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Page 1: 12 1 DNA - BioBlogadamsbiologyblog.weebly.com/uploads/2/3/0/7/23074860/...Avery and DNA Oswald Avery repeated Griffith’s work to determine which molecule was most important for transformation

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Copyright Pearson Prentice Hall: http://www.biologyjunction.com/powerpoints_dragonfly_book_prent.htm

12–1 DNA

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Griffith and Transformation

Griffith and Transformation

In 1928, Fredrick Griffith was trying to learn how

certain types of bacteria caused pneumonia.

He isolated two different strains of pneumonia

bacteria from mice and grew them in his lab.

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Griffith and Transformation

Griffith made two observations:

(1) The disease-causing strain of bacteria grew

into smooth colonies on culture plates.

(2) The harmless strain grew into colonies with

rough edges.

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Griffith and Transformation

Griffith's Experiments

Griffith set up four individual

experiments.

Experiment 1:

• Mice were injected with

the disease-causing strain of

bacteria.

• The mice developed

pneumonia and died.

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Griffith and Transformation

Experiment 2:

• Mice were injected with

the harmless strain of

bacteria.

• These mice didn’t get

sick.

Harmless bacteria

(rough colonies)

Lives

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Griffith and Transformation

Experiment 3:

• Griffith heated the

disease-causing

bacteria.

• He then injected the

heat-killed bacteria into

the mice.

• The mice survived.

Heat-killed disease-

causing bacteria (smooth

colonies)

Lives

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Griffith and Transformation

Experiment 4:

•Griffith mixed his heat-killed, disease-causing bacteria with live, harmless bacteria and injected the mixture into the mice.

•The mice developed pneumonia and died.

Live disease-

causing bacteria

(smooth colonies)

Dies of pneumonia

Heat-killed disease-

causing bacteria

(smooth colonies)

Harmless bacteria

(rough colonies)

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Griffith and Transformation

Griffith concluded

•the heat-killed bacteria passed their disease-causing ability to the harmless strain.

Live disease-

causing bacteria

(smooth colonies)

Heat-killed disease-

causing bacteria

(smooth colonies)

Harmless bacteria

(rough colonies)

Dies of pneumonia

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Griffith and Transformation

Transformation

Griffith called this process transformation

because one strain of bacteria (the harmless strain)

had changed permanently into another (the

disease-causing strain).

Griffith hypothesized that a factor must contain

information that could change harmless bacteria

into disease-causing ones.

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Avery and DNA

Avery and DNA

Oswald Avery repeated Griffith’s work to determine

which molecule was most important for

transformation.

Avery and his colleagues made an extract from the

heat-killed bacteria that they treated with enzymes.

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Avery and DNA

The enzymes destroyed proteins, lipids,

carbohydrates, and other molecules, including the

nucleic acid RNA.

Transformation still occurred.

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Avery and DNA

Avery and other scientists repeated the experiment

using enzymes that would break down DNA.

• When DNA was destroyed, transformation did not

occur.

• Therefore, they concluded that DNA was the

transforming factor.

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Avery and DNA

Avery and other scientists

discovered that the nucleic

acid DNA stores and

transmits the genetic

information from one

generation of an organism to

the next.

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The Hershey-Chase Experiment

The Hershey-Chase Experiment

Alfred Hershey and Martha Chase studied

viruses—nonliving particles smaller than a cell that

can infect living organisms.

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The Hershey-Chase Experiment

Bacteriophages

A virus that infects bacteria is known as a

bacteriophage.

Bacteriophages are composed of a DNA or RNA

core and a protein coat.

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The Hershey-Chase Experiment

They grew viruses in cultures

containing radioactive isotopes

of phosphorus-32 (32P) and

sulfur-35 (35S).

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The Hershey-Chase Experiment

If 35S was found in the bacteria, it would mean that

the viruses’ protein had been injected into the

bacteria.

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The Hershey-Chase Experiment

If 32P was found in the bacteria, then it was the DNA

that had been injected.

Bacteriophage with

phosphorus-32 in DNAPhage infects

bacteriumRadioactivity

inside bacterium

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The Hershey-Chase Experiment

Nearly all the radioactivity in the bacteria

was from phosphorus (32P).

