2. review of literature -...

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27 2. REVIEW OF LITERATURE Carbohydrates are the most abundant class of biomolecules, making up to 75% of the biomass on Earth. 1 They are used to store energy, but also perform other important functions in the life. 2 Recently, carbohydrates and their derivatives have emerged as an important tool for stereo selective synthesis and as a chiral pool for the design and synthesis of the bioactive molecules. They are also used as chiral building blocks, precursors for drug synthesis and chiral catalysts in asymmetric catalysis. 3-8 The importance of carbohydrates in biological events, the pace of development of carbohydrate based therapeutics has been relatively slow. This is mainly due practical synthetic and analytical difficulty. Recent advances in the field of carbohydrate synthesis, however, have demonstrated that many of these problems can be circumvented, and evidence the importance of carbohydrates as bioactive substances, with regard to antibacterial, antiviral, antineoplastic, antiprotozoal, antifungal activity. 9-15 The Preceeding text gives an overview of the therapeutic activities of carbohydrates. These carbohydrates are generally poly or oligomeric units and have a direct relevance with their core structure, sequence diversity, branching, N or O linkage and overall orientations of hydrophobic and hydrophilic groups present in the macromolecules. The highly interesting research output in cell biology, immunology and biochemistry have help in creating general awarness that carbohydrates contain a considerable amount of regio- and stereochemical information which nature employs in diverse selection and directed distribution process in multicellular organism. The role of monosaccharide derivatives for evoking a specific biological response depends on the number of hydrophobic and hydrophilic groups present on the molecules, number of chiral centre and on

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27

2. REVIEW OF LITERATURE

Carbohydrates are the most abundant class of biomolecules, making up to 75%

of the biomass on Earth.1

They are used to store energy, but also perform other

important functions in the life.2 Recently, carbohydrates and their derivatives

have emerged as an important tool for stereo selective synthesis and as a chiral

pool for the design and synthesis of the bioactive molecules. They are also used

as chiral building blocks, precursors for drug synthesis and chiral catalysts in

asymmetric catalysis.3-8

The importance of carbohydrates in biological events, the

pace of development of carbohydrate based therapeutics has been relatively slow.

This is mainly due practical synthetic and analytical difficulty. Recent advances

in the field of carbohydrate synthesis, however, have demonstrated that many of

these problems can be circumvented, and evidence the importance of

carbohydrates as bioactive substances, with regard to antibacterial, antiviral,

antineoplastic, antiprotozoal, antifungal activity. 9-15

The Preceeding text gives an overview of the therapeutic activities of

carbohydrates. These carbohydrates are generally poly or oligomeric units and

have a direct relevance with their core structure, sequence diversity, branching, N

or O linkage and overall orientations of hydrophobic and hydrophilic groups

present in the macromolecules. The highly interesting research output in cell

biology, immunology and biochemistry have help in creating general awarness

that carbohydrates contain a considerable amount of regio- and stereochemical

information which nature employs in diverse selection and directed distribution

process in multicellular organism. The role of monosaccharide derivatives for

evoking a specific biological response depends on the number of hydrophobic

and hydrophilic groups present on the molecules, number of chiral centre and on

28

the physico-chemical nature of the pharmacophore appendages to the

monosachharide. A survey of the literature indicates that only scanty information

exists about the therapeutic nature of monosaccharide in furanose form. During

initiation of present work it was, therefore, considered desirable to study the

therapeutic properties of furanose form of monosaccharide possessing appropriate

pharmacophores as appendages to the basic skeleton.

Figure 2.1: General Representation of Mannofuranoside and Glucofuranoside

Derivative

O

O O

O

O

O O

O

O

O

OO

Aglycon

Glycon: Mannofuranose Moiety

Aglycon

Glycon: Glucofuranose Moiety

2.1. D-Mannose:

D-mannose is a sugar monomer of the aldohexose series of carbohydrate.

