a cellular automata approach to population modeling alexa m. silverman

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A Cellular Automata Approach to Population Modeling Alexa M. Silverman

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Page 1: A Cellular Automata Approach to Population Modeling Alexa M. Silverman

A Cellular Automata Approach to Population Modeling

Alexa M. Silverman

Page 2: A Cellular Automata Approach to Population Modeling Alexa M. Silverman

Purpose To use cellular automata to model

population growth and change To observe the effects of temperature

on the behavior of populations To determine whether a cellular-based

model of population is valid and realistically predicts the behavior of individuals in a population

Page 3: A Cellular Automata Approach to Population Modeling Alexa M. Silverman

Cellular Automata

A cellular automaton is a ‘cell’ on a grid which determines its state (‘live’ or ‘dead’) based on the states of neighboring cells.

2D cellular automata consider all eight neighboring cells.

2D cells with live neighbor counts

Page 4: A Cellular Automata Approach to Population Modeling Alexa M. Silverman

Agent-Based Modeling

• Uses individual ‘agents’ with simple instructions to observe emergent behavior

• Based on interactions between agents• More variable results than mathematical models

Page 5: A Cellular Automata Approach to Population Modeling Alexa M. Silverman

Agent-Based ModelingSome well known models, in NetLogo:

DaisyworldLovelock & Watson

Rabbits Grass Weeds (Predator/Prey)U. Wilensky

AltruismMitteldorf & Wilson

Page 6: A Cellular Automata Approach to Population Modeling Alexa M. Silverman

Life

“Life” notation is written s/b, where numbers on the right side of the slash represent neighbor counts needed to survive and numbers on the left side of the slash represent neighbor counts needed for cell birth.

“34 Life” (34/34) “Conway’s Game of Life” (23/3)

Page 7: A Cellular Automata Approach to Population Modeling Alexa M. Silverman

CA Modeling

The field of cellular automata modeling is still relatively new, but several models have been created.

“Rumor Mill” models spread of a rumor

“Urban Suite – Cells”models growth of cities

Page 8: A Cellular Automata Approach to Population Modeling Alexa M. Silverman

14/3 Population Model

For this model, the rule 14/3 was chosen because it causes cells to grow and move in a pattern resembling the spread of a species (starts localized and becomes more widespread).

14/3 automata suggest two types of individuals: “antisocial” (survives with 1 neighbor) and “social” (survives with 4 neighbors).

Page 9: A Cellular Automata Approach to Population Modeling Alexa M. Silverman

Code and Testing

This program was created in NetLogo because the NetLogo graphics window allows for ‘real time’ view of population growth and change. NetLogo code is object-based, which is ideal for a model where each cell must “know” its state, and the states of its eight surrounding cells.

In test runs, cell population and temperature are graphed. Cell ‘birth rate’ (likelihood of a ‘dead’ cell to come to life) varies quadratically with temperature and temperature varies linearly with changes in population. A highly variable population, therefore, will cause frequent changes in temperature.

Page 10: A Cellular Automata Approach to Population Modeling Alexa M. Silverman

Code and Testing

Population varies as 100 - .25(temperature - 21)^2

Temperature varies as current temp + (1/20)(pop. - last pop.)

made using equationgrapher.com

Page 11: A Cellular Automata Approach to Population Modeling Alexa M. Silverman

NetLogo Interface

Page 12: A Cellular Automata Approach to Population Modeling Alexa M. Silverman

Walls

The “make-wall” button allows the user to draw “walls” around segments of the population. The cells cannot cross these walls.

Page 13: A Cellular Automata Approach to Population Modeling Alexa M. Silverman

Code Sample

Methods to ‘birth’ and ‘kill’ cells

Methods to check if a cell will ‘survive’ or be ‘born’ the next turn

Page 14: A Cellular Automata Approach to Population Modeling Alexa M. Silverman

Results

High initial density causes quick decline in populations, isolation of groups

Page 15: A Cellular Automata Approach to Population Modeling Alexa M. Silverman

Results

Ideal initial density seems to be around 55%

Page 16: A Cellular Automata Approach to Population Modeling Alexa M. Silverman

Results

• With default settings for temperature (21 degrees Celsius) and population density (55%), population and temperature eventually drop off.

• Does this model global warming?

Page 17: A Cellular Automata Approach to Population Modeling Alexa M. Silverman

ResultsThe nature of cellular automata causes each test run to be slightly different even with the same initial parameters. Here are the results of five test runs with default settings:

1 9 17 25 33 41 49 57 65 73 81 89 97 105

113

121

129

137

145

153

161

169

177

185

193

201

209

217

225

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249

257

265

273

281

289

297

305

313

321

329

337

345

0

500

1000

1500

2000

2500

Page 18: A Cellular Automata Approach to Population Modeling Alexa M. Silverman

Java Program

• Will extend capabilities of model due to Java’s object-oriented nature

• Difficulties of Java programming with CA

• Extensions—virus spread modeling?

Page 19: A Cellular Automata Approach to Population Modeling Alexa M. Silverman

Java Program

CellDriver

CellPanel JPanel

extends

Cell

Timer

Grid

ActionListener

Graphics

BufferedImage

class hierarchy

Page 20: A Cellular Automata Approach to Population Modeling Alexa M. Silverman

Sources and Background

Individual-Based Artificial Ecosystems for Design and Optimization by Srinivasa Shivakar Vulli and Sanjeev Agarwal

Using a Genetic Algorithm to Evolve Behavior in Multi-Dimensional Cellular Automata by R. Brukelaar and Th. Back

A Hybrid Agent-Cellular Space Modeling Approach for Fire Spread and Suprression Simulation by Xiolin Hu, Alexandre Muzy, Lewis Ntaimo

Pattern-Oriented Modeling of Agent-Based Complex Systems: Lessons from Ecology by Grimm, Revilla, et al.

Seeing Around Corners by Jonathan Rauch A Brief History of Cellular Automata by Palash Sarkar

Page 21: A Cellular Automata Approach to Population Modeling Alexa M. Silverman

Image Sources on the Web

http://www.anl.govhttp://www.kevlindev.comhttp://ccl.northwestern.edu/netlogo/http://psoup.math.wisc.edu/mcell/http://i.cnn.net