12-13 june 2017 uk wellcome genome campus translational ... · ju. 27/10/2016 12:47 156 kb 444 kb...
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Translational BioinformaticsWellcome Genome Campus
UK12-13 June 2017
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Bio-Entity Finder and Relation Extraction
Biomedical databasesText mining
http://ibi.imim.es/befree/
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Source Genes Diseases Associations
Curated 8,948 13,074 130,821
Animal Models 2,300 1,943 6,455
Text mining 16,119 12,604 448,732
All 17,074 20,370 561,119
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Source Variants Diseases Associations
Curated 66,903 6,388 83,582
Text mining 24,455 4,432 57,331
All 83,002 9,169 135,588
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Gene Number of diseases
DisGeNET score DSI Number of
PMIDsNumber of
SNPs
CFTR 308 1 0,948 0,422 1596TGFB1 902 0,433 1 0,314 17DCTN4 83 0,401 1 0,555 2SCNN1B 69 0,293 1 0,573 13SCNN1G 65 0,212 1 0,579 6SCNN1A 64 0,207 0,833 0,581 9TNFRSF1A 318 0,205 1 0,419 1
CLCA4 18 0,204 1 0,709 4STX1A 54 0,200 1 0,598 1
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