D-mannose is a C-2 epimer of glucose. Mannose is important in human

metabolism, especially in the glycosylation of certain proteins. Several congenital

disorder of glycosylation are associated with mutation of enzymes involved in

mannose metabolism.16

2.1.1. Structure of D-Mannose:

Two of the cyclic mannose anomers possess a pyranose (six-membered)

ring, while the other two possess a furanose (five-membered) ring.

29

Figure 2.2: a; D-Mannose in Fischer projection b; α-D-mannopyranose c; β-D-

mannopyranose d; α-D-mannofuranose e; β-D-mannofuranose

O

OHOH

OH

CH2OH

O

OH

OH

CH2OH

OH

HHO

HHO

OHH

OHH

CH2OH

H

a

b c

OH

HO OH

O

H

HOHO

OH

HO OH

O

H

HOHO

d e

O

OH OH

2.1.2. Aglycon Moiety; Heterocycles:

Heterocycles form the largest group of organic chemistry and have immense

biological importance. For more than a century, heterocycles have constituted one

the largest areas of research in organic chemistry. The presence of heterocycles in

all kinds of organic compounds of interest biology and pharmacology is very well

known. Heteroatoms such as sulfur, nitrogen, oxygen and phosphorus containing

heterocyclic compounds17-19

have widespread therapeutic applications such as

antibacterial, antifungal, antimycobacterial, trypanocidal, anti-HIV activity,

30

antileishmanial agents, genotoxic, antitubercular, antimalarial, herbicidal,

analgesic, antiinflammatory, muscle relaxants anticonvulsant, anticancer and lipid

peroxidation inhibitor, hypnotics, antidepressant, antitumoral, anthelmintic and

insecticidal agents.20-25

Figure 2.3: Various Therapeutic Applications of Heterocyclic Moieties and its

Derivatives

Triazole and other heterocyclic moieties are under study since many years. Its

diversity showing the pharmacological activities is mind blowingly identified

well by the medicinal chemists.26

It shows various therapeutic activities such as

antiinflammatory27

, antimicrobials28

, β‐lactamase inhibitors29

, fungicidal30

,

insecticidal31

, antitumor32

, anticonvulsant33

, antidepressant34

, plant growth

inhibitor.35

Among various triazole and other heterocyclic derivatives, base and

Heterocycles

Antimicrobi

al activity

Antitumor

activity Antifungal

activity

Anti-

inflammatory

activity

Antiviral

activity

Anticonvulsant

activity

Antituberculor

activity

β‐lactamase

inhibitors

Plant growth

inhibitor

31

sugar modified nucleoside derivatives reflect a potent anti‐microbial activity

resulting in its application in the chemotherapy of cancer and viral infection.36

Coumarins occupy an important place in the realm of natural products and

synthetic organic chemistry.37,38

Coumarins comprise a group of natural

compounds found in a variety of plant sources in the form of benzopyrene

derivatives. Coumarins have important effects in plant biochemistry and

physiology, as they act as antioxidants, enzyme inhibitors, and precursors of toxic

substances. In addition, these compounds are involved in the form of plant

growth hormones and growth regulators, control of respiration, photosynthesis, as

well as defense against infections.39

Coumarins have long been recognized to

possess anti-inflammatory, anti-oxidant, anti-allergic, hepatoprotective, anti-

thrombotic, anti-viral and anti-carcinogenic activities.40-42

Hydroxycoumarins are

typical phenolic compounds and therefore, act as potential therapeutic agents

such as metal chelators, free radical scavengers and also extraordinary range of

biochemical and pharmacological activities of these chemicals in mammalian and

other biological systems.43,44

The coumarins are extremely variable in structure, due to the various types of

substitutions in their basic structure, which can influence their biological activity.

The interesting biological activities of the coumarins have made them attractive

targets in organic synthesis.

32

Figure 2.4: Various Therapeutic Applications of Coumarin and its Derivatives

In light of these interesting biological activities of heterocycles, it became

interested in synthesizing some new O-glycosides of substituted heterocyclic

derivatives and evaluating their antimicrobial potential.

