a total synthesis of (+)-negamycin through isoxazolidine ... · 2 a total synthesis of...

17
2 A Total Synthesis of (+)-Negamycin through Isoxazolidine Allylation Roderick W. Bates, Rab’iah Nisha Khanizeman, Hajime Hirao, Yu Shan Tay and Patcharaporn Sae-Lao Division of Chemistry and Biological Chemistry, School of Physical and Mathematical Sciences, Nanyang Technological University, 21 Nanyang Link, Singapore 637371 [email protected] 1 H and 13 C NMR spectra. All apectra were recorded in CDCl 3 unless stated otherwise. compound page phthalimide 3 2 hydroxylamine 4 3 hydroxylamine 5 4 methoxyisoxazolidine 6a 5 allyl isoxazolidine 7a 6 carboxylic acid 9 7 hydrazide 11 8 azide 12 9 negamycin 1 10 silyl ether 2b 11 hydroxylamine 3b 12 hydroxylamine 4b 13 hydroxylamine 5b 14 isoxazolidines 6b 15 allyl isoxazolidine 7b 17 Electronic Supplementary Material (ESI) for Organic & Biomolecular Chemistry. This journal is © The Royal Society of Chemistry 2014

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Page 1: A Total Synthesis of (+)-Negamycin through Isoxazolidine ... · 2 A Total Synthesis of (+)-Negamycin through Isoxazolidine Allylation Roderick W. Bates, Rab’iah Nisha Khanizeman,

2

A Total Synthesis of (+)-Negamycin through Isoxazolidine AllylationRoderick W. Bates, Rab’iah Nisha Khanizeman, Hajime Hirao, Yu Shan Tay and Patcharaporn Sae-Lao

Division of Chemistry and Biological Chemistry, School of Physical and Mathematical Sciences, Nanyang Technological University, 21 Nanyang Link, Singapore 637371

[email protected]

1H and 13C NMR spectra. All apectra were recorded in CDCl3 unless stated otherwise.

compound page

phthalimide 3 2

hydroxylamine 4 3

hydroxylamine 5 4

methoxyisoxazolidine 6a 5

allyl isoxazolidine 7a 6

carboxylic acid 9 7

hydrazide 11 8

azide 12 9

negamycin 1 10

silyl ether 2b 11

hydroxylamine 3b 12

hydroxylamine 4b 13

hydroxylamine 5b 14

isoxazolidines 6b 15

allyl isoxazolidine 7b 17

Electronic Supplementary Material (ESI) for Organic & Biomolecular Chemistry.This journal is © The Royal Society of Chemistry 2014

Page 2: A Total Synthesis of (+)-Negamycin through Isoxazolidine ... · 2 A Total Synthesis of (+)-Negamycin through Isoxazolidine Allylation Roderick W. Bates, Rab’iah Nisha Khanizeman,

3

-0.50.00.51.01.52.02.53.03.54.04.55.05.56.06.57.07.58.08.59.0f1 (ppm)

R01080F2ECA400 CDCl3 MAY-27

102030405060708090100110120130140150160170180f1 (ppm)

Phth-Cl-13CPhth-Cl-13C, CDCl3, AV400, JAN-15-2014

19.3

2

35.9

637

.70

38.4

441

.16

41.2

2

76.9

277

.23

77.5

582

.26

85.0

6

118.

8112

3.79

123.

8212

8.67

128.

7912

9.15

132.

1613

2.27

132.

3713

2.75

134.

7613

4.80

164.

39

ClO

O

ON

phthalimide 3

Page 3: A Total Synthesis of (+)-Negamycin through Isoxazolidine ... · 2 A Total Synthesis of (+)-Negamycin through Isoxazolidine Allylation Roderick W. Bates, Rab’iah Nisha Khanizeman,

4

ClO

hydroxylamine 4

H2N

Page 4: A Total Synthesis of (+)-Negamycin through Isoxazolidine ... · 2 A Total Synthesis of (+)-Negamycin through Isoxazolidine Allylation Roderick W. Bates, Rab’iah Nisha Khanizeman,

5

-0.50.00.51.01.52.02.53.03.54.04.55.05.56.06.57.07.58.0f1 (ppm)

CBZ-Cl-02ECA400SL CDCl3 JAN-15-2014

30405060708090100110120130140150160170f1 (ppm)

CBZ-Cl-13C-2ECA400SL CDCl3 JAN 16-2014

34.8

1

43.9

3

67.9

2

76.7

777

.09

77.2

977

.41

83.9

0

118.

5812

8.47

128.

4812

8.49

128.

6512

8.70

128.

7112

8.72

128.

7312

8.74

132.

8613

5.41

157.

82

ClO

HN

OO

hydroxylamine 5

Page 5: A Total Synthesis of (+)-Negamycin through Isoxazolidine ... · 2 A Total Synthesis of (+)-Negamycin through Isoxazolidine Allylation Roderick W. Bates, Rab’iah Nisha Khanizeman,

6

-0.50.00.51.01.52.02.53.03.54.04.55.05.56.06.57.07.58.08.5f1 (ppm)

OECA400SL CDCl3 MARCH-11

3035404550556065707580859095100105110115120125130135140145150155160165170f1 (ppm)

MeO-13C

39.0

739

.25

39.3

243

.63

44.6

744

.79

56.0

356

.29

68.5

5

76.8

877

.20

77.4

077

.52

80.0

780

.80

90.2

991

.21

128.

