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ALMTech Overview Graham Gardner This project is supported by funding from the Australian Government Department of Agriculture and Water Resources as part of its Rural R&D for Profit programme in partnership with Research and Development Corporations, Commercial Companies, State Departments and Universities.

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Page 1: ALMTech Overview - UNECE€¦ · ALMTech Overview Graham Gardner This project is supported by funding from the Australian Government Department of Agriculture and Water Resources

ALMTech Overview

Graham Gardner

This project is supported by funding from the Australian Government Department of Agriculture and WaterResources as part of its Rural R&D for Profit programme in partnership with Research and DevelopmentCorporations, Commercial Companies, State Departments and Universities.

Page 2: ALMTech Overview - UNECE€¦ · ALMTech Overview Graham Gardner This project is supported by funding from the Australian Government Department of Agriculture and Water Resources

Outline

• ALMTech overview

• DEXA update

calibration/repeatability

auditing

cut wt prediction

eating quality prediction

Page 3: ALMTech Overview - UNECE€¦ · ALMTech Overview Graham Gardner This project is supported by funding from the Australian Government Department of Agriculture and Water Resources

ALMTechAdvanced Livestock Measurement

Technologies project

Page 4: ALMTech Overview - UNECE€¦ · ALMTech Overview Graham Gardner This project is supported by funding from the Australian Government Department of Agriculture and Water Resources

Predict quality and amount of final product

Conception Live Animal Carcase Retail Cuts Cooked Product

ValueValueValueValue

Deliverables!

Page 5: ALMTech Overview - UNECE€¦ · ALMTech Overview Graham Gardner This project is supported by funding from the Australian Government Department of Agriculture and Water Resources

Predict quality and amount of final product

Conception Live Animal Carcase Retail Cuts Cooked Product

Hyperspectral

Synergy with Automation

ValueValueValueValue

LMY:

Eating Quality:3D

Im

agin

g

DEXA3D Imaging

MIJ camera

Deliverables!

Page 6: ALMTech Overview - UNECE€¦ · ALMTech Overview Graham Gardner This project is supported by funding from the Australian Government Department of Agriculture and Water Resources

Deliverables!•Predict quality and amount of final product

Conception Live Animal Carcase Retail Cuts Cooked Product

Synergy with Automation

ValueValueValueValue

LMY:

Eating Quality:

Hyperspectral NIR

DEXA 3D Imaging3D Imaging

Commercialise 1 automated offal sorting tech

Commercialise DEXA(5 lamb, 1 beef abattoirs)

Commercialise Porkscan Mk2(2 pork abattoirs)

Commercialise cameras(2 Beef, 2 Lamb abattoirs)

Commercialise 3D imaging(2 beef feedlots)

Standardised Calibration Systems

ICWG(industry calibration working group)

Page 7: ALMTech Overview - UNECE€¦ · ALMTech Overview Graham Gardner This project is supported by funding from the Australian Government Department of Agriculture and Water Resources

•Predict quality and amount of final product

Conception Live Animal Carcase Retail Cuts Cooked Product

ValueValueValueValue

EnhancedBeef MSA

Cuts-basedLamb MSA

NewBreeding

Values

EnhancedProducerFeedback

Systems toimprove

compliance

Cut wtprediction

systems

Profit functionsto optimisecarcase use0

0.02

0.04

0.06

0.08

0.1

0.12

10 15 20 25 30 35

$

Benchmarkingsystems

0

0.02

0.04

0.06

0.08

0.1

0.12

10 15 20 25 30 35

Deploy algorithmsto enable

value based pricing(2 abattoirs)

Data to geneticand industry

databases(10 supply chains)

Commercialise3 new EBVs Support roll-out of

lamb MSA Mk2(2 supply chains)

Deliverables!

Page 8: ALMTech Overview - UNECE€¦ · ALMTech Overview Graham Gardner This project is supported by funding from the Australian Government Department of Agriculture and Water Resources

Timeline – LMY Devices

Lamb

Beef

50%

100%

100%0%

0%

Liv

e

Beef

Lamb

Beef

Lamb

Lamb

Pork

Pork

Scan

0%

0%

50% 100%

100%50%

Ca

rca

se

DE

XA

3D

Im

agin

g

Beef

0% 50% 100%

0% 50% 100%

DE

XA

3D

Im

agin

gM

icro

wave

Lamb

0% 50% 100%

Beef

Beef

E+

VB

CC

-3Lamb

Beef

Mic

row

ave

Page 9: ALMTech Overview - UNECE€¦ · ALMTech Overview Graham Gardner This project is supported by funding from the Australian Government Department of Agriculture and Water Resources

DEXA

Page 10: ALMTech Overview - UNECE€¦ · ALMTech Overview Graham Gardner This project is supported by funding from the Australian Government Department of Agriculture and Water Resources

