7.dna replication

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    Fundamentals of Cell Biology

    Chapter 7: The Nucleus and DNA

    Replication

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    Chapter foci:

    Examine the anatomy of the nucleus

    Introduction to the protein complexes necessary for

    building, replicating, and maintaining the structureof DNA

    Discussion of mitosis and the importance of the

    cytoskeleton in regulating mitosis

    Chapter Summary: The Big Picture (1)

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    Chapter Summary: The Big Picture (2)

    Section topics:

    The nucleus contains and protects most of a

    eukaryotic cells DNA

    DNA replication is a complex, tightly-regulatedprocess

    Mitosis separates replicated chromosomes

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    The nucleus contains and protects most of

    a eukaryotic cells DNA

    Key Concepts:

    The nucleus is a highly-specialized organelle

    committed primarily to protecting, copying, and

    transcribing DNA.

    The interior of the nucleus is highly

    compartmentalized.

    DNA copying, plus transcribing and splicing of RNA,are accomplished by large, highly-specialized

    molecular complexes.

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    The nuclear envelope is a double

    membrane structure

    the nuclear envelope encloses the

    nucleoplasm

    outer membrane of the nuclear

    envelope is continuous with the ER

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    Nuclear pore complexes regulate

    molecular traffic into and out of the nucleus

    layers of rings stacked

    on top of one another

    that span the nuclear

    membranes, linked tofilamentous protein

    fibrils to form a basket

    structure

    structure undergoescomplex conformational

    changes when it

    transports material into

    and out of the nucleus

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    The interior of the nucleus is highly

    organized and contains subcompartments

    nucleolus contains DNA that

    encodes ribosomal RNAs

    nucleoli are sites of high

    transcriptional activity forrRNA genes

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    The nuclear matrix helps to organize

    chromosomes

    chromosomes are

    compartmentalized into

    regions called chromosome

    territories nuclear matrix helps control

    the shape of chromosomes

    and regulate

    heterochromatin andeuchromatin

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    DNA replication occurs at sites called

    replication factories

    DNA replication factories form large complexes in the

    nucleus devoted to copying DNA with 100%

    accuracy and no breaks

    Replisome is the smallest functional unit in thefactories and are responsible for copying one

    segment of DNA

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    RNA polymerase complexes and

    spliceosomes are distinct structures within

    the nucleus RNA polymerase complexes are responsible for

    transcribing the DNA sequence in genes into

    mRNA, rRNA, tRNA, and other RNAs

    Spliceosomes are responsible for splicing the

    newly synthesized RNAs into their mature form

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    DNA replication is a complex, tightly-

    regulated process Key Concepts (1):

    DNA replication in all organisms is performed by a

    small number of highly-conserved proteins.

    Both prokaryotes and eukaryotes express differentforms of DNA polymerase, the enzyme responsible

    for synthesizing DNA.

    DNA replication begins at specific sites called origins

    of replication. During replication, double-stranded DNA is unwound

    and dissociated into single strands that serve as

    templates for synthesis of complementary DNA

    strands.

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    Key Concepts (2):

    DNA synthesis occurs only in the 5-to-3direction.

    DNA polymerases must bind a double-stranded portion of

    a DNA molecule to begin synthesis. Most often, the double

    strand consists of the template DNA strand and a short,

    complementary RNA primer.

    DNA ligase connects individual pieces of newly

    synthesized DNA to form a complete strand.

    The enzyme telomerase adds extra DNA to the ends of

    chromosomes to protect them from degradation.

    DNA replication is a complex, tightly-

    regulated process

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    DNA polymerases are enzymes that

    replicate DNA

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    DNA polymerases

    DNA polymerases add

    deoxyribonucleotides to

    the 3end of DNA strand

    DNA polymerasesproofread their work

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    DNA replication is semi-discontinuous

    DNA replication begins

    at sites on

    chromosomes called

    origins of replication During replication,

    specialized proteins

    unwind and separate

    the two strands to forma replication fork

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    The replication complex

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    DNA replication is semi-discontinuous

    DNA replication requiresan RNA primer

    leading/lagging strand

    Okazaki fragments DNA ligases join

    fragments of single-

    stranded DNA

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    Replication of DNA at the end of

    chromosomes requires additional steps

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    Cells have two main DNA repair

    mechanisms

    Excision repair systems

    Mismatch repair

    Recombination repair

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    Key Concepts: The function of mitosis is to safely separate

    replicated chromosomes into two daughter cells.

    Mitosis is divided into five phases, based largely onmorphological changes in the location and

    arrangement of chromosomes.

    The microtubule cytoskeleton, including microtubule

    motor proteins, is essential for proper segregation ofchromosomes.

    The actin cytoskeletonis required for the actual

    division of one cell into two daughter cells following

    mitosis.

    Mitosis Separates Replicated

    Chromosomes

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    Mitosis is divided into stages

    1879 - Walther Flemming

    described the motion of what

    he saw under microscope

    asthreads

    (Greek, mitos)

    moving in an actively

    dividing cell

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    Prophase prepares the cell for division

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    Motors contribute to the formation of

    the mature spindle in prophase

    Dynein motor proteins

    Kinesin-related motor proteins

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    Chromosomes attach to the mitotic

    spindle during prometaphase

    Kinetochores attach chromosomes to the mitoticspindle

    A i l f th h t th

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    Arrival of the chromosomes at the

    spindle equator signals the beginning

    of metaphase Metaphase plate = spindle equator

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    Separation of chromatids at the metaphase

    plate occurs during anaphase

    The onset of anaphase requires dissolving the

    connections between sister chromatids

    APC

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    Separation of chromatids at the metaphase

    plate occurs during anaphase

    Anaphase is subdivided into two phases:

    anaphase A

    anaphase B

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    Telophase - Cytokinesis

    The structural rearrangements that occur inprophase begin to reverse during telophase

    Cytokinesis completes mitosis by partitioning the

    cytoplasm to form two new daughter cells

    Fragmentation of non-nuclear organelles

    ensures their equal distribution in the daughter

    cells