3412

8.52

128.

6912

8.80

128.

8313

5.62

145.

71

157.

03

MeOCl

ON

methoxyisoxazolidines 6a

O

O

Page 6: A Total Synthesis of (+)-Negamycin through Isoxazolidine ... · 2 A Total Synthesis of (+)-Negamycin through Isoxazolidine Allylation Roderick W. Bates, Rab’iah Nisha Khanizeman,

7

0.00.51.01.52.02.53.03.54.04.55.05.56.06.57.07.58.0f1 (ppm)

RSAK1RSAK1, 1HAV 400 MHz CDCl3 JULY-17

2030405060708090100110120130140150160170f1 (ppm)

RSAK1-13CRSAK1-13CAV 400 MHz CDCl3 JULY-17

36.73

39.14

44.54

58.67

68.25

76.88

77.20

77.52

80.17

118.41

128.48

128.57

128.75

133.79

135.92

157.70

ClON

allyl isoxazolidine 7a

O

O

Page 7: A Total Synthesis of (+)-Negamycin through Isoxazolidine ... · 2 A Total Synthesis of (+)-Negamycin through Isoxazolidine Allylation Roderick W. Bates, Rab’iah Nisha Khanizeman,

8

0.00.51.01.52.02.53.03.54.04.55.05.56.06.57.07.58.08.5f1 (ppm)

CHECK COOHCHECK COOH, AV400, CDCl3, AUG-12-2013

2030405060708090100110120130140150160170180190200f1 (ppm)

COOH-13ECA400SL CDCl3 AUG-12-2013

37.5

938

.95

44.2

8

55.7

4

68.4

6

76.7

777

.09

77.4

179

.93

128.

4512

8.60

128.

7013

5.50

157.

37

174.

68

ClON

O

O

OHO

carboxylic acid 9

Page 8: A Total Synthesis of (+)-Negamycin through Isoxazolidine ... · 2 A Total Synthesis of (+)-Negamycin through Isoxazolidine Allylation Roderick W. Bates, Rab’iah Nisha Khanizeman,

9

-1.0-0.50.00.51.01.52.02.53.03.54.04.55.05.56.06.57.07.58.08.59.0f1 (ppm)

R01277F2ECA400SL CDCl3 APRIL 30

102030405060708090100110120130140150160170180190f1 (ppm)

R01273F2-13CECA400 CDCl3 APRIL17

14.2

8

21.1

3

36.9

337

.20

39.7

944

.05

44.5

056

.90

57.6

360

.48

66.7

166

.87

68.2

268

.45

76.7

877

.09

77.3

077

.41

80.0

680

.26

128.

4612

8.51

128.

6112

8.65

128.

6912

8.77

128.

8213

5.09

135.

2513

5.49

157.

65

167.

8017

0.54

ClON

Cbz

NH

ON

O

MeO

hydrazide 11

Page 9: A Total Synthesis of (+)-Negamycin through Isoxazolidine ... · 2 A Total Synthesis of (+)-Negamycin through Isoxazolidine Allylation Roderick W. Bates, Rab’iah Nisha Khanizeman,

10

0.00.51.01.52.02.53.03.54.04.55.05.56.06.57.07.58.0f1 (ppm)

R02015F2R02015F2, AV 400, CDCl3 JULY-15

30405060708090100110120130140150160170180f1 (ppm)

AZIDE-13CAZIDE-13C, CDCl3, AV400, JAN-15-2014

N3ON

Cbz

NH

ON

O

MeO

azide 12

Page 10: A Total Synthesis of (+)-Negamycin through Isoxazolidine ... · 2 A Total Synthesis of (+)-Negamycin through Isoxazolidine Allylation Roderick W. Bates, Rab’iah Nisha Khanizeman,

11

1.21.41.61.82.02.22.42.62.83.03.23.43.63.84.04.24.44.64.85.05.2f1 (ppm)

R02023F2-CONC-3R02023F2-CONC-3 BBF01 CDCl3 AUG-02

30405060708090100110120130140150160170180f1 (ppm)

R02023F2-CONC-13CR02023F2-CONC-13C BBF01 CDCl3 AUG-02

39.5

941

.16

43.8

444

.94

45.2

2

60.8

9

65.7

8

170.

85

177.

09

spectra recorded in D2O

NH2OHNH2

NH

ONMe

HO

O

negamycin 1

Page 11: A Total Synthesis of (+)-Negamycin through Isoxazolidine ... · 2 A Total Synthesis of (+)-Negamycin through Isoxazolidine Allylation Roderick W. Bates, Rab’iah Nisha Khanizeman,

12

-0.50.00.51.01.52.02.53.03.54.04.55.05.56.06.57.07.58.0f1 (ppm)

ys-61-crudeJ400SL cdcl3 16oct13

-20-100102030405060708090100110120130140150f1 (ppm)

ys-grignard OTBS-crudeJ400SL cdcl3 16oct13 13C

-5.3

5-5

.32

18.3

3

25.7

525

.93

37.6

7

66.6

071

.18

76.7

977

.11

77.4

3

117.