Hershey and Chase concluded that the

genetic material of the bacteriophage

was DNA, not protein.

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The Components and Structure of DNA

The Components and Structure of DNA

DNA is made up of nucleotides.

A nucleotide is a monomer of nucleic acids made

up of:

•Deoxyribose – 5-carbon Sugar

•Phosphate Group

•Nitrogenous Base

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The Components and Structure of DNA

There are four kinds of bases in in DNA:

• adenine

• guanine

• cytosine

• thymine

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12–1 DNA

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The Components and Structure of DNA

Chargaff's Rules

Erwin Chargaff discovered that:

• The percentages of guanine [G] and cytosine

[C] bases are almost equal in any sample of

DNA.

• The percentages of adenine [A] and thymine

[T] bases are almost equal in any sample of

DNA.

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12–1 DNA

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The Components and Structure of DNA

X-Ray Evidence

Rosalind Franklin used X-ray

diffraction to get information

about the structure of DNA.

She aimed an X-ray beam at

concentrated DNA samples

and recorded the scattering

pattern of the X-rays on film.

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The Components and Structure of DNA

The Double Helix

Using clues from Franklin’s pattern, James

Watson and Francis Crick built a model that

explained how DNA carried information and

could be copied.

Watson and Crick's model of DNA was a

double helix, in which two strands were

wound around each other.

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The Components and Structure of

DNA

DNA Double Helix

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The Components and Structure of

DNA

Watson and Crick discovered that hydrogen bonds

can form only between certain base pairs—adenine

and thymine, and guanine and cytosine.

This principle is called base pairing.

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REVIEW CONTENT

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12–1

Avery and other scientists discovered that

a. DNA is found in a protein coat.

b. DNA stores and transmits genetic

information from one generation to the next.

c. transformation does not affect bacteria.

d. proteins transmit genetic information from

one generation to the next.

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12–1

The Hershey-Chase experiment was based on

the fact that

a. DNA has both sulfur and phosphorus in its

structure.

b. protein has both sulfur and phosphorus in

its structure.

c. both DNA and protein have no phosphorus

or sulfur in their structure.

d. DNA has only phosphorus, while protein

has only sulfur in its structure.

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12–1

DNA is a long molecule made of monomers

called

a. nucleotides.

b. purines.

c. pyrimidines.

d. sugars.

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12–1

Chargaff's rules state that the number of

guanine nucleotides must equal the number of

a. cytosine nucleotides.

b. adenine nucleotides.

c. thymine nucleotides.

d. thymine plus adenine nucleotides.

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12–1

In DNA, the following base pairs occur:

a. A with C, and G with T.

b. A with T, and C with G.

c. A with G, and C with T.

d. A with T, and C with T.

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12-2 Chromosomes and DNA Replication

12–2 Chromosomes and DNA Replication

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DNA and Chromosomes

DNA and Chromosomes

In prokaryotic cells, DNA is located in the

cytoplasm.

Most prokaryotes have a single DNA molecule

containing nearly all of the cell’s genetic

information.

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DNA and Chromosomes

Chromosome

E. Coli Bacterium

Bases on the

Chromosomes

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DNA and Chromosomes

Many eukaryotes have 1000 times the

amount of DNA as prokaryotes.

Eukaryotic DNA is located in the cell

nucleus inside chromosomes.

The number of chromosomes varies

widely from one species to the next.

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DNA and Chromosomes

Chromosome Structure

Eukaryotic chromosomes contain DNA and

protein, tightly packed together to form

chromatin.

Chromatin consists of DNA tightly coiled around

proteins called histones.

DNA and histone molecules form nucleosomes.

Nucleosomes pack together, forming a thick

fiber.

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DNA

and

Chromo

somes

Eukaryotic Chromosome Structure

Chromosome

Supercoils

Nucleosome

DNA

double

helix

Histones

Coils

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DNA Replication

DNA Replication

Each strand of the DNA double helix has all

the information needed to reconstruct the

other half by the mechanism of base pairing.

In most prokaryotes, DNA replication begins

at a single point and continues in two

directions.