2.1.3. O-Glycosylation of 2,3,5,6-bis-O-isopropylidene-α-D-mannofuranose

with Aglycon Moieties:

An efficient anomeric stereocontrolled glycosylation method, with high

yield of α-anomer, was reported recently by using O-glycosyl

trichloroacetamidate as a donor and alcohol as an acceptor in the presence of

catalytic amounts of TMSOTf as Lewis acid.45

Following this synthetic protocol,

2,3,5,6-di-O-isopropylidene-D-mannofuranose was prepared first by the reaction

of D-mannose with acetone in presence of catalytic amount of concentrated

sulfuric acid.46,47

This compound was selected as the glycosyl donor, was then

Coumarin &

its Derivatives

Anti-Inflammatory

Activity

Antibacterial &

Antiviral

Activity

Metal Chelators

Scavenger

Anticlotting &

Antithrombotic

Activity

Anticarcinogenic

Activity Hepatoprotective

Activity

Anti- HIV

Activity

33

coupled with alcohol acceptor of heterocyclic compounds to afford 1-O-(2-

methyl-1H-benzimidazol-1-ylmethyl)-2,3,5,6-di-O-isopropylidene-α-D-

mannofuranoside and 2-Benzothiazolylthioacetyl O-(2,3,5,6-bis-O-

isopropylidene-α-D-mannofuranosyl) L-serinemethyl ester in a good yield.

Figure 2.5: Coupling of 2,3,5,6-bis-O-isopropylidene-D-mannofuranose with

Aglycon moiety in Presence of Trimethylsilyl trifluoromethanesulfonate

(TMSOTf) and Dichloromethane48-50

O

O O

O

O

OH

+N

N

CH3

O

HN CCl3

TMSOTf

CH2Cl2

O

O O

O

O

ON

NH3C

OTMSOTf

CH2Cl2

O OO

O

O

NH

CCl3

N

S

S

O

NH

HO

O

OCH3+O

O OO

O

O

N

S

S

O

NH

O

OCH3

2.2. D-Glucose:

Glucose has 4 chiral centers. In theory, glucose may have 15 optical

stereoisomers. Only seven of them are found in living organisms. When glucose

is in its ring form, an additional asymmetric carbon, the anomeric carbon atom, is

created at C1. This leads to the formation of two ring structures (anomers), α-D-

Glucose and β-D-Glucose. In the form, the hydroxyl group attached to C-1 is

below the plane of the ring, in the β form it is above. The α and β forms

34

interconvert over a timescale of hours in aqueous solution, to a final stable ratio

of α:β 36:64, in a process called mutarotation.

2.2.1. Structure of D-Glucose:

Two of the cyclic glucose anomers possess a pyranose (six-membered)

ring, while the other two possess a furanose (five-membered) ring.

Figure 2.6`: a; D-Glucose in Fischer projection b; α-D-glucopyranose c; β-D-

glucopyranose d; α-D-glucofuranose e; β-D-glucofuranose

OH

OH

HO

O

H

HOHO

OH

OH

HO

O

H

HOHO

O

OH

OHOH

OH

CH2OH

O

OH

OH

OH

CH2OH

OH

OHH

HHO

OHH

OHH

CH2OH

OH

a

b c

d e

35

2.2.2. O-Glycosylation of 1,2,5,6-bis-O-isopropylidene-α-D-glucofuranose

with Aglycon Moieties:

Monosaccharides with good leaving groups like acylate, tosylate and

benzoate play a major role for the introduction of various functional groups, as

building blocks for the formation of di- and oligosaccharide, as chiral pool

materials or for the preparation of bioactive glycoconjugates.51-54

Alkyl and acyl

glycoses and glycoside derivatives of carbohydrates have immense importance

and some of them are biologically active.55

Protection of a particular functional

group of carbohydrates, especially monosaccharides, is not only necessary for the

modification of the remaining functional groups but also for the synthesis of

newer derivatives of great importance.56

Various methods for acylation of

carbohydrates and nucleosides have so far been developed and employed

successfully.57-59

A large number of biologically active compounds possess

aromatic and heteroaromatic nuclei. It is also known that if an active nucleus is

linked to another nucleus, the resulting nucleus may possess enhanced biological

activity.60

The benzene and substituted benzene nuclei play important role as

common denominator for various biological activities, which is also revealed by a

number of previous reports. For example, acylated n-butyl α- and β-D-

glucopyranoside were employed as test chemicals for in vitro antibacterial and

antifungal functionality test against various human pathogenic bacteria and fungi.