40

134.

53

OTBSOH

silyl ether 2b

Page 12: A Total Synthesis of (+)-Negamycin through Isoxazolidine ... · 2 A Total Synthesis of (+)-Negamycin through Isoxazolidine Allylation Roderick W. Bates, Rab’iah Nisha Khanizeman,

13

-1.0-0.50.00.51.01.52.02.53.03.54.04.55.05.56.06.57.07.58.08.5f1 (ppm)

ys-63-pJ400SL cdcl3 17oct13

-100102030405060708090100110120130140150160170180f1 (ppm)

ys-mitsunobu OTBS-pJ400SL cdcl3 17oct13 13C

-5.5

7

18.2

2

25.7

6

34.6

4

64.1

5

76.7

977

.11

77.4

3

87.2

8

117.

9612

3.45

129.

1813

3.28

134.

35

163.

89

OTBSO

O

ON

hydroxylamine 3b

Page 13: A Total Synthesis of (+)-Negamycin through Isoxazolidine ... · 2 A Total Synthesis of (+)-Negamycin through Isoxazolidine Allylation Roderick W. Bates, Rab’iah Nisha Khanizeman,

14

-0.50.00.51.01.52.02.53.03.54.04.55.05.56.06.57.07.58.0f1 (ppm)

ys-66-crudeJ400SL cdcl3 21oct13

-90-80-70-60-50-40-30-20-100102030405060708090f1 (ppm)

ys-NH2+OTBS-crudeJ400SL cdcl3 21oct13 13C

-75.

15

-51.

48

-43.

89

-35.

26

-6.1

2

6.91

7.23

7.55

14.2

2

46.9

9

65.1

3

OTBSO

hydroxylamine 4b

H2N

Page 14: A Total Synthesis of (+)-Negamycin through Isoxazolidine ... · 2 A Total Synthesis of (+)-Negamycin through Isoxazolidine Allylation Roderick W. Bates, Rab’iah Nisha Khanizeman,

15

-0.50.00.51.01.52.02.53.03.54.04.55.05.56.06.57.07.58.08.5f1 (ppm)

ys-68-pJ400SL cdcl3 24oct13

-100102030405060708090100110120130140150160170f1 (ppm)

ys-cbz+OTBS-pJ400SL cdcl3 13C 24oct13

-5.3

0

18.3

5

26.0

0

34.4

1

64.1

867

.53

76.9

177

.23

77.5

5

85.5

2

117.

46

128.

3912

8.48

128.

6813

4.21

135.

88

157.

58

OTBSO

HN

OO

hydroxylamine 5b

Page 15: A Total Synthesis of (+)-Negamycin through Isoxazolidine ... · 2 A Total Synthesis of (+)-Negamycin through Isoxazolidine Allylation Roderick W. Bates, Rab’iah Nisha Khanizeman,

16

-0.50.00.51.01.52.02.53.03.54.04.55.05.56.06.57.07.58.08.5f1 (ppm)

ys-71-p-F2J400SL cdcl3 31oct13

253035404550556065707580859095100105110115120125130135140145150155160165f1 (ppm)

ys-ozonolysis OTBS-F2J400SL cdcl3 01nov13

36.5

2

56.1

0

62.0

9

68.9

2

76.9

177

.23

77.5

581

.70

91.5

0

128.

5912

8.97

135.

3513

5.59

157.

95

MeOOH

ON

O

O

isoxazolidines 6b

Page 16: A Total Synthesis of (+)-Negamycin through Isoxazolidine ... · 2 A Total Synthesis of (+)-Negamycin through Isoxazolidine Allylation Roderick W. Bates, Rab’iah Nisha Khanizeman,

17

-0.50.00.51.01.52.02.53.03.54.04.55.05.56.06.57.07.58.0f1 (ppm)

ys-71-p-F3J400SL cdcl3 31oct13

253035404550556065707580859095100105110115120125130135140145150155160165f1 (ppm)

ys-ozonolysis OTBS-pJ400SL cdcl3 13C 31oct13

36.6

2

56.1

3

62.1

2

68.4

3

76.7

777

.09

77.4

182

.14

91.3

6

128.

2512

8.59

128.

73

157.

22

MeOOH

ON

O

O

isoxazolidines 6b

Page 17: A Total Synthesis of (+)-Negamycin through Isoxazolidine ... · 2 A Total Synthesis of (+)-Negamycin through Isoxazolidine Allylation Roderick W. Bates, Rab’iah Nisha Khanizeman,

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0.00.51.01.52.02.53.03.54.04.55.05.56.06.57.07.58.0f1 (ppm)

ys-73-p-f1-c6d6J400SL c6d6 08nov13

The 1H spectrum was recorded in C6D6 to give better resolution of the signals

OHON

O

O

allyl isoxazolidine 7b