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DNA Replication

In eukaryotic chromosomes, DNA

replication occurs at hundreds of places.

Replication proceeds in both directions

until each chromosome is completely

copied.

The sites where separation and replication

occur are called replication forks.

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DNA Replication

Duplicating DNA

Before a cell divides, it duplicates its DNA in a

process called replication.

Replication ensures that each resulting cell will

have a complete set of DNA.

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DNA Replication

– During DNA replication, the DNA molecule separates into two strands, then produces two new complementary strands following the rules of base pairing.

– Each strand of the double helix of DNA serves as a template for the new strand.

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DNA Replication

Nitrogen Bases

Replication Fork

DNA Polymerase

Replication Fork

Original strandNew Strand

Growth

Growth

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DNA Replication

How Replication Occurs

DNA replication is carried out by enzymes that

“unzip” a molecule of DNA.

Hydrogen bonds between base pairs are

broken and the two strands of DNA unwind.

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DNA Replication

The principal enzyme involved in DNA

replication is DNA polymerase.

DNA polymerase joins individual

nucleotides to produce a DNA molecule

and then “proofreads” each new DNA

strand.

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12–2

In prokaryotic cells, DNA is found in the

a. cytoplasm.

b. nucleus.

c. ribosome.

d. cell membrane.

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12–2

The first step in DNA replication is

a. producing two new strands.

b. separating the strands.

c. producing DNA polymerase.

d. correctly pairing bases.

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12–2

A DNA molecule separates, and the sequence

GCGAATTCG occurs in one strand. What is the

base sequence on the other strand?

a. GCGAATTCG

b. CGCTTAAGC

c. TATCCGGAT

d. GATGGCCAG

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12–2

In addition to carrying out the replication of DNA,

the enzyme DNA polymerase also functions to

a. unzip the DNA molecule.

b. regulate the time copying occurs in the cell

cycle.

c. “proofread” the new copies to minimize the

number of mistakes.

d. wrap the new strands onto histone proteins.

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12–2

The structure that may play a role in regulating

how genes are “read” to make a protein is the

a. coil.

b. histone.

c. nucleosome.

d. chromatin.

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12-3 RNA and Protein Synthesis

12–3 RNA and Protein Synthesis

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12–3 RNA and Protein

Synthesis

Genes are coded DNA instructions that control

the production of proteins.

Genetic messages can be decoded by copying

part of the nucleotide sequence from DNA into

RNA.

RNA contains coded information for making

proteins.

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The Structure of RNA

The Structure of RNA

There are three main differences between RNA and DNA:

a. The sugar in RNA is ribose instead of

deoxyribose.

b. RNA is generally single-stranded.

c. RNA contains uracil in place of thymine.

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Types of RNA

Types of RNA

There are three main types of RNA:

a. messenger RNA

b. ribosomal RNA

c. transfer RNA

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Types of RNA

Messenger RNA (mRNA) carries copies of

instructions for assembling amino acids

into proteins.

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Types of RNA

Ribosomes are made up of proteins and

ribosomal RNA (rRNA).

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Types of RNA

During protein construction, transfer RNA (tRNA)

transfers each amino acid to the ribosome.

Amino acid

Transfer RNA

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DNA

molecule

DNA strand

(template)

3

TRANSCRIPTION

Codon

mRNA

TRANSLATION

Protein

Amino acid

35

5

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Transcription

DNA is copied in the form of

RNA

This first process is called

transcription.

The process begins at a

section of DNA called a

promoter.

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Transcription

RNA

RNA polymerase

DNA

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RNA Editing

Some DNA within a gene is not needed to

produce a protein. These areas are called

introns.

The DNA sequences that code for proteins are

called exons.

RNA Editing

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The introns are

cut out of RNA

molecules.

The exons are the

spliced together

to form mRNA.

Exon IntronDNA

Pre-mRNA

mRNA

Cap Tail

RNA Editing

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The Genetic Code

The Genetic Code

The genetic code is the “language” of mRNA

instructions.

The code is written using four “letters” (the

bases: A, U, C, and G).

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A codon consists of three consecutive

nucleotides on mRNA that specify a

particular amino acid.