The study revealed that the tested n-butyl glucopyranoside derivatives showed

better antimicrobial functionalities as compared to the standard antibiotic.61

Similarly, a number of 2,3-di-O-acyl derivatives of methyl 4-O-acetyl-α-L-

rhamnopyranoside were screened against bacterial and fungal pathogens. The

study revealed that the acylated rhamnopyranoside derivatives are more prone

towards antifungal activities than that of antibacterial activities.62

Synthesis of

36

some acylated monosaccharide derivatives (e.g. D-glucose) in furanose and

pyranose form containing various acyl and aromatic moieties in a single

molecular framework and evaluated their comparative antimicrobial activities

using a variety of bacterial and fungal pathogens.

Figure 2.7: Methyl 4,6-O-benzylidene-α-D-glucopyranoside, Methyl 4,6-O-

benzylidene-α-D-mannopyranoside and a Number of its Derivatives were

Screened for in vitro Antibacterial and Antifugal Activity Against Various

Bacterial and Fungal Strains 63-66

O

R1O

OMe

OR

O

O

Ph

O

RO

OMe

O

O

Ph

OR1

a b

R = R1 = H R = R1 = H

R = Stearoyl, R1 = H R = 4-Cl, Bz; R1 = Ac

R = Stearoyl, R1 = Ac R = 4-Cl, Bz; R1 = Bz

R = Stearoyl, R1 = Bz R = 4-Cl, Bz; R1 = Octanoyl

R = Stearoyl, R1 = pTs R = 4-Cl, Bz; R1 = Decanoyl

Mono-substituted mannofuranose and glucofuranose derivatives were

investigated for their antimicrobial activity against a range of pathogenic bacteria

and fungi.

37

Figure 2.8: Some Acylated Derivatives of benzyl 2,3-O-isopropylidene-α-D-

mannofuranoside and 1,2,5,6-d-O-isopropylidene-α-D-glucofuranose Investigated

for in vitro Antimicrobial Activity Against Various Strains67,68

O

O

O

O

OOR

O

O O

R2O

R1O

OBn

cd

R1 = H; R2 = H R = H

R1 = Myr; R2 = H R = Ms

R1 = Myr; R2 = Ac R = Laur

R1 = Myr; R2 = Bz

Carbohydrate fatty acid ether and esters are another class of fatty acid derivatives

shown a significant activity, and they have broad applications in the food

industry.69-71

They are most commonly employed as surfactants, their

antimicrobial properties have been reported. The use of carbohydrate esters is

continually increasing as they are completely biodegradable, they are not harmful

to the environment and they are non-toxic.72

Another attractive feature of

carbohydrate fatty acid derivatives is the potential to modify their properties by

controlling the degree of substitution of the carbohydrate, by varying the nature

of the fatty acid and also the sugar itself. They are currently being employed in

38

the food, cosmetic and detergent industry.73

Sugar esters are widely used in Japan

as antibacterial agents in canned drinks.

Figure 2.9: Synthesis of Ether and Ester Carbohydrate Derivatives74,75

O

O

O

O

OOH

DMF anhydrous

1-chlorododecaneNaH, 0°C-RT

O

O

O

O

OO

C11H23

O

O

O

O

OOH

Py. anhydrous

DMAP, LauroylChloride, RT

O

O

O

O

OO

C11H23

O

The primary screening of synthesized compounds was done by well diffusion

method. Antimicrobial efficacy of the synthesized compounds was compared

with commercially available compounds such as Ampicillin and fluconazole

which have proven antimicrobial activity. Compounds efficacy was compared

using an absorbance based broth micro dilution assay to determine the Inhibitory

Concentration (IC50).76-85

39

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