur--containing Metabolites ofcontaining Metabolites ofSulfurSulfur--containing Metabolites of containing Metabolites of Asparagus in UrineAsparagus in Urine

91

Pre-Asparagus Consumption

92

Post-Asparagus Consumption

93

Post-Asparagus Consumption

94

95

PetroleumPetroleum

GCxGCGCxGC--TOFMS AnalysisTOFMS Analysisyyofof

DieselDiesel

96

Petroleum Petroleum -- DieselDiesel

97

Petroleum Petroleum -- DieselDiesel

~ 3280 Peaks w/ S/N ≥ 100

98

Petroleum Petroleum -- DieselDiesel

99

Petroleum Petroleum -- DieselDiesel

100

Petroleum Petroleum -- DieselDiesel

101

Petroleum Petroleum -- DieselDiesel

102

Petroleum Petroleum -- DieselDiesel

103

Petroleum Petroleum -- DieselDiesel

104

Petroleum Petroleum -- DieselDieselPeak # Name R.T. (s) Classifications UniqueMass S/N Height Area

56 Cyclohexane, 1,1,3-trimethyl- 571.5 , 0.710 Alkanes 69 1301.2 5008.6 26512

57 Cyclohexane, 1-ethyl-2-methyl-, cis- 582.5 , 0.700 Alkanes 55 370.8 2231 11696

58 4-Nonene 593.5 , 0.710 Alkanes 55 183.66 799.83 4643.7

59 Cyclohexane, 1,1,2-trimethyl- 599 , 0.720 Alkanes; Alkenes 55 482.25 2672.9 17540

60 Ethylbenzene 599 , 1.210 C2 Benzenes 91 4394.5 21330 156411

61 Thiophene, 2-ethyl- 599 , 1.400 97 285.33 912.7 7362.1

62 Cyclohexane, 1,1,2-trimethyl- 610 , 0.720 Alkanes; Alkenes 69 194.63 1054.1 7455.4

63 1,2,4,4-Tetramethylcyclopentene 615.5 , 0.770 Alkenes 109 464.77 1275.4 7781

64 Benzene, 1,3-dimethyl- 615.5 , 1.240 C2 Benzenes 106 9223.3 28095 215876

65 Thiophene, 2,5-dimethyl- 615.5 , 1.310 C2 Benzenes 111 153.51 419.06 3456.2

66 Heptane, 3,4-dimethyl- 621 , 0.690 Alkanes 43 157.94 1419.1 8813.9

67 Cyclopentane, 1-methyl-3-(1-methylethyl)- 626.5 , 0.720 Alkanes; Alkenes 55 229.4 2143.6 15653

68 Pentalene, octahydro- 626.5 , 0.810 Alkenes 67 407.51 1439.7 12688

69 Thiophene, 2,4-dimethyl- 626.5 , 1.430 111 332.29 907.17 7555.6

70 2,4-Heptadienal, (E,E)- 632 , 0.830 81 118.5 402.54 3241.6

105

Petroleum Petroleum -- DieselDiesel

106

Petroleum Petroleum -- DieselDiesel

Base Peak = m/z 91, 105 or 119

And

Rank(2) = m/z 134

107

Petroleum Petroleum -- DieselDiesel

1-methyl-3-(1-methylethyl)-benzene

1,2,3,5-tetramethyl-benzene

4-ethyl-1,2-dimethyl-benzene

1-methyl-3-(1-methylethyl)-benzene

1-methyl-4-propyl-benzene

1-methyl-3-propyl-benzene

1 methyl 3 (1 methylethyl) benzene

1 methyl 3 propyl benzene

2-ethyl-1,4-dimethyl-benzene

1-ethyl-2,3-dimethyl-benzene

1-methyl-2-(1-methylethyl)-benzene

1-ethyl-2,4-dimethyl-benzene

108

ConclusionConclusion• GCxGC is a versatile technique that is well suited to the• GCxGC is a versatile technique that is well-suited to the

analysis of complex mixtures

• GCxGC provides benefits over a conventional 1DGC separation including:

I d D t t bilit• Increased Detectability• Increased Chromatographic Resolution• Increased Peak Capacity

• LECO’s ChromaTOF software offers advanced data processing, such as Classifications and Scripting, which g gtake advantage of the structured nature of GCxGC data

109

For More InformationFor More Information

Contact LECO at:

Life Science & Chemical Analysis CentreTelephone: 269-985-5714Telephone: 269 985 5714

Email: sepsci@leco.com@www.leco.com

110

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