2D X-Ray for driving robots

Page 11: ALMTech Overview - UNECE€¦ · ALMTech Overview Graham Gardner This project is supported by funding from the Australian Government Department of Agriculture and Water Resources

Nucleus Flock/DEXA

0

5

10

15

20

25

30

35

40

45

10 15 20 25 30 35 40

GR

Tis

sue

De

pth

(m

m)

Hot Standard Carcase Weight (kg)

Nucleus Flock Kill 6 (30/9)

Nucleus Flock Kill 5 (9/9)

Nucleus Flock Kill 4 (5/8)

Nucleus Flock Kill 3 (29/7)

Nucleus Flock Kill 2 (22/7)

Nucleus Flock Kill 1 (24/6)

Page 12: ALMTech Overview - UNECE€¦ · ALMTech Overview Graham Gardner This project is supported by funding from the Australian Government Department of Agriculture and Water Resources

R2=0.92, RMSE=1.31

DEXA predicting CT Fat%

Gardner et al., 2018. Meat Science.

Page 13: ALMTech Overview - UNECE€¦ · ALMTech Overview Graham Gardner This project is supported by funding from the Australian Government Department of Agriculture and Water Resources

Lamb DEXARepeatability

Page 14: ALMTech Overview - UNECE€¦ · ALMTech Overview Graham Gardner This project is supported by funding from the Australian Government Department of Agriculture and Water Resources

Immediate Repeatability

Scan Run - Experiment 1

1 2 3 4 5

23.2a 23.4a 23.2a 23.5a 23.4a

Mean Fat % predictions by scan runDiffering superscript denotes significant difference (P<0.01)

Scan carcases 5 times in a row

Connaughton et al., 2019.

Page 15: ALMTech Overview - UNECE€¦ · ALMTech Overview Graham Gardner This project is supported by funding from the Australian Government Department of Agriculture and Water Resources

CalibrationAdjust for synthetic phantom & air

Page 16: ALMTech Overview - UNECE€¦ · ALMTech Overview Graham Gardner This project is supported by funding from the Australian Government Department of Agriculture and Water Resources

0

5

10

15

20

25

30

35

0 5 10 15 20

Fat

% P

red

icti

on

Fat % Prediction of Wednesday Group

Data Before Adjustment

10

12

14

16

18

20

22

24

26

28

30

10 15 20 25 30

Fat

% P

red

icti

on

Fat % Prediction of Wednesday Group

Data After Adjustment

Wednesday Group

Thursday Group

Friday Group

Repeatability between days

Connaughton et al., 2019.

Page 17: ALMTech Overview - UNECE€¦ · ALMTech Overview Graham Gardner This project is supported by funding from the Australian Government Department of Agriculture and Water Resources

30

40

50

60

70

80

90

30 40 50 60 70 80 90

Bro

okl

yn P

red

icti

on

(%

Le

an)

Bordertown Prediction (% Lean)

Lean % Prediction with no calibration

Repeatability between sites

Connaughton et al., 2019.

Page 18: ALMTech Overview - UNECE€¦ · ALMTech Overview Graham Gardner This project is supported by funding from the Australian Government Department of Agriculture and Water Resources

30

40

50

60

70

80

90

30 40 50 60 70 80 90

Bro

okl

yn P

red

icti

on

(%

Le

an)

Bordertown Prediction (% Lean)

Lean % Prediction After Phantom Calibration

Repeatability between sites

Connaughton et al., 2019.

Page 19: ALMTech Overview - UNECE€¦ · ALMTech Overview Graham Gardner This project is supported by funding from the Australian Government Department of Agriculture and Water Resources

Auditing

DEXA

Page 20: ALMTech Overview - UNECE€¦ · ALMTech Overview Graham Gardner This project is supported by funding from the Australian Government Department of Agriculture and Water Resources

Validation/AuditingAcquire imagesFull system

CalibrationAdjust forSyntheticPhantom

Threshold bone Convert to Tissue% Convert to CT lean, fat, bone

Sets air attenuation at 4095

CalibratedImage

High energyLow energy

ln(ILow/AirAtten)

ln(IHigh/AirAtten) R =

Calc. R values

Wt’d pixel depth

Company Specific Algorithm

Clearfield

AirAtten

CalibratedImage

Page 21: ALMTech Overview - UNECE€¦ · ALMTech Overview Graham Gardner This project is supported by funding from the Australian Government Department of Agriculture and Water Resources

Validation/AuditingAcquire imagesFull system

CalibrationAdjust forSyntheticPhantom

Threshold bone Convert to Tissue% Convert to CT lean, fat, bone

Sets air attenuation at 4095

CalibratedImage

High energyLow energy

ln(ILow/AirAtten)

ln(IHigh/AirAtten) R =

Calc. R values

Wt’d pixel depth

Company Specific Algorithm

Clearfield

AirAtten

CalibratedImage

Synthetic Phantom

Auditor Calibration point

Calibration point

Page 22: ALMTech Overview - UNECE€¦ · ALMTech Overview Graham Gardner This project is supported by funding from the Australian Government Department of Agriculture and Water Resources