The Genetic Code

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The Genetic Code

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Nucleus

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Translation

Translation

Translation is the decoding of an mRNA

message into a polypeptide chain (protein).

Translation takes place on ribosomes.

During translation, the cell uses information from

messenger RNA to produce proteins.

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Translation

LysinetRNAPhenylalanine

Methionine

Ribosome

mRNAStart codon

The ribosome binds new tRNA molecules

and amino acids as it moves along the

mRNA.

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Translation

Protein Synthesis

tRNA

Ribosome

mRNA

Lysine

Translation direction

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Translation

The process continues until the ribosome

reaches a stop codon.

Polypeptide

Ribosome

tRNA

mRNA

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DNA

mRNA

Protein

CodonCodon Codon

Codon Codon Codon

mRNA

Alanine Arginine Leucine

Amino acids within

a polypeptide

Single strand of DNA

GENES AND PROTIEN

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12–3

The role of a master plan in a building is similar

to the role of which molecule?

a. messenger RNA

b. DNA

c. transfer RNA

d. ribosomal RNA

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12–3

A base that is present in RNA but NOT in DNA is

a. thymine.

b. uracil.

c. cytosine.

d. adenine.

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12–3

The nucleic acid responsible for bringing

individual amino acids to the ribosome is

a. transfer RNA.

b. DNA.

c. messenger RNA.

d. ribosomal RNA.

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12–3

A region of a DNA molecule that indicates to an

enzyme where to bind to make RNA is the

a. intron.

b. exon.

c. promoter.

d. codon.

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A codon typically carries sufficient information to

specify a(an)

a. single base pair in RNA.

b. single amino acid.

c. entire protein.

d. single base pair in DNA.

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12–3

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12-4 Mutations12–4 Mutations

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Kinds of Mutations

Mutations are changes in the genetic

material.

Kinds of Mutations

Mutations that produce changes in a single

gene are known as gene mutations.

Mutations that produce changes in whole

chromosomes are known as chromosomal

mutations.

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Kinds of Mutations

Gene Mutations

Gene mutations involving a change in one or

a few nucleotides are known as point

mutations because they occur at a single

point in the DNA sequence.

Point mutations include substitutions,

insertions, and deletions.

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Kinds of Mutations

Substitutions

usually affect

no more than a

single amino

acid.

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Kinds of Mutations

The effects of insertions or deletions are

more dramatic.

The addition or deletion of a nucleotide

causes a shift in the grouping of codons.

Changes like these are called frameshift

mutations.

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Kinds of Mutations

In an insertion, an

extra base is

inserted into a

base sequence.

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Kinds of Mutations

In a deletion, the loss of a single base is

deleted and the reading frame is shifted.

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Kinds of Mutations

Chromosomal Mutations

Chromosomal mutations involve changes in the

number or structure of chromosomes.

Chromosomal mutations include deletions,

duplications, inversions, and translocations.

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Kinds of Mutations

Deletions involve the loss of all or part of a

chromosome.

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Kinds of Mutations

Duplications produce extra copies of parts of

a chromosome.

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Kinds of Mutations

Inversions reverse the direction of parts of

chromosomes.

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Kinds of Mutations

Translocations occurs when part of one

chromosome breaks off and attaches to another.

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Significance of Mutations

Significance of Mutations

Many mutations have little or no effect on gene

expression.

Some mutations are the cause of genetic

disorders.

Polyploidy is the condition in which an

organism has extra sets of chromosomes.

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12–4

A mutation in which all or part of a chromosome

is lost is called a(an)

a. duplication.

b. deletion.

c. inversion.

d. point mutation.

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12–4

A mutation that affects every amino acid

following an insertion or deletion is called a(an)

a. frameshift mutation.

b. point mutation.

c. chromosomal mutation.

d. inversion.

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12–4

A mutation in which a segment of a chromosome

is repeated is called a(an)

a. deletion.

b. inversion.

c. duplication.

d. point mutation.

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12–4

The type of point mutation that usually affects

only a single amino acid is called

a. a deletion.

b. a frameshift mutation.

c. an insertion.

d. a substitution.

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12–4

When two different chromosomes exchange

some of their material, the mutation is called

a(an)

a. inversion.

b. deletion.

c. substitution.

d. translocation.