Validation/AuditingAcquire imagesFull system

CalibrationAdjust forSyntheticPhantom

Threshold bone Convert to Tissue% Convert to CT lean, fat, bone

Sets air attenuation at 4095

CalibratedImage

High energyLow energy

ln(ILow/AirAtten)

ln(IHigh/AirAtten) R =

Calc. R values

Wt’d pixel depth

Company Specific Algorithm

Clearfield

AirAtten

CalibratedImage

Synthetic Phantom

Auditor

Calibration point

Routine auditingensures calibrated image

Page 23: ALMTech Overview - UNECE€¦ · ALMTech Overview Graham Gardner This project is supported by funding from the Australian Government Department of Agriculture and Water Resources

Validation/AuditingAcquire imagesFull system

CalibrationAdjust forSyntheticPhantom

Threshold bone Convert to Tissue% Convert to CT lean, fat, bone

Sets air attenuation at 4095

CalibratedImage

High energyLow energy

ln(ILow/AirAtten)

ln(IHigh/AirAtten) R =

Calc. R values

Wt’d pixel depth

Company Specific Algorithm

Clearfield

AirAtten

CalibratedImage

Calibration point

CT validation required when:1. New DEXA hardware

2. Altered company algorithm3. Disputes

Page 24: ALMTech Overview - UNECE€¦ · ALMTech Overview Graham Gardner This project is supported by funding from the Australian Government Department of Agriculture and Water Resources

Traits manual

Page 25: ALMTech Overview - UNECE€¦ · ALMTech Overview Graham Gardner This project is supported by funding from the Australian Government Department of Agriculture and Water Resources

Estimating cut weight using DEXA

Page 26: ALMTech Overview - UNECE€¦ · ALMTech Overview Graham Gardner This project is supported by funding from the Australian Government Department of Agriculture and Water Resources

Predicting round & shortloin wtusing HCWT plus DEXAfat value

RMSE = 0.054kg

RMSE = 0.105kg

Page 27: ALMTech Overview - UNECE€¦ · ALMTech Overview Graham Gardner This project is supported by funding from the Australian Government Department of Agriculture and Water Resources

DEXA

Carcase Calculator rework

CT Scanning

DEXA Lean Value = 52

DEXA Lean Value = 48

DEXA Lean Value = 59

Page 28: ALMTech Overview - UNECE€¦ · ALMTech Overview Graham Gardner This project is supported by funding from the Australian Government Department of Agriculture and Water Resources

Wt & DEXA & EQ

Optimise carcase usage

Bone out cost

Cut Retail Values

Cut wt by retail value

Adj for cut market volume

Optimised profitCarcase descisions to

optimise profit

$ $ $$$

Characterisecarcase grades

Page 29: ALMTech Overview - UNECE€¦ · ALMTech Overview Graham Gardner This project is supported by funding from the Australian Government Department of Agriculture and Water Resources

29

Is DEXA relevant to MSA?

Page 30: ALMTech Overview - UNECE€¦ · ALMTech Overview Graham Gardner This project is supported by funding from the Australian Government Department of Agriculture and Water Resources

Lumbar DEXA R STDEV

Lean Meat Yield%

DEXA predicts Overall Liking

10.3 eating

quality units

8.3 eating

quality units

80 lambs 200-300 days old

Anderson et al., 2019. ICOMST

Page 31: ALMTech Overview - UNECE€¦ · ALMTech Overview Graham Gardner This project is supported by funding from the Australian Government Department of Agriculture and Water Resources

Lumbar DEXA R STDEV

Lean Meat Yield%

DEXA predicts Overall Liking

10.3 eating

quality units

8.3 eating

quality units

80 lambs 200-300 days old

Independent of LMY%IMF%

Anderson et al., 2019. ICOMST

Page 32: ALMTech Overview - UNECE€¦ · ALMTech Overview Graham Gardner This project is supported by funding from the Australian Government Department of Agriculture and Water Resources

32

Meat Standards Australia eating quality model

Is DEXA relevant to MSA?

Carcase Wt

IMF

Rib Fat

Maturity

Page 33: ALMTech Overview - UNECE€¦ · ALMTech Overview Graham Gardner This project is supported by funding from the Australian Government Department of Agriculture and Water Resources

33

Meat Standards Australia eating quality model

Is DEXA relevant to MSA?

Page 34: ALMTech Overview - UNECE€¦ · ALMTech Overview Graham Gardner This project is supported by funding from the Australian Government Department of Agriculture and Water Resources

Summary

• ALMTech – 3 more years to

accelerate measurement tech

• DEXA calibrated against CT

• Industry system for auditing

• Predicts cut wt & EQ