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12-5 Gene Regulation

• 12-5 Gene Regulation

Fruit fly chromosome

Fruit fly embryo

Adult fruit fly

Mouse chromosomes

Mouse embryo

Adult mouse

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Gene Regulation: An

Example

• Gene Regulation: An Example

a. E. coli provides an example of how gene

expression can be regulated.

b. An operon is a group of genes that operate

together.

c. In E. coli, these genes must be turned on so

the bacterium can use lactose as food.

d. Therefore, they are called the lac operon.

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Gene Regulation: An

Example

–How are lac genes turned off and on?

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Gene Regulation: An

Example

–The lac genes are turned off by repressors and turned on by the presence of lactose.

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Gene Regulation: An Example

–On one side of the operon's three genes are two regulatory regions.

a. In the promoter (P) region, RNA polymerase

binds and then begins transcription.

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Gene Regulation: An Example

a. The other region is the operator (O).

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Gene Regulation: An Example

–When the lac repressor binds to the O region,

transcription is not possible.

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Gene Regulation: An Example

• When lactose is added, sugar binds to the

repressor proteins.

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Gene Regulation: An Example

• The repressor protein changes shape and

falls off the operator and transcription is

made possible.

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Gene Regulation: An Example

• Many genes are regulated by repressor

proteins.

• Some genes use proteins that speed

transcription.

• Sometimes regulation occurs at the level

of protein synthesis.

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Eukaryotic Gene Regulation

–How are most eukaryotic genes controlled?

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Eukaryotic Gene Regulation

• Eukaryotic Gene Regulation

–Operons are generally not found in

eukaryotes.

–Most eukaryotic genes are controlled

individually and have regulatory sequences that

are much more complex than those of the lac

operon.

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Eukaryotic Gene Regulation

• Many eukaryotic genes have a sequence

called the TATA box.

Promoter

sequences

Upstream

enhancer

TATA

box Introns

Exons

Direction of transcription

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Eukaryotic Gene Regulation

• The TATA box seems to help position

RNA polymerase.

Promoter

sequences

Upstream

enhancer

TATA

boxIntrons

Exons

Direction of transcription

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Eukaryotic Gene Regulation

• Eukaryotic promoters are usually found

just before the TATA box, and consist of

short DNA sequences.

Promoter

sequences

Upstream

enhancer

TATA

boxIntrons

Exons

Direction of transcription

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Eukaryotic Gene Regulation

• Genes are regulated in a variety of ways

by enhancer sequences.

• Many proteins can bind to different

enhancer sequences.

• Some DNA-binding proteins enhance

transcription by:

a. opening up tightly packed chromatin

b. helping to attract RNA polymerase

c. blocking access to genes.

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Development and

Differentiation

• Development and Differentiation

a. As cells grow and divide, they undergo

differentiation, meaning they become

specialized in structure and function.

b. Hox genes control the differentiation of cells

and tissues in the embryo.

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Development and

Differentiation

• Careful control of expression in hox

genes is essential for normal

development.

• All hox genes are descended from the

genes of common ancestors.

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Development and

Differentiation

• Hox Genes

Fruit fly chromosome

Fruit fly embryo

Adult fruit fly

Mouse chromosomes

Mouse embryo

Adult mouse

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12–5

–Which sequence shows the typical organization

of a single gene site on a DNA strand?

a. start codon, regulatory site, promoter, stop

codon

b. regulatory site, promoter, start codon, stop

codon

c. start codon, promoter, regulatory site, stop

codon

d. promoter, regulatory site, start codon, stop

codon

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12–5

– A group of genes that operates together is

a(an)

a. promoter.

b. operon.

c. operator.

d. intron.

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12–5

– Repressors function to

a. turn genes off.

b. produce lactose.

c. turn genes on.

d. slow cell division.

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12–5

–Which of the following is unique to the

regulation of eukaryotic genes?

a. promoter sequences

b. TATA box

c. different start codons

d. regulatory proteins

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12–5

–Organs and tissues that develop in various

parts of embryos are controlled by

a. regulation sites.

b. RNA polymerase.

c. hox genes.

d. DNA